diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md deleted file mode 100644 index e925d56..0000000 --- a/CONTRIBUTING.md +++ /dev/null @@ -1,35 +0,0 @@ -# Contributing to the ontology - -There are two ways you can contribute to the ontology: -- Suggesting minor changes to the developers by reporting issues. This is the best option for most people. -- Editing the ontology files directly and submitting a pull request. This requires a more detailed knowledge of ontology development and EMMO guidelines. - -These two options are described below. - -## Suggest minor changes on existing elements - -[Create a feature request](https://github.com/emmo-repo/domain-electrochemistry/issues/new) in a [Github Issue](https://docs.github.com/en/issues/tracking-your-work-with-issues/creating-an-issue) to suggest edits to names, defintions, references on existing classes and properties. - -## Propose additions/deletion of elements - -We recommend using the [forking workflow](https://www.atlassian.com/git/tutorials/comparing-workflows/forking-workflow) to contribute additions/deletions. -Fork this repository, clone the fork on your local PC, create your branch based on the existing `dev` branch (e.g. `dev_john_doe`) and work on the editions in you local copy. - -### Editing the ontology programmatically in python -One is programmatically, using for instance [EMMOntoPy](https://github.com/emmo-repo/EMMOntoPy). - -### Editing the ontology in a graphical user interface (GUI) -[Protégé](https://protege.stanford.edu/) is a widely used graphical development environment for ontologies and knowledge graphs. It is open-source software that is maintained by Stanford University in the United States. - -Before adding elements, ensure Prot´égé is configured to create IRIs in the right format: - -* Open Protégé -* Go to File/Open and load the ontology file you wish to modify -* Go to File/Preferences and there go to the New Entities Tab -* Ensure you have configured the preferences as shown below: - - ![Protege config.](docs/images/protege_config_contribute.png) - Here is the "Specified IRI" for you to copy: ```https://w3id.org/emmo/domain/electrochemistry#``` - -Once you have made your changes, commit them to your fork and [create a pull request](https://docs.github.com/en/pull-requests/collaborating-with-pull-requests/proposing-changes-to-your-work-with-pull-requests/creating-a-pull-request). -* We will assess the request and submit feedback if necessary. If the pull request meets the requirements for inclusion, we will merge it. diff --git a/FAIR.md b/FAIR.md deleted file mode 100644 index 5bbf154..0000000 --- a/FAIR.md +++ /dev/null @@ -1,3 +0,0 @@ -# Guidelines for generating FAIR data - -TBC diff --git a/context.json b/context.json deleted file mode 100644 index 47c854c..0000000 --- a/context.json +++ /dev/null @@ -1,4655 +0,0 @@ -{ - "@context": - { - "": "https://w3id.org/emmo/domain/battery/battery-inferred#", - "brick": "https://brickschema.org/schema/Brick#", - "csvw": "http://www.w3.org/ns/csvw#", - "dc": "http://purl.org/dc/elements/1.1/", - "dcam": "http://purl.org/dc/dcam/", - "dcat": "http://www.w3.org/ns/dcat#", - "dcmitype": "http://purl.org/dc/dcmitype/", - "dcterms": "http://purl.org/dc/terms/", - "doap": "http://usefulinc.com/ns/doap#", - "foaf": "http://xmlns.com/foaf/0.1/", - "geo": "http://www.opengis.net/ont/geosparql#", - "odrl": "http://www.w3.org/ns/odrl/2/", - "org": "http://www.w3.org/ns/org#", - "owl": "http://www.w3.org/2002/07/owl#", - 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