From b178bef9d17a22ea03ec671443e6c0f6ab7452b6 Mon Sep 17 00:00:00 2001 From: emmarousseau Date: Thu, 11 Jul 2024 11:00:37 +0200 Subject: [PATCH] Fix coverage argument's format in config --- src/samtools/samtools_stats/config.vsh.yaml | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/src/samtools/samtools_stats/config.vsh.yaml b/src/samtools/samtools_stats/config.vsh.yaml index 6daccf37..ca630876 100644 --- a/src/samtools/samtools_stats/config.vsh.yaml +++ b/src/samtools/samtools_stats/config.vsh.yaml @@ -29,10 +29,11 @@ argument_groups: Reference file the CRAM was created with. - name: --coverage alternatives: -c - type: string + type: integer + multiple: true description: | - Coverage distribution min;max;step. Default: `1;1000;1`. - example: '1;1000;1' + Coverage distribution min;max;step. Default: [1, 1000, 1]. + example: [1, 1000, 1] - name: --remove_dups alternatives: -d type: boolean_true