From 9b131c9c5272d9bce46e8009c1c7428fcf388cfa Mon Sep 17 00:00:00 2001 From: emmarousseau Date: Mon, 1 Jul 2024 17:35:06 +0100 Subject: [PATCH] Minor formatting changes --- src/samtools/samtools_fastq/config.vsh.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/samtools/samtools_fastq/config.vsh.yaml b/src/samtools/samtools_fastq/config.vsh.yaml index faa1b530..e6436067 100644 --- a/src/samtools/samtools_fastq/config.vsh.yaml +++ b/src/samtools/samtools_fastq/config.vsh.yaml @@ -101,7 +101,7 @@ argument_groups: Do not output alignments with any bits set in INT present in the FLAG field. INT can be specified in hex by beginning with `0x' (i.e. /^0x[0-9A-F]+/) or in octal by beginning with `0' (i.e. /^0[0-7]+/). This defaults to 0x900 representing filtering of secondary and - supplementary alignments. ["0x900"] + supplementary alignments. [0x900] example: "0x900" - name: --incl_flags alternatives: --rf @@ -153,11 +153,11 @@ argument_groups: description: write second index reads to FILE. - name: --barcode_tag type: string - description: Auxiliary tag to find index reads in. ["BC"] + description: Auxiliary tag to find index reads in. [BC] example: "BC" - name: --quality_tag type: string - description: Auxiliary tag to find index quality in. ["QT"] + description: Auxiliary tag to find index quality in. [QT] example: QT - name: --index_format type: string