diff --git a/src/gffread/config.vsh.yaml b/src/gffread/config.vsh.yaml index e4ee2fd3..c7f3d551 100644 --- a/src/gffread/config.vsh.yaml +++ b/src/gffread/config.vsh.yaml @@ -50,7 +50,6 @@ argument_groups: alternatives: -o type: file direction: output - must_exist: false required: true description: | Write the output records into . diff --git a/src/samtools/samtools_flagstat/config.vsh.yaml b/src/samtools/samtools_flagstat/config.vsh.yaml index 20a5e3cd..9b4dfbe1 100644 --- a/src/samtools/samtools_flagstat/config.vsh.yaml +++ b/src/samtools/samtools_flagstat/config.vsh.yaml @@ -28,6 +28,7 @@ argument_groups: description: | File containing samtools stats output. direction: output + required: true example: output.flagstat resources: diff --git a/src/samtools/samtools_idxstats/config.vsh.yaml b/src/samtools/samtools_idxstats/config.vsh.yaml index 781bd8be..d5e32077 100644 --- a/src/samtools/samtools_idxstats/config.vsh.yaml +++ b/src/samtools/samtools_idxstats/config.vsh.yaml @@ -29,7 +29,7 @@ argument_groups: description: | File containing samtools stats output in tab-delimited format. required: true - must_exist: false + direction: output example: output.idxstats resources: