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DESCRIPTION
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DESCRIPTION
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Package: bcTSNE
Type: Package
Title: Projected t-SNE for Batch Correction
Version: 0.11.1
Authors@R: c(person("Dayne L", "Filer",
role = c("aut", "cre"),
email = "[email protected]"),
person("Emanuele", "Aliverti",
role = c("aut"),
email = "[email protected]"),
person("Jeff", "Tilson",
role = c("aut")),
person("Kirk C", "Wilhelmsen",
role = c("aut")),
person("David B", "Dunson",
role = c("aut")))
Maintainer: Dayne L Filer <[email protected]>
Description: Implements the projected t-SNE method for batch correction of
high-dimensional data. Please see Aliverti et al. (2020)
<doi:10.1093/bioinformatics/btaa189> for more information.
Imports:
stats,
RSpectra,
utils,
Rtsne,
graphics,
splatter
Suggests:
data.table,
batchelor,
kBET,
scater,
knitr,
lisi,
harmony,
dlfUtils,
xtable
VignetteBuilder: knitr
SystemRequirements: GNU make
License: GPL-3
Encoding: UTF-8
URL: https://github.com/emanuelealiverti/BC_tSNE
RoxygenNote: 7.1.2
Additional_repositories: https://daynefiler.github.io/drat