Project+Predicting+Employee+Exit+with+Neural+Networks.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "import pandas as pd"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [],
   "source": [
    "hr_data = pd.read_csv('data/HR_comma_sep.csv')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>satisfaction_level</th>\n",
       "      <th>last_evaluation</th>\n",
       "      <th>number_project</th>\n",
       "      <th>average_montly_hours</th>\n",
       "      <th>time_spend_company</th>\n",
       "      <th>Work_accident</th>\n",
       "      <th>left</th>\n",
       "      <th>promotion_last_5years</th>\n",
       "      <th>sales</th>\n",
       "      <th>salary</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0.38</td>\n",
       "      <td>0.53</td>\n",
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       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
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       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>0.11</td>\n",
       "      <td>0.88</td>\n",
       "      <td>7</td>\n",
       "      <td>272</td>\n",
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       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>medium</td>\n",
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       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>0.72</td>\n",
       "      <td>0.87</td>\n",
       "      <td>5</td>\n",
       "      <td>223</td>\n",
       "      <td>5</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>0.37</td>\n",
       "      <td>0.52</td>\n",
       "      <td>2</td>\n",
       "      <td>159</td>\n",
       "      <td>3</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   satisfaction_level  last_evaluation  number_project  average_montly_hours  \\\n",
       "0                0.38             0.53               2                   157   \n",
       "1                0.80             0.86               5                   262   \n",
       "2                0.11             0.88               7                   272   \n",
       "3                0.72             0.87               5                   223   \n",
       "4                0.37             0.52               2                   159   \n",
       "\n",
       "   time_spend_company  Work_accident  left  promotion_last_5years  sales  \\\n",
       "0                   3              0     1                      0  sales   \n",
       "1                   6              0     1                      0  sales   \n",
       "2                   4              0     1                      0  sales   \n",
       "3                   5              0     1                      0  sales   \n",
       "4                   3              0     1                      0  sales   \n",
       "\n",
       "   salary  \n",
       "0     low  \n",
       "1  medium  \n",
       "2  medium  \n",
       "3     low  \n",
       "4     low  "
      ]
     },
     "execution_count": 4,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "hr_data.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [],
   "source": [
    "hr_data.rename(columns={'sales':'department'},inplace=True)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>satisfaction_level</th>\n",
       "      <th>last_evaluation</th>\n",
       "      <th>number_project</th>\n",
       "      <th>average_montly_hours</th>\n",
       "      <th>time_spend_company</th>\n",
       "      <th>Work_accident</th>\n",
       "      <th>left</th>\n",
       "      <th>promotion_last_5years</th>\n",
       "      <th>department</th>\n",
       "      <th>salary</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0.38</td>\n",
       "      <td>0.53</td>\n",
       "      <td>2</td>\n",
       "      <td>157</td>\n",
       "      <td>3</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>0.80</td>\n",
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       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>medium</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>0.11</td>\n",
       "      <td>0.88</td>\n",
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       "      <td>272</td>\n",
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       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>medium</td>\n",
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       "      <th>3</th>\n",
       "      <td>0.72</td>\n",
       "      <td>0.87</td>\n",
       "      <td>5</td>\n",
       "      <td>223</td>\n",
       "      <td>5</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>0.37</td>\n",
       "      <td>0.52</td>\n",
       "      <td>2</td>\n",
       "      <td>159</td>\n",
       "      <td>3</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>sales</td>\n",
       "      <td>low</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   satisfaction_level  last_evaluation  number_project  average_montly_hours  \\\n",
       "0                0.38             0.53               2                   157   \n",
       "1                0.80             0.86               5                   262   \n",
       "2                0.11             0.88               7                   272   \n",
       "3                0.72             0.87               5                   223   \n",
       "4                0.37             0.52               2                   159   \n",
       "\n",
       "   time_spend_company  Work_accident  left  promotion_last_5years department  \\\n",
       "0                   3              0     1                      0      sales   \n",
       "1                   6              0     1                      0      sales   \n",
       "2                   4              0     1                      0      sales   \n",
       "3                   5              0     1                      0      sales   \n",
       "4                   3              0     1                      0      sales   \n",
       "\n",
       "   salary  \n",
       "0     low  \n",
       "1  medium  \n",
       "2  medium  \n",
       "3     low  \n",
       "4     low  "
      ]
     },
     "execution_count": 8,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "hr_data.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from sklearn.preprocessing import LabelEncoder"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 10,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "le = LabelEncoder()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {},
   "outputs": [],
   "source": [
    "hr_data.department = le.fit_transform(hr_data.department)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 13,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "hr_data.salary = le.fit_transform(hr_data.salary)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>satisfaction_level</th>\n",
       "      <th>last_evaluation</th>\n",
       "      <th>number_project</th>\n",
       "      <th>average_montly_hours</th>\n",
       "      <th>time_spend_company</th>\n",
       "      <th>Work_accident</th>\n",
       "      <th>left</th>\n",
       "      <th>promotion_last_5years</th>\n",
       "      <th>department</th>\n",
       "      <th>salary</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0.38</td>\n",
       "      <td>0.53</td>\n",
       "      <td>2</td>\n",
       "      <td>157</td>\n",
       "      <td>3</td>\n",
       "      <td>0</td>\n",
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       "      <td>1</td>\n",
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       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>0.80</td>\n",
       "      <td>0.86</td>\n",
       "      <td>5</td>\n",
       "      <td>262</td>\n",
       "      <td>6</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>7</td>\n",
       "      <td>2</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>0.11</td>\n",
       "      <td>0.88</td>\n",
       "      <td>7</td>\n",
       "      <td>272</td>\n",
       "      <td>4</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>7</td>\n",
       "      <td>2</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>0.72</td>\n",
       "      <td>0.87</td>\n",
       "      <td>5</td>\n",
       "      <td>223</td>\n",
       "      <td>5</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>7</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>0.37</td>\n",
       "      <td>0.52</td>\n",
       "      <td>2</td>\n",
       "      <td>159</td>\n",
       "      <td>3</td>\n",
       "      <td>0</td>\n",
       "      <td>1</td>\n",
       "      <td>0</td>\n",
       "      <td>7</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   satisfaction_level  last_evaluation  number_project  average_montly_hours  \\\n",
       "0                0.38             0.53               2                   157   \n",
       "1                0.80             0.86               5                   262   \n",
       "2                0.11             0.88               7                   272   \n",
       "3                0.72             0.87               5                   223   \n",
       "4                0.37             0.52               2                   159   \n",
       "\n",
       "   time_spend_company  Work_accident  left  promotion_last_5years  department  \\\n",
       "0                   3              0     1                      0           7   \n",
       "1                   6              0     1                      0           7   \n",
       "2                   4              0     1                      0           7   \n",
       "3                   5              0     1                      0           7   \n",
       "4                   3              0     1                      0           7   \n",
       "\n",
       "   salary  \n",
       "0       1  \n",
       "1       2  \n",
       "2       2  \n",
       "3       1  \n",
       "4       1  "
      ]
     },
     "execution_count": 15,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "hr_data.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "#list comprehension - find all the colns except left\n",
    "feature_col = [ col for col in hr_data.columns.tolist() if col != 'left']"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "metadata": {},
   "outputs": [],
   "source": [
    "feature_data = hr_data[feature_col]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 20,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "target_data = hr_data['left']"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 22,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "9"
      ]
     },
     "execution_count": 22,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "len(feature_data.columns.tolist())"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 23,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "import tflearn\n",
    "import tensorflow as tf"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 24,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "[(0, 1), (1, 2), (2, 3)]"
      ]
     },
     "execution_count": 24,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "l = [1,2,3]\n",
    "list(enumerate(l))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 25,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "def dnn_model(num_layers,layer_info):\n",
    "    tf.reset_default_graph()\n",
    "    \n",
    "    #create units for input layer\n",
    "    net = tflearn.input_data(shape=[None,9])\n",
    "    \n",
    "    #create hidden layers\n",
    "    for idx,layer in enumerate(range(1,num_layers+1)):\n",
    "        net = tflearn.fully_connected(net,layer_info[idx],activation='ReLU')\n",
    "    \n",
    "    #create output layer\n",
    "    net = tflearn.fully_connected(net,2,activation='softmax')\n",
    "    net = tflearn.regression(net,optimizer='sgd',learning_rate=0.01, loss='categorical_crossentropy')\n",
    "    \n",
    "    model = tflearn.DNN(net)\n",
    "    return model"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 26,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "model = dnn_model(2,[64,32])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 27,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from sklearn.preprocessing import OneHotEncoder"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 28,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "ohe = OneHotEncoder()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 32,
   "metadata": {},
   "outputs": [],
   "source": [
    "trainY = ohe.fit_transform(target_data.values.reshape(-1,1))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 34,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[ 0.,  1.],\n",
       "       [ 0.,  1.],\n",
       "       [ 0.,  1.],\n",
       "       ..., \n",
       "       [ 0.,  1.],\n",
       "       [ 0.,  1.],\n",
       "       [ 0.,  1.]])"
      ]
     },
     "execution_count": 34,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "#Convert sparse matrix to dense matrix\n",
    "trainY.toarray()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 44,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[ 0.38,  0.53,  2.  , ...,  0.  ,  7.  ,  1.  ],\n",
       "       [ 0.8 ,  0.86,  5.  , ...,  0.  ,  7.  ,  2.  ],\n",
       "       [ 0.11,  0.88,  7.  , ...,  0.  ,  7.  ,  2.  ],\n",
       "       ..., \n",
       "       [ 0.37,  0.53,  2.  , ...,  0.  ,  8.  ,  1.  ],\n",
       "       [ 0.11,  0.96,  6.  , ...,  0.  ,  8.  ,  1.  ],\n",
       "       [ 0.37,  0.52,  2.  , ...,  0.  ,  8.  ,  1.  ]])"
      ]
     },
     "execution_count": 44,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "#Convert pandas into numpy\n",
    "feature_data.as_matrix()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 37,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Training Step: 7449  | total loss: \u001b[1m\u001b[32m0.53828\u001b[0m\u001b[0m | time: 0.337s\n",
      "| SGD | epoch: 050 | loss: 0.53828 - acc: 0.7690 -- iter: 14800/14849\n",
      "Training Step: 7450  | total loss: \u001b[1m\u001b[32m0.53837\u001b[0m\u001b[0m | time: 1.347s\n",
      "| SGD | epoch: 050 | loss: 0.53837 - acc: 0.7691 | val_loss: 0.57430 - val_acc: 0.7400 -- iter: 14849/14849\n",
      "--\n"
     ]
    }
   ],
   "source": [
    "model.fit(feature_data.as_matrix(),trainY.toarray(),validation_set=0.01,show_metric=True, batch_size=100,n_epoch=50)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 38,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "model = dnn_model(2,[8,4])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 39,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Training Step: 7449  | total loss: \u001b[1m\u001b[32m0.53828\u001b[0m\u001b[0m | time: 0.332s\n",
      "| SGD | epoch: 050 | loss: 0.53828 - acc: 0.7710 -- iter: 14800/14849\n",
      "Training Step: 7450  | total loss: \u001b[1m\u001b[32m0.54187\u001b[0m\u001b[0m | time: 1.344s\n",
      "| SGD | epoch: 050 | loss: 0.54187 - acc: 0.7679 | val_loss: 0.51991 - val_acc: 0.7867 -- iter: 14849/14849\n",
      "--\n"
     ]
    }
   ],
   "source": [
    "model.fit(feature_data.as_matrix(),trainY.toarray(),validation_set=0.01,show_metric=True, batch_size=100,n_epoch=50)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 40,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "model = dnn_model(3,[16,8,4])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 41,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Training Step: 7449  | total loss: \u001b[1m\u001b[32m0.55446\u001b[0m\u001b[0m | time: 0.314s\n",
      "| SGD | epoch: 050 | loss: 0.55446 - acc: 0.7571 -- iter: 14800/14849\n",
      "Training Step: 7450  | total loss: \u001b[1m\u001b[32m0.55062\u001b[0m\u001b[0m | time: 1.321s\n",
      "| SGD | epoch: 050 | loss: 0.55062 - acc: 0.7604 | val_loss: 0.51217 - val_acc: 0.7933 -- iter: 14849/14849\n",
      "--\n"
     ]
    }
   ],
   "source": [
    "model.fit(feature_data.as_matrix(),trainY.toarray(),validation_set=0.01,show_metric=True, batch_size=100,n_epoch=50)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 56,
   "metadata": {},
   "outputs": [],
   "source": [
    "res = model.predict_label(feature_data.as_matrix()[0:4])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 59,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([0, 1])"
      ]
     },
     "execution_count": 59,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "ohe.active_features_"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 61,
   "metadata": {},
   "outputs": [],
   "source": [
    "a = pd.Series(data=[5,6,7,6])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 62,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([5, 6, 7, 6])"
      ]
     },
     "execution_count": 62,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "a.values"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 63,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "ohee = OneHotEncoder()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 66,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([[ 1.,  0.,  0.],\n",
       "       [ 0.,  1.,  0.],\n",
       "       [ 0.,  0.,  1.],\n",
       "       [ 0.,  1.,  0.]])"
      ]
     },
     "execution_count": 66,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "ohee.fit_transform(a.values.reshape(-1,1)).toarray()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 67,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "array([5, 6, 7])"
      ]
     },
     "execution_count": 67,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "ohee.active_features_"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  }
 ],
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