-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathindex.html
252 lines (209 loc) · 9.33 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
<!doctype html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="description" content="A workshop on practical skills for reproducible computational sciences">
<title>Reproducible computation sciences</title>
<link rel="stylesheet" href="https://unpkg.com/[email protected]/build/pure-min.css" integrity="sha384-" crossorigin="anonymous">
<!--[if lte IE 8]>
<link rel="stylesheet" href="https://unpkg.com/[email protected]/build/grids-responsive-old-ie-min.css">
<![endif]-->
<!--[if gt IE 8]><!-->
<link rel="stylesheet" href="https://unpkg.com/[email protected]/build/grids-responsive-min.css">
<!--<![endif]-->
<!--[if lte IE 8]>
<link rel="stylesheet" href="css/layouts/blog-old-ie.css">
<![endif]-->
<!--[if gt IE 8]><!-->
<link rel="stylesheet" href="css/layouts/blog.css">
<!--<![endif]-->
</head>
<body>
<div id="layout" class="pure-g">
<div class="sidebar pure-u-1 pure-u-md-1-4">
<div class="header">
<h1 class="brand-title">Reproducible computational sciences</h1>
<h2 class="brand-tagline">Workshop series</h2>
<!--
<nav class="nav">
<ul class="nav-list">
<li class="nav-item">
<a class="pure-button" href="http://purecss.io">Pure</a>
</li>
<li class="nav-item">
<a class="pure-button" href="http://yuilibrary.com">YUI Library</a>
</li>
</ul>
</nav>
-->
</div>
</div>
<div class="content pure-u-1 pure-u-md-3-4">
<div>
<!-- A wrapper for all the blog posts -->
<div class="posts">
<!-- h1 class="content-subhead">Pinned Post</h1 -->
<!-- A single blog post -->
<section class="post">
<header class="post-header">
<h2 class="post-title"> Practical skills for
reproducible computational sciences </h2>
</header>
<div class="post-description">
<p>Come join us for a small workshop on reproducible
computational sciences</p>
<ul>
<li> Day 1. Why computational reproducibility? Data
and code management for
computational reproducibility. </li>
<li> Day 2. Best practices on documenting, testing,
and packaging your code.
</li>
<li> Day 3. Using Git and Github. </li>
<li> Day 4. Using Git and Github. </li>
<li> Day 5. A computationally reproducible lab organization and the computationally reproducible research manuscript</li>
</ul>
</div>
</section>
<section class="post">
<header class="post-header">
<h3 class="post-title"> Day 1. Why computational reproducibility? Data and code
management for computational reproducibility </h3>
</header>
<div class="post-description">
<ul>
<li>How to organize your computational
project</li>
<li>How to share your code</li>
<li>How to share your data</li>
</ul>
</div>
</section>
<section class="post">
<header class="post-header">
<h3 class="post-title">Day 2. Best practices on documenting, testing, & packaging your code.</h3>
</header>
<div class="post-description">
<ul>
<li>Documentation</li>
<li>Testing</li>
<li>Packaging</li>
</ul>
</div>
</section>
<section class="post">
<header class="post-header">
<h3 class="post-title">Day 3. Using git & github (1/2).</h3>
</header>
<div class="post-description">
<ul>
<li>Configuration</li>
<li>Saving snapshots (committing)</li>
<li>Canceling changes, going back in time, etc</li>
</ul>
<a
href="http://members.cbio.mines-paristech.fr/~nvaroquaux/teaching/2015-aspss/git.html">Slides</a>
</div>
</section>
<section class="post">
<header class="post-header">
<h3 class="post-title">Day 4. Using git & github (2/2).</h3>
</header>
<div class="post-description">
<ul>
<li>Branches</li>
<li>Sharing your code with others (via GitHub)</li>
</ul>
</div>
</section>
<section class="post">
<header class="post-header">
<h3 class="post-title">Day 5. A computationally reproducible lab organization and the computationally reproducible research manuscript
</h3>
</header>
<div class="post-description">
<ul>
<li>Automating your code execution with travis-CI</li>
<li>Questions & Answers</li>
</ul>
</div>
</section>
<!--
<h1 class="content-subhead">Recent Posts</h1>
<section class="post">
<header class="post-header">
<img width="48" height="48" alt="Eric Ferraiuolo's avatar" class="post-avatar" src="img/common/ericf-avatar.png">
<h2 class="post-title">Everything You Need to Know About Grunt</h2>
<p class="post-meta">
By <a class="post-author" href="#">Eric Ferraiuolo</a> under <a class="post-category post-category-js" href="#">JavaScript</a>
</p>
</header>
<div class="post-description">
<p>
</p>
</div>
</section>
<section class="post">
<header class="post-header">
<img width="48" height="48" alt="Reid Burke's avatar" class="post-avatar" src="img/common/reid-avatar.png">
<h2 class="post-title">Photos from CSSConf and JSConf</h2>
<p class="post-meta">
By <a class="post-author" href="#">Reid Burke</a> under <a class="post-category" href="#">Uncategorized</a>
</p>
</header>
<div class="post-description">
<div class="post-images pure-g">
<div class="pure-u-1 pure-u-md-1-2">
<a href="http://www.flickr.com/photos/uberlife/8915936174/">
<img alt="Photo of someone working poolside at a resort"
class="pure-img-responsive"
src="http://farm8.staticflickr.com/7448/8915936174_8d54ec76c6.jpg">
</a>
<div class="post-image-meta">
<h3>CSSConf Photos</h3>
</div>
</div>
<div class="pure-u-1 pure-u-md-1-2">
<a href="http://www.flickr.com/photos/uberlife/8907351301/">
<img alt="Photo of the sunset on the beach"
class="pure-img-responsive"
src="http://farm8.staticflickr.com/7382/8907351301_bd7460cffb.jpg">
</a>
<div class="post-image-meta">
<h3>JSConf Photos</h3>
</div>
</div>
</div>
</div>
</section>
<section class="post">
<header class="post-header">
<img width="48" height="48" alt="Andrew Wooldridge's avatar" class="post-avatar" src="img/common/andrew-avatar.png">
<h2 class="post-title">YUI 3.10.2 Released</h2>
<p class="post-meta">
By <a class="post-author" href="#">Andrew Wooldridge</a> under <a class="post-category post-category-yui" href="#">YUI</a>
</p>
</header>
<div class="post-description">
<p>
We are happy to announce the release of YUI 3.10.2! You can find it now on the Yahoo! CDN, download it directly, or pull it in via npm. We’ve also updated the YUI Library website with the latest documentation.
</p>
</div>
-->
</section>
</div>
<div class="footer">
<div class="pure-menu pure-menu-horizontal">
<ul>
<li class="pure-menu-item"><a href="http://purecss.io/" class="pure-menu-link">About</a></li>
<li class="pure-menu-item"><a href="http://twitter.com/yuilibrary/" class="pure-menu-link">Twitter</a></li>
<li class="pure-menu-item"><a href="http://github.com/pure-css/pure/" class="pure-menu-link">GitHub</a></li>
</ul>
</div>
</div>
</div>
</div>
</div>
</body>
</html>