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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["setuptools", "setuptools-scm"]
build-backend = "setuptools.build_meta"
[project]
name = "pysindy"
description = "Sparse Identification of Nonlinear Dynamics"
authors = [
{name="Brian de Silva", email="[email protected]"},
{name="Kathleen Champion", email="[email protected]"},
{name="Markus Quade", email="[email protected]"},
{name="Alan Kaptanoglu", email="[email protected]"}
]
license = {text = "MIT"}
requires-python = ">=3.8"
dynamic = ["version"]
classifiers = [
"Programming Language :: Python",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Science/Research",
"License :: OSI Approved :: MIT License",
"Topic :: Scientific/Engineering :: Mathematics",
]
readme = "README.rst"
dependencies = [
"jax>=0.4,<0.5",
"scikit-learn>=1.1, !=1.5.0",
"derivative>=0.6.2",
"typing_extensions",
]
[project.optional-dependencies]
dev = [
"matplotlib",
"seaborn",
"pytest>=6.2.4, <8.0.0",
"black",
"build",
"pytest-cov",
"pytest-lazy-fixture",
"flake8-builtins-unleashed",
"jupyter",
"jupytext",
"pre-commit",
"hypothesis",
"jupyter-contrib-nbextensions"
]
docs = [
"ipython",
"pandoc",
"sphinx-rtd-theme",
"sphinx==7.1.2",
"sphinxcontrib-apidoc",
"nbsphinx"
]
miosr = [
"gurobipy>=9.5.1,!=10.0.0"
]
cvxpy = [
"cvxpy<1.5",
"scs>=2.1, !=2.1.4"
]
sbr = [
"numpyro",
"arviz==0.17.1",
"scipy<1.13.0"
]
[tool.black]
line-length = 88
force-exclude = '''
\.git
\.mypy_cache
\.venv
.vscode
version.py
build
dist
env
'''
[tool.pytest.ini_options]
filterwarnings = [
"ignore::RuntimeWarning",]
addopts = '-m "not slow and not notebooks"'
markers = ["slow", "notebooks"]
[tool.codespell]
ignore-words-list = "pres,nd,hist"
[tool.setuptools]
packages = ["pysindy"]
[tool.setuptools_scm]
write_to = "pysindy/version.py"
[tool.autopep8]
ignore = ["E731"]