-
Notifications
You must be signed in to change notification settings - Fork 4
/
begin_table_footnotesize_iflatexml_else__13.tex
31 lines (31 loc) · 1.79 KB
/
begin_table_footnotesize_iflatexml_else__13.tex
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
\begin{table}
\footnotesize
\iflatexml\else
\resizebox{\linewidth}{!}{
\fi
\begin{tabular}{ l p{3.5in} c c c }
Name & URL & License & Activity & Citation \\ \hline
AmberTools & \url{http://ambermd.org} & GPL & A1 & \cite{Salomon_Ferrer_2012} \\
LOOS & \url{http://loos.sourceforge.net} & GPL & A1 & \cite{Romo_2014} \\
lsfitpar & \url{http://mackerell.umaryland.edu/~kenno/lsfitpar} & GPL & A2 & \cite{Vanommeslaeghe_2015} \\
MDAnalysis & \url{http://mdanalysis.org} & GPL & A1 & \cite{Michaud_Agrawal_2011} \\
MDTraj & \url{mdtraj.org} & LGPL & A1 & \cite{McGibbon_2015} \\
MEMBPLUGIN & \url {https://sourceforge.net/projects/membplugin} & GPL & C1 & \cite{Guixa-Gonzalez_2014} \\
MEPSA & \url{http://bioweb.cbm.uam.es/software/MEPSA} & GPL & A3 & \cite{Marcos_Alcalde_2015} \\
MSMBuilder & \url{http://msmbuilder.org} & LGPL & A1 & \cite{Beauchamp_2011} \\
packmol & \url{http://www.ime.unicamp.br/~martinez/packmol} & GPL & A1 & \cite{Mart_nez_2009} \\
PDB2PQR & \url{http://www.poissonboltzmann.org} & BSD & A1 & \cite{Dolinsky_2007} \\
PLUMED & \url{http://www.plumed.org} & LGPL & A1 & \cite{Tribello_2014} \\
ProDy & \url{http://prody.csb.pitt.edu} & MIT & A1 & \cite{Bakan_2011} \\
Pteros & \url{http://pteros.sourceforge.net} & Artistic & B2 & \cite{Yesylevskyy_2015} \\
PyEMMA & \url{http://www.emma-project.org} & LGPL & A1 & \cite{Scherer_2015} \\
PyRED & \url{http://upjv.q4md-forcefieldtools.org} & GPL & C1 & \cite{Dupradeau_2010} \\
PYTRAJ & \url{https://github.com/Amber-MD/pytraj} & GPL & A1 & \\
simpletraj & \url{https://github.com/arose/simpletraj} & GPL & A2 & \\
WHAM & \url{http://membrane.urmc.rochester.edu/content/wham} & BSD & C1 \\
\end{tabular}
\iflatexml\else
}
\fi
\caption{\label{mdanalysis} Open source software for setting up and analyzing molecular simulations.}
\end{table}