diff --git a/docs/_data/publications.yml b/docs/_data/publications.yml index 46a54a4..e3d15b6 100644 --- a/docs/_data/publications.yml +++ b/docs/_data/publications.yml @@ -1,567 +1,566 @@ +- title: "Deep implicit statistical shape models for 3D lumbar vertebrae image delineation" + author: "D Ocepek, G Podobnik, B Ibragimov, T Vrtovec" + year: 2024 + journal: "Medical Imaging 2024: Image Processing 12926, 782-788" - title: "Time trends in cardiac doses in 10,000 patients receiving curative thoracic\ \ radiation therapy between 2009 and 2020" author: "NJ Forbes, C Terrones-Campos, A Smith, J Reekie, S Darkner, M Maraldo,\ \ ..." year: 2024 journal: "medRxiv.02. 18.24303007" -- title: "The Use of Machine Learning in Eye Tracking Studies in Medical Imaging:\ - \ A Review" - author: "B Ibragimov, C Mello-Thoms" +- title: "Goal-Conditioned Offline Reinforcement Learning via Metric Learning" + author: "A Reichlin, M Vasco, H Yin, D Kragic" year: 2024 - journal: "IEEE Journal of Biomedical and Health Informatics" -- title: "Multimodal brain age prediction using machine learning: combining structural\ - \ MRI and 5-HT2AR PET-derived features" - author: "RP Dörfel, JM Arenas-Gomez, C Svarer, M Ganz, GM Knudsen, ..." + journal: "arXiv preprint arXiv:2402.10820" +- title: "The past, present, and future of the brain imaging data structure (BIDS)" + author: "RA Poldrack, CJ Markiewicz, S Appelhoff, YK Ashar, T Auer, S Baillet, ..." year: 2024 - journal: "GeroScience, 1-11" + journal: "Imaging Neuroscience 2, 1-19" - title: "XFibrosis: Explicit Vessel-Fiber Modeling for Fibrosis Staging from Liver\ \ Pathology Images" author: "C Yin, S Liu, F Lyu, J Lu, S Darkner, VWS Wong, PC Yuen" year: 2024 journal: "Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern\ \ …" -- title: "Building an AI Support Tool for Real-time Ulcerative Colitis Diagnosis" - author: "B Leth Møller, BZS Lo, J Burisch, F Bendtsen, I Vind, B Ibragimov, C Igel" - year: 2024 - journal: "arXiv e-prints, arXiv: 2404.08693" -- title: "Locally orderless networks" - author: "J Sporring, P Xu, J Lu, F Lauze, S Darkner" - year: 2024 - journal: "arXiv preprint arXiv:2406.13514" -- title: "Parametric volumetric registration" - author: "PA Yushkevich, M Zhang, J Sporring" - year: 2024 - journal: "Medical Image Analysis, 331-354" -- title: "Multiscale and multiresolution analysis" - author: "J Sporring" - year: 2024 - journal: "Medical Image Analysis, 177-197" -- title: "Interactive Perception for Deformable Object Manipulation" - author: "Z Weng, P Zhou, H Yin, A Kravberg, A Varava, D Navarro-Alarcon, ..." - year: 2024 - journal: "arXiv preprint arXiv:2403.05177" -- title: "LM2D: Lyrics-and Music-Driven Dance Synthesis" - author: "W Yin, X Zhao, Y Yu, H Yin, D Kragic, M Björkman" - year: 2024 - journal: "arXiv preprint arXiv:2403.09407" -- title: "Classification of Medical Text in Small and Imbalanced Datasets in a Non-English\ - \ Language" - author: "V Beliveau, H Kaas, M Prener, C Ladefoged, D Elliott, GM Knudsen, ..." - year: 2024 - journal: "Medical Imaging with Deep Learning" - title: "A systematic comparison between FEBio and PolyFEM for biomechanical systems" author: "L Martin, P Jain, Z Ferguson, T Gholamalizadeh, F Moshfeghifar, ..." year: 2024 journal: "Computer Methods and Programs in Biomedicine 244, 107938" -- title: "A sensitivity analysis to quantify the impact of neuroimaging preprocessing\ - \ strategies on subsequent statistical analyses" - author: "B Ozenne, M Norgaard, C Pernet, M Ganz" +- title: "Scalable Motion Style Transfer with Constrained Diffusion Generation" + author: "W Yin, Y Yu, H Yin, D Kragic, M Björkman" year: 2024 - journal: "arXiv preprint arXiv:2404.14882" -- title: "A semi-automatic method for extracting mitochondrial cristae characteristics\ - \ from 3D focused ion beam scanning electron microscopy data" - author: "C Wang, L Østergaard, S Hasselholt, J Sporring" + journal: "Proceedings of the AAAI Conference on Artificial Intelligence 38 (9),\ + \ 10234 …" +- title: "IKPLS: Improved Kernel Partial Least Squares and Fast Cross-Validation Algorithms\ + \ for Python with CPU and GPU Implementations Using NumPy and JAX" + author: "OCG Engstrøm, ES Dreier, BM Jespersen, KS Pedersen" year: 2024 - journal: "Communications Biology 7 (1), 377" -- title: "Generating Synthetic Computed Tomography for Radiotherapy: SynthRAD2023\ - \ Challenge Report" - author: "E Huijben, ML Terpstra, A Galapon Jr, S Pai, A Thummerer, P Koopmans, ..." + journal: "Journal of Open Source Software 9 (99), 6533" +- title: "Differentiable Rendering as a Way to Program Cable-Driven Soft Robots" + author: "K Arnavaz, K Erleben" year: 2024 - journal: "arXiv preprint arXiv:2403.08447" + journal: "arXiv preprint arXiv:2404.07590" - title: "Recognition of radiological decision errors from eye movement during chest\ \ x-ray readings" author: "A Anikina, I Pershin, T Mustafaev, B Ibragimov" year: 2024 journal: "Medical Imaging 2024: Image Perception, Observer Performance, and Technology\ \ …" +- title: "Neuroanatomical dimensions in medication-free individuals with major depressive\ + \ disorder and treatment response to SSRI antidepressant medications or placebo" + author: "CHY Fu, M Antoniades, G Erus, JA Garcia, Y Fan, D Arnone, SR Arnott, ..." + year: 2024 + journal: "Nature Mental Health 2 (2), 164-176" - title: "Young glial progenitor cells competitively replace aged and diseased human\ \ glia in the adult chimeric mouse brain" author: "R Vieira, JN Mariani, NPT Huynh, HJT Stephensen, R Solly, A Tate, ..." year: 2024 journal: "Nature Biotechnology 42 (5), 719-730" -- title: "vOARiability: Interobserver and intermodality variability analysis in OAR\ - \ contouring from head and neck CT and MR images" - author: "G Podobnik, B Ibragimov, P Peterlin, P Strojan, T Vrtovec" +- title: "LM2D: Lyrics-and Music-Driven Dance Synthesis" + author: "W Yin, X Zhao, Y Yu, H Yin, D Kragic, M Björkman" year: 2024 - journal: "Medical Physics 51 (3), 2175-2186" + journal: "arXiv preprint arXiv:2403.09407" +- title: "Classification of Medical Text in Small and Imbalanced Datasets in a Non-English\ + \ Language" + author: "V Beliveau, H Kaas, M Prener, C Ladefoged, D Elliott, GM Knudsen, ..." + year: 2024 + journal: "Medical Imaging with Deep Learning" +- title: "Building an AI Support Tool for Real-Time Ulcerative Colitis Diagnosis" + author: "BL Møller, BZS Lo, J Burisch, F Bendtsen, I Vind, B Ibragimov, C Igel" + year: 2024 + journal: "KI-Künstliche Intelligenz, 1-8" +- title: "Locally orderless networks" + author: "J Sporring, P Xu, J Lu, F Lauze, S Darkner" + year: 2024 + journal: "arXiv preprint arXiv:2406.13514" +- title: "Unfolding the Literature: A Review of Robotic Cloth Manipulation" + author: "A Longhini, Y Wang, I Garcia-Camacho, D Blanco-Mulero, M Moletta, ..." + year: 2024 + journal: "arXiv preprint arXiv:2407.01361" +- title: "Multimodal brain age prediction using machine learning: combining structural\ + \ MRI and 5-HT2AR PET-derived features" + author: "RP Dörfel, JM Arenas-Gomez, C Svarer, M Ganz, GM Knudsen, ..." + year: 2024 + journal: "GeroScience, 1-11" +- title: "Generating synthetic computed tomography for radiotherapy: SynthRAD2023\ + \ challenge report" + author: "EMC Huijben, ML Terpstra, S Pai, A Thummerer, P Koopmans, M Afonso, ..." + year: 2024 + journal: "Medical image analysis, 103276" - title: "HaN-Seg: The head and neck organ-at-risk CT and MR segmentation challenge" author: "G Podobnik, B Ibragimov, E Tappeiner, C Lee, JS Kim, Z Mesbah, ..." year: 2024 - journal: "Radiotherapy and Oncology, 110410" -- title: "Scalable Motion Style Transfer with Constrained Diffusion Generation" - author: "W Yin, Y Yu, H Yin, D Kragic, M Björkman" + journal: "Radiotherapy and Oncology 198, 110410" +- title: "Parametric volumetric registration" + author: "PA Yushkevich, M Zhang, J Sporring" year: 2024 - journal: "Proceedings of the AAAI Conference on Artificial Intelligence 38 (9),\ - \ 10234 …" -- title: "Differentiable Rendering as a Way to Program Cable-Driven Soft Robots" - author: "K Arnavaz, K Erleben" + journal: "Medical Image Analysis, 331-354" +- title: "A sensitivity analysis to quantify the impact of neuroimaging preprocessing\ + \ strategies on subsequent statistical analyses" + author: "B Ozenne, M Norgaard, C Pernet, M Ganz" year: 2024 - journal: "arXiv preprint arXiv:2404.07590" -- title: "Neuroanatomical dimensions in medication-free individuals with major depressive\ - \ disorder and treatment response to SSRI antidepressant medications or placebo" + journal: "arXiv preprint arXiv:2404.14882" +- title: "Publisher Correction: Neuroanatomical dimensions in medication-free individuals\ + \ with major depressive disorder and treatment response to SSRI antidepressant\ + \ medications or placebo" author: "CHY Fu, M Antoniades, G Erus, JA Garcia, Y Fan, D Arnone, SR Arnott, ..." year: 2024 - journal: "Nature Mental Health 2 (2), 164-176" -- title: "Building an AI Support Tool for Real-Time Ulcerative Colitis Diagnosis" - author: "BL Møller, BZS Lo, J Burisch, F Bendtsen, I Vind, B Ibragimov, C Igel" + journal: "Nature Mental Health, 1-1" +- title: "vOARiability: Interobserver and intermodality variability analysis in OAR\ + \ contouring from head and neck CT and MR images" + author: "G Podobnik, B Ibragimov, P Peterlin, P Strojan, T Vrtovec" year: 2024 - journal: "KI-Künstliche Intelligenz, 1-8" -- title: "Goal-Conditioned Offline Reinforcement Learning via Metric Learning" - author: "A Reichlin, M Vasco, H Yin, D Kragic" + journal: "Medical Physics 51 (3), 2175-2186" +- title: "Multiscale and multiresolution analysis" + author: "J Sporring" year: 2024 - journal: "arXiv preprint arXiv:2402.10820" + journal: "Medical Image Analysis, 177-197" +- title: "A semi-automatic method for extracting mitochondrial cristae characteristics\ + \ from 3D focused ion beam scanning electron microscopy data" + author: "C Wang, L Østergaard, S Hasselholt, J Sporring" + year: 2024 + journal: "Communications Biology 7 (1), 377" - title: "Associations between behavioral and emotional problems and brain morphology\ \ in early adolescence: A neuroimaging study using the NRU Serotonin Atlas" author: "D Koc, M Nørgaard, M Ganz, R Muetzel, H El Marroun, H Tiemeier, ..." year: 2024 journal: "OSF" -- title: "Deep implicit statistical shape models for 3D lumbar vertebrae image delineation" - author: "D Ocepek, G Podobnik, B Ibragimov, T Vrtovec" +- title: "Reinforcement learning‐based anatomical maps for pancreas subregion and\ + \ duct segmentation" + author: "S Amiri, T Vrtovec, T Mustafaev, CL Deufel, HS Thomsen, MH Sillesen, ..." year: 2024 - journal: "Medical Imaging 2024: Image Processing 12926, 782-788" -- title: "The past, present, and future of the brain imaging data structure (BIDS)" - author: "RA Poldrack, CJ Markiewicz, S Appelhoff, YK Ashar, T Auer, S Baillet, ..." + journal: "Medical Physics" +- title: "Building an AI Support Tool for Real-time Ulcerative Colitis Diagnosis" + author: "B Leth Møller, BZS Lo, J Burisch, F Bendtsen, I Vind, B Ibragimov, C Igel" year: 2024 - journal: "Imaging Neuroscience 2, 1-19" -- title: "3D mitochondrial ultrastructure using volume electron microscopy" - author: "C Wang, L Østergaard, S Hasselholt, J Sporring" + journal: "arXiv e-prints, arXiv: 2404.08693" +- title: "AI-initiated second opinions: a framework for advanced caries treatment\ + \ planning" + author: "T Dascalu, S Ramezanzade, A Bakhshandeh, L Bjørndal, B Ibragimov" + year: 2024 + journal: "BMC Oral Health 24 (1), 772" +- title: "Statistical investigations into the geometry and homology of random programs" + author: "J Sporring, KF Larsen" + year: 2024 + journal: "arXiv preprint arXiv:2407.04854" +- title: "The Use of Machine Learning in Eye Tracking Studies in Medical Imaging:\ + \ A Review" + author: "B Ibragimov, C Mello-Thoms" + year: 2024 + journal: "IEEE Journal of Biomedical and Health Informatics" +- title: "Interactive Perception for Deformable Object Manipulation" + author: "Z Weng, P Zhou, H Yin, A Kravberg, A Varava, D Navarro-Alarcon, ..." + year: 2024 + journal: "arXiv preprint arXiv:2403.05177" +- title: "Iron Oxide Nanoparticles as a Contrast Agent for Synchrotron Imaging of\ + \ Sperm" + author: "MB Lindhøj, SR Cooper, AS Anker, A Bonnin, M Kristensen, K Qvortrup, ..." year: 2023 - journal: "" -- title: "Test-Time Augmentation Towards Improved Cross-Center PET/CT Segmentations\ - \ by the Swin UNETR" - author: "F Yousefirizi, S Amiri, B Ibragimov, C Gowdy, C Uribe, A Rahmim" + journal: "arXiv preprint arXiv:2309.03908" +- title: "AI-based dimensional neuroimaging system for characterizing heterogeneity\ + \ in brain structure and function in major depressive disorder: COORDINATE-MDD\ + \ consortium design and …" + author: "CHY Fu, G Erus, Y Fan, M Antoniades, D Arnone, SR Arnott, T Chen, ..." year: 2023 - journal: "2023 IEEE Nuclear Science Symposium, Medical Imaging Conference and …" -- title: "Cerebral Palsy–Early Diagnosis and Intervention Trial: protocol for the\ - \ prospective multicentre CP-EDIT study with focus on diagnosis, prognostic factors,\ - \ and intervention" - author: "CE Hoei-Hansen, L Weber, M Johansen, R Fabricius, JK Hansen, ..." + journal: "BMC psychiatry 23 (1), 59" +- title: "Performance and agreement when annotating chest X-ray text reports—a preliminary\ + \ step in the development of a deep learning-based prioritization and detection\ + \ system" + author: "D Li, LM Pehrson, R Bonnevie, M Fraccaro, J Thrane, L Tøttrup, ..." year: 2023 - journal: "BMC pediatrics 23 (1), 544" -- title: "U-Sleep: Automatic Clinical Sleep Staging" - author: "PJ Jennum, M Perslev, C Igel, S Darkner" + journal: "Diagnostics 13 (6), 1070" +- title: "Target anatomical feature localization" + author: "E Ayvali, YE Menglong, B Ibragimov, DB Berman" year: 2023 - journal: "" -- title: "Localise to segment: crop to improve organ at risk segmentation accuracy" - author: "AG Smith, D Kutnár, IR Vogelius, S Darkner, J Petersen" + journal: "US Patent 11,737,663" +- title: "An Automatic DWI/FLAIR Mismatch Assessment of Stroke Patients" + author: "J Johansen, CM Offersen, JF Carlsen, S Ingala, AE Hansen, MB Nielsen, ..." year: 2023 - journal: "arXiv preprint arXiv:2304.04606" -- title: "Machine Learning for Image-Based Radiotherapy Outcome Prediction" - author: "B Ibragimov" + journal: "Diagnostics 14 (1), 69" +- title: "Learning Geometric Representations of Objects via Interaction" + author: "A Reichlin, GL Marchetti, H Yin, A Varava, D Kragic" + year: 2023 + journal: "Joint European Conference on Machine Learning and Knowledge Discovery\ + \ in …" +- title: "Prediction of brain age using structural magnetic resonance imaging: A comparison\ + \ of accuracy and test–retest reliability of publicly available software packages" + author: "RP Dörfel, JM Arenas‐Gomez, PM Fisher, M Ganz, GM Knudsen, ..." year: 2023 - journal: "Artificial Intelligence in Radiation Oncology and Biomedical Physics,\ - \ 25-52" + journal: "Human Brain Mapping 44 (17), 6139-6148" - title: "Extremely weakly-supervised blood vessel segmentation with physiologically\ \ based synthesis and domain adaptation" author: "P Xu, B Lee, O Sosnovtseva, CM Sørensen, K Erleben, S Darkner" year: 2023 journal: "Workshop on Medical Image Learning with Limited and Noisy Data, 191-201" -- title: "A Practical Approach to Estimating the Effect of Synchrotron Radiation on\ - \ Sperm Motility and Viability" - author: "MB Lindhøj, A Bonnin, K Almstrup, TB Dyrby, R Mokso, J Sporring" +- title: "Refractive pose refinement: Generalising the geometric relation between\ + \ camera and refractive interface" + author: "X Hu, F Lauze, KS Pedersen" year: 2023 - journal: "bioRxiv.06. 08.544169" -- title: "A Sequential Framework for Detection and Classification of Abnormal Teeth\ - \ in Panoramic X-rays" - author: "T Dascalu, S Ramezanzade, A Bakhshandeh, L Bjorndal, B Ibragimov" + journal: "International Journal of Computer Vision 131 (6), 1448-1476" +- title: "Assignment Theory-Augmented Neural Network for Dental Arch Labeling" + author: "T Dascalu, B Ibragimov" year: 2023 - journal: "arXiv preprint arXiv:2309.00027" -- title: "cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule Diagnosis" - author: "J Lu, C Yin, K Erleben, MB Nielsen, S Darkner" + journal: "International Conference on Medical Image Computing and Computer-Assisted\ + \ …" +- title: "Deep-learning-based segmentation of individual tooth and bone with periodontal\ + \ ligament interface details for simulation purposes" + author: "P Xu, T Gholamalizadeh, F Moshfeghifar, S Darkner, K Erleben" year: 2023 - journal: "2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-5" -- title: "Endoscopic anatomical feature tracking" - author: "E Ayvali, YE Menglong, B Ibragimov, DB Berman" + journal: "IEEE Access" +- title: "Morphology on categorical distributions" + author: "SN Ørting, HJT Stephensen, J Sporring" year: 2023 - journal: "US Patent App. 18/221,333" -- title: "Multimodal dance style transfer" + journal: "Journal of Mathematical Imaging and Vision 65 (6), 861-873" +- title: "Dance style transfer with cross-modal transformer" author: "W Yin, H Yin, K Baraka, D Kragic, M Björkman" year: 2023 - journal: "Machine Vision and Applications 34 (4), 48" -- title: "Deep learning for detection of clinical operations in robot-assisted percutaneous\ - \ renal access" - author: "B Ibragimov, J Zhen, E Ayvali" + journal: "Proceedings of the IEEE/CVF Winter Conference on Applications of Computer\ + \ …" +- title: "Controllable Motion Synthesis and Reconstruction with Autoregressive Diffusion\ + \ Models" + author: "W Yin, R Tu, H Yin, D Kragic, H Kjellström, M Björkman" year: 2023 - journal: "IEEE Access" + journal: "2023 32nd IEEE International Conference on Robot and Human Interactive\ + \ …" +- title: "Association between the loudness dependence of auditory evoked potential,\ + \ serotonergic neurotransmission and treatment outcome in patients with depression" + author: "CT Ip, M Ganz, B Ozenne, S Olbrich, V Beliveau, VH Dam, ..." + year: 2023 + journal: "European Neuropsychopharmacology 70, 32-44" +- title: "Are demographically invariant models and representations in medical imaging\ + \ fair?" + author: "E Petersen, E Ferrante, M Ganz, A Feragen" + year: 2023 + journal: "arXiv preprint arXiv:2305.01397" +- title: "Localise to segment: crop to improve organ at risk segmentation accuracy" + author: "AG Smith, D Kutnár, IR Vogelius, S Darkner, J Petersen" + year: 2023 + journal: "arXiv preprint arXiv:2304.04606" +- title: "Analyzing Near-Infrared Hyperspectral Imaging for Protein Content Regression\ + \ and Grain Variety Classification Using Bulk References and Varying Grain-to-Background\ + \ Ratios" + author: "OCG Engstrøm, ES Dreier, BM Jespersen, KS Pedersen" + year: 2023 + journal: "arXiv preprint arXiv:2311.04042" +- title: "Collision-constrained deformable image registration framework for discontinuity\ + \ management" + author: "T Alscher, K Erleben, S Darkner" + year: 2023 + journal: "Plos one 18 (8), e0290243" - title: "SE (3) Group Convolutional Neural Networks and a Study on Group Convolutions\ \ and Equivariance for DWI Segmentation" author: "R Liu, F Lauze, E Bekkers, K Erleben, S Darkner" year: 2023 journal: "" -- title: "Learning Geometric Representations of Objects via Interaction" - author: "A Reichlin, GL Marchetti, H Yin, A Varava, D Kragic" +- title: "Cross-modal conceptualization in bottleneck models" + author: "D Alukaev, S Kiselev, I Pershin, B Ibragimov, V Ivanov, A Kornaev, I Titov" year: 2023 - journal: "Joint European Conference on Machine Learning and Knowledge Discovery\ - \ in …" -- title: "Deep Learning-Assisted Localisation of Nanoparticles in synthetically generated\ - \ two-photon microscopy images" - author: "R Netterstrøm, N Kutuzov, S Darkner, MJ Pallesen, MJ Lauritzen, ..." + journal: "arXiv preprint arXiv:2310.14805" +- title: "Method and system of global position prediction for imu motion capture" + author: "P Schreiner, K Erleben, S Darkner" year: 2023 - journal: "arXiv preprint arXiv:2303.16903" -- title: "Controllable Motion Synthesis and Reconstruction with Autoregressive Diffusion\ - \ Models" - author: "W Yin, R Tu, H Yin, D Kragic, H Kjellström, M Björkman" + journal: "US Patent App. 17/892,009" +- title: "A hybrid approach to full-scale reconstruction of renal arterial network" + author: "P Xu, NH Holstein-Rathlou, SB Søgaard, C Gundlach, CM Sørensen, ..." year: 2023 - journal: "2023 32nd IEEE International Conference on Robot and Human Interactive\ - \ …" -- title: "Assignment Theory-Augmented Neural Network for Dental Arch Labeling" - author: "T Dascalu, B Ibragimov" + journal: "Scientific Reports 13 (1), 7569" +- title: "A Sequential Framework for Detection and Classification of Abnormal Teeth\ + \ in Panoramic X-rays" + author: "T Dascalu, S Ramezanzade, A Bakhshandeh, L Bjorndal, B Ibragimov" year: 2023 - journal: "International Conference on Medical Image Computing and Computer-Assisted\ - \ …" -- title: "Target anatomical feature localization" - author: "E Ayvali, YE Menglong, B Ibragimov, DB Berman" + journal: "arXiv preprint arXiv:2309.00027" +- title: "3D mitochondrial ultrastructure using volume electron microscopy" + author: "C Wang, L Østergaard, S Hasselholt, J Sporring" year: 2023 - journal: "US Patent 11,737,663" -- title: "Morphology on categorical distributions" - author: "SN Ørting, HJT Stephensen, J Sporring" + journal: "" +- title: "The path toward equal performance in medical machine learning" + author: "E Petersen, S Holm, M Ganz, A Feragen" year: 2023 - journal: "Journal of Mathematical Imaging and Vision 65 (6), 861-873" -- title: "Performance and agreement when annotating chest X-ray text reports—a preliminary\ - \ step in the development of a deep learning-based prioritization and detection\ - \ system" - author: "D Li, LM Pehrson, R Bonnevie, M Fraccaro, J Thrane, L Tøttrup, ..." + journal: "Patterns 4 (7)" +- title: "Endoscopic anatomical feature tracking" + author: "E Ayvali, YE Menglong, B Ibragimov, DB Berman" year: 2023 - journal: "Diagnostics 13 (6), 1070" + journal: "US Patent App. 18/221,333" - title: "The efficiency of artificial intelligence methods for finding radiographic\ \ features in different endodontic treatments-a systematic review" author: "S Ramezanzade, T Laurentiu, A Bakhshandah, B Ibragimov, T Kvist, ..." year: 2023 journal: "Acta Odontologica Scandinavica 81 (6), 422-435" -- title: "Are demographically invariant models and representations in medical imaging\ - \ fair?" - author: "E Petersen, E Ferrante, M Ganz, A Feragen" - year: 2023 - journal: "arXiv preprint arXiv:2305.01397" -- title: "Iron Oxide Nanoparticles as a Contrast Agent for Synchrotron Imaging of\ - \ Sperm" - author: "MB Lindhøj, SR Cooper, AS Anker, A Bonnin, M Kristensen, K Qvortrup, ..." +- title: "Astrocytic engagement of the corticostriatal synaptic cleft is disrupted\ + \ in a mouse model of Huntington’s disease" + author: "CB Villanueva, HJT Stephensen, R Mokso, A Benraiss, J Sporring, ..." year: 2023 - journal: "arXiv preprint arXiv:2309.03908" -- title: "Data sharing in neuroimaging: experiences from the BIDS project" - author: "M Ganz, RA Poldrack" + journal: "Proceedings of the National Academy of Sciences 120 (24), e2210719120" +- title: "Deep phenotyping towards precision psychiatry of first-episode depression—\ + the Brain Drugs-Depression cohort" + author: "KHR Jensen, VH Dam, M Ganz, PMD Fisher, CT Ip, A Sankar, ..." year: 2023 - journal: "Nature Reviews Neuroscience 24 (12), 729-730" -- title: "Differentiable Depth for Real2Sim Calibration of Soft Body Simulations" - author: "K Arnavaz, MK Nielsen, PG Kry, M Macklin, K Erleben" + journal: "BMC psychiatry 23 (1), 151" +- title: "On (assessing) the fairness of risk score models" + author: "E Petersen, M Ganz, S Holm, A Feragen" year: 2023 - journal: "Computer Graphics Forum 42 (1), 277-289" -- title: "Bias in context: What to do when complete bias removal is not an option" - author: "S Holm, E Petersen, M Ganz, A Feragen" + journal: "Proceedings of the 2023 ACM Conference on Fairness, Accountability, and\ + \ …" +- title: "Why is the winner the best?" + author: "M Eisenmann, A Reinke, V Weru, MD Tizabi, F Isensee, TJ Adler, S Ali, ..." year: 2023 - journal: "Proceedings of the National Academy of Sciences 120 (23), e2304710120" + journal: "Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern\ + \ …" - title: "Alignment techniques for percutaneous access" author: "E Ayvali, B Ibragimov, S Plewe, JZ Bone, M Drahos, Y Malinin" year: 2023 journal: "US Patent App. 18/321,571" -- title: "Music-and Lyrics-driven Dance Synthesis" - author: "W Yin, Q Yao, Y Yu, H Yin, D Kragic, M Björkman" - year: 2023 - journal: "arXiv preprint arXiv:2310.00455" -- title: "Cross-modal conceptualization in bottleneck models" - author: "D Alukaev, S Kiselev, I Pershin, B Ibragimov, V Ivanov, A Kornaev, I Titov" - year: 2023 - journal: "arXiv preprint arXiv:2310.14805" -- title: "Multimodal CT and MR segmentation of head and neck organs-at-risk" - author: "G Podobnik, P Strojan, P Peterlin, B Ibragimov, T Vrtovec" +- title: "Bias in context: What to do when complete bias removal is not an option" + author: "S Holm, E Petersen, M Ganz, A Feragen" year: 2023 - journal: "International Conference on Medical Image Computing and Computer-Assisted\ - \ …" -- title: "Selective MRI reacquisition to extend the working range of retrospective\ - \ motion correction" - author: "M Laustsen, J Slipsager, T Gaaß, A Van der Kouwe, M Ganz, LG Hanson" + journal: "Proceedings of the National Academy of Sciences 120 (23), e2304710120" +- title: "Data sharing in neuroimaging: experiences from the BIDS project" + author: "M Ganz, RA Poldrack" year: 2023 - journal: "2023 ISMRM & SMRT Annual Meeting & Exhibition" -- title: "Prediction of pulp exposure before caries excavation using artificial intelligence:\ - \ Deep learning-based image data versus standard dental radiographs" - author: "S Ramezanzade, TL Dascalu, B Ibragimov, A Bakhshandeh, L Bjørndal" + journal: "Nature Reviews Neuroscience 24 (12), 729-730" +- title: "Deep Learning-Assisted Localisation of Nanoparticles in synthetically generated\ + \ two-photon microscopy images" + author: "R Netterstrøm, N Kutuzov, S Darkner, MJ Pallesen, MJ Lauritzen, ..." year: 2023 - journal: "Journal of Dentistry 138, 104732" -- title: "An Automatic DWI/FLAIR Mismatch Assessment of Stroke Patients" - author: "J Johansen, CM Offersen, JF Carlsen, S Ingala, AE Hansen, MB Nielsen, ..." + journal: "arXiv preprint arXiv:2303.16903" +- title: "cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule Diagnosis" + author: "J Lu, C Yin, K Erleben, MB Nielsen, S Darkner" year: 2023 - journal: "Diagnostics 14 (1), 69" + journal: "2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-5" - title: "Ultrastructure of mitochondria in 3D from volume electron microscopy" author: "C Wang, L Østergaard, S Hasselholt, J Sporring" year: 2023 journal: "Euromit: International meeting on mitochondrial pathology" -- title: "Association between the loudness dependence of auditory evoked potential,\ - \ serotonergic neurotransmission and treatment outcome in patients with depression" - author: "CT Ip, M Ganz, B Ozenne, S Olbrich, V Beliveau, VH Dam, ..." - year: 2023 - journal: "European Neuropsychopharmacology 70, 32-44" -- title: "Refractive pose refinement: Generalising the geometric relation between\ - \ camera and refractive interface" - author: "X Hu, F Lauze, KS Pedersen" +- title: "Multimodal dance style transfer" + author: "W Yin, H Yin, K Baraka, D Kragic, M Björkman" year: 2023 - journal: "International Journal of Computer Vision 131 (6), 1448-1476" -- title: "Analyzing Near-Infrared Hyperspectral Imaging for Protein Content Regression\ - \ and Grain Variety Classification Using Bulk References and Varying Grain-to-Background\ - \ Ratios" - author: "OCG Engstrøm, ES Dreier, BM Jespersen, KS Pedersen" + journal: "Machine Vision and Applications 34 (4), 48" +- title: "The art, science, and secrets of scanning young children" + author: "MN Spann, JL Wisnowski, B Ahtam, W Gao, H Huang, MB Nebel, ..." year: 2023 - journal: "arXiv preprint arXiv:2311.04042" -- title: "Method and system of global position prediction for imu motion capture" - author: "P Schreiner, K Erleben, S Darkner" + journal: "Biological psychiatry 93 (10), 858-860" +- title: "10 years of reproducibility in biomedical research: how can we achieve generalizability\ + \ and fairness?" + author: "AS Wagner, C Maumet, M Ganz, CG van Praag" year: 2023 - journal: "US Patent App. 17/892,009" -- title: "A hybrid approach to full-scale reconstruction of renal arterial network" - author: "P Xu, NH Holstein-Rathlou, SB Søgaard, C Gundlach, CM Sørensen, ..." + journal: "ISBI 2023-20th IEEE International Symposium on Biomedical Imaging, 3" +- title: "Prediction of pulp exposure before caries excavation using artificial intelligence:\ + \ Deep learning-based image data versus standard dental radiographs" + author: "S Ramezanzade, TL Dascalu, B Ibragimov, A Bakhshandeh, L Bjørndal" year: 2023 - journal: "Scientific Reports 13 (1), 7569" + journal: "Journal of Dentistry 138, 104732" - title: "Improving deep learning on hyperspectral images of grain by incorporating\ \ domain knowledge from chemometrics" author: "OCG Engstrøm, ES Dreier, BM Jespersen, KS Pedersen" year: 2023 journal: "Proceedings of the IEEE/CVF International Conference on Computer Vision,\ \ 485-494" -- title: "Dance style transfer with cross-modal transformer" - author: "W Yin, H Yin, K Baraka, D Kragic, M Björkman" +- title: "A Practical Approach to Estimating the Effect of Synchrotron Radiation on\ + \ Sperm Motility and Viability" + author: "MB Lindhøj, A Bonnin, K Almstrup, TB Dyrby, R Mokso, J Sporring" year: 2023 - journal: "Proceedings of the IEEE/CVF Winter Conference on Applications of Computer\ - \ …" -- title: "On (assessing) the fairness of risk score models" - author: "E Petersen, M Ganz, S Holm, A Feragen" + journal: "bioRxiv.06. 08.544169" +- title: "Multimodal CT and MR segmentation of head and neck organs-at-risk" + author: "G Podobnik, P Strojan, P Peterlin, B Ibragimov, T Vrtovec" year: 2023 - journal: "Proceedings of the 2023 ACM Conference on Fairness, Accountability, and\ + journal: "International Conference on Medical Image Computing and Computer-Assisted\ \ …" -- title: "Deep phenotyping towards precision psychiatry of first-episode depression—\ - the Brain Drugs-Depression cohort" - author: "KHR Jensen, VH Dam, M Ganz, PMD Fisher, CT Ip, A Sankar, ..." - year: 2023 - journal: "BMC psychiatry 23 (1), 151" -- title: "Prediction of brain age using structural magnetic resonance imaging: A comparison\ - \ of accuracy and test–retest reliability of publicly available software packages" - author: "RP Dörfel, JM Arenas‐Gomez, PM Fisher, M Ganz, GM Knudsen, ..." - year: 2023 - journal: "Human Brain Mapping 44 (17), 6139-6148" -- title: "AI-based dimensional neuroimaging system for characterizing heterogeneity\ - \ in brain structure and function in major depressive disorder: COORDINATE-MDD\ - \ consortium design and …" - author: "CHY Fu, G Erus, Y Fan, M Antoniades, D Arnone, SR Arnott, T Chen, ..." - year: 2023 - journal: "BMC psychiatry 23 (1), 59" -- title: "10 years of reproducibility in biomedical research: how can we achieve generalizability\ - \ and fairness?" - author: "AS Wagner, C Maumet, M Ganz, CG van Praag" - year: 2023 - journal: "ISBI 2023-20th IEEE International Symposium on Biomedical Imaging, 3" -- title: "Deep-learning-based segmentation of individual tooth and bone with periodontal\ - \ ligament interface details for simulation purposes" - author: "P Xu, T Gholamalizadeh, F Moshfeghifar, S Darkner, K Erleben" - year: 2023 - journal: "IEEE Access" -- title: "The art, science, and secrets of scanning young children" - author: "MN Spann, JL Wisnowski, B Ahtam, W Gao, H Huang, MB Nebel, ..." +- title: "Test-Time Augmentation Towards Improved Cross-Center PET/CT Segmentations\ + \ by the Swin UNETR" + author: "F Yousefirizi, S Amiri, B Ibragimov, C Gowdy, C Uribe, A Rahmim" year: 2023 - journal: "Biological psychiatry 93 (10), 858-860" -- title: "Collision-constrained deformable image registration framework for discontinuity\ - \ management" - author: "T Alscher, K Erleben, S Darkner" + journal: "2023 IEEE Nuclear Science Symposium, Medical Imaging Conference and …" +- title: "U-Sleep: Automatic Clinical Sleep Staging" + author: "PJ Jennum, M Perslev, C Igel, S Darkner" year: 2023 - journal: "Plos one 18 (8), e0290243" -- title: "The path toward equal performance in medical machine learning" - author: "E Petersen, S Holm, M Ganz, A Feragen" + journal: "" +- title: "Differentiable Depth for Real2Sim Calibration of Soft Body Simulations" + author: "K Arnavaz, MK Nielsen, PG Kry, M Macklin, K Erleben" year: 2023 - journal: "Patterns 4 (7)" -- title: "Astrocytic engagement of the corticostriatal synaptic cleft is disrupted\ - \ in a mouse model of Huntington’s disease" - author: "CB Villanueva, HJT Stephensen, R Mokso, A Benraiss, J Sporring, ..." + journal: "Computer Graphics Forum 42 (1), 277-289" +- title: "Cerebral Palsy–Early Diagnosis and Intervention Trial: protocol for the\ + \ prospective multicentre CP-EDIT study with focus on diagnosis, prognostic factors,\ + \ and intervention" + author: "CE Hoei-Hansen, L Weber, M Johansen, R Fabricius, JK Hansen, ..." year: 2023 - journal: "Proceedings of the National Academy of Sciences 120 (24), e2210719120" -- title: "Why is the winner the best?" - author: "M Eisenmann, A Reinke, V Weru, MD Tizabi, F Isensee, TJ Adler, S Ali, ..." + journal: "BMC pediatrics 23 (1), 544" +- title: "Music-and Lyrics-driven Dance Synthesis" + author: "W Yin, Q Yao, Y Yu, H Yin, D Kragic, M Björkman" year: 2023 - journal: "Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern\ - \ …" -- title: "Consensus-based normalizing-flow control: A case study in learning dual-arm\ - \ coordination" - author: "H Yin, CK Verginis, D Kragic" + journal: "arXiv preprint arXiv:2310.00455" +- title: "Gmc-geometric multimodal contrastive representation learning" + author: "P Poklukar, V Miguel, H Yin, FS Melo, A Paiva, D Kragic" year: 2022 - journal: "2022 IEEE/RSJ International Conference on Intelligent Robots and Systems\ - \ …" -- title: "LibHip: An open-access hip joint model repository suitable for finite element\ - \ method simulation" - author: "F Moshfeghifar, T Gholamalizadeh, Z Ferguson, T Schneider, MB Nielsen,\ - \ ..." + journal: "International Conference on Machine Learning" +- title: "Reducing Annotation Need in Self-explanatory Models for Lung Nodule Diagnosis" + author: "J Lu, C Yin, O Krause, K Erleben, MB Nielsen, S Darkner" year: 2022 - journal: "Computer methods and programs in biomedicine 226, 107140" -- title: "Hyperspectral imaging for classification of bulk grain samples with deep\ - \ convolutional neural networks" - author: "ES Dreier, KM Sorensen, T Lund-Hansen, BM Jespersen, KS Pedersen" + journal: "International Workshop on Interpretability of Machine Intelligence in\ + \ …" +- title: "Structural and functional changes in a genetic model of amyotrophic lateral\ + \ sclerosis" + author: "S Hasselholt, HJT Stephensen, D Janssen, A Hasselholt, A Dubois, ..." year: 2022 - journal: "Journal of Near Infrared Spectroscopy 30 (3), 107-121" + journal: "" - title: "Embedding koopman optimal control in robot policy learning" author: "H Yin, MC Welle, D Kragic" year: 2022 journal: "2022 IEEE/RSJ International Conference on Intelligent Robots and Systems\ \ …" -- title: "Structural and functional changes in a genetic model of amyotrophic lateral\ - \ sclerosis" - author: "S Hasselholt, HJT Stephensen, D Janssen, A Hasselholt, A Dubois, ..." +- title: "Accuracy and consistency of intensity-based deformable image registration\ + \ in 4DCT for tumor motion estimation in liver radiotherapy planning" + author: "JD Tascón-Vidarte, LB Stick, M Josipovic, S Risum, J Jomier, K Erleben,\ + \ ..." year: 2022 - journal: "" + journal: "Plos one 17 (7), e0271064" +- title: "On the Subspace Structure of Gradient-Based Meta-Learning" + author: "G Tegnér, A Reichlin, H Yin, M Björkman, D Kragic" + year: 2022 + journal: "arXiv preprint arXiv:2207.03804" - title: "Bundle geodesic convolutional neural network for diffusion-weighted imaging\ \ segmentation" author: "R Liu, F Lauze, K Erleben, RW Berg, S Darkner" year: 2022 journal: "Journal of Medical Imaging 9 (6), 064002-064002" -- title: "Back to the manifold: Recovering from out-of-distribution states" - author: "A Reichlin, GL Marchetti, H Yin, A Ghadirzadeh, D Kragic" - year: 2022 - journal: "2022 IEEE/RSJ International Conference on Intelligent Robots and Systems\ - \ …" -- title: "Extracting Mitochondrial Cristae Characteristics from 3D Focused Ion Beam\ - \ Scanning Electron Microscopy Data" - author: "C Wang, L Østergaard, S Hasselholt, J Sporring" +- title: "Auto-segmentation of Hip Joints Using MultiPlanar UNet with Transfer Learning" + author: "P Xu, F Moshfeghifar, T Gholamalizadeh, MB Nielsen, K Erleben, ..." year: 2022 - journal: "BioRxiv.11. 08.515664" -- title: "Open-Full-Jaw: An open-access dataset and pipeline for finite element models\ - \ of human jaw" - author: "T Gholamalizadeh, F Moshfeghifar, Z Ferguson, T Schneider, D Panozzo, ..." + journal: "Workshop on Medical Image Learning with Limited and Noisy Data, 153-162" +- title: "Rove-Tree-11: The not-so-Wild Rover, A hierarchically structured image dataset\ + \ for deep metric learning research" + author: "R Hunt, KS Pedersen" year: 2022 - journal: "Computer Methods and Programs in Biomedicine 224, 107009" -- title: "Call for Papers Focused Section on Design, Modeling, Learning and Control\ - \ for Bimanual Manipulation Mechatronics" - author: "S Calinon, F Chen, M Li, N Figueroa, H Yin, J Silverio, A Billard" + journal: "Proceedings of the Asian Conference on Computer Vision, 2967-2983" +- title: "Enabling visual action planning for object manipulation through latent space\ + \ roadmap" + author: "M Lippi, P Poklukar, MC Welle, A Varava, H Yin, A Marino, D Kragic" year: 2022 - journal: "IEEE-ASME TRANSACTIONS ON MECHATRONICS 27 (3), 1813-1814" + journal: "IEEE Transactions on Robotics 39 (1), 57-75" - title: "An algebra for local histograms" author: "J Sporring, S Darkner" year: 2022 journal: "Frontiers in Computer Science 4, 939563" +- title: "Extracting Mitochondrial Cristae Characteristics from 3D Focused Ion Beam\ + \ Scanning Electron Microscopy Data" + author: "C Wang, L Østergaard, S Hasselholt, J Sporring" + year: 2022 + journal: "BioRxiv.11. 08.515664" - title: "Leveraging hierarchy in multimodal generative models for effective cross-modality\ \ inference" author: "M Vasco, H Yin, FS Melo, A Paiva" year: 2022 journal: "Neural Networks 146, 238-255" -- title: "Contact and friction simulation for computer graphics" - author: "S Andrews, K Erleben, Z Ferguson" +- title: "Back to the manifold: Recovering from out-of-distribution states" + author: "A Reichlin, GL Marchetti, H Yin, A Ghadirzadeh, D Kragic" year: 2022 - journal: "ACM SIGGRAPH 2022 Courses, 1-172" + journal: "2022 IEEE/RSJ International Conference on Intelligent Robots and Systems\ + \ …" +- title: "Hyperspectral imaging for classification of bulk grain samples with deep\ + \ convolutional neural networks" + author: "ES Dreier, KM Sorensen, T Lund-Hansen, BM Jespersen, KS Pedersen" + year: 2022 + journal: "Journal of Near Infrared Spectroscopy 30 (3), 107-121" +- title: "Layer III pyramidal cells in the prefrontal cortex reveal morphological\ + \ changes in subjects with depression, schizophrenia, and suicide" + author: "NY Larsen, N Vihrs, J Møller, J Sporring, X Tan, X Li, G Ji, G Rajkowska,\ + \ ..." + year: 2022 + journal: "Translational psychiatry 12 (1), 363" - title: "Inter-and intra-observer agreement when using a diagnostic labeling scheme\ \ for annotating findings on chest x-rays—an early step in the development of\ \ a deep learning-based …" author: "D Li, LM Pehrson, L Tøttrup, M Fraccaro, R Bonnevie, J Thrane, ..." year: 2022 journal: "Diagnostics 12 (12), 3112" -- title: "Geometric multimodal contrastive representation learning" - author: "P Poklukar, M Vasco, H Yin, FS Melo, A Paiva, D Kragic" - year: 2022 - journal: "International Conference on Machine Learning, 17782-17800" -- title: "Reconstructing binary signals from local histograms" - author: "J Sporring, S Darkner" - year: 2022 - journal: "Entropy 24 (3), 433" -- title: "Accuracy and consistency of intensity-based deformable image registration\ - \ in 4DCT for tumor motion estimation in liver radiotherapy planning" - author: "JD Tascón-Vidarte, LB Stick, M Josipovic, S Risum, J Jomier, K Erleben,\ - \ ..." - year: 2022 - journal: "Plos one 17 (7), e0271064" -- title: "Group convolutional neural networks for DWI segmentation" - author: "R Liu, F Lauze, E Bekkers, K Erleben, S Darkner" - year: 2022 - journal: "Geometric Deep Learning in Medical Image Analysis, 96-106" -- title: "Rove-Tree-11: The not-so-Wild Rover, A hierarchically structured image dataset\ - \ for deep metric learning research" - author: "R Hunt, KS Pedersen" - year: 2022 - journal: "Proceedings of the Asian Conference on Computer Vision, 2967-2983" -- title: "Auto-segmentation of Hip Joints Using MultiPlanar UNet with Transfer Learning" - author: "P Xu, F Moshfeghifar, T Gholamalizadeh, MB Nielsen, K Erleben, ..." - year: 2022 - journal: "Workshop on Medical Image Learning with Limited and Noisy Data, 153-162" -- title: "On the Subspace Structure of Gradient-Based Meta-Learning" - author: "G Tegnér, A Reichlin, H Yin, M Björkman, D Kragic" - year: 2022 - journal: "arXiv preprint arXiv:2207.03804" - title: "Pseudo-label guided image synthesis for semi-supervised covid-19 pneumonia\ \ infection segmentation" author: "F Lyu, M Ye, JF Carlsen, K Erleben, S Darkner, PC Yuen" year: 2022 journal: "IEEE Transactions on Medical Imaging 42 (3), 797-809" -- title: "Reducing Annotation Need in Self-explanatory Models for Lung Nodule Diagnosis" - author: "J Lu, C Yin, O Krause, K Erleben, MB Nielsen, S Darkner" +- title: "Open-Full-Jaw: An open-access dataset and pipeline for finite element models\ + \ of human jaw" + author: "T Gholamalizadeh, F Moshfeghifar, Z Ferguson, T Schneider, D Panozzo, ..." year: 2022 - journal: "International Workshop on Interpretability of Machine Intelligence in\ - \ …" -- title: "Enabling visual action planning for object manipulation through latent space\ - \ roadmap" - author: "M Lippi, P Poklukar, MC Welle, A Varava, H Yin, A Marino, D Kragic" + journal: "Computer Methods and Programs in Biomedicine 224, 107009" +- title: "Call for Papers Focused Section on Design, Modeling, Learning and Control\ + \ for Bimanual Manipulation Mechatronics" + author: "S Calinon, F Chen, M Li, N Figueroa, H Yin, J Silverio, A Billard" year: 2022 - journal: "IEEE Transactions on Robotics 39 (1), 57-75" -- title: "Gmc-geometric multimodal contrastive representation learning" - author: "P Poklukar, V Miguel, H Yin, FS Melo, A Paiva, D Kragic" + journal: "IEEE-ASME TRANSACTIONS ON MECHATRONICS 27 (3), 1813-1814" +- title: "Geometric multimodal contrastive representation learning" + author: "P Poklukar, M Vasco, H Yin, FS Melo, A Paiva, D Kragic" year: 2022 - journal: "International Conference on Machine Learning" -- title: "Layer III pyramidal cells in the prefrontal cortex reveal morphological\ - \ changes in subjects with depression, schizophrenia, and suicide" - author: "NY Larsen, N Vihrs, J Møller, J Sporring, X Tan, X Li, G Ji, G Rajkowska,\ + journal: "International Conference on Machine Learning, 17782-17800" +- title: "LibHip: An open-access hip joint model repository suitable for finite element\ + \ method simulation" + author: "F Moshfeghifar, T Gholamalizadeh, Z Ferguson, T Schneider, MB Nielsen,\ \ ..." year: 2022 - journal: "Translational psychiatry 12 (1), 363" -- title: "Absolute and relative pose estimation in refractive multi view" - author: "X Hu, F Lauze, KS Pedersen, J Mélou" - year: 2021 - journal: "Proceedings of the IEEE/CVF international conference on computer vision\ + journal: "Computer methods and programs in biomedicine 226, 107140" +- title: "Consensus-based normalizing-flow control: A case study in learning dual-arm\ + \ coordination" + author: "H Yin, CK Verginis, D Kragic" + year: 2022 + journal: "2022 IEEE/RSJ International Conference on Intelligent Robots and Systems\ \ …" -- title: "Cellular 3D-reconstruction and analysis in the human cerebral cortex using\ - \ automatic serial sections" - author: "NY Larsen, X Li, X Tan, G Ji, J Lin, G Rajkowska, J Møller, N Vihrs, ..." - year: 2021 - journal: "Communications Biology 4 (1), 1030" -- title: "Predicting Protein Content in Grain Using Hyperspectral Deep Learning" - author: "OCG Engstrom, ES Dreier, KS Pedersen" +- title: "Contact and friction simulation for computer graphics" + author: "S Andrews, K Erleben, Z Ferguson" + year: 2022 + journal: "ACM SIGGRAPH 2022 Courses, 1-172" +- title: "Group convolutional neural networks for DWI segmentation" + author: "R Liu, F Lauze, E Bekkers, K Erleben, S Darkner" + year: 2022 + journal: "Geometric Deep Learning in Medical Image Analysis, 96-106" +- title: "Reconstructing binary signals from local histograms" + author: "J Sporring, S Darkner" + year: 2022 + journal: "Entropy 24 (3), 433" +- title: "Measuring shape relations using r-parallel sets" + author: "HJT Stephensen, AM Svane, CB Villanueva, SA Goldman, J Sporring" year: 2021 - journal: "2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW\ - \ …" + journal: "Journal of Mathematical Imaging and Vision 63 (8), 1069-1083" - title: "How to sense the world: Leveraging hierarchy in multimodal perception for\ \ robust reinforcement learning agents" author: "M Vasco, H Yin, FS Melo, A Paiva" year: 2021 journal: "arXiv preprint arXiv:2110.03608" -- title: "Measuring shape relations using r-parallel sets" - author: "HJT Stephensen, AM Svane, CB Villanueva, SA Goldman, J Sporring" +- title: "Absolute and relative pose estimation in refractive multi view" + author: "X Hu, F Lauze, KS Pedersen, J Mélou" year: 2021 - journal: "Journal of Mathematical Imaging and Vision 63 (8), 1069-1083" + journal: "Proceedings of the IEEE/CVF international conference on computer vision\ + \ …" - title: "How few annotations are needed for segmentation using a multi-planar U-Net?" author: "WM Laprade, M Perslev, J Sporring" year: 2021 journal: "MICCAI Workshop on Deep Generative Models, 209-216" -- title: "Graph-based task-specific prediction models for interactions between deformable\ - \ and rigid objects" - author: "Z Weng, F Paus, A Varava, H Yin, T Asfour, D Kragic" +- title: "Predicting Protein Content in Grain Using Hyperspectral Deep Learning" + author: "OCG Engstrom, ES Dreier, KS Pedersen" year: 2021 - journal: "2021 IEEE/RSJ International Conference on Intelligent Robots and Systems\ + journal: "2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW\ \ …" - title: "Deep learning for detection of railway signs and signals" author: "G Karagiannis, S Olsen, K Pedersen" year: 2020 journal: "Advances in Computer Vision: Proceedings of the 2019 Computer Vision …" -- title: "A cross-center smoothness prior for variational Bayesian brain tissue segmentation" - author: "WM Kouw, SN Ørting, J Petersen, KS Pedersen, M de Bruijne" - year: 2019 - journal: "Information Processing in Medical Imaging: 26th International Conference\ - \ …" - title: "Pre-harvest weed mapping of Cirsium arvense in wheat and barley with off-the-shelf\ \ UAVs" author: "J Rasmussen, J Nielsen, JC Streibig, JE Jensen, KS Pedersen, SI Olsen" year: 2019 journal: "Precision Agriculture 20, 983-999" +- title: "A cross-center smoothness prior for variational Bayesian brain tissue segmentation" + author: "WM Kouw, SN Ørting, J Petersen, KS Pedersen, M de Bruijne" + year: 2019 + journal: "Information Processing in Medical Imaging: 26th International Conference\ + \ …" +- title: "Big universe, big data: machine learning and image analysis for astronomy" + author: "J Kremer, K Stensbo-Smidt, F Gieseke, KS Pedersen, C Igel" + year: 2017 + journal: "IEEE Intelligent Systems 32 (2), 16-22" - title: "Sacrificing information for the greater good: how to select photometric\ \ bands for optimal accuracy" author: "K Stensbo-Smidt, F Gieseke, C Igel, A Zirm, K Steenstrup Pedersen" year: 2017 journal: "Monthly Notices of the Royal Astronomical Society 464 (3), 2577-2596" -- title: "Big universe, big data: machine learning and image analysis for astronomy" - author: "J Kremer, K Stensbo-Smidt, F Gieseke, KS Pedersen, C Igel" - year: 2017 - journal: "IEEE Intelligent Systems 32 (2), 16-22" -- title: "Recycling on a Cosmic Scale" - author: "K Stensbo-Smidt, KS Pedersen, C Igel" - year: 2016 - journal: "" - title: "Special section on 19th Scandinavian conference on image analysis (SCIA\ \ 2015)" author: "K Steenstrup Pedersen, RR Paulsen" @@ -571,11 +570,10 @@ author: "J Rasmussen, J Nielsen, JC Streibig, SI Olsen, KS Pedersen, JE Jensen" year: 2016 journal: "Bekæmpelsesmiddelforskning" -- title: "Image Analysis.: Proceedings. 19th Scandinavian Conference, SCIA 2015Copenhagen,\ - \ Denmark, June 15–17, 2015" - author: "RR Paulsen, KS Pedersen" - year: 2015 - journal: "19th Scandinavian Conference on Image Analysis" +- title: "Recycling on a Cosmic Scale" + author: "K Stensbo-Smidt, KS Pedersen, C Igel" + year: 2016 + journal: "" - title: "Pre-harvest assessment of perennial weeds in cereals based on images from\ \ unmanned aerial systems (UAS)" author: "JG Egilsson, KS Pedersen, SI Olsen, J Nielsen, G Ntakos, J Rasmussen" @@ -587,12 +585,13 @@ author: "RR Paulsen, KS Pedersen" year: 2015 journal: "Springer" +- title: "Image Analysis.: Proceedings. 19th Scandinavian Conference, SCIA 2015Copenhagen,\ + \ Denmark, June 15–17, 2015" + author: "RR Paulsen, KS Pedersen" + year: 2015 + journal: "19th Scandinavian Conference on Image Analysis" - title: "Nearest neighbor density ratio estimation for large-scale applications in\ \ astronomy" author: "J Kremer, F Gieseke, KS Pedersen, C Igel" year: 2015 - journal: "Astronomy and Computing 12, 67-72" -- title: "Civile Droner i Danmark: Kortlægning og teknologivurdering" - author: "A Lygum, JS Nielsen, NB Bådum, A la Cour-Harbo, JP Hansen, ..." - year: 2014 - journal: "Teknologi Rådet" \ No newline at end of file + journal: "Astronomy and Computing 12, 67-72" \ No newline at end of file