call_fts3.yml

# Forked from eKatchko/public-bioinformatics-databases

name: Process changed files

# Controls when the workflow will run
on:
  pull_request:
    branches:
      - 'main'
    paths:
      - 'databases/**.json'
  workflow_dispatch:
    inputs:
      base:
        type: string
        default: main
        required: true
      head:
        type: string
        required: true
    
    
jobs:
  # This workflow contains a single job called "changed-files"
  changed-files:
    # The type of runner that the job will run on
    runs-on: [self-hosted, fts3-client-production ]
    environment: APPROVAL_REQUIRED
    outputs:
      changed_files: ${{ steps.create-matrix.outputs.matrix }}

    # Steps represent a sequence of tasks that will be executed as part of the job
    steps: 
    
      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0
          


      - name: Base SHA
        id: create-matrix
        run: |
              echo "matrix=($(git diff --name-only -r origin/${{ github.base_ref || github.event.inputs.base }} origin/${{ github.head_ref || github.event.inputs.head }} | grep databases/))"

        
      - name: Get changed files with git diff and send to fts3-connector
        id: git-diff
        run: |
          for file in "${steps.create-matrix.outputs.matrix[@]}"; do
            echo "Calling with $file"
            curl -H "X-AUTH-HEADER: ${{ secrets.FTS3_CLIENT_API_KEY }}" -H "Content-Type: application/json" -X POST -d @$file "${{ vars.FTS3_CLIENT_ENDPOINT }}/transfer/dry"
          done

  validate_changed_jsons:
    needs: changed-files
    strategy:
      fail-fast: false
      matrix:
          FILENAME: ${{ needs.changed-files.outputs.changed_files}}
    uses: ./.github/workflows/validate_database_json.yml
    with:
          FILENAME: ${{ matrix.FILENAME }}
    secrets: inherit