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Here is the error message when performing: pip install -e .
Building wheel for ssm (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /home/nistrate/Desktop/myPython/git/ssmdm_git/venv/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-z13hh_zy/ssm/setup.py'"'"'; __file__='"'"'/tmp/pip-install-z13hh_zy/ssm/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bjz3_4qg
cwd: /tmp/pip-install-z13hh_zy/ssm/
Complete output (7 lines):
USE_OPENMP False
usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
or: setup.py --help [cmd1 cmd2 ...]
or: setup.py --help-commands
or: setup.py cmd --help
error: invalid command 'bdist_wheel'
----------------------------------------
ERROR: Failed building wheel for ssm
Running setup.py clean for ssm
Failed to build ssm
The installation finishes, however when running either notebook importing errors appear.
ex: ImportError: cannot import name 'logsumexp' from 'autograd.scipy.misc'
Here are the exact steps used for installation:
create a virtual environment: python3 -m venv venv
activate set virtual environment: source venv/bin/activate
install numpy and cython as suggested in ssm package: pip install numpy cython
if I skip this step installation stops due to lack of these 2 packages.
Follow installation instructions:
git clone https://github.com/davidzoltowski/ssmdm.git
cd ssmdm
pip install -e .
The text was updated successfully, but these errors were encountered:
Solution: The installation issue disappears if one works in the same environment used by a successfully installed [ssm repo].(https://github.com/lindermanlab/ssm)
NOTE: to avoid future git issues, do not clone the ssmdm into the ssm git folder.
Here is the error message when performing:
pip install -e .
The installation finishes, however when running either notebook importing errors appear.
ex:
ImportError: cannot import name 'logsumexp' from 'autograd.scipy.misc'
Here are the exact steps used for installation:
python3 -m venv venv
source venv/bin/activate
pip install numpy cython
if I skip this step installation stops due to lack of these 2 packages.
The text was updated successfully, but these errors were encountered: