From 3c4ecb160797038e5b82d5939fe92f16d5582081 Mon Sep 17 00:00:00 2001 From: "David A. van Leeuwen" Date: Sun, 1 Mar 2020 12:34:13 +0100 Subject: [PATCH] Add verions of dependencies, fixes #50--#60 --- Manifest.toml | 355 -------------------------------------------------- Project.toml | 15 ++- 2 files changed, 14 insertions(+), 356 deletions(-) delete mode 100644 Manifest.toml diff --git a/Manifest.toml b/Manifest.toml deleted file mode 100644 index d3966b4..0000000 --- a/Manifest.toml +++ /dev/null @@ -1,355 +0,0 @@ -# This file is machine-generated - editing it directly is not advised - -[[Arpack]] -deps = ["BinaryProvider", "Libdl", "LinearAlgebra"] -git-tree-sha1 = "07a2c077bdd4b6d23a40342a8a108e2ee5e58ab6" -uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" -version = "0.3.1" - -[[Base64]] -uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" - -[[BinDeps]] -deps = ["Compat", "Libdl", "SHA", "URIParser"] -git-tree-sha1 = "12093ca6cdd0ee547c39b1870e0c9c3f154d9ca9" -uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee" -version = "0.8.10" - -[[BinaryProvider]] -deps = ["Libdl", "Logging", "SHA"] -git-tree-sha1 = "8153fd64131cd00a79544bb23788877741f627bb" -uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" -version = "0.5.5" - -[[CSV]] -deps = ["CategoricalArrays", "DataFrames", "Dates", "Mmap", "Parsers", "PooledArrays", "Profile", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "078801ccf5a644df31cef99c9add46107b94aba5" -uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.5.6" - -[[CategoricalArrays]] -deps = ["Compat", "Future", "JSON", "Missings", "Printf", "Reexport"] -git-tree-sha1 = "26601961df6afacdd16d67c1eec6cfe75e5ae9ab" -uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.5.4" - -[[Clustering]] -deps = ["Dates", "Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase", "Test"] -git-tree-sha1 = "5c4c26ffc9075f5a425efdc6e40c6f8f11fa52ec" -uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.13.1" - -[[CodecZlib]] -deps = ["BinaryProvider", "Libdl", "Test", "TranscodingStreams"] -git-tree-sha1 = "36bbf5374c661054d41410dc53ff752972583b9b" -uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.5.2" - -[[Compat]] -deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "84aa74986c5b9b898b0d1acaf3258741ee64754f" -uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "2.1.0" - -[[DataFrames]] -deps = ["CategoricalArrays", "Compat", "IteratorInterfaceExtensions", "Missings", "PooledArrays", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "StatsBase", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "7c0f86a01be0f77cc7f3f9096ed875f1217487e1" -uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "0.18.4" - -[[DataStructures]] -deps = ["InteractiveUtils", "OrderedCollections", "Random", "Serialization", "Test"] -git-tree-sha1 = "ca971f03e146cf144a9e2f2ce59674f5bf0e8038" -uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.15.0" - -[[DataValueInterfaces]] -git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" -uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" -version = "1.0.0" - -[[Dates]] -deps = ["Printf"] -uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" - -[[DelimitedFiles]] -deps = ["Mmap"] -uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" - -[[Distances]] -deps = ["LinearAlgebra", "Printf", "Random", "Statistics", "Test"] -git-tree-sha1 = "a135c7c062023051953141da8437ed74f89d767a" -uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.8.0" - -[[Distributed]] -deps = ["Random", "Serialization", "Sockets"] -uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" - -[[Distributions]] -deps = ["LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] -git-tree-sha1 = "4ae0ff1a3a556383f7b1b004f5fb964b26ac96c9" -uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.20.0" - -[[EzXML]] -deps = ["BinaryProvider", "Libdl", "Pkg", "Printf", "Test"] -git-tree-sha1 = "ad00b79cca4bb3eabb4209217859c553af4401f5" -uuid = "8f5d6c58-4d21-5cfd-889c-e3ad7ee6a615" -version = "0.9.1" - -[[FileIO]] -deps = ["Pkg"] -git-tree-sha1 = "351f001a78aa1b7ad2696e386e110b5abd071c71" -uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.0.7" - -[[Future]] -deps = ["Random"] -uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" - -[[InteractiveUtils]] -deps = ["Markdown"] -uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" - -[[IteratorInterfaceExtensions]] -git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" -uuid = "82899510-4779-5014-852e-03e436cf321d" -version = "1.0.0" - -[[JLD2]] -deps = ["CodecZlib", "DataStructures", "FileIO", "LinearAlgebra", "Mmap", "Printf", "Random", "Test"] -git-tree-sha1 = "3ba90ff93e1d5b9b2103588051c2d349fae54dac" -uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.1.2" - -[[JSON]] -deps = ["Dates", "Distributed", "Mmap", "Sockets", "Test", "Unicode"] -git-tree-sha1 = "1f7a25b53ec67f5e9422f1f551ee216503f4a0fa" -uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.20.0" - -[[LibGit2]] -uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" - -[[Libdl]] -uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" - -[[LinearAlgebra]] -deps = ["Libdl"] -uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" - -[[Logging]] -uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" - -[[Markdown]] -deps = ["Base64"] -uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" - -[[Missings]] -deps = ["SparseArrays", "Test"] -git-tree-sha1 = "f0719736664b4358aa9ec173077d4285775f8007" -uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28" -version = "0.4.1" - -[[Mmap]] -uuid = "a63ad114-7e13-5084-954f-fe012c677804" - -[[Mocking]] -deps = ["Compat", "Dates"] -git-tree-sha1 = "4bf69aaf823b119b034e091e16b18311aa191663" -uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.5.7" - -[[NearestNeighbors]] -deps = ["Distances", "LinearAlgebra", "Mmap", "StaticArrays", "Test"] -git-tree-sha1 = "f47c5d97cf9a8caefa47e9fa9d99d8fda1a65154" -uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.3" - -[[OrderedCollections]] -deps = ["Random", "Serialization", "Test"] -git-tree-sha1 = "c4c13474d23c60d20a67b217f1d7f22a40edf8f1" -uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.1.0" - -[[PDMats]] -deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"] -git-tree-sha1 = "8b68513175b2dc4023a564cb0e917ce90e74fd69" -uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.9.7" - -[[Parsers]] -deps = ["Dates", "Test"] -git-tree-sha1 = "db2b35dedab3c0e46dc15996d170af07a5ab91c9" -uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "0.3.6" - -[[Pkg]] -deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"] -uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" - -[[PooledArrays]] -git-tree-sha1 = "6e8c38927cb6e9ae144f7277c753714861b27d14" -uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "0.5.2" - -[[Printf]] -deps = ["Unicode"] -uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" - -[[Profile]] -deps = ["Printf"] -uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" - -[[QuadGK]] -deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "438630b843c210b375b2a246329200c113acc61b" -uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.1.0" - -[[RData]] -deps = ["CategoricalArrays", "CodecZlib", "DataFrames", "Dates", "FileIO", "Test", "TimeZones"] -git-tree-sha1 = "bfb88b9c5befb0d196be0843372a198d460d0cfc" -uuid = "df47a6cb-8c03-5eed-afd8-b6050d6c41da" -version = "0.6.0" - -[[RDatasets]] -deps = ["CSV", "CodecZlib", "DataFrames", "FileIO", "Printf", "RData", "Reexport"] -git-tree-sha1 = "f701bd7dc55cba37dd81a7053c20aadfde425ad0" -uuid = "ce6b1742-4840-55fa-b093-852dadbb1d8b" -version = "0.6.2" - -[[REPL]] -deps = ["InteractiveUtils", "Markdown", "Sockets"] -uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" - -[[Random]] -deps = ["Serialization"] -uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" - -[[Reexport]] -deps = ["Pkg"] -git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" -uuid = "189a3867-3050-52da-a836-e630ba90ab69" -version = "0.2.0" - -[[Requires]] -deps = ["Test"] -git-tree-sha1 = "f6fbf4ba64d295e146e49e021207993b6b48c7d1" -uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "0.5.2" - -[[Rmath]] -deps = ["BinaryProvider", "Libdl", "Random", "Statistics", "Test"] -git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9" -uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" -version = "0.5.0" - -[[SHA]] -uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" - -[[ScikitLearnBase]] -deps = ["Compat", "LinearAlgebra", "Random", "Statistics", "Test"] -git-tree-sha1 = "0e27caac9a456b531193117c538d739d2d6e91c2" -uuid = "6e75b9c4-186b-50bd-896f-2d2496a4843e" -version = "0.4.1" - -[[Serialization]] -uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" - -[[SharedArrays]] -deps = ["Distributed", "Mmap", "Random", "Serialization"] -uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" - -[[Sockets]] -uuid = "6462fe0b-24de-5631-8697-dd941f90decc" - -[[SortingAlgorithms]] -deps = ["DataStructures", "Random", "Test"] -git-tree-sha1 = "03f5898c9959f8115e30bc7226ada7d0df554ddd" -uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "0.3.1" - -[[SparseArrays]] -deps = ["LinearAlgebra", "Random"] -uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" - -[[SpecialFunctions]] -deps = ["BinDeps", "BinaryProvider", "Libdl", "Test"] -git-tree-sha1 = "0b45dc2e45ed77f445617b99ff2adf0f5b0f23ea" -uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "0.7.2" - -[[StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "db23bbf50064c582b6f2b9b043c8e7e98ea8c0c6" -uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "0.11.0" - -[[Statistics]] -deps = ["LinearAlgebra", "SparseArrays"] -uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" - -[[StatsBase]] -deps = ["DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics"] -git-tree-sha1 = "8a0f4b09c7426478ab677245ab2b0b68552143c7" -uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.30.0" - -[[StatsFuns]] -deps = ["Rmath", "SpecialFunctions", "Test"] -git-tree-sha1 = "b3a4e86aa13c732b8a8c0ba0c3d3264f55e6bb3e" -uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.8.0" - -[[SuiteSparse]] -deps = ["Libdl", "LinearAlgebra", "SparseArrays"] -uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" - -[[TableTraits]] -deps = ["IteratorInterfaceExtensions"] -git-tree-sha1 = "b1ad568ba658d8cbb3b892ed5380a6f3e781a81e" -uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" -version = "1.0.0" - -[[Tables]] -deps = ["DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "Requires", "TableTraits", "Test"] -git-tree-sha1 = "c93aafd5c45f850c653ec1c45857ba2151835f95" -uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "0.2.7" - -[[Test]] -deps = ["Distributed", "InteractiveUtils", "Logging", "Random"] -uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" - -[[TimeZones]] -deps = ["Dates", "EzXML", "Mocking", "Printf", "Serialization", "Unicode"] -git-tree-sha1 = "859bfc1832ea52e413c96fa5c92130516db62bdb" -uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "0.9.1" - -[[TranscodingStreams]] -deps = ["Random", "Test"] -git-tree-sha1 = "a25d8e5a28c3b1b06d3859f30757d43106791919" -uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.4" - -[[URIParser]] -deps = ["Test", "Unicode"] -git-tree-sha1 = "6ddf8244220dfda2f17539fa8c9de20d6c575b69" -uuid = "30578b45-9adc-5946-b283-645ec420af67" -version = "0.4.0" - -[[UUIDs]] -deps = ["Random", "SHA"] -uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" - -[[Unicode]] -uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" - -[[WeakRefStrings]] -deps = ["Random", "Test"] -git-tree-sha1 = "9a0bb82eede528debe631b642eeb48a631a69bc2" -uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" -version = "0.6.1" diff --git a/Project.toml b/Project.toml index dfbe787..85d7b52 100644 --- a/Project.toml +++ b/Project.toml @@ -1,6 +1,6 @@ name = "GaussianMixtures" uuid = "cc18c42c-b769-54ff-9e2a-b28141a64aae" -version = "v0.3.1" +version = "0.3.2" [deps] Arpack = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" @@ -22,3 +22,16 @@ SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" + +[compat] +PDMats = "0.9" +StatsBase = "0.32" +SpecialFunctions = "0.10" +FileIO = "1.2" +Clustering = "0.13" +RDatasets = "0.6" +ScikitLearnBase = "0.5" +Compat = "3.6" +Distributions = "0.22" +Arpack = "0.4" +JLD2 = "0.1"