diff --git a/_episodes/03-verifying-instance.md b/_episodes/03-verifying-instance.md index 907462c5..e9e53f94 100644 --- a/_episodes/03-verifying-instance.md +++ b/_episodes/03-verifying-instance.md @@ -283,7 +283,7 @@ You can end sessions: By default `tmux` is not installed in most cloud Linux instances. However when you start a new instance, you can install new software packages using Package Managers like YUM (for Red Hat and Centos instances) or APT (for Debian or Ubuntu instances). -## Caution +> ## Caution > In this lesson, you are using an Amazon instance owned by someone else, so you *won't* be able to install packages, but > we'll show you how to use APT (Advanced Package Tool) to find packages, so you know how to do it when you launch your own > instance. @@ -305,7 +305,7 @@ $ On our system, searching for tmux only gives one result, and it is already installed. -## Exercise +> ## Exercise > Check to see whether APT can be used to install your favorite bioinformatics program, or ones you commonly see used in your > field. If you can't think of anything, try to search for BLAST. What do you have to search for to get back the results you'd > expect? @@ -322,14 +322,14 @@ tmux/trusty,now 1.8-5 amd64 [installed] which means that it is stored in APT as tmux. -## Exercise +> ## Exercise > What are the package names for programs you need in your pipeline? Are they the same as the program name? What package name > would you need to install the old version of BLAST? {: .challenge} Once you know the package name, you could install it using `apt install`: -## Reminder +> ## Reminder > Remember, the following instructions are for demonstration only, you don't have the administrator password needed to run > these commands on your workshop instance. {: .callout}