Request for help

[mohamhedba123]

Hello GitHub Community,

I am working on a research project that involves high-throughput phenotyping of morphological orange fruits characteristics using X-Ray computed tomography (CT). I am particularly interested in any available code related to:

• Analyzing 3D images of orange fruits obtained from CT scans
• Extracting morphological features from these images
• Using deep learning techniques for image processing and analysis
• Any open-source libraries or frameworks that can facilitate this research

If anyone has developed or knows of any repositories that might be relevant to this topic, please share the links or resources.

Thank you for your assistance!

Best regards,

[nfahlgren]

Hi @mohamhedba123, this is not something PlantCV can do at the moment, but I can suggest looking at this paper by Amézquita and colleagues: https://nph.onlinelibrary.wiley.com/doi/10.1002/ppp3.10333. The code they used is available on GitHub here: https://github.com/amezqui3/vitaminC_morphology. I hope that helps!

[mohamhedba123]

Dear Noah Fahlgren Thank you very much for your prompt response and for sharing the paper by Amézquita and colleagues, as well as the GitHub repository. I appreciate your guidance and will definitely explore the resources you provided.

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On Sat, 17 Aug 2024 at 02:54, Noah Fahlgren ***@***.***> wrote: Hi @mohamhedba123 <https://github.com/mohamhedba123>, this is not something PlantCV can do at the moment, but I can suggest looking at this paper by Amézquita and colleagues: https://nph.onlinelibrary.wiley.com/doi/10.1002/ppp3.10333. The code they used is available on GitHub here: https://github.com/amezqui3/vitaminC_morphology. I hope that helps! — Reply to this email directly, view it on GitHub <#1579 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/BKAZWLXCIZT7TBLLRY4LTBTZRZDFXAVCNFSM6AAAAABMNLLTEKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDEOJUGAYDCMBVGU> . You are receiving this because you were mentioned.Message ID: ***@***.***>