test.yml

name: nf-test CI
# This workflow runs the nf-test test suite
on:
  pull_request:
  release:
    types: [published]

env:
  NXF_ANSI_LOG: false

jobs:
  test:
    name: Run ${{ matrix.profile }} pipeline test
    runs-on: ubuntu-latest
    strategy:
      matrix:
        NXF_VER:
          - "latest-stable"
        profile: ["docker"]
    steps:
      - name: Check out pipeline code
        uses: actions/checkout@v2

      - uses: actions/cache@v2
        with:
          path: /usr/local/bin/nextflow
          key: ${{ runner.os }}
          restore-keys: |
            ${{ runner.os }}-nextflow-

      - name: Install Nextflow
        uses: nf-core/setup-nextflow@v1
        with:
          version: "${{ matrix.NXF_VER }}"

      - name: Install nf-test
        run: |
          wget -qO- https://code.askimed.com/install/nf-test | bash
          sudo mv nf-test /usr/local/bin/

      - name: Run nf-test
        run: nf-test test --profile=${{ matrix.profile }} tests/*nf.test