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RELEASE
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OJS 3.3.0 Release Notes
Git tag: 3_3_0-13
Release date: October 4, 2022
=============================
Configuration Changes
---------------------
See config.TEMPLATE.inc.php for a description and examples of all supported
configuration parameters.
- An allowed_hosts option was added to protect against HOST injection attacks.
We recommend configuring this setting! See "Recommended Configuration" in
docs/README.md for details. (https://github.com/pkp/pkp-lib/issues/7649)
- The proxy configuration settings have changed. Please review the [proxy]
section in config.TEMPLATE.inc.php and adapt your settings in config.inc.php
as needed.
- The db.persistent option for persistent database connections has been removed.
- The db.collation option for configuring a database connection collation has
been added (default: utf8_general_ci)
New config.inc.php parameters added for OAuth-based SMTP authorization:
(see https://github.com/PHPMailer/PHPMailer/wiki/Using-Gmail-with-XOAUTH2)
- email.smtp_authtype: See PHPMailer's AuthType setting
- email.smtp_oauth_provider
- email.smtp_oauth_email
- email.smtp_oauth_clientid
- email.smtp_oauth_clientsecret
- email.smtp_oauth_refreshtoken
3.3.0-13 Build
--------------
#8299: Use helper method in galley grids
#8307: Validate author IDs against submissions/publications
3.3.0-12 Build
--------------
#7190: Issues with the NativeImportExportPlugin
#7310: Adding reviewer does not include required country field for created user.
#7330: Images aren't handled correctly on the front end of HTML galleys in versioned articles
#7373: Set httpOnly flag on session cookie
#7485: ArticleReportPlugin shows metadata in the submission's locale instead of the current locale
#7528: Crossref deposits fail when surname is missing
#7546: PKPAuthor::getLocalizedGivenName() falls back to default locale when none provided
#7595: Valid special characters are stripped from DOI suffix
#7705: Files not selected for promotion by default
#7893: Submission wizard form allows entry in languages not supported by submissions
#7894: Recommend-only option disappears when looking for editors to assign
#7914: Enable external access to the plugin URLs for private journals
#8007: The ACron plugin isn't reloading the scheduled tasks when a plugin is enabled/disabled
#8035: initData hooks not fired in SeriesForm and CategoryForm
#8041: Error when adding a Note in the "Activity Log & Notes"
#8042: Send email to Reviewer fails
#8048: Can't upload review files when in submission workflow
#8055: Stage participants API request fails
#8059: Unexpected error message after trying to close modal window
#8067, #8068, #8069: Can't upload/select when in submission's Copyediting workflow
#8086: Subscriptions belonging to users with no country set are not included in the subscription report
#8107: NativeImportExport plugin references OMP
#8119: Remove duplicated locale keys
#8137: XML import fails with error: Submission file added to review round that does not exist
#8187: Site and journal titles not escaped in back-end template
#8189: incomplete_count calculation does not account for cancelled review assignment
#8202: PKPAuthorForm: required locale for author metadata is UI instead of submission locale
#8241: Auther full name exposed to reviewers via editorial descision email templates in double blind review
#8247: One-click Reviewer Access provides full access to reviewer account
#8266: Wrong German translation for username variable
3.3.0-11 Build
--------------
#2169: Mailing Address should not be required in settings
#6209: Multiple use of id="setup-button" in website settings
#7317: CSV user export includes roles from other journals
#7604: Add ability to include user/context with CLI request
#7651: Fatal error when trying to load PKPXMLParser
#7716: Hide DB password in the administration "system info" page
#7739: Improve multimodal publishing with OJS
#7744: Ensure email template variables are properly filtered
#7751: Error if on private site password protected
#7773: Import XML missing filesize attribute to file node causes confusing fatal error
#7776: Configuration parameters get truncated if they are too long
#7793: Allow for plugins to describe support for fuzzy or wildcarded versions
#7794: Fix download filenames when encoded into content headers
#7816: Fatal error when deleting a submission
#7820: OJS: PHP Fatal error: Declaration of SubmissionChecklistForm::initData($args) must be compatible with Form::initData()
#7828: Submission files and db entries are not deleted after being rejected during upload process
#7861: Fix fatal error with pickier PHP release and array_intersect
#7864: Full title in page title and DC.Title
#7881: User verification process failing with internal exception
#7895: fatal error when thanking a reviewer
#7930: Ensure umask is respected in file creation
#7935: Stop using deprecated fgetss() function
#7943: Typo in getUsersWithNoRole query
#7958: 3.3.0 installs a locale column in the publications table that should have been removed
3.3.0-10 Build
-------------
#7749: Resolve upgrade issue with latest 3.2.x ORCID profile plugin
#7739: Add MIME type hint for Javascript files
3.3.0-9 Build
-------------
#7649: Add support for limiting allowed hosts
#7685: Add Authorization header support to API interactions
#7580: Fatal error when importing XML article in PHP8
#7681: Add Publication object to publication forms so hooks can use it
#7664: Fatal error when trying to delete section
#7654: admin page does not refresh when removing a context
#7613: Keyword auto complete not working while submitting a preprint/book/submission
#7471: Upgrade optimizations: submission locales, submission event logs, delete old revisions
#7538: Task list is not sorted with most recent tasks at the top
#7474: WMV files are downloaded as ASX files in Firefox
#7607: Dublin Core subject tag only shows last keyword when more than one keyword entered
#7620: DataCite plugin form CSRF error
#7506: Unable to Upload/Select Files from Copyediting stage (fix ineffective)
#7594: Submitted Competing Interest data can go missing
#7605: Submission wizard asks for languages that are not enabled
#7371: Add missing CSRF checks
#7266: Assigned articles missing from future issues after upgrade to OJS 3.3.0-8
#7596: No access granted for non-expiring subscription
#7590: Resolve custom issue ordering error with PostgreSQL on publish
#7213: No email is sent when creating a new announcement
#7549: Author submission dashboard shows wrong version number
#7552: Typo in deprecated ArticleHandler::downloadSuppFile()
#7534: Cancelling or unassigning a reviewer who is also an editor should restore editor's access to submission
#7509: Stage assignments permit metadata to be edited through the API even when permission has been revoked
#7510: Possible to publish a submission in the review stage
#7284: Missing rights for internal reviewer to download files.
#7475: Issue table of contents has extra margins on homepage
#6122: Recommend By Similarity Plugin doesn't work as expected
#7453: Activity Log fails to load when a file has been uploaded to a discussion message that was deleted
#7450: tasks cannot be marked as read/unread or deleted
#7419: Retrieving publications in alphabetically ordered category when changing language
#6991: Slow queries on the user management page
#7407: Error when searching for a keyword in a language not enabled in the UI
#7217: Default user search does not include username
#7420: Left-to-Right (LTR) languages have UX issue on forms
#7378: Resolve reflected XSS issues
#7363: Cancelled review assignments included in count of active reviews
#7344: CSS file mimetype not correctly recognized
#7168: Unable to pick a year in the advanced filters of the search form
#7277: Discussion participants include declined open reviewers
#7275: Can't upgrade to 3.2.x on PHP 8 due to use of get_magic_quotes_runtime
#7236: Copyright info not published using quicksubmit plugin
#7267: Allow period/full-stop in url paths
#7281: Redundant and not escaped special characters in locale files
#6828: New sections added to an Issue can't be custom ordered if the issue has already been custom ordered
#4904: Update log handling to ensure metrics are calculated correctly across versions
#5740: "Galleys" section doesn't load
3.3.0-8 Build
-------------
#7240: Cancelling a discussion sometimes leaves an empty placeholder
#7232: Link to report broken in report plugins
#7214: OAI resumption token empty after first page of results
#7194: ImportExportPlugins do not export PubIds via ScheduledTaskTool
#7181: Provide OJS/OMP/OPS version number when requesting plugin gallery list
#7174: ReCAPTCHA proxy is misconfigured
#7152: Journal path of "files" has unexpected behaviour
#7138: OJS don't replace the galley postfix in the url
#6986: HTML entities displayed in journal title by citationStyleLanguage plugin
3.3.0-7 Build
-------------
#7121: Call to undefined function create_function
#7109: Use keywords (and subjects) in DataCite export
#7108: The pubIds plugins not loaded for CLI in ImportExportPlugins
#7102: Language parameter user.authorization.journalDoesNotPublish does not exist.
#7098: Custom email templates lost upon changing language configuration
#7093: Error in XML Schema for Import/Export
#7090: Warning in administration interface about latestVersionInfo
#7078: Dropzone.js causes upload timeouts on large files
#7076: ReviewFormElement::getMultipleResponsesElementTypes() cannot be called statically
#7071: PostgreSQL error upgrade from 3.1.2 to 3.3.0-6
#7015: PayPal payment fails for amounts greater than 999
#7004: Document the REST API endpoints for announcements
#6944: User search phrases should match against the user's preferred name field
#6898: Diacritics are stripped from filenames when downloading
#6747: List of journals inside the Dashboard in unsorted
#6469: Exporting users "Slim application error"
#5971: Medra Issue export does not validate against XSD
3.3.0-6 Build
-------------
#6986: HTML entities displayed in journal title by citationStyleLanguage plugin
#6979: [OJS 3.3.0.3] Unassigned submission list not working
#6962: OAI resumption tokens never delivered
#6956: mEDRA Export: PHP Fatal error after upgrade
#6953: Replace getCCLicenseBadge static calls with instance calls
#6952: Remove file naming test from the shared library
#6949: Issues can be served by ID in the wrong journal
#6938: Email templates can not be saved because of data from disabled locales
#6931: Clear issue object DOIs does not delete publication DOIs
#6909: mEDRA: the calculation of the file size is different for issue and article galleys
#6898: Diacritics are stripped from filenames when downloading
#6887: Crossref status check errors in 3.3.0-x
#6772: Upgrade from 3.2 to 3.3, All Journal custom block become same from last journal custom block
#6683: Ordering of sidebar blocks changed upon visiting the settings form
3.3.0-5 Build
-------------
#6910: Use proper identification when issuing HTTP requests
#6892: View more accessible button label is broken in 3.3
#6888: Ensure Composer dependency test/example code is safe
#6886: crossrefReferenceLinking plugin: consider all references settings
#6879: Site settings not visible for usage statistics plugin when only one context exists
#6873: Saving the Website - Appearance - Setup form auto-focuses on Homepage Image Alt Text field
#6872: Article links broken after update to 3.3.0-4
#6871: Session destruction (and duplicate) warnings in the PHP error log
#6870: SQL logic error in upgrade when using PostgreSQL
#6862: Author name is not localized in How-to-Cite citation
#6757: Supported form locales can be serialized as associative array
3.3.0-4 Build
-------------
#6860: Make submission deletion more accepting of missing files
#6857: Add error handling for nonexistent reviewer access
#6852: [OJS 3.3] Crossref export fails with unexpected ORCID error
#6847: Call to undefined method SubEditorsDAO::getBySectionId() in Series.inc.php:271
#6844: Bump pdf.js to v2.6.347
#6824: TinyMCE can overwrite public images in other contexts
#6808: Untranslated locale key notification.type.submissionNewVersion in new version notification email
#6803 #6807: OAI "earliest datestamp" is always now
#6801: Links to dependent files referenced in HTML/JATS XML galleys are broken
#6800: Backend Favicon defaults to PKP logo Hosting
#6798: Fatal error when removing announcement types
#6793: Updates to a customised journal stylesheet (css file) are not reflected in the HTML source
#6784: Crossref validation error when the author only has a given name
#6780: Wrong nesting in pkp-lib/templates/frontend/pages/navigationMenuItemViewContent.tpl
#6768: Access denied when clicking on "Administration" menu
#6762: Access denied for journal editor when adding new file in Request revisions dialog
#6761: Non-HTTP(S) links entered into rich editor fields become page-relative
#6753: Force validation of "https://" for ORCID IDs in user profile.
#6752: Incompatibility with PHP 8.0: mb_substitute_character() no longer supports passing empty string
#6751: Upgrade failure with PHP 8.0: conflicts with XMLParser class
#6750: Plugin search in gallery misbehaving
#6748: Cannot create Announcements: General error: 1364 Field 'setting_type' doesn't have a default value
#6743: Review files pointing to non-existing submission file may break upgrade to 3.3
#6741: Validation errors are not displayed when uploading files during submission
#6731: Failed assert warning in Section settings page
#6703: Unable to upgrade 3.3.0.2: Call to a member function getConnection() on null
#6663: HTML galley does not pick up the dependent CSS
#6563: Authorization header with JWT can cause fatal error
#5844: Enable rich text in site-wide "About" field
#5365: OAuth for Gmail Access
#4834: Re-add "blind copy reviewers on editor decision" feature
3.3.0-3 Build
-------------
#6726: Privacy statement page error 500
#6722: Monograph export as native xml fails
#6718: SECURITY: Revisit Update Illuminate Database library for GHSA-3p32-j457-pg5x (#6632)
#6710: Upgrade to 3.3.0.2 fails when a journal has no supportedFormLocales
#6703: Unable to upgrade 3.3.0.2: Call to a member function getConnection() on null
#6643: Lack of notifications after the author uploads revisions
#6563: Authorization header with JWT can cause fatal error
New Features
------------
#2493 #6264 #6093: Replace ADODB toolset with Illuminate/Database
#4017 #6536: Send an email to all users with a specific role
#4796: Filter email templates by workflow stage
#5181 #5182 #5183 #5184 #5185 #5986 #5187 #5188 #5189 #5619 #5917 #6038: Accessibility improvements
#5275: Provide averages for editorial statistics
#5388: Submission keywords are not indexed/searchable
#5540: Date formats should allow different configurations for each language
#5565: Allow editors and editorial assistants to preview an article before it is published
#5702: Ability to disable submissions
#5865: Refactor backend UI
#5963: Replace FileWrapper with 3rd-party implementation (Flysystem)
#5982: Filter submissions by assigned editor
#6054: Add a filter by assigned issue to submission lists
#6057: Improve file upload during submission
#6097 #6175 #6223: Introduce Guzzle for HTTP client abstraction
#6146: [OPS] Allow submission search by ORCID ID
#6181: Support text directionality in TinyMCE for RTL languages
#2993: reCaptcha not working from China
#5642: Add CSV-based user export
Bug Fixes
---------
#490: Fix open access notification
#2773: Restore use of browser history for tabbed navigation
#3572: Remove OJS 2.x upgrade tools
#3933: Issues with pages related to subscription
#3948: webfeed Plugin rss2 missing XML namespace and date time issue
#4220: Add BOM (byte order mark) to fix UTF-8 in Excel
#4414: Context path property creates conflict when disable_path_info is enabled
#4895: Use inclusive terminology
#4915: Reviewers' identities visible to other reviewers in discussion
#4930: Option to hide title of section from issue table of contents broke in default theme
#4991: Add Category to article page
#5090: Remove XML-based locale file fallback
#5121: journals with no custom base_url ignored if at least one journal in an install has one when stats are processed
#5185: Add autocomplete fields to registration and login forms.
#5288: Performance issue using LIMIT and OFFSET in search users query
#5408: Payments tab does not appear when payments are enabled in settings
#5445: Test licenseUrl context setting
#5592: Block plugins and cacheing problem
#5610: Minimal Wording Changes for Emphasis on Preprints
#5772: Add upgrade script to reset array keys for context locales
#5819: Unable to revert "Reject" decision
#5843: User object in payment records for past users null
#5856: Review Form not getting the correct title and description
#5863: Access alert for Submissions with Pre-review discussions of Editorial Team
#5869: Clean up plugin installation error handling
#5878: Review and improve PluginRegistry
#5948: Write integration tests for unpublishing an issue
#5954: Redirect fails when urlPath has been changed
#5961: enabling crossrefReferenceLinking (even master branch) makes doi disappear
#5984: Suggested improvements for About this Publishing System page
#6000: Undefined const SCHEMA_PUBLICATION during upgrade
#6006: DOI/Crossref Cypress Tests
#6007: User roles can be passed to the browser as an object instead of array
#6008: PHP Notice when compiling LESS from a theme plugin
#6011: Imported submissions throw off editorial statistics
#6021: Crossref plugin not receiving title metadata in most recent 3.2.1 testing.
#6022: PostgreSQL upgrade to 3.2.0 resets all submissions to unpublished
#6026: Submission deletion can delete author records in other submissions
#6029: Report Generator doesn't return any results when custom range is selected with a single day
#6033: Announcements can be viewed even when disabled
#6035: Plugin install does not work across filesystems
#6041: License override formatting error
#6043: Notice about no section editors appears even when section editors exist
#6056: Version number showing Publication ID for authors
#6058: Unread notifications aren't being shown on the front-end
#6060: If a title prefix is given for a single locale, it is shown with all article title translations
#6064: Text color does not respond to background color selection on mobile
#6067: Submission Checklist - Reordering doesn't save
#6084: Announcement emails sent blank after upgrade
#6085: Editorial report email with wrong locale
#6095: Include OJS-specific user agent with version number in CrossRef exchanges
#6096: DB field type TEXT is cutting off long content
#6102: Submission::getSectionTitle doesn't return any value
#6105: Allow capital letters in context urlPath
#6107: "Omit the title of this section from the issue's Table of Contents" section option does not work
#6111: SQL typo in "browse by authors" feature
#6115: Enable "download all files" in production ready files grid
#6120: OMP Internal Review queries are placed in External Review
#6134: The statistics notification is sent to roles that have no access to the interface
#6145: Move Report Generator out of Tools
#6148: Error for custom blocks in side bar due to automatic name addition
#6165 #6168: Announcement notification issues
#6183: Sitemap does not include articles
#6184: Can't use array values in theme options
#6189: Problem when submitting reviews
#6196: Fix test/build for changed Google closure compiler installation process
#6203: Revenge of the edit links
#6206: Ensure stage in URL matches file ID
#6207: Ensure that served articles are matched against the request's context ID
#6212: Quick Submit Plugin notification error problem
#6213: Error in upgrade from OJS 3.1.x to 3.2.x on submissionSubject (controlled vocabulary) data
#6226: CSRF checks missing from import/export plugin upload bounce requests
#6229: Subscription end dates are not inclusive
#6234: Authors should not see the overdue reviews warning in submission lists
#6246: Let iframe use relative URL instead of absolute
#6259: copyrightHolder should be assigned as localized data
#6262: Broken catalog page in OMP with PostgreSQL
#6265: New sample file for Native Import/export
#6269: Submission Hyperlink
#6276: QuickSubmit Plugin: Keywords in a non-primary locale can’t be deleted
#6284: During upgrade to 3.3 email templates' stage_id is populated before being created
#6300: PHP warning with cancelled reviews
#6301 #6321: Add indexes/optimize SQL for performance
#6320: [OJS] CAST AS CHAR i postgres
#6330: Lens Galley XML views not tracked in usage statistics
#6331: Native citations import doesn't break citations string into single citations
#6337: Foreign key constraint error during upgrade in review_round_files.submission_file_id
#6350: Problems with enabling/disabling usage event and usage stats plugins from plugin grid
#6359: Submission files migration does not update item_views
#6370: Migration fails upon changing item_views.assoc_id from varchar to bigint
#6381: Remove OJS-specific considerations from pkp-lib
#6382: Resolve PHP warning: SubmissionFileEventLogDAO::getById vs EventLogDAO::getById
#6387: Restore keywords tests
#6390: Issue filter leads to fatal error
#6391: Confusion when article assigned to issue but not scheduled for publication
#6392: Create and delete discussion leads to fatal error
#6393: Author can not access review stage
#6396: Editor can not share files to be reviewed with reviewer
#6397: Use display() instead of fetch() to pass front-end templates to Smarty
#6399: Can not add or edit a category
#6405: cannot create an issue galley
#6406: Unable to pick a year in the advanced filters of the search form
#6408: User-facing category page is inaccessible
#6409: Payments menu does not display when enabled
#6411: Datacite plugin not up to date : different credentials for test site vs prod site
#6414: error when creating a counter AR1 report
#6418: Fix test scripts for MySQL 8.x
#6419: Publication APC Fee indication not present
#6420: Institutional Subscription: failure to add IP-range
#6421: Dependent file upload fails when confirm revision is detected
#6422: ONIXCodelist retrieval fails when running under Windows server
#6426: PHP server freeze and constraint violation when creating/editing issues
#6429: Export users to CSV form loads all user groups
#6439: Adding new roles
#6441 #6442 #6444 #6447 #6448: DOI plugin setting issues
#6451: Can not change journal's primary language
#6457: Disentangle beacon and upgrade warning disables
#6458: Discussions Grid produces a warning
#6462: Inconsistency in JWT (API key) encoding/decoding
#6467: "Reload defaults" for language invalidates $contextPath variable in "for authors", "for readers", etc.
#6478: Remove use of Google Font CDN
#6482: Section editor can upload to unassigned review round
#6483: Default theme exceeds viewport width in some cases
#6495: Incorrect URLs in default context settings
#6502: Missing files break issue table of contents generation
#6503: OAI _getRecordsRecordSet sql query becomes very slow in larger sites
#6509: User subscriptions page is inaccessible
#6510: Non-expiring institutional subscription can't be added
#6512: web_cache = on does not work in OJS 3.2
#6516: Removing a nav menu item causes an error
#6529: Author can not upload revisions when decision is to resubmit for review
#6542: [OMP] Fix pull forward of submission stages files into Internal Review
#6548: User issue payment unlocks issue globally for users who aren't logged in
#6559: Can't mark task notifications as "New" or "Read" or "Delete"
#6564: Changing Journals in multiuser OJS throws a 404 error
#6566: move mEDRA plugin to its own repository, accessible via plugin gallery
#6594: Site-wide fall-back for the privacy notice in Admin > Site Settings not displaying properly
#6615: Submission files referencing nonexistent submissions break upgrade to 3.3
#6616: pkp/pkp-lib#6615 Remove submission_files entries that don't correspond to existing submissions
#6620: WebFeed plugin missing restriction to published content
#6621: Remote galleys are broken
#6625: two entries in the oai interface after removing a submission from TOC and rescheduling it again
#6232 #6632 #6378: Update 3rd-party dependencies
#6633: Entering a space in journal path breaks site
#6634: Block names aren't being updated to the lowercase during OJS upgrade
#6638: The fileStages filter of the submission files API is ignored for managers
#6654: The cancel button at the "Change Password" has no purpose
#6668: Public message when not accepting submissions is confusing
#6671: no router object when executing scheduled tasks
#6681: GET request to /contexts API endpoint causes 500 error