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Since we switched to v0.10, the provprocess script is giving this error:
2023-09-05 10:07:01,828 ERROR [root] (provprocess.produce_provenance_files): problem while creating graph: [Errno 2] "dot" not found in path.
Traceback (most recent call last):
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/site-packages/pydot.py", line 1923, in create
stdout_data, stderr_data, process = call_graphviz(
^^^^^^^^^^^^^^
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/site-packages/pydot.py", line 132, in call_graphviz
process = subprocess.Popen(
^^^^^^^^^^^^^^^^^
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/subprocess.py", line 1026, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/subprocess.py", line 1950, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: 'dot'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/site-packages/osa/scripts/provprocess.py", line 371, in produce_provenance_files
provdoc2graph(provdoc, str(paths["graph_filepath"]), "pdf")
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/site-packages/osa/provenance/io.py", line 199, in provdoc2graph
content = dot.create(format=fmt)
^^^^^^^^^^^^^^^^^^^^^^
File "/fefs/aswg/software/conda/envs/osa-v0.10/lib/python3.11/site-packages/pydot.py", line 1933, in create
raise OSError(*args)
FileNotFoundError: [Errno 2] "dot" not found in path.
The script was working fine for v0.9. It seems the error is related to the installation of graphviz, but installing graphviz with pip does not solve the issue.
The text was updated successfully, but these errors were encountered:
Since we switched to v0.10, the provprocess script is giving this error:
The script was working fine for v0.9. It seems the error is related to the installation of graphviz, but installing graphviz with pip does not solve the issue.
The text was updated successfully, but these errors were encountered: