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test.py Not a Test Script #2

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schackartk opened this issue Apr 19, 2021 · 0 comments
Open

test.py Not a Test Script #2

schackartk opened this issue Apr 19, 2021 · 0 comments

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@schackartk
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Typically, scripts named test.py or test_*.py are reserved for testing (e.g. via pytest). It is confusing to have the classification script named test.py, since it is not testing anything.

Please clarify if the above is incorrect. I have based this on the README.md:

To make a prediction, users' own query contigs should be edited into a ".csv" file, where every line contains a single query contig. Through test.py, RNN-VirSeeker will give a set of scores to each query contig, higher of which represents its classification result.

Which to me indicates that test.py is run to classify one's own contigs using the trained model.

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