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pump_sfd.py
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pump_sfd.py
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#!/usr/bin/env python3
import glob
import json
import logging
import os
import queue
import re
import struct
import threading
from collections import defaultdict
from typing import Any, Dict, List, Optional, Tuple
import couchstore # pylint: disable=import-error
import couchbaseConstants
import pump
from cb_bin_client import decode_collection_id, encode_collection_id
SFD_SCHEME = "couchstore-files://"
SFD_VBUCKETS = 1024
SFD_REV_META = ">QIIBB" # cas, exp, flg, flex_meta, dtype
SFD_REV_META_PRE_4_6 = ">QIIBBB" # cas, exp, flg, flex_meta, dtype, conf_res
SFD_REV_SEQ = ">Q"
SFD_DB_SEQ = ">Q"
SFD_RE = "^([0-9]+)\\.couch\\.([0-9]+)$"
# TODO: (1) SFDSource - total_msgs.
# TODO: (1) SFDSink - ensure right user for bucket_dir.
# TODO: (1) SFDSink - ensure right user for couchstore file.
class SFDSource(pump.Source):
"""Reads couchstore files from a couchbase server data directory."""
def __init__(self, opts, spec, source_bucket, source_node,
source_map, sink_map, ctl, cur):
super(SFDSource, self).__init__(opts, spec, source_bucket, source_node,
source_map, sink_map, ctl, cur)
self.done = False
self.queue = None
print('Starting sfd source: ', spec)
@staticmethod
def can_handle(opts, spec: str) -> bool:
return spec.startswith(SFD_SCHEME)
@staticmethod
def check_base(opts, spec: str) -> couchbaseConstants.PUMP_ERROR:
# Skip immediate superclass Source.check_base(),
# since SFDSource can handle different vbucket states.
return pump.EndPoint.check_base(opts, spec)
@staticmethod
def check(opts, spec: str) -> Tuple[couchbaseConstants.PUMP_ERROR, Optional[Dict[str, Any]]]:
rv, d = data_dir(spec)
if rv != 0:
return rv, None
buckets = []
for bucket_dir in sorted(glob.glob(f'{d}/*/')):
if not glob.glob(f'{bucket_dir}/*.couch.*'):
continue
bucket_name = os.path.basename(os.path.dirname(bucket_dir))
if not bucket_name:
return f'error: bucket_name too short: {bucket_dir}', None
rv, v = SFDSource.vbucket_states(opts, spec, bucket_dir)
if rv != 0:
return rv, None
buckets.append({'name': bucket_name,
'nodes': [{'hostname': 'N/A',
'vbucket_states': v}]})
if not buckets:
return f'error: no bucket subdirectories at: {d}', None
return 0, {'spec': spec, 'buckets': buckets}
@staticmethod
def vbucket_states(opts, spec, bucket_dir) -> Tuple[couchbaseConstants.PUMP_ERROR, Optional[Dict[str, Any]]]:
"""Reads all the latest couchstore files in a directory, and returns
map of state string (e.g., 'active') to map of vbucket_id to doc."""
vbucket_states: Dict[str, Any] = defaultdict(dict)
for f in latest_couch_files(bucket_dir):
vbucket_id = int(re.match(SFD_RE, os.path.basename(f)).group(1)) # type: ignore
try:
store = couchstore.CouchStore(f, 'r')
try:
doc_str = store.localDocs['_local/vbstate']
if doc_str:
doc = json.loads(doc_str)
state = doc.get('state', None)
if state:
vbucket_states[state][vbucket_id] = doc
else:
return f'error: missing vbucket_state from: {f}', None
except Exception as e:
return f'error: could not read _local/vbstate from: {f}; exception: {e}', None
store.close()
except Exception as e:
return f'error: could not read couchstore file: {f}; exception: {e}', None
if vbucket_states:
return 0, vbucket_states
return f'error: no vbucket_states in files: {bucket_dir}', None
@staticmethod
def provide_design(opts, source_spec: str, source_bucket, source_map) -> Tuple[couchbaseConstants.PUMP_ERROR,
Optional[str]]:
rv, d = data_dir(source_spec)
if rv != 0:
return rv, None
bucket_dir = f'{d}/{source_bucket["name"]}'
if not os.path.isdir(bucket_dir):
return 0, None
rv, store, _ = open_latest_store(bucket_dir, "master.couch.*", "^(master)\\.couch\\.([0-9]+)$",
"master.couch.0", mode='r')
if rv != 0 or not store:
return rv, None
rows = []
for doc_info in store.changesSince(0):
if not doc_info.deleted:
try:
doc_contents = doc_info.getContents(options=couchstore.CouchStore.DECOMPRESS)
except Exception as e:
return f'error: could not read design doc: {doc_info.id}; source_spec: {source_spec};' \
f' exception: {e}', None
try:
doc = json.loads(doc_contents)
except ValueError as e:
return f'error: could not parse design doc: {doc_info.id}; source_spec: {source_spec};' \
f' exception: {e}', None
doc['id'] = doc.get('id', doc_info.id)
doc['_rev'] = doc.get('_rev', doc_info.revSequence)
rows.append({'id': doc_info.id, 'doc': doc})
store.close()
return 0, json.dumps(rows)
def provide_batch(self) -> Tuple[couchbaseConstants.PUMP_ERROR, Optional[pump.Batch]]:
if self.done:
return 0, None
if not self.queue:
name = "c" + threading.currentThread().getName()[1:]
self.queue = queue.Queue(2)
self.thread = threading.Thread(target=self.loader, name=name)
self.thread.daemon = True
self.thread.start()
rv, batch = self.queue.get()
self.queue.task_done()
if rv != 0 or batch is None:
self.done = True
return rv, batch
def loader(self):
rv, d = data_dir(self.spec)
if rv != 0:
self.queue.put((rv, None))
return
source_vbucket_state = \
getattr(self.opts, 'source_vbucket_state', 'active')
source_nodes = self.source_bucket['nodes']
if len(source_nodes) != 1:
self.queue.put((f'error: expected 1 node in source_bucket: {self.source_bucket["name"]}', None))
return
vbucket_states = source_nodes[0].get('vbucket_states', None)
if not vbucket_states:
self.queue.put((f'error: missing vbucket_states in source_bucket: {self.source_bucket["name"]}', None))
return
vbuckets = vbucket_states.get(source_vbucket_state, None)
if vbuckets is None: # Empty dict is valid.
self.queue.put((f'error: missing vbuckets in source_bucket: {self.source_bucket["name"]}', None))
return
batch_max_size = self.opts.extra['batch_max_size']
batch_max_bytes = self.opts.extra['batch_max_bytes']
store = None
vbucket_id = None
# Level of indirection since we can't use python 3 nonlocal statement.
abatch: List[pump.Batch] = [pump.Batch(self)]
def change_callback(doc_info):
if doc_info:
# Handle the new key name spacing for collections and co
cid, key = decode_collection_id(doc_info.id.encode())
# Only support keys in the _default collection
if cid != 0:
logging.debug('Skipping as not default collection')
return
if self.skip(key, vbucket_id):
return
if doc_info.deleted:
cmd = couchbaseConstants.CMD_DCP_DELETE
else:
cmd = couchbaseConstants.CMD_DCP_MUTATION
# Deletes/tombstones may contain a body if they contain xattrs; a 'KeyError' from 'couchstore' indicates
# when this is not the case.
try:
val = doc_info.getContents(options=couchstore.CouchStore.DECOMPRESS)
except KeyError:
val = b''
try:
rev_meta_bytes = doc_info.revMeta.get_bytes()
if len(rev_meta_bytes) == 18:
conf_res = 0
cas, exp, flg, flex_meta, dtype = struct.unpack(SFD_REV_META, rev_meta_bytes)
elif len(rev_meta_bytes) == 19:
cas, exp, flg, flex_meta, dtype, conf_res = struct.unpack(SFD_REV_META_PRE_4_6, rev_meta_bytes)
else:
raise ValueError('Does not match pre- or post-4.6 format')
meta = int(doc_info.revSequence).to_bytes(8, 'big')
seqno = doc_info.sequence
nmeta = 0
msg = (cmd, vbucket_id, key, flg, exp, cas, meta, val, seqno, dtype, nmeta, conf_res)
abatch[0].append(msg, len(val))
except Exception as e:
self.queue.put((f'error: could not read couchstore file due to unsupported file format version;'
f' exception: {e}', None))
return
if (abatch[0].size() >= batch_max_size or
abatch[0].bytes >= batch_max_bytes):
self.queue.put((0, abatch[0]))
abatch[0] = pump.Batch(self)
for f in latest_couch_files(f'{d}/{self.source_bucket["name"]}'):
vbucket_id = int(re.match(SFD_RE, os.path.basename(f)).group(1))
if vbucket_id not in vbuckets:
continue
try:
store = couchstore.CouchStore(f, 'r')
store.forEachChange(0, change_callback)
store.close()
except Exception:
# MB-12270: Some files may be deleted due to compaction. We can
# safely ignore them and move to next file.
pass
if abatch[0].size():
self.queue.put((0, abatch[0]))
self.queue.put((0, None))
class SFDSink(pump.Sink):
"""Sink for couchstore in couchbase server/file/directory layout."""
def __init__(self, opts, spec, source_bucket, source_node,
source_map, sink_map, ctl, cur):
super(SFDSink, self).__init__(opts, spec, source_bucket, source_node,
source_map, sink_map, ctl, cur)
self.rehash = opts.extra.get("rehash", 0)
self.init_worker(SFDSink.run)
@staticmethod
def run(self):
destination_vbucket_state = getattr(self.opts, 'destination_vbucket_state', 'active')
vbucket_states = self.source_node.get('vbucket_states', {})
while not self.ctl['stop']:
batch, future = self.pull_next_batch() # type: pump.Batch, pump.SinkBatchFuture
if not batch:
return self.future_done(future, 0)
vbuckets = batch.group_by_vbucket_id(SFD_VBUCKETS, self.rehash)
for vbucket_id, msgs in vbuckets.items():
checkpoint_id = 0
max_deleted_seqno = 0
rv, store, store_path = self.open_store(vbucket_id)
if rv != 0:
return self.future_done(future, rv)
bulk_keys = []
bulk_vals = []
for i, msg in enumerate(msgs):
cmd, _vbucket_id, key, flg, exp, cas, meta, val, seqno, dtype, nmeta, conf_res = msg
if self.skip(key, vbucket_id):
continue
# TODO: add default collection to all keys in CC this should change to have the correct collection
key = encode_collection_id(0) + key
d = couchstore.DocumentInfo(key.decode())
flex_meta = 1
d.revMeta = struct.pack(SFD_REV_META, cas, exp, flg, flex_meta, dtype)
if len(meta) != 0:
if len(meta) > 8:
meta = meta[0:8]
if len(meta) < 8:
meta = (b'\x00\x00\x00\x00\x00\x00\x00\x00' + meta)[-8:]
d.revSequence, = struct.unpack(SFD_REV_SEQ, meta)
else:
d.revSequence = 1
if seqno:
d.sequence = int(seqno)
if cmd in [couchbaseConstants.CMD_TAP_MUTATION, couchbaseConstants.CMD_DCP_MUTATION]:
try:
v = val
if dtype & couchbaseConstants.DATATYPE_JSON:
d.contentType = couchstore.DocumentInfo.IS_JSON
# Why do this when we have a flag for it?
# if re.match('^\\s*{', v) and json.loads(v) is not None:
# d.contentType = couchstore.DocumentInfo.IS_JSON
except ValueError:
pass # NON_JSON is already the default contentType.
elif cmd in [couchbaseConstants.CMD_TAP_DELETE, couchbaseConstants.CMD_DCP_DELETE]:
v = None
else:
self.future_done(future, f'error: SFDSink bad cmd: {cmd!s}')
store.close()
return
bulk_keys.append(d)
bulk_vals.append(v)
try:
if bulk_keys and bulk_vals:
vm = vbucket_states.get(destination_vbucket_state, None)
if vm:
vi = vm.get(vbucket_id, None)
if vi:
c = int(vi.get("checkpoint_id", checkpoint_id))
checkpoint_id = max(checkpoint_id, c)
m = int(vi.get("max_deleted_seqno", max_deleted_seqno))
max_deleted_seqno = max(max_deleted_seqno, m)
rv = self.save_vbucket_state(store, vbucket_id,
destination_vbucket_state,
checkpoint_id,
max_deleted_seqno)
if rv != 0:
self.future_done(future, rv)
store.close()
return
store.saveMultiple(bulk_keys, bulk_vals,
options=couchstore.CouchStore.COMPRESS)
store.commit()
store.close()
except Exception as e:
self.future_done(future, f'error: could not save couchstore data; vbucket_id: {vbucket_id}; '
f'store_path: {store_path}; exception: {e}')
return
self.future_done(future, 0) # No return to keep looping.
def save_vbucket_state(self, store, vbucket_id,
state, checkpoint_id, max_deleted_seqno):
doc = json.dumps({'state': state,
'checkpoint_id': str(checkpoint_id),
'max_deleted_seqno': str(max_deleted_seqno)})
try:
store.localDocs['_local/vbstate'] = doc
except Exception as e:
return f'error: save_vbucket_state() failed: {e!s}'
return 0
@staticmethod
def can_handle(opts, spec: str) -> bool:
return spec.startswith(SFD_SCHEME)
@staticmethod
def check_base(opts, spec: str) -> couchbaseConstants.PUMP_ERROR:
if getattr(opts, "destination_operation", None) is not None:
return f'error: --destination-operation is not supported by this destination: {spec}'
# Skip immediate superclass Sink.check_base(),
# since SFDSink can handle different vbucket states.
return pump.EndPoint.check_base(opts, spec)
@staticmethod
def check(opts, spec: str, source_map) -> Tuple[couchbaseConstants.PUMP_ERROR, None]:
# TODO: (2) SFDSink - check disk space.
rv, dir = data_dir(spec)
if rv != 0:
return rv, None
if not os.path.isdir(dir):
return f'error: not a directory: {dir}', None
if not os.access(dir, os.W_OK):
return f'error: directory is not writable: {dir}', None
return 0, None
@staticmethod
def consume_design(opts, sink_spec, sink_map,
source_bucket, source_map, source_design) -> couchbaseConstants.PUMP_ERROR:
if not source_design:
return 0
try:
sd = json.loads(source_design)
except ValueError:
return f'error: could not parse source_design: {source_design}'
rv, d = data_dir(sink_spec)
if rv != 0:
return rv
bucket_dir = f'{d}/{source_bucket["name"]}'
if not os.path.isdir(bucket_dir):
os.mkdir(bucket_dir)
rv, store, _ = open_latest_store(bucket_dir, "master.couch.*", "^(master)\\.couch\\.([0-9]+)$",
"master.couch.1")
if rv != 0:
return rv
bulk_keys = []
bulk_vals = []
if sd:
for row in sd['rows']:
logging.debug("design_doc row: " + str(row))
doc_info = couchstore.DocumentInfo(str(row['id']))
if '_rev' in row['doc']:
doc_info.revMeta = str(row['doc']['_rev'])
del row['doc']['_rev']
doc_info.contentType = couchstore.DocumentInfo.IS_JSON
bulk_keys.append(doc_info)
bulk_vals.append(json.dumps(row['doc']))
if bulk_keys and bulk_vals:
store.saveMultiple(bulk_keys, bulk_vals) # type: ignore # TODO: Compress ddocs?
store.commit() # type: ignore
store.close() # type: ignore
return 0
def consume_batch_async(self, batch: Optional[pump.Batch]) -> Tuple[couchbaseConstants.PUMP_ERROR,
Optional[pump.SinkBatchFuture]]:
return self.push_next_batch(batch, pump.SinkBatchFuture(self, batch))
def open_store(self, vbucket_id: int):
# data_dir => /opt/couchbase/var/lib/couchbase/data/
# bucket_dir => default/
# store_path => VBUCKET_ID.couch.COMPACTION_NUM
if vbucket_id >= SFD_VBUCKETS:
return f'error: vbucket_id too large: {vbucket_id}', None, None
rv, bucket_dir = self.find_bucket_dir()
if rv != 0:
return rv, None, None
return open_latest_store(bucket_dir, f'{vbucket_id}.couch.*', SFD_RE, f'{vbucket_id!s}.couch.1', mode='c')
def find_bucket_dir(self) -> Tuple[couchbaseConstants.PUMP_ERROR, str]:
rv, d = data_dir(self.spec)
if rv != 0:
return rv, ''
bucket_dir = d + '/' + self.source_bucket['name']
if not os.path.isdir(bucket_dir):
try:
os.mkdir(bucket_dir)
except OSError as e:
return f'error: could not create bucket_dir: {bucket_dir}; exception: {e}', ''
return 0, bucket_dir
def open_latest_store(bucket_dir: str, glob_pattern: str, filter_re: str, default_name: str, mode: str = 'c') \
-> Tuple[couchbaseConstants.PUMP_ERROR, Optional[couchstore.CouchStore], str]:
store_paths = latest_couch_files(bucket_dir,
glob_pattern=glob_pattern,
filter_re=filter_re)
if not store_paths:
if mode == 'r':
return 0, None, ''
store_paths = [f'{bucket_dir}/{default_name}']
if len(store_paths) != 1:
return f'error: no single, latest couchstore file: {glob_pattern}; found: {store_paths}', None, ''
try:
return 0, couchstore.CouchStore(str(store_paths[0]), mode), store_paths[0]
except Exception as e:
return f'error: could not open couchstore file: {store_paths[0]}; exception: {e}', None, ''
def latest_couch_files(bucket_dir: str, glob_pattern: str = '*.couch.*', filter_re: str = SFD_RE) -> List[str]:
"""Given directory of *.couch.VER files, returns files with largest VER suffixes."""
files = glob.glob(f'{bucket_dir}/{glob_pattern}')
files = [f for f in files if re.match(filter_re, os.path.basename(f))]
matches = [(re.match(filter_re, os.path.basename(f)), f) for f in files]
latest: Dict[str, Tuple[int, str]] = {}
for match, file in matches:
top, _ = latest.get(match.group(1), (-1, None)) # type: ignore
cur = int(match.group(2)) # type: ignore
if cur > top:
latest[match.group(1)] = (cur, file) # type: ignore
return sorted([file for top, file in latest.values()])
def data_dir(spec: str) -> Tuple[couchbaseConstants.PUMP_ERROR, str]:
if not spec.startswith(SFD_SCHEME):
return f'error: wrong scheme in spec: {spec}', ''
dir = spec[len(SFD_SCHEME):]
if dir:
return 0, os.path.normpath(dir)
return f'error: missing dir in spec: {spec}', ''