Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ripgrep segfaults #74

Open
1 task done
BEFH opened this issue Oct 12, 2022 · 0 comments
Open
1 task done

ripgrep segfaults #74

BEFH opened this issue Oct 12, 2022 · 0 comments
Labels
bug Something isn't working

Comments

@BEFH
Copy link

BEFH commented Oct 12, 2022

Solution to issue cannot be found in the documentation.

  • I checked the documentation.

Issue

While building the directory tree, repgrep experiences multiple segfaults. Replacing the internal ripgrep with the generic version doesn't segfault, and this only happens with the conda version of code-server. I think it may be due to some issue with the build.

Here's the bug on the code-server repo:

coder/code-server#5322

Installed packages

# packages in environment at /sc/arion/work/fultob01/conda/envs/py3.9:
#
# Name                    Version                   Build  Channel
_go_select                2.3.0                       cgo    conda-forge
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                  2_kmp_llvm    conda-forge
_r-mutex                  1.0.1               anacondar_1    conda-forge
_sysroot_linux-64_curr_repodata_hack 3                   h5bd9786_13    conda-forge
aioeasywebdav             2.4.0           py39hf3d152e_1001    conda-forge
aiohttp                   3.8.3            py39hb9d737c_0    conda-forge
aiosignal                 1.2.0              pyhd8ed1ab_0    conda-forge
alsa-lib                  1.2.7.2              h166bdaf_0    conda-forge
amply                     0.1.5              pyhd8ed1ab_0    conda-forge
anyio                     3.6.1              pyhd8ed1ab_1    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
archive_goate             2.1                      py39_0    bfh
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0           py39hb9d737c_2    conda-forge
arpack                    3.7.0                hdefa2d7_2    conda-forge
arrow                     1.2.3              pyhd8ed1ab_0    conda-forge
asttokens                 2.0.8              pyhd8ed1ab_0    conda-forge
async-timeout             4.0.2              pyhd8ed1ab_0    conda-forge
async_generator           1.10                       py_0    conda-forge
atk-1.0                   2.36.0               h3371d22_4    conda-forge
attmap                    0.13.2             pyhd8ed1ab_0    conda-forge
attrs                     22.1.0             pyh71513ae_1    conda-forge
awscli                    1.25.85          py39hf3d152e_0    conda-forge
azure-common              1.1.28             pyhd8ed1ab_0    conda-forge
azure-core                1.25.1             pyhd8ed1ab_0    conda-forge
azure-storage-blob        12.13.1            pyhd8ed1ab_0    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
bcftools                  1.16                 hfe4b78e_0    bioconda
bcrypt                    3.2.2            py39hb9d737c_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
binaryornot               0.4.4                      py_1    conda-forge
binutils_impl_linux-64    2.36.1               h193b22a_2    conda-forge
binutils_linux-64         2.36                hf3e587d_10    conda-forge
bioconductor-annotationdbi 1.56.1            r41hdfd78af_0    bioconda
bioconductor-biobase      2.54.0            r41hc0cfd56_2    bioconda
bioconductor-biocfilecache 2.2.0             r41hdfd78af_0    bioconda
bioconductor-biocgenerics 0.40.0            r41hdfd78af_0    bioconda
bioconductor-biocio       1.4.0             r41hdfd78af_0    bioconda
bioconductor-biocparallel 1.28.3            r41hc247a5b_1    bioconda
bioconductor-biomart      2.50.0            r41hdfd78af_0    bioconda
bioconductor-biostrings   2.62.0            r41hc0cfd56_2    bioconda
bioconductor-bsgenome     1.62.0            r41hdfd78af_0    bioconda
bioconductor-delayedarray 0.20.0            r41hc0cfd56_2    bioconda
bioconductor-dnacopy      1.68.0            r41hefde4a7_2    bioconda
bioconductor-gdsfmt       1.30.0            r41hc247a5b_2    bioconda
bioconductor-genesis      2.24.2            r41hc0cfd56_0    bioconda
bioconductor-genomeinfodb 1.30.0            r41hdfd78af_0    bioconda
bioconductor-genomeinfodbdata 1.2.7             r41hdfd78af_2    bioconda
bioconductor-genomicalignments 1.30.0            r41hc0cfd56_2    bioconda
bioconductor-genomicfeatures 1.46.1            r41hdfd78af_0    bioconda
bioconductor-genomicranges 1.46.1            r41hc0cfd56_1    bioconda
bioconductor-gwastools    1.40.0            r41hdfd78af_0    bioconda
bioconductor-iranges      2.28.0            r41hc0cfd56_2    bioconda
bioconductor-keggrest     1.34.0            r41hdfd78af_0    bioconda
bioconductor-matrixgenerics 1.6.0             r41hdfd78af_0    bioconda
bioconductor-mungesumstats 1.2.0             r41hdfd78af_0    bioconda
bioconductor-quantsmooth  1.60.0            r41hdfd78af_0    bioconda
bioconductor-rhtslib      1.26.0            r41hc0cfd56_2    bioconda
bioconductor-rsamtools    2.10.0            r41hc247a5b_2    bioconda
bioconductor-rtracklayer  1.54.0            r41h171f361_4    bioconda
bioconductor-s4vectors    0.32.4            r41hc0cfd56_0    bioconda
bioconductor-seqarray     1.34.0            r41hc247a5b_2    bioconda
bioconductor-seqvartools  1.32.0            r41hdfd78af_0    bioconda
bioconductor-snprelate    1.28.0            r41hc247a5b_2    bioconda
bioconductor-summarizedexperiment 1.24.0            r41hdfd78af_0    bioconda
bioconductor-variantannotation 1.40.0            r41hc0cfd56_2    bioconda
bioconductor-xvector      0.34.0            r41hc0cfd56_2    bioconda
bioconductor-zlibbioc     1.40.0            r41hc0cfd56_2    bioconda
biopython                 1.79             py39hb9d737c_2    conda-forge
black                     22.8.0           py39hf3d152e_0    conda-forge
blas                      2.116                  openblas    conda-forge
blas-devel                3.9.0           16_linux64_openblas    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
blinker                   1.5                pyhd8ed1ab_0    conda-forge
blis                      0.9.0                h166bdaf_0    conda-forge
boto                      2.49.0                     py_0    conda-forge
boto3                     1.24.84            pyhd8ed1ab_0    conda-forge
botocore                  1.27.84            pyhd8ed1ab_0    conda-forge
bottleneck                1.3.5            py39hd257fcd_0    conda-forge
brotlipy                  0.7.0           py39hb9d737c_1004    conda-forge
bwidget                   1.9.14               ha770c72_1    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2022.9.24            ha878542_0    conda-forge
cachetools                5.2.0              pyhd8ed1ab_0    conda-forge
cairo                     1.16.0            ha12eb4b_1010    conda-forge
certifi                   2022.9.24          pyhd8ed1ab_0    conda-forge
cffi                      1.15.1           py39he91dace_0    conda-forge
chardet                   5.0.0            py39hf3d152e_0    conda-forge
charset-normalizer        2.1.1              pyhd8ed1ab_0    conda-forge
click                     8.1.3            py39hf3d152e_0    conda-forge
code-server               4.6.0                ha770c72_0    conda-forge
coin-or-cbc               2.10.8               h3786ebc_0    conda-forge
coin-or-cgl               0.60.6               h6f57e76_2    conda-forge
coin-or-clp               1.17.7               hc56784d_2    conda-forge
coin-or-osi               0.108.7              h2720bb7_2    conda-forge
coin-or-utils             2.11.6               h202d8b1_2    conda-forge
coincbc                   2.10.8            0_metapackage    conda-forge
colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
commonmark                0.9.1                      py_0    conda-forge
conda                     22.9.0           py39hf3d152e_1    conda-forge
conda-build               3.22.0           py39hf3d152e_2    conda-forge
conda-package-handling    1.9.0            py39hb9d737c_0    conda-forge
configargparse            1.5.3              pyhd8ed1ab_0    conda-forge
connection_pool           0.0.3              pyhd3deb0d_0    conda-forge
cookiecutter              2.1.1              pyh6c4a22f_0    conda-forge
cryptography              36.0.2           py39hd97740a_1    conda-forge
curl                      7.85.0               h7bff187_0    conda-forge
dataclasses               0.8                pyhc8e2a94_3    conda-forge
datrie                    0.8.2            py39h3811e60_3    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.6.3            py39h5a03fae_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
dill                      0.3.5.1            pyhd8ed1ab_0    conda-forge
docutils                  0.16             py39hf3d152e_3    conda-forge
dpath                     2.0.6            py39hf3d152e_1    conda-forge
drmaa                     0.7.9                   py_1000    conda-forge
dropbox                   11.34.0            pyhd8ed1ab_0    conda-forge
eli5                      0.13.0             pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
et_xmlfile                1.0.1                   py_1001    conda-forge
exa                       0.10.1               habb4d0f_0    conda-forge
executing                 1.1.0              pyhd8ed1ab_0    conda-forge
expat                     2.4.9                h27087fc_0    conda-forge
fftw                      3.3.10          nompi_hf0379b8_105    conda-forge
filechunkio               1.8                        py_2    conda-forge
filelock                  3.8.0              pyhd8ed1ab_0    conda-forge
flippyr                   0.5.3              pyh5e36f6f_0    bioconda
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.0               hc2a2eb6_1    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
freetype                  2.12.1               hca18f0e_0    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
frozenlist                1.3.1            py39hb9d737c_0    conda-forge
ftputil                   5.0.4              pyhd8ed1ab_0    conda-forge
future                    0.18.2           py39hf3d152e_5    conda-forge
g-ir-build-tools          1.74.0           py39h3707be2_0    conda-forge
g-ir-host-tools           1.74.0               h1def2ed_0    conda-forge
gcc                       10.4.0              hb92f740_10    conda-forge
gcc_impl_linux-64         10.4.0              h7ee1905_16    conda-forge
gcc_linux-64              10.4.0              h9215b83_10    conda-forge
gdk-pixbuf                2.42.8               hff1cb4f_1    conda-forge
gettext                   0.19.8.1          h27087fc_1009    conda-forge
gfortran_impl_linux-64    10.4.0              h44b2e72_16    conda-forge
gfortran_linux-64         10.4.0              h69d5af5_10    conda-forge
gh                        2.16.1               ha8f183a_0    conda-forge
ghostscript               9.54.0               h27087fc_2    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
git                       2.38.0          pl5321h5fbbf19_0    conda-forge
gitdb                     4.0.9              pyhd8ed1ab_0    conda-forge
gitpython                 3.1.27             pyhd8ed1ab_0    conda-forge
glib                      2.74.0               h6239696_0    conda-forge
glib-tools                2.74.0               h6239696_0    conda-forge
glob2                     0.7                        py_0    conda-forge
globus-cli                3.8.0              pyhd8ed1ab_0    conda-forge
globus-sdk                3.11.0             pyhd8ed1ab_0    conda-forge
gmp                       6.2.1                h58526e2_0    conda-forge
go                        1.18.5               h5acc617_1    conda-forge
gobject-introspection     1.74.0           py39h4e09a1e_0    conda-forge
google-api-core           2.10.1             pyhd8ed1ab_0    conda-forge
google-api-python-client  2.63.0             pyhd8ed1ab_0    conda-forge
google-auth               2.12.0             pyh1a96a4e_0    conda-forge
google-auth-httplib2      0.1.0              pyhd8ed1ab_1    conda-forge
google-cloud-core         2.3.2              pyhd8ed1ab_0    conda-forge
google-cloud-storage      2.5.0              pyh6c4a22f_0    conda-forge
google-crc32c             1.1.2            py39h8db88ab_3    conda-forge
google-resumable-media    2.4.0              pyhd8ed1ab_0    conda-forge
googleapis-common-protos  1.56.4           py39hf3d152e_0    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  3.0.0                h5abf519_1    conda-forge
grpc-cpp                  1.48.1               h05bd8bd_1    conda-forge
grpcio                    1.48.1           py39h712372c_1    conda-forge
gsl                       2.7                  he838d99_0    conda-forge
gst-plugins-base          1.20.3               h57caac4_2    conda-forge
gstreamer                 1.20.3               hd4edc92_2    conda-forge
gtk2                      2.24.33              h90689f9_2    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
gxx_impl_linux-64         10.4.0              h7ee1905_16    conda-forge
gxx_linux-64              10.4.0              h6e491c6_10    conda-forge
harfbuzz                  4.2.0                h40b6f09_0    conda-forge
htop                      3.2.1                h0f457ee_0    conda-forge
htslib                    1.16                 h6bc39ce_0    bioconda
httplib2                  0.20.4             pyhd8ed1ab_0    conda-forge
hub                       2.14.2               h35146e1_2    conda-forge
icu                       69.1                 h9c3ff4c_0    conda-forge
idna                      3.4                pyhd8ed1ab_0    conda-forge
imagemagick               7.1.0_29        pl5321heb7c40d_0    conda-forge
importlib-metadata        4.11.4           py39hf3d152e_0    conda-forge
importlib_metadata        4.11.4               hd8ed1ab_0    conda-forge
importlib_resources       5.9.0              pyhd8ed1ab_0    conda-forge
iniconfig                 1.1.1              pyh9f0ad1d_0    conda-forge
ipdb                      0.13.9             pyhd8ed1ab_0    conda-forge
ipykernel                 6.16.0             pyh210e3f2_0    conda-forge
ipython                   8.5.0              pyh41d4057_1    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                8.0.2              pyhd8ed1ab_1    conda-forge
isodate                   0.6.1              pyhd8ed1ab_0    conda-forge
jbig                      2.1               h7f98852_2003    conda-forge
jdcal                     1.4.1                      py_0    conda-forge
jedi                      0.18.1             pyhd8ed1ab_2    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jinja2-time               0.2.0              pyhd8ed1ab_3    conda-forge
jmespath                  0.10.0             pyh9f0ad1d_0    conda-forge
joblib                    1.2.0              pyhd8ed1ab_0    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.16.0             pyhd8ed1ab_0    conda-forge
julia                     1.8.1                h6f5dd7c_0    conda-forge
jupyter                   1.0.0            py39hf3d152e_7    conda-forge
jupyter_client            7.3.5              pyhd8ed1ab_0    conda-forge
jupyter_console           6.4.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1           py39hf3d152e_0    conda-forge
jupyter_server            1.19.1             pyhd8ed1ab_0    conda-forge
jupyterlab                3.4.7              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.15.2             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.3              pyhd8ed1ab_0    conda-forge
kernel-headers_linux-64   3.10.0              h4a8ded7_13    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
lbzip2                    2.5                           0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libabseil                 20220623.0      cxx17_h48a1fff_4    conda-forge
libarchive                3.5.2                hccf745f_1    conda-forge
libblas                   3.9.0           16_linux64_openblas    conda-forge
libcblas                  3.9.0           16_linux64_openblas    conda-forge
libclang                  13.0.1          default_hc23dcda_0    conda-forge
libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
libcurl                   7.85.0               h7bff187_0    conda-forge
libdeflate                1.13                 h166bdaf_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-devel_linux-64     10.4.0              h74af60c_16    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgd                     2.3.3                h283352f_2    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libgirepository           1.74.0               ha2a38d2_0    conda-forge
libgit2                   1.5.0                h6529ace_0    conda-forge
libglib                   2.74.0               h7a41b64_0    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.17                 h166bdaf_0    conda-forge
liblapack                 3.9.0           16_linux64_openblas    conda-forge
liblapacke                3.9.0           16_linux64_openblas    conda-forge
liblief                   0.12.2               h27087fc_0    conda-forge
libllvm11                 11.1.0               he0ac6c6_4    conda-forge
libllvm13                 13.0.1               hf817b99_2    conda-forge
libmamba                  0.26.0               h0dd8ff0_0    conda-forge
libmambapy                0.26.0           py39hd55135b_0    conda-forge
libnghttp2                1.47.0               hdcd2b5c_1    conda-forge
libnl                     3.7.0                h166bdaf_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.21          pthreads_h78a6416_3    conda-forge
libopenblas-ilp64         0.3.21          pthreads_h44c56fb_3    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.38               h753d276_0    conda-forge
libpq                     14.5                 hd77ab85_0    conda-forge
libprotobuf               3.21.7               h6239696_0    conda-forge
librsvg                   2.52.5               h0a9e6e8_3    conda-forge
libsanitizer              10.4.0              hde28e3b_16    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libsolv                   0.7.22               h6239696_0    conda-forge
libsqlite                 3.39.4               h753d276_0    conda-forge
libssh2                   1.10.0               haa6b8db_3    conda-forge
libstdcxx-devel_linux-64  10.4.0              h74af60c_16    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libtiff                   4.4.0                h0e0dad5_3    conda-forge
libtool                   2.4.6             h9c3ff4c_1008    conda-forge
libunwind                 1.6.2                h9c3ff4c_0    conda-forge
libutf8proc               2.7.0                h7f98852_0    conda-forge
libuuid                   2.32.1            h14c3975_1000    conda-forge
libuv                     1.43.0               h7f98852_0    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.4                h522a892_0    conda-forge
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.12               h885dcf4_1    conda-forge
libxslt                   1.1.33               h0ef7038_3    conda-forge
libzlib                   1.2.12               h166bdaf_4    conda-forge
lineedit                  0.1.6                    pypi_0    pypi
llvm-openmp               14.0.4               he0ac6c6_0    conda-forge
logmuse                   0.2.6              pyh8c360ce_0    conda-forge
lxml                      4.8.0            py39hb9d737c_2    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
lzo                       2.10              h516909a_1000    conda-forge
make                      4.3                  hd18ef5c_1    conda-forge
markupsafe                2.1.1            py39hb9d737c_1    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mbedtls                   3.2.1                h27087fc_0    conda-forge
metis                     5.1.0             h58526e2_1006    conda-forge
miller                    6.4.0                ha770c72_0    conda-forge
mistune                   2.0.4              pyhd8ed1ab_0    conda-forge
more-itertools            8.14.0             pyhd8ed1ab_0    conda-forge
mpfr                      4.1.0                h9202a9a_1    conda-forge
msrest                    0.7.1              pyhd8ed1ab_0    conda-forge
multidict                 6.0.2            py39hb9d737c_1    conda-forge
mypy_extensions           0.4.3            py39hf3d152e_5    conda-forge
mysql-common              8.0.30               haf5c9bc_1    conda-forge
mysql-libs                8.0.30               h28c427c_1    conda-forge
nbclassic                 0.4.4              pyhd8ed1ab_0    conda-forge
nbclient                  0.6.8              pyhd8ed1ab_0    conda-forge
nbconvert                 7.1.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.1.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.1.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.6.1              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
networkx                  2.8.7              pyhd8ed1ab_0    conda-forge
ninja                     1.11.0               h924138e_0    conda-forge
nlopt                     2.7.1            py39h04df310_1    conda-forge
nodejs                    16.14.2              h784f1fd_0    conda-forge
nomkl                     1.0                  h5ca1d4c_0    conda-forge
notebook                  6.4.12             pyha770c72_0    conda-forge
notebook-shim             0.1.0              pyhd8ed1ab_0    conda-forge
nspr                      4.32                 h9c3ff4c_1    conda-forge
nss                       3.78                 h2350873_0    conda-forge
numexpr                   2.8.3           py39h194a79d_100    conda-forge
numpy                     1.23.3           py39hba7629e_0    conda-forge
oauth2client              4.1.3                      py_0    conda-forge
oauthlib                  3.2.1              pyhd8ed1ab_0    conda-forge
openblas                  0.3.21          pthreads_h320a7e8_3    conda-forge
openblas-ilp64            0.3.21          pthreads_h3d04fff_3    conda-forge
openjdk                   11.0.1            h516909a_1016    conda-forge
openjpeg                  2.4.0                hb52868f_1    conda-forge
openlibm                  0.8.1                h7f98852_0    conda-forge
openpyxl                  3.0.10           py39hb9d737c_1    conda-forge
openssl                   1.1.1q               h166bdaf_0    conda-forge
p7zip                     16.02             h9c3ff4c_1001    conda-forge
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandas                    1.5.0            py39h4661b88_0    conda-forge
pandoc                    2.19.2               ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.50.7               hbd2fdc8_0    conda-forge
paramiko                  2.11.0             pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
patch                     2.7.6             h7f98852_1002    conda-forge
patchelf                  0.15.0               h58526e2_0    conda-forge
pathspec                  0.10.1             pyhd8ed1ab_0    conda-forge
patsy                     0.5.2              pyhd8ed1ab_0    conda-forge
pbzip2                    1.1.13                        0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pcre2                     10.37                hc3806b6_1    conda-forge
peppy                     0.35.2             pyhd8ed1ab_0    conda-forge
perl                      5.32.1          2_h7f98852_perl5    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pigz                      2.6                  h27826a3_0    conda-forge
pip                       22.2.2             pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               h36c2ea0_0    conda-forge
pkg-config                0.29.2            h36c2ea0_1008    conda-forge
pkginfo                   1.8.3              pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
plac                      1.3.5              pyhd8ed1ab_0    conda-forge
platformdirs              2.5.2              pyhd8ed1ab_1    conda-forge
plink                     1.90b6.21            hec16e2b_2    bioconda
pluggy                    1.0.0            py39hf3d152e_3    conda-forge
ply                       3.11                       py_1    conda-forge
powerline-status          2.7             py39hb9d737c_1005    conda-forge
poyo                      0.5.0                      py_0    conda-forge
prettytable               3.4.1              pyhd8ed1ab_0    conda-forge
prometheus_client         0.14.1             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.31             pyha770c72_0    conda-forge
prompt_toolkit            3.0.31               hd8ed1ab_0    conda-forge
protobuf                  4.21.7           py39h5a03fae_0    conda-forge
psutil                    5.9.2            py39hb9d737c_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pudb                      2022.1             pyhd8ed1ab_1    conda-forge
pulp                      2.6.0            py39hf3d152e_1    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py                        1.11.0             pyh6c4a22f_0    conda-forge
py-lief                   0.12.2           py39h5a03fae_0    conda-forge
pyasn1                    0.4.8                      py_0    conda-forge
pyasn1-modules            0.2.7                      py_0    conda-forge
pybind11-abi              4                    hd8ed1ab_3    conda-forge
pycosat                   0.6.3           py39hb9d737c_1010    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pyfaidx                   0.7.1              pyh5e36f6f_0    bioconda
pygments                  2.13.0             pyhd8ed1ab_0    conda-forge
pygraphviz                1.9              py39hcd39427_2    conda-forge
pyjwt                     2.5.0              pyhd8ed1ab_0    conda-forge
pynacl                    1.5.0            py39hb9d737c_1    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_1    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyqt                      5.12.3           py39hf3d152e_7    conda-forge
pyqt-impl                 5.12.3           py39h0fcd23e_7    conda-forge
pyqt5-sip                 4.19.18          py39he80948d_7    conda-forge
pyqtchart                 5.12             py39h0fcd23e_7    conda-forge
pyqtwebengine             5.12.1           py39h0fcd23e_7    conda-forge
pyrsistent                0.18.1           py39hb9d737c_1    conda-forge
pysam                     0.19.1           py39h9abd093_1    bioconda
pysftp                    0.2.9                      py_1    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pytest                    7.1.3            py39hf3d152e_0    conda-forge
python                    3.9.13          h9a8a25e_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.2             pyhd8ed1ab_0    conda-forge
python-graphviz           0.20.1             pyh22cad53_0    conda-forge
python-irodsclient        1.1.5              pyhd8ed1ab_0    conda-forge
python-libarchive-c       4.0              py39hf3d152e_1    conda-forge
python-slugify            6.1.2              pyhd8ed1ab_0    conda-forge
python_abi                3.9                      2_cp39    conda-forge
pytz                      2022.4             pyhd8ed1ab_0    conda-forge
pyu2f                     0.1.5              pyhd8ed1ab_0    conda-forge
pyvcf3                    1.0.3              pyhdfd78af_0    bioconda
pyyaml                    5.4.1            py39hb9d737c_3    conda-forge
pyzmq                     24.0.1           py39headdf64_0    conda-forge
qt                        5.12.9               h1304e3e_6    conda-forge
qtconsole                 5.3.2              pyhd8ed1ab_0    conda-forge
qtconsole-base            5.3.2              pyha770c72_0    conda-forge
qtpy                      2.2.1              pyhd8ed1ab_0    conda-forge
r-askpass                 1.1               r41hcfec24a_2    conda-forge
r-assertthat              0.2.1             r41hc72bb7e_2    conda-forge
r-backports               1.4.1             r41hcfec24a_0    conda-forge
r-base                    4.1.3                hd930d0e_0    conda-forge
r-base64enc               0.1_3           r41hcfec24a_1004    conda-forge
r-bh                      1.78.0_0          r41hc72bb7e_0    conda-forge
r-bib2df                  1.1.1             r41hc72bb7e_0    conda-forge
r-bit                     4.0.4             r41hcfec24a_0    conda-forge
r-bit64                   4.0.5             r41hcfec24a_0    conda-forge
r-bitops                  1.0_7             r41h06615bd_0    conda-forge
r-blob                    1.2.3             r41hc72bb7e_0    conda-forge
r-boot                    1.3_28            r41hc72bb7e_0    conda-forge
r-brew                    1.0_8             r41hc72bb7e_0    conda-forge
r-brio                    1.1.3             r41hcfec24a_0    conda-forge
r-broom                   1.0.1             r41hc72bb7e_0    conda-forge
r-bslib                   0.4.0             r41hc72bb7e_0    conda-forge
r-cachem                  1.0.6             r41hcfec24a_0    conda-forge
r-callr                   3.7.2             r41hc72bb7e_0    conda-forge
r-caret                   6.0_93            r41h06615bd_0    conda-forge
r-cellranger              1.1.0           r41hc72bb7e_1004    conda-forge
r-checkmate               2.1.0             r41h06615bd_0    conda-forge
r-class                   7.3_20            r41hcfec24a_0    conda-forge
r-cli                     3.4.1             r41h7525677_0    conda-forge
r-clipr                   0.8.0             r41hc72bb7e_0    conda-forge
r-cluster                 2.1.3             r41h8da6f51_0    conda-forge
r-codetools               0.2_18            r41hc72bb7e_0    conda-forge
r-collections             0.3.5             r41hcfec24a_0    conda-forge
r-colorspace              2.0_3             r41h06615bd_0    conda-forge
r-commonmark              1.8.0             r41h06615bd_0    conda-forge
r-conquer                 1.3.0             r41hcec875b_0    conda-forge
r-cpp11                   0.4.2             r41hc72bb7e_0    conda-forge
r-crayon                  1.5.2             r41hc72bb7e_0    conda-forge
r-crosstalk               1.2.0             r41hc72bb7e_0    conda-forge
r-crul                    1.3               r41h785f33e_0    conda-forge
r-curl                    4.3.2             r41hcfec24a_0    conda-forge
r-cyclocomp               1.1.0           r41hc72bb7e_1004    conda-forge
r-data.table              1.14.2            r41hcfec24a_0    conda-forge
r-dbi                     1.1.3             r41hc72bb7e_0    conda-forge
r-dbplyr                  2.2.1             r41hc72bb7e_0    conda-forge
r-desc                    1.4.2             r41hc72bb7e_0    conda-forge
r-diffobj                 0.3.5             r41hcfec24a_0    conda-forge
r-digest                  0.6.29            r41h03ef668_0    conda-forge
r-doparallel              1.0.17            r41hc72bb7e_0    conda-forge
r-dplyr                   1.0.10            r41h7525677_0    conda-forge
r-dt                      0.25              r41hc72bb7e_0    conda-forge
r-dtplyr                  1.2.2             r41hc72bb7e_0    conda-forge
r-e1071                   1.7_11            r41h7525677_0    conda-forge
r-ellipsis                0.3.2             r41hcfec24a_0    conda-forge
r-essentials              4.1             r41hd8ed1ab_2002    conda-forge
r-evaluate                0.16              r41hc72bb7e_0    conda-forge
r-fansi                   1.0.3             r41h06615bd_0    conda-forge
r-farver                  2.1.1             r41h7525677_0    conda-forge
r-fastmap                 1.1.0             r41h03ef668_0    conda-forge
r-filelock                1.0.2           r41hcfec24a_1002    conda-forge
r-fontawesome             0.3.0             r41hc72bb7e_0    conda-forge
r-forcats                 0.5.2             r41hc72bb7e_0    conda-forge
r-foreach                 1.5.2             r41hc72bb7e_0    conda-forge
r-foreign                 0.8_83            r41h06615bd_0    conda-forge
r-formatr                 1.12              r41hc72bb7e_0    conda-forge
r-formula.tools           1.7.1           r41hc72bb7e_1003    conda-forge
r-fs                      1.5.2             r41h7525677_1    conda-forge
r-furrr                   0.3.1             r41hc72bb7e_0    conda-forge
r-futile.logger           1.4.3           r41hc72bb7e_1003    conda-forge
r-futile.options          1.0.1           r41hc72bb7e_1002    conda-forge
r-future                  1.28.0            r41hc72bb7e_0    conda-forge
r-future.apply            1.9.1             r41hc72bb7e_0    conda-forge
r-gargle                  1.2.1             r41hc72bb7e_0    conda-forge
r-gdata                   2.18.0.1          r41hc72bb7e_0    conda-forge
r-gdtools                 0.2.4             r41h42e24d8_0    conda-forge
r-generics                0.1.3             r41hc72bb7e_0    conda-forge
r-ggplot2                 3.3.6             r41hc72bb7e_0    conda-forge
r-ggrepel                 0.9.1             r41h03ef668_0    conda-forge
r-gistr                   0.9.0             r41hc72bb7e_0    conda-forge
r-glmnet                  4.1_2             r41h859d828_0    conda-forge
r-globals                 0.16.1            r41hc72bb7e_0    conda-forge
r-glue                    1.6.2             r41h06615bd_0    conda-forge
r-googleauthr             2.0.0             r41hc72bb7e_0    conda-forge
r-googledrive             2.0.0             r41hc72bb7e_0    conda-forge
r-googlesheets4           1.0.1             r41h785f33e_0    conda-forge
r-gower                   1.0.0             r41hcfec24a_0    conda-forge
r-gtable                  0.3.1             r41hc72bb7e_0    conda-forge
r-gtools                  3.9.3             r41h06615bd_0    conda-forge
r-gwasexacthw             1.01              r41hcfec24a_1    conda-forge
r-hardhat                 1.2.0             r41hc72bb7e_0    conda-forge
r-haven                   2.5.0             r41h7525677_0    conda-forge
r-hexbin                  1.28.2            r41h8da6f51_0    conda-forge
r-highr                   0.9               r41hc72bb7e_0    conda-forge
r-hms                     1.1.2             r41hc72bb7e_0    conda-forge
r-htmltools               0.5.3             r41h7525677_0    conda-forge
r-htmlwidgets             1.5.4             r41hc72bb7e_0    conda-forge
r-httpcode                0.3.0             r41ha770c72_1    conda-forge
r-httpuv                  1.6.6             r41h7525677_0    conda-forge
r-httr                    1.4.4             r41hc72bb7e_0    conda-forge
r-humaniformat            0.6.0             r41h7525677_0    conda-forge
r-ids                     1.0.1             r41hc72bb7e_1    conda-forge
r-igraph                  1.3.0             r41hf10d5bd_0    conda-forge
r-ipred                   0.9_13            r41h06615bd_0    conda-forge
r-irdisplay               1.1               r41hd8ed1ab_0    conda-forge
r-irkernel                1.3               r41hc72bb7e_0    conda-forge
r-isoband                 0.2.5             r41h03ef668_0    conda-forge
r-iterators               1.0.14            r41hc72bb7e_0    conda-forge
r-jomo                    2.7_4             r41h06615bd_0    conda-forge
r-jquerylib               0.1.4             r41hc72bb7e_0    conda-forge
r-jsonlite                1.8.2             r41h06615bd_0    conda-forge
r-kableextra              1.3.4             r41hc72bb7e_0    conda-forge
r-kernsmooth              2.23_20           r41h742201e_0    conda-forge
r-knitr                   1.40              r41hc72bb7e_0    conda-forge
r-labeling                0.4.2             r41hc72bb7e_1    conda-forge
r-lambda.r                1.2.4             r41hc72bb7e_1    conda-forge
r-languageserver          0.3.13            r41h06615bd_0    conda-forge
r-later                   1.2.0             r41h03ef668_0    conda-forge
r-latex2exp               0.9.5             r41hc72bb7e_0    conda-forge
r-lattice                 0.20_45           r41hcfec24a_0    conda-forge
r-lava                    1.6.10            r41hc72bb7e_0    conda-forge
r-lazyeval                0.2.2             r41hcfec24a_2    conda-forge
r-learnr                  0.10.1            r41hc72bb7e_1    conda-forge
r-lifecycle               1.0.2             r41hc72bb7e_0    conda-forge
r-lintr                   3.0.1             r41hc72bb7e_0    conda-forge
r-listenv                 0.8.0             r41hc72bb7e_1    conda-forge
r-lme4                    1.1_30            r41h7525677_0    conda-forge
r-lmtest                  0.9_40            r41h8da6f51_0    conda-forge
r-lobstr                  1.1.2             r41h7525677_0    conda-forge
r-logistf                 1.24.1            r41hcfec24a_0    conda-forge
r-lubridate               1.8.0             r41h03ef668_0    conda-forge
r-magrittr                2.0.3             r41h06615bd_0    conda-forge
r-maps                    3.4.0             r41hcfec24a_0    conda-forge
r-markdown                1.1               r41hcfec24a_1    conda-forge
r-mass                    7.3_58.1          r41h06615bd_0    conda-forge
r-matrix                  1.4_1             r41h0154571_0    conda-forge
r-matrixmodels            0.5_0             r41hc72bb7e_0    conda-forge
r-matrixstats             0.62.0            r41h06615bd_0    conda-forge
r-memoise                 2.0.1             r41hc72bb7e_0    conda-forge
r-mgcv                    1.8_40            r41h0154571_0    conda-forge
r-mice                    3.14.0            r41h03ef668_0    conda-forge
r-mime                    0.12              r41hcfec24a_0    conda-forge
r-miniui                  0.1.1.1         r41hc72bb7e_1002    conda-forge
r-minqa                   1.2.4           r41h5ee154c_1006    conda-forge
r-mitml                   0.4_3             r41hc72bb7e_0    conda-forge
r-modelmetrics            1.2.2.2           r41h03ef668_1    conda-forge
r-modelr                  0.1.9             r41hc72bb7e_0    conda-forge
r-munsell                 0.5.0           r41hc72bb7e_1004    conda-forge
r-nlme                    3.1_159           r41h8da6f51_0    conda-forge
r-nloptr                  2.0.3             r41hb13c81a_0    conda-forge
r-nnet                    7.3_18            r41h06615bd_0    conda-forge
r-numderiv                2016.8_1.1        r41hc72bb7e_3    conda-forge
r-openssl                 2.0.3             r41hfaab4ff_0    conda-forge
r-operator.tools          1.6.3           r41hc72bb7e_1003    conda-forge
r-ordinal                 2019.12_10        r41hcfec24a_1    conda-forge
r-pan                     1.6               r41h859d828_4    conda-forge
r-parallelly              1.32.1            r41hc72bb7e_0    conda-forge
r-pbdzmq                  0.3_7             r41h42bf92c_0    conda-forge
r-pillar                  1.8.1             r41hc72bb7e_0    conda-forge
r-pkgconfig               2.0.3             r41hc72bb7e_1    conda-forge
r-pkgload                 1.3.0             r41hc72bb7e_0    conda-forge
r-plogr                   0.2.0           r41hc72bb7e_1003    conda-forge
r-plyr                    1.8.7             r41h7525677_0    conda-forge
r-png                     0.1_7           r41hcfec24a_1004    conda-forge
r-praise                  1.0.0           r41hc72bb7e_1005    conda-forge
r-prettyunits             1.1.1             r41hc72bb7e_1    conda-forge
r-proc                    1.18.0            r41h03ef668_0    conda-forge
r-processx                3.7.0             r41h06615bd_0    conda-forge
r-prodlim                 2019.11.13        r41h03ef668_1    conda-forge
r-progress                1.2.2             r41hc72bb7e_2    conda-forge
r-progressr               0.11.0            r41hc72bb7e_0    conda-forge
r-promises                1.2.0.1           r41h03ef668_0    conda-forge
r-proxy                   0.4_27            r41h06615bd_0    conda-forge
r-pryr                    0.1.5             r41h03ef668_0    conda-forge
r-ps                      1.7.1             r41h06615bd_0    conda-forge
r-purrr                   0.3.4             r41hcfec24a_1    conda-forge
r-quantmod                0.4.20            r41hc72bb7e_0    conda-forge
r-quantreg                5.94              r41hb361e29_0    conda-forge
r-r.cache                 0.16.0            r41hc72bb7e_0    conda-forge
r-r.methodss3             1.8.2             r41hc72bb7e_0    conda-forge
r-r.oo                    1.25.0            r41hc72bb7e_0    conda-forge
r-r.utils                 2.12.0            r41hc72bb7e_0    conda-forge
r-r6                      2.5.1             r41hc72bb7e_0    conda-forge
r-randomforest            4.7_1.1           r41h8da6f51_0    conda-forge
r-rappdirs                0.3.3             r41hcfec24a_0    conda-forge
r-rbokeh                  0.5.2             r41hc72bb7e_1    conda-forge
r-rcolorbrewer            1.1_3             r41h785f33e_0    conda-forge
r-rcpp                    1.0.9             r41h7525677_1    conda-forge
r-rcpparmadillo           0.11.2.3.1        r41h9f5de39_0    conda-forge
r-rcppeigen               0.3.3.9.2         r41h43535f1_0    conda-forge
r-rcrossref               1.1.0             r41hc72bb7e_0    conda-forge
r-rcurl                   1.98_1.9          r41h06615bd_0    conda-forge
r-readr                   2.1.3             r41h7525677_0    conda-forge
r-readxl                  1.4.1             r41hf23e330_0    conda-forge
r-recipes                 1.0.1             r41hc72bb7e_0    conda-forge
r-recommended             4.1             r41hd8ed1ab_1004    conda-forge
r-rematch                 1.0.1           r41hc72bb7e_1004    conda-forge
r-rematch2                2.1.2             r41hc72bb7e_1    conda-forge
r-remotes                 2.4.2             r41hc72bb7e_0    conda-forge
r-renv                    0.16.0            r41hc72bb7e_0    conda-forge
r-repr                    1.1.4             r41h785f33e_0    conda-forge
r-reprex                  2.0.2             r41hc72bb7e_0    conda-forge
r-reshape2                1.4.4             r41h03ef668_1    conda-forge
r-restfulr                0.0.15            r41h73dbb54_0    bioconda
r-rex                     1.2.1             r41hc72bb7e_0    conda-forge
r-rjson                   0.2.21            r41h7525677_1    conda-forge
r-rlang                   1.0.6             r41h7525677_0    conda-forge
r-rmarkdown               2.16              r41hc72bb7e_0    conda-forge
r-roxygen2                7.2.1             r41h7525677_0    conda-forge
r-rpart                   4.1.16            r41hcfec24a_0    conda-forge
r-rprojroot               2.0.3             r41hc72bb7e_0    conda-forge
r-rsqlite                 2.2.8             r41h03ef668_0    conda-forge
r-rstudioapi              0.14              r41hc72bb7e_0    conda-forge
r-rvest                   1.0.3             r41hc72bb7e_0    conda-forge
r-sandwich                3.0_2             r41hc72bb7e_0    conda-forge
r-sass                    0.4.2             r41h7525677_0    conda-forge
r-scales                  1.2.1             r41hc72bb7e_0    conda-forge
r-selectr                 0.4_2             r41hc72bb7e_1    conda-forge
r-shape                   1.4.6             r41ha770c72_0    conda-forge
r-shiny                   1.7.2             r41h785f33e_0    conda-forge
r-snow                    0.4_4             r41hc72bb7e_0    conda-forge
r-sourcetools             0.1.7           r41h03ef668_1002    conda-forge
r-sparsem                 1.81              r41h859d828_0    conda-forge
r-spatial                 7.3_15            r41hcfec24a_0    conda-forge
r-squarem                 2021.1            r41hc72bb7e_0    conda-forge
r-statmod                 1.4.37            r41hc3ea6d6_0    conda-forge
r-stringdist              0.9.8             r41hcfec24a_1    conda-forge
r-stringi                 1.7.6             r41h337692f_1    conda-forge
r-stringr                 1.4.1             r41hc72bb7e_0    conda-forge
r-styler                  1.7.0             r41hc72bb7e_0    conda-forge
r-survival                3.4_0             r41h06615bd_0    conda-forge
r-svglite                 2.1.0             r41h03ef668_0    conda-forge
r-sys                     3.4               r41hcfec24a_0    conda-forge
r-systemfonts             1.0.4             r41hef9c87a_0    conda-forge
r-testthat                3.1.4             r41h7525677_0    conda-forge
r-tibble                  3.1.8             r41h06615bd_0    conda-forge
r-tidyr                   1.2.1             r41h7525677_0    conda-forge
r-tidyselect              1.1.2             r41hc72bb7e_0    conda-forge
r-tidyverse               1.3.2             r41hc72bb7e_0    conda-forge
r-timedate                4021.106          r41hc72bb7e_0    conda-forge
r-tinytex                 0.42              r41hc72bb7e_0    conda-forge
r-triebeard               0.3.0           r41h7525677_1004    conda-forge
r-ttr                     0.24.3            r41h06615bd_0    conda-forge
r-tzdb                    0.3.0             r41h7525677_0    conda-forge
r-ucminf                  1.1_4.1           r41h8da6f51_0    conda-forge
r-urltools                1.7.3             r41h03ef668_2    conda-forge
r-utf8                    1.2.2             r41hcfec24a_0    conda-forge
r-uuid                    1.1_0             r41h06615bd_0    conda-forge
r-vctrs                   0.4.2             r41h7525677_0    conda-forge
r-viridislite             0.4.1             r41hc72bb7e_0    conda-forge
r-vroom                   1.6.0             r41h7525677_0    conda-forge
r-waldo                   0.4.0             r41hc72bb7e_0    conda-forge
r-webshot                 0.5.4             r41hc72bb7e_0    conda-forge
r-withr                   2.5.0             r41hc72bb7e_0    conda-forge
r-xfun                    0.33              r41h7525677_0    conda-forge
r-xml                     3.99_0.9          r41h06615bd_0    conda-forge
r-xml2                    1.3.3             r41h03ef668_0    conda-forge
r-xmlparsedata            1.0.5             r41hc72bb7e_0    conda-forge
r-xtable                  1.8_4             r41hc72bb7e_3    conda-forge
r-xts                     0.12.1            r41h06615bd_0    conda-forge
r-yaml                    2.3.5             r41h06615bd_0    conda-forge
r-zoo                     1.8_11            r41h06615bd_0    conda-forge
radian                    0.5.10                   pypi_0    pypi
ratelimiter               1.2.0                   py_1002    conda-forge
rchitect                  0.3.30                   pypi_0    pypi
rclone                    1.59.2               h519d9b9_0    conda-forge
re2                       2022.06.01           h27087fc_0    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
regex                     2022.9.13        py39hb9d737c_0    conda-forge
reproc                    14.2.3               h7f98852_0    conda-forge
reproc-cpp                14.2.3               h9c3ff4c_0    conda-forge
requests                  2.28.1             pyhd8ed1ab_1    conda-forge
requests-oauthlib         1.3.1              pyhd8ed1ab_0    conda-forge
requests-unixsocket       0.2.0                      py_0    conda-forge
retry                     0.9.2                      py_0    conda-forge
rich                      12.6.0             pyhd8ed1ab_0    conda-forge
ripgrep                   13.0.0               h2f28480_2    conda-forge
rsa                       4.7.2              pyh44b312d_0    conda-forge
ruamel.yaml               0.17.21          py39hb9d737c_1    conda-forge
ruamel.yaml.clib          0.2.6            py39hb9d737c_1    conda-forge
ruamel_yaml               0.15.80         py39hb9d737c_1007    conda-forge
s3transfer                0.6.0              pyhd8ed1ab_0    conda-forge
samtools                  1.16.1               h6899075_0    bioconda
scikit-learn              1.1.2            py39he5e8d7e_0    conda-forge
scipy                     1.9.1            py39h8ba3f38_0    conda-forge
sed                       4.8                  he412f7d_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                65.4.1             pyhd8ed1ab_0    conda-forge
simplejson                3.17.6           py39hb9d737c_1    conda-forge
singledispatch            3.6.1              pyh44b312d_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
slacker                   0.14.0                     py_0    conda-forge
smart_open                6.2.0              pyha770c72_0    conda-forge
smmap                     3.0.5              pyh44b312d_0    conda-forge
snakemake                 7.14.2               hdfd78af_0    bioconda
snakemake-minimal         7.14.2             pyhdfd78af_0    bioconda
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
snpeff                    5.1                  hdfd78af_2    bioconda
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlite                    3.39.4               h4ff8645_0    conda-forge
squashfs-tools            4.4                  hd0129a2_3    conda-forge
stack_data                0.5.1              pyhd8ed1ab_0    conda-forge
statsmodels               0.13.2           py39hd257fcd_0    conda-forge
stone                     3.3.1              pyhd8ed1ab_0    conda-forge
stopit                    1.1.2                      py_0    conda-forge
suitesparse               5.10.1               h9e50725_1    conda-forge
sysroot_linux-64          2.17                h4a8ded7_13    conda-forge
tabulate                  0.8.10             pyhd8ed1ab_0    conda-forge
tar                       1.34                 ha1f6473_0    conda-forge
tbb                       2021.6.0             h924138e_0    conda-forge
terminado                 0.16.0             pyh41d4057_0    conda-forge
testpath                  0.6.0              pyhd8ed1ab_0    conda-forge
text-unidecode            1.3                        py_0    conda-forge
threadpoolctl             3.1.0              pyh8a188c0_0    conda-forge
tinycss2                  1.1.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
tktable                   2.10                 hb7b940f_3    conda-forge
tmux                      3.3                  h385fc29_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
toposort                  1.7                pyhd8ed1ab_0    conda-forge
tornado                   6.2              py39hb9d737c_0    conda-forge
tqdm                      4.64.1             pyhd8ed1ab_0    conda-forge
traitlets                 5.4.0              pyhd8ed1ab_0    conda-forge
typed-ast                 1.5.4            py39hb9d737c_0    conda-forge
typing-extensions         4.3.0                hd8ed1ab_0    conda-forge
typing_extensions         4.3.0              pyha770c72_0    conda-forge
tzdata                    2022d                h191b570_0    conda-forge
ubiquerg                  0.6.2              pyhd8ed1ab_0    conda-forge
unidecode                 1.3.6              pyhd8ed1ab_0    conda-forge
uritemplate               4.1.1              pyhd8ed1ab_0    conda-forge
urllib3                   1.26.11            pyhd8ed1ab_0    conda-forge
urwid                     2.1.2            py39hb9d737c_6    conda-forge
urwid_readline            0.13               pyhd8ed1ab_0    conda-forge
veracitools               0.1.3                      py_0    conda-forge
vim                       9.0.0335        py39pl5321h20e6244_0    conda-forge
visidata                  2.8                pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.4.1              pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
widgetsnbextension        4.0.3              pyhd8ed1ab_0    conda-forge
wrapt                     1.14.1           py39hb9d737c_0    conda-forge
xlrd                      2.0.1              pyhd8ed1ab_3    conda-forge
xmlrunner                 1.7.7                      py_0    conda-forge
xorg-kbproto              1.0.7             h14c3975_1002    conda-forge
xorg-libice               1.0.10               h516909a_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h14c3975_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxpm               3.5.13               h7f98852_0    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-libxt                1.2.1                h7f98852_2    conda-forge
xorg-renderproto          0.11.1            h14c3975_1002    conda-forge
xorg-xextproto            7.3.0             h14c3975_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
yaml-cpp                  0.7.0                h27087fc_2    conda-forge
yarl                      1.7.2            py39hb9d737c_2    conda-forge
yte                       1.5.1            py39hf3d152e_0    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zipp                      3.8.1              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_4    conda-forge
zstd                      1.5.2                h6239696_4    conda-forge

Environment info

active environment : py3.9
    active env location : /sc/arion/work/fultob01/conda/envs/py3.9
            shell level : 1
       user config file : /hpc/users/fultob01/.condarc
 populated config files : /hpc/users/fultob01/.condarc
          conda version : 4.10.3
    conda-build version : not installed
         python version : 3.9.5.final.0
       virtual packages : __linux=3.10.0=0
                          __glibc=2.17=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /sc/arion/work/fultob01/conda/miniconda3  (writable)
      conda av data dir : /sc/arion/work/fultob01/conda/miniconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/bioconda/linux-64
                          https://conda.anaconda.org/bioconda/noarch
                          https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /sc/arion/work/fultob01/conda/pkgs
       envs directories : /sc/arion/work/fultob01/conda/envs
                          /sc/arion/work/fultob01/conda/miniconda3/envs
                          /hpc/users/fultob01/.conda/envs
               platform : linux-64
             user-agent : conda/4.10.3 requests/2.25.1 CPython/3.9.5 Linux/3.10.0-957.10.1.el7.x86_64 centos/7.6.1810 glibc/2.17
                UID:GID : 21268:31387
             netrc file : None
           offline mode : False
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant