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setup.py
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from setuptools import setup, find_packages
with open("README.md", "r") as readme_file:
readme = readme_file.read()
with open("requirements.txt", "rt", encoding="utf-8") as fh:
requirements = [line.strip() for line in fh.readlines()]
setup(name="cram2fastq",
version='0.0.5',
author="zktuong",
author_email="[email protected]",
description="Download and convert cram-to-fastq from irods.",
long_description=readme,
long_description_content_type="text/markdown",
url="https://github.com/clatworthylab/cram2fastq/",
packages=find_packages(),
setup_requires=["setuptools>=45", "wheel", "setuptools_scm[toml]>=6.0"],
install_requires=requirements,
package_data={
'cram2fastq': [
'cram2fastq/cramfastq.sh',
'cram2fastq/cramfastq_bulk.sh',
'cram2fastq/cram2fastq.py',
'cram2fastq/rename_fastq2.py',
'cram2fastq/rename_fastq.py',
]
},
data_files=[('bin', [
'cram2fastq/cramfastq.sh',
'cram2fastq/cramfastq_bulk.sh',
'cram2fastq/cram2fastq.py',
'cram2fastq/rename_fastq2.py',
'cram2fastq/rename_fastq.py',
])],
include_package_data=True,
classifiers=[
"Programming Language :: Python :: 3.7",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Unix Shell",
],
zip_safe=False)