-
Notifications
You must be signed in to change notification settings - Fork 0
/
pom.xml
112 lines (112 loc) · 3.78 KB
/
pom.xml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
<?xml version="1.0"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>uk.org.cinquin.mutinack</groupId>
<artifactId>mutinack.jar</artifactId>
<version>1.0-SNAPSHOT</version>
<packaging>jar</packaging>
<name>Maven Quick Start Archetype</name>
<url>http://maven.apache.org</url>
<!--dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12.0</version>
<scope>test</scope>
</dependency>
</dependencies>-->
<build> <!-- Not used for main build because Maven selects the wrong Java version by default under OS X; that problem can be addressed but it is easier to just use ant. -->
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-antrun-plugin</artifactId>
<version>1.8</version>
<executions>
<execution>
<phase>compile</phase>
<configuration>
<target>
<!-- Will run build.xml in legacy-client/ folder -->
<ant dir="."/>
</target>
</configuration>
<goals>
<goal>run</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-site-plugin</artifactId>
<version>3.0</version>
<configuration>
<reportPlugins>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>findbugs-maven-plugin</artifactId>
</plugin>
</reportPlugins>
</configuration>
</plugin>
<plugin>
<groupId>org.jacoco</groupId>
<artifactId>jacoco-maven-plugin</artifactId>
<version>0.7.5.201505241946</version>
<configuration>
<dataFile>${basedir}/target/jacoco.exec</dataFile>
<sourcefiles encoding="UTF-8">
<fileset dir="${basedir}/src"/>
</sourcefiles>
<excludes>
<exclude>**/picard/**</exclude>
<exclude>**/samtools/**</exclude>
<exclude>**/PosByPosProtoManipPB*</exclude>
</excludes>
</configuration>
<!-- <executions>
<execution>
<id>prepare-agent</id>
<goals>
<goal>prepare-agent</goal>
</goals>
</execution>
</executions> -->
</plugin>
<!--<plugin>
<groupId>org.eluder.coveralls</groupId>
<artifactId>coveralls-maven-plugin</artifactId>
<version>4.0.0</version>
<configuration>
<sourceEncoding>UTF-8</sourceEncoding>
<repoToken></repoToken>
<sourceDirectories><sourceDirectory>src</sourceDirectory></sourceDirectories>
</configuration>
</plugin>-->
</plugins>
</build>
<reporting> <!-- Only used for Jenkins integration; actually run from ant findbugs task -->
<plugins>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>findbugs-maven-plugin</artifactId>
<version>2.5.2</version>
<configuration>
<findbugsXmlOutput>true</findbugsXmlOutput>
<findbugsXmlWithMessages>true</findbugsXmlWithMessages>
<xmlOutput>true</xmlOutput>
<excludeFilterFile>findbugs_exclude.xml</excludeFilterFile>
</configuration>
</plugin>
</plugins>
</reporting>
</project>