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NEWS
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NEWS
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Changes in version 1.10.0
OTHER CHANGES
o Minor metadata updates.
Changes in version 1.8.0
NEW FEATURES
o Added a “private_clonotypes” function.
Changes in version 1.4.0
BUG FIXES
o Minor packaging corrections (NAMESPACE, etc.).
Changes in version 1.2.0
NEW FEATURES
o Added a “long” option to yassai_identifier(), where every amino acid is
represented. This solves the problem of ID collisions, where a single
identifier could be produced by two different clonotypes.
o Added a new option to clonotype_table() for randomly sampling libraries.
o Added a new mode to common_clonotypes() for calculating the abundance
relatively to one library.
o Unified the syntax of common_clonotypes() and unique_clonotypes().
BUG FIXES
o Removed infinite loop in yassai_identifier() when the germinal V
sequence was completely absent from the CDR3.
o Corrected output bug where “integer(0)” was returned if the V–J
boundary was a codon boundary.
o yassai_identifier(): properly encode the names of the V and J segments.
Changes in version 1.0.0
o Initial release in Bioconductor.