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DESCRIPTION
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DESCRIPTION
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Package: clonotypeR
Type: Package
Title: High throughput analysis of T cell antigen receptor sequences
Version: 1.11.2
Date: 2016-04-23
Author: Charles Plessy <[email protected]>
Maintainer: Charles Plessy <[email protected]>
Description: High throughput analysis of T cell antigen receptor sequences
The genes encoding T cell receptors are created by somatic recombination,
generating an immense combination of V, (D) and J segments. Additional
processes during the recombination create extra sequence diversity between the
V an J segments. Collectively, this hyper-variable region is called the CDR3
loop.
.
The purpose of this package is to process and quantitatively analyse millions
of V-CDR3-J combination, called clonotypes, from multiple sequence libraries.
License: file LICENSE
Imports: methods
Suggests: BiocGenerics, edgeR, knitr, pvclust, RUnit, vegan
VignetteBuilder: knitr
Packaged: 2013-12-11 10:22:39 UTC; charles
biocViews: Sequencing
URL: http://clonotyper.branchable.com/
BugReports: http://clonotyper.branchable.com/Bugs/