Makefile

check:
	pre-commit run -a && mypy --config-file pyproject.toml

install:
	cd cellxgene_schema_cli/ && pip install -r requirements.txt && pip install .

clean:
	rm -rf cellxgene_schema_cli/build cellxgene_schema_cli/dist cellxgene_schema_cli/cellxgene_schema.egg-info

### Migration ###
.PHONY: generate-conversion-script
generate-conversion-script:
	python3 -m scripts.migration_assistant.generate_script

### Unit Tests ###
COVERAGE_DATA_FILE=.coverage.$(shell git rev-parse --short HEAD)
export COVERAGE_RUN_ARGS:=--data-file=$(COVERAGE_DATA_FILE) --parallel-mode

unit-test:
	cd cellxgene_schema_cli \
	&& coverage run $(COVERAGE_RUN_ARGS) --source=cellxgene_schema -m pytest --log-level=INFO ./tests
	mv ./cellxgene_schema_cli/$(COVERAGE_DATA_FILE)* ./$(COVERAGE_DATA_FILE).cellxgene_schema_cli

ontology-dry-run-tests:
	coverage run $(COVERAGE_RUN_ARGS) -m pytest --log-level=INFO scripts/schema_bump_dry_run_ontologies/tests

gene-dry-run-tests:
	coverage run $(COVERAGE_RUN_ARGS) -m pytest --log-level=INFO scripts/schema_bump_dry_run_genes/tests

migration-assistant-tests:
	coverage run $(COVERAGE_RUN_ARGS) -m pytest --log-level=INFO scripts/migration_assistant/tests

### Test Reporting ###
.PHONY: coverage/combine
coverage/combine:
	coverage combine --data-file=$(COVERAGE_DATA_FILE)

.PHONY: coverage/report
coverage/report-xml: coverage/combine
	coverage xml --data-file=$(COVERAGE_DATA_FILE) -i --skip-empty

.PHONY: coverage/report
coverage/report-html: coverage/combine
	coverage html --data-file=$(COVERAGE_DATA_FILE) -i --skip-empty

### RELEASE HELPERS ###

pydist: clean
	cd cellxgene_schema_cli && python setup.py sdist bdist_wheel

# For displaying the current version
current_version = $$(awk '/current_version =/ { print $$3 }' .bumpversion.cfg)

# Show the current version
show-current-version:
	@echo $(current_version)

# Create a release candidate version from a previously released version.  Commit then version change to a new release branch.
# Set PART={major,minor,patch} as param to make the version bump happen automatically.
create-release-candidate:
	bumpversion --config-file .bumpversion.cfg $(PART) --allow-dirty
	git checkout -b release-version-$$(awk '/current_version =/ { split($$3,v,"-"); print v[1] }' .bumpversion.cfg)
	@echo "Version bumped part:$(PART) to "$(current_version)". Ready to commit and push"

# Create another release candidate version from a previously created release candidate version, in case the previous release candidate had errors. Commit the version change to the current branch.
recreate-release-candidate:
	bumpversion --config-file .bumpversion.cfg prerelversion --allow-dirty
	@echo "Version bumped part:rc to "$(current_version)". Ready to commit and push"

# Build dist and release the release candidate to Test PyPI
release-candidate-to-test-pypi: pydist
	pip install twine
	python -m twine upload --repository testpypi cellxgene_schema_cli/dist/*
	@echo "Release candidate dist built and uploaded to test.pypi.org"

# Build final dist (gets rid of the rc tag) and release final candidate to TestPyPI
release-final-to-test-pypi:
	bumpversion --config-file .bumpversion.cfg prerel --allow-dirty --tag
	$(MAKE) pydist
	python -m twine upload --repository testpypi cellxgene_schema_cli/dist/*
	@echo "Final release dist built for "$(current_version)" and uploaded to test.pypi.org"
	@echo "Please test the release on Test PyPI"

release-to-pypi: pydist
	pip install twine
	python -m twine upload cellxgene_schema_cli/dist/*
	@echo "Release uploaded to pypi.org"
	@echo "Please test the release on PyPI"