diff --git a/experiments/gephi/README.md b/experiments/gephi/README.md index 63ee1cf7..92279aa4 100644 --- a/experiments/gephi/README.md +++ b/experiments/gephi/README.md @@ -1,4 +1,677 @@ -`gephi` executes by running a _native_ executable, so I am unsure how can I -attach the agent to it. +Reference: https://github.com/ASSERT-KTH/rick-experiments/tree/main/gephi -Gephi version: [`0.10.1`](https://github.com/gephi/gephi/releases/tag/v0.10.1) + + +1. Clone and build the project. +2. Change `default_options` in `modules/application/target/gephi.conf` to: + ```text + default_options="--branding ${branding.token} -J-javaagent:/home/aman/personal/who-are-you/watchdog-agent/target/watchdog-agent-0.8.1-SNAPSHOT.jar=fingerprints=/home/aman/experiments/runtime-integrity/gephi/modules/application/target/classfile.sha256.jsonl,skipShutdown=true -J-Dsun.java2d.metal=true -J-Dsun.java2d.noddraw=true -J-Dsun.awt.noerasebackground=true -J-Dapple.awt.graphics.UseQuartz=true -J-Dnetbeans.indexing.noFileRefresh=true -J-Dnetbeans.winsys.hideEmptyDocArea=true -J-Dplugin.manager.check.interval=EVERY_DAY -J-Dapple.awt.application.appearance=system -J--add-opens=java.base/java.net=ALL-UNNAMED -J--add-exports=java.desktop/sun.awt=ALL-UNNAMED -J--add-opens=java.desktop/javax.swing=ALL-UNNAMED -J--add-opens=java.base/java.nio=ALL-UNNAMED -J--add-exports=java.desktop/sun.awt=ALL-UNNAMED" + ``` + > Basically, add `-J-javaagent:=fingerprints=,skipShutdown=true` to `default_options`. +3. Then run: + ```shell + cd modules/application + mvn nbm:cluster-app nbm:run-platform + ``` + +### Reproduction details + +1. `maven`: Apache Maven 3.9.1 (2e178502fcdbffc201671fb2537d0cb4b4cc58f8) +2. `java`: 17.0.5 oracle +3. `OS`: Ubuntu 22.04 +4. `classfile-fingerprint`: `bfef0ae093b3afcc1aeb30ca5a601326afaeb0ba` +5. `watchdog-agent`: `bfef0ae093b3afcc1aeb30ca5a601326afaeb0ba` +6. Gephi version: [`0.10.1`](https://github.com/gephi/gephi/releases/tag/v0.10.1) + +## Results + +```text +[INFO] [NOT WHITELISTED]: org/netbeans/Main +[INFO] [NOT WHITELISTED]: org/netbeans/MainImpl +[INFO] [NOT WHITELISTED]: org/netbeans/MainImpl$BootClassLoader +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader +[INFO] [NOT WHITELISTED]: org/netbeans/ProxyClassLoader +[INFO] [NOT WHITELISTED]: org/netbeans/MainImpl$1 +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$1DelayedManifest +[INFO] [NOT WHITELISTED]: org/netbeans/Archive +[INFO] [NOT WHITELISTED]: org/netbeans/Stamps$Updater +[INFO] [NOT WHITELISTED]: org/netbeans/ProxyURLStreamHandlerFactory +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$JarURLStreamHandler +[INFO] [NOT WHITELISTED]: org/netbeans/ProxyClassParents +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$Source +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$DirSource +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$JarSource +[INFO] [NOT WHITELISTED]: org/netbeans/ArchiveResources +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$JarSource$1VFile +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$JarURLStreamHandler$1 +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$NbJarURLConnection +[INFO] [NOT WHITELISTED]: org/netbeans/JarClassLoader$JarSource$1 +[INFO] [NOT WHITELISTED]: org/netbeans/ProxyClassPackages +[INFO] [NOT WHITELISTED]: org/netbeans/Stamps +[INFO] [NOT WHITELISTED]: org/netbeans/Stamps$Worker +[INFO] [NOT WHITELISTED]: org/netbeans/Clusters +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler$Execute +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler$Args +[INFO] [NOT WHITELISTED]: org/netbeans/PatchByteCode +[INFO] [NOT WHITELISTED]: org/netbeans/PackageAttrsCache +[INFO] [NOT WHITELISTED]: org/netbeans/NbInstrumentation +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/CLITestModuleReload +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/CLICoreBridge +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/CLIOptions +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Asm +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Asm$CtorDelVisitor +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Asm$CallParametersWriter +[INFO] [MODIFIED]: org/openide/filesystems/FileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/FileSystemCompat +[INFO] [MODIFIED]: org/openide/filesystems/AbstractFileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/AbstractFileSystemCompat +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/MainLookup +[INFO] [NOT WHITELISTED]: org/netbeans/Module +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/NbPlaces +[INFO] [NOT WHITELISTED]: org/netbeans/Stamps$Store +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler$Server +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler$Server$OS +[INFO] [NOT WHITELISTED]: org/netbeans/CLIHandler$Server$IS +[INFO] [NOT 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org/netbeans/core/startup/Splash$SplashRunner +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Splash$SplashPainter$1 +[INFO] [MODIFIED]: org/openide/filesystems/MultiFileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/MultiFileSystemCompat +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/NbRepository +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Splash$TextBox +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/SessionManager +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/SystemFileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/FileSystem$Status +[INFO] [NOT WHITELISTED]: org/openide/filesystems/EnvironmentNotSupportedException +[INFO] [MODIFIED]: org/openide/filesystems/FileExtrasLkp +[INFO] [NOT WHITELISTED]: org/openide/filesystems/CompatFileExtrasLkp +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/Asm$NullSignVisitor +[INFO] [MODIFIED]: org/openide/filesystems/LocalFileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/LocalFileSystemCompat +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/LocalFileSystemEx +[INFO] [NOT WHITELISTED]: org/openide/filesystems/FileSystemCompat$SystemStatus +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/ScaledBitmapIcon +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/LocalFileSystemEx$DelegatingAttributes +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/base/LayerFactory$Provider +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/impl/BinaryLayerFactoryProvider +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/base/LayerFactory +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/ModuleLayeredFileSystem +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/LayerCacheManager +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/BinaryCacheManager +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/ParsingLayerCacheManager +[INFO] [NOT WHITELISTED]: 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org/netbeans/Util$ModuleProvider +[INFO] [NOT WHITELISTED]: org/netbeans/StandardModuleData +[INFO] [NOT WHITELISTED]: org/netbeans/JaveleonModule +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/ArchiveURLMapper +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/layers/NbinstURLMapper +[INFO] [MODIFIED]: org/openide/filesystems/JarFileSystem +[INFO] [NOT WHITELISTED]: org/openide/filesystems/JarFileSystemCompat +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies$Parser +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies$Handler +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies$Dep +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies$ModuleDep +[INFO] [NOT WHITELISTED]: org/netbeans/core/startup/AutomaticDependencies$TokenDep +[INFO] [NOT WHITELISTED]: 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