Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Move to mappy #29

Open
Donaim opened this issue Jul 30, 2024 · 0 comments
Open

Move to mappy #29

Donaim opened this issue Jul 30, 2024 · 0 comments
Labels
enhancement New feature or request

Comments

@Donaim
Copy link
Member

Donaim commented Jul 30, 2024

We are currently using minimap2 as an executable, but there are Python bindings for it, called mappy.
By using bindings:

  • we won't have to parse the output of minimap (samfile)
  • we won't need to install minimap separately.
@Donaim Donaim added the enhancement New feature or request label Jul 30, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@Donaim