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Contig stitcher: fix munging of non-touching contigs Build and Test MiCall #1293: Commit 7f3cdc0 pushed by Donaim
November 14, 2023 18:27 44m 57s newfangled-stitching
newfangled-stitching
November 14, 2023 18:27 44m 57s
Contig stitcher: add the stitch_consensus function Build and Test MiCall #1292: Commit 57805fa pushed by Donaim
November 14, 2023 18:24 1h 10m 19s newfangled-stitching
newfangled-stitching
November 14, 2023 18:24 1h 10m 19s
Add tests for connect_cigar_hits Build and Test MiCall #1291: Commit 751d8f2 pushed by Donaim
November 14, 2023 06:04 23m 41s newfangled-stitching
newfangled-stitching
November 14, 2023 06:04 23m 41s
Cigar tools: remove the unused "closest_*" methods Build and Test MiCall #1290: Commit fb718be pushed by Donaim
November 14, 2023 05:32 25m 5s newfangled-stitching
newfangled-stitching
November 14, 2023 05:32 25m 5s
Small improvements to and cleanup of contig stitcher Build and Test MiCall #1289: Commit c460e9f pushed by Donaim
November 14, 2023 05:16 41m 8s newfangled-stitching
newfangled-stitching
November 14, 2023 05:16 41m 8s
Improve documentation of CIGAR tools Build and Test MiCall #1288: Commit bee4b8c pushed by Donaim
November 14, 2023 05:16 42m 44s newfangled-stitching
newfangled-stitching
November 14, 2023 05:16 42m 44s
Contig stitcher: throw away parts of query after cuts Build and Test MiCall #1287: Commit adb7b53 pushed by Donaim
November 14, 2023 02:32 45m 56s newfangled-stitching
newfangled-stitching
November 14, 2023 02:32 45m 56s
Contig stitcher: reimplement complete coverage check Build and Test MiCall #1286: Commit 224fbd0 pushed by Donaim
November 14, 2023 01:45 23m 42s newfangled-stitching
newfangled-stitching
November 14, 2023 01:45 23m 42s
Cigar tools: divide __add__ operation into connect and basic __add__ Build and Test MiCall #1285: Commit 66fcafd pushed by Donaim
November 13, 2023 20:29 23m 50s newfangled-stitching
newfangled-stitching
November 13, 2023 20:29 23m 50s
Cigar tools: fix gaps tests Build and Test MiCall #1284: Commit 712ef3b pushed by Donaim
November 13, 2023 20:06 23m 55s newfangled-stitching
newfangled-stitching
November 13, 2023 20:06 23m 55s
Cigar tools: fix some more cut edge cases Build and Test MiCall #1283: Commit 2ea41b8 pushed by Donaim
November 13, 2023 20:06 34m 12s newfangled-stitching
newfangled-stitching
November 13, 2023 20:06 34m 12s
Cigar tools: reimplement CoordinateMapping Build and Test MiCall #1282: Commit 3fb21ff pushed by Donaim
November 13, 2023 20:06 24m 48s newfangled-stitching
newfangled-stitching
November 13, 2023 20:06 24m 48s
Cigar tools: prevent floating point errors in cut_reference Build and Test MiCall #1281: Commit 6c6786e pushed by Donaim
November 11, 2023 20:19 24m 30s newfangled-stitching
newfangled-stitching
November 11, 2023 20:19 24m 30s
Cigar tools: prevent floating point errors in cut_reference Build and Test MiCall #1280: Commit c1318f6 pushed by Donaim
November 11, 2023 20:18 34m 51s newfangled-stitching
newfangled-stitching
November 11, 2023 20:18 34m 51s
Contig stitcher: implement the more precise gap coverage check Build and Test MiCall #1279: Commit 8888bb7 pushed by Donaim
November 11, 2023 19:56 24m 5s newfangled-stitching
newfangled-stitching
November 11, 2023 19:56 24m 5s
Contig stitcher: rebase gap splitting on the new strip operation Build and Test MiCall #1278: Commit a2f2c2c pushed by Donaim
November 11, 2023 19:53 38m 1s newfangled-stitching
newfangled-stitching
November 11, 2023 19:53 38m 1s
Cigar tools: reimplement strip operations Build and Test MiCall #1277: Commit f00d2c7 pushed by Donaim
November 11, 2023 19:53 24m 30s newfangled-stitching
newfangled-stitching
November 11, 2023 19:53 24m 30s
Tests: add two more edge cases for Cigar tools Build and Test MiCall #1276: Commit 6b2bbd6 pushed by Donaim
November 11, 2023 02:36 1h 23m 56s newfangled-stitching
newfangled-stitching
November 11, 2023 02:36 1h 23m 56s
Cigar tools: improve semantics of "closest" Build and Test MiCall #1275: Commit 8f41cf5 pushed by Donaim
November 11, 2023 02:19 24m 7s newfangled-stitching
newfangled-stitching
November 11, 2023 02:19 24m 7s
Tests: move fixed_random_seed to shared utils.py file Build and Test MiCall #1274: Commit 017a93a pushed by Donaim
November 11, 2023 02:07 42m 40s newfangled-stitching
newfangled-stitching
November 11, 2023 02:07 42m 40s
Tests: do not auto-use mock aligner Build and Test MiCall #1273: Commit ba17fdc pushed by Donaim
November 11, 2023 02:07 48m 6s newfangled-stitching
newfangled-stitching
November 11, 2023 02:07 48m 6s
Cigar tools: improve semantics of "closest" Build and Test MiCall #1272: Commit d34a2fc pushed by Donaim
November 11, 2023 02:00 10m 58s newfangled-stitching
newfangled-stitching
November 11, 2023 02:00 10m 58s
Cigar tools: improve semantics of "closest" Build and Test MiCall #1271: Commit 11af360 pushed by Donaim
November 11, 2023 01:56 11m 28s newfangled-stitching
newfangled-stitching
November 11, 2023 01:56 11m 28s
Cigar tools: improve semantics of "closest" Build and Test MiCall #1270: Commit 0158257 pushed by Donaim
November 11, 2023 01:52 11m 40s newfangled-stitching
newfangled-stitching
November 11, 2023 01:52 11m 40s
Contig stitcher: skip insignificant gaps Build and Test MiCall #1269: Commit 3cba9d4 pushed by Donaim
November 11, 2023 00:57 42m 3s newfangled-stitching
newfangled-stitching
November 11, 2023 00:57 42m 3s