diff --git a/tests/expected-results-large-csv/blast.csv b/tests/expected-results-large-csv/blast.csv
index ba58280..95436d9 100644
--- a/tests/expected-results-large-csv/blast.csv
+++ b/tests/expected-results-large-csv/blast.csv
@@ -1,130 +1,117 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,1938,1,1691,545,2481,0.0,1676,82.147,1592,plus,49-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N6GA1AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-N-NANTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG9-N-N-N7TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG12-N-N-N8AG44CT17TC47TC27TG99CG10-N-N-N-N-N-N-N-N-N26GA23AG2GA30GATC36TC32CT11AG5CTAT7AG30-N-N-N5GA20AG17AG8AG2CT26CT8GA9AG7AG27-N-N-N-N-N-N-N-N-N3AG1GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5ACGA12AG24AG-N-N-N1CT9CT25TC24AG25GA9TC11CT6-N-N-N-N-N-N-N-N-N18GT1-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N9GA8CT7AG6
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,196,1809,1997,448,643,3.77e-58,222,92.347,181,plus,12GNTNAN2-G-A26-N7-N9GC21CT9GTAG46GA2-N21-N9-N17
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,200,2,180,10730,10929,2.85e-51,199,89.500,179,plus,21-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,9890,329,9278,569,10443,0.0,9284,83.893,8297,plus,11TC10AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA1AG3-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT4AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NCA12-N-N14-G-A-A-G-A-A9AG17-N-N-N-NAC5-N-N3-N-N-N-N-N11-T5-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49CA39AG33GA32GT5AG42TG27GA8AT31CGAC10AG25GA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG5CA1CA1GA5AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG7AG20CTAC4GA6GA64TC6-N-N-N147GT16AC93-N-N-N-N-N-N-N-N-N7YCWAYC2WA16TA5AG67GA12AG23CT15CT7CT8TC8GA30-N-N-N9GT16GA23WA26AC14GA2AG14GA2AG14AG9-N-N-N-N-N-N-N-N-N10AG1TG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGC2AG23TCTA3GA10AG1-N-N-N1TC60GN22GN4GN19GT6-N-N-N-N-N-N-N-N-NGN12AN6-N9CT9TC4-N-N-N-N-N-N-N-N-N-N-N-N3AG44-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N17CT5-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTN18-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AG9GA14AG6CA1CA23AG20TC33AGGA87CTTA11GA65AC4TC17CT59TC57AC13GA42GA25TC83TC2CT2AG35TC33GA39TC33CT71TC74AG16AG6GA2GA2GA9CT4GA1GA7CT2AGCA30TC75ACGN4AN32TN22CT44CT1GA4TC8GA2AG12AC18GA11GA2AG39TA34GA56GA2AG7GA1AGCT15TA39AG1CT8TC18-N-N-N7GA7CT13GA12AG13AG50TC26GA2AG47CT5GA5AG14GA9AG3AG3AG8GA3GA5CA3CATGAG35TC13GA5GA3TC62CA1AG19AG39TC11AG47CT3GA14AG32-N-N-N2TA69-N-N-N17CT3GA8-N-N-N56AG27GA70GA11TC5TC32AC18ACGC8CT4GA2AG1GA26AG17AC80TG14TC26CT34GA3CT18GA43AG3-N-N-N74CT56GA17GA63-N-N28CT11GATGTG13GAGAGAGA27AT11AG15TC16TG-N-N-N-N-N-N4GA3GA78AG12GC18AC21CG7CT5CT11CA14GT3TA9AG1AT38-N-N-N8AG8AG16CT16-N-N-N-N-N-N-N-N-N-N-N-N28CGAG31AG20GA6CT6AC2-N14TC7GA7AG25AGTGTA3-N-N-N14GA39-N-N-N9AC31CT3-N-N-N11GA4GA16GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2AGGAAGAG5CT3AG15TN-N-C41AG10CA2CA44TCGA1CG5CG37-N-N-N-N-N-N9CA7AG20TA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2AT2-A2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-T1AG26AGTC21AGTA1CT5AGAT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT15CA3TG22-N-N5GA8-G-G-A-T-C-A-G-G-A4GT1GA5AT13GNGNGNTNGNGNANGNANTNGNGN4CT13-N-N-N-N-N-N1TCAG26AT-N-N-N-N-N-N38GA17AC29TAGA49CT12GC7GA1TA21CT12GA25TC18CG10GA8AG22GC6GT9T-T-G-1GCGC3GACT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1AT6GA2GT2AC1AG-G-T-T6GA2GA3CTGAGA-T-T-T4ACTA4A-T-G-G-A-1AC2G-4GA4AGAT19GC5GC5GA7GATGGA4AG5AT4TC1CG2TGTAAG32CG1ATCACT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT4CT5CT2GA6CT27-N-N-N12GC1GA21GA32AG6CA3CT8AG10CA16-N-N-N26AG2AG5TC3CT1GA30-N-N-N15GACACA15GA1TC23CGCG52CA1GA3CACNANGNANGNAN18GTTA1AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N3AG5-A-T-A3AG4GA-N-N-N-N-N-N-N-N-N-N-N-N18AC21CA9AC7CT1AG1CA12CTAT2TA1GAGAAG3ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AG7GTCTAC15CT13CT16GA23TA7AG18TNTNTNANANTNANGNTNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-A2-T2GA1AG2GAACAT3TACAATAGAG2ACCT2TA3GCGC2GA1GAAGCT2AT2CA24TA5-N-N-N4TGGA38CTAGGCCA11AC-N-N-N11TC2TC20AG9AGAG1AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T-G1CG6GA1GCTA10CT23GA47AG5AG27-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA53AG20-N-N-N-N-N-N-N-N-N23GA5GA39TC22CT2AG15AG8GA1GA12AC16GA2GA8CT11AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT9AG1TG15GC7CG9AG13CT6CT2TA1CTTC10AC5AG2CA2GA28AC3AG4AC26AG28TA22CT2GA5TG15GACT28CA7TC8AG2GA2TC15AGACCT-N-N-N-N-N-N3GA5-N-N-N20AC30AG5AGTGTG1GC9CT4CT7CA1TC7AT3TC57AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N23TC14AG10GT6GA4AG1AGAG12CT3CT1CT7CT15TC24GATC1GA5GA6AT6TC4GT30GA5GA3-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9CA12ACGA2GATG1TG1ANTN-N-G-G10AG1TG2AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT9-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N16CG35CG4GT1AG45AG2CT9GA4-N-N-N21AG32CG1GT33TC2-N-N-N-N-N-N1CT14AT18GT5TCAC8GA5-N-N-N3AG12CA1AT1CT-N-N-N12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,197,1,182,10247,10443,1.48e-41,169,81.218,160,plus,7GT5TCAC8GA5-N-N-N3AG12CA1AT1-T-N-NCN12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,4508,1,4082,5,4512,0.0,4718,87.866,3961,plus,14-C-A-C1GNGNTN4GAACAG51-N5GA12-N-N9GA4-N-NCT5TA23TA7-N11TG9GT7GA1-N-N-N4TCGACA11AC16AG1AG10-N1GA5GT10AG10AGTA5AG52-N4AT1-N-N5TC7TA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N30-N7-N9GC79GA2-N21-N9-N16TC1-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33TC1CG12CTACAG44GA154AG27AG7GA25GC3GA14-N-N-N17GA27AC3AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N114-N-N-N8AG138TG4CT41GA63-N-N-N-N-N-N-N-N-N29CT18AC22GA8TC59TC72-N-N-N35GA17CG6TC31GA17AG14GT12-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N19AG20-G4-N-NGN1AT35TC29GA49-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N18CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16GC1-N-N-N-N-N-N30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG88-N-N-N17AG11AG12GA52CT128CT21TA31AG12CT86
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,333,1,318,10088,10420,5.99e-97,352,87.988,293,plus,14TCGAGC5GA1AG4-N-N-N52GA21GA3AGCT5TA7-N-N-N-N-N-N16TA18TG5GT3GA11-N-N-N3GACA11AC4-N-N-N12AG1AG17GT10AG10AGTA5AG28AG27
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,286,381,634,10644,10929,3.84e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N21-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N4TC22-N-N-N-N-N17-N-N-N45
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,91,4089,4178,494,584,3.71e-28,123,97.802,89,plus,7-N9GC73
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,5632,666,6007,1596,7224,0.0,5972,87.749,4942,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108-N-N-N-N-N-N-N-N-NCA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG30-N-N-N5GA5AG2TC11AG17AG8AG38GA2GA14AG27-N-N-N-N-N-N-N-N-N4CT4GAGA1AT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT1AC4CA35-N-N-NCACT6AG28TC5AG44GA18GA5CT3-N-N-N-N-N-N-N-N-N20-N6AG11TCCT4-N-N-N-N-N-N-N-N-N-N-N-N15CT4CT7CA4-N-N-N-N-N-N-N-N-N-N-N-NANGNANANANTNTNCNCNTNCNANGNANGNCNANGNANCNCN18ANGNCNCNCNCNTNCNCN17TC4-G-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A2AGGA11TC1-N-N-N-N-N-N13AC1AG2GA8GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA1-N-N-N13GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG6-N-N-N2AT2CA27AG22AG6AG8-N-N-N30-N-N-N17TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA21-N-N-N13CA31GA28TC38CT35AG63-N-N28TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC15-N-N-N-N-N-N1AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT37-N-N-N30AG5GT13GA-N-N-N-N-N-N-N-N-N-N-N-N26AT1AC53AG6TC9-N19AG10GAAT17CT5AGCACTAT3-N-N-N2AC2AT1AG1CT4AG3TC29AG5-N-N-N30AC10TC2-T-N-N17AGCA15AG2GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TGGA2AG2AG24-N-N2AC38GAGA3CG46GT5TC3CAAC43AN-N-N-N-N-N-C8TG3CA3AGGA18TC1CT5CT14AG8-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCACGA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT8GAGT28-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC1AGAGAT5AG5AC3GT22-N-N8CT5GA1ANTNCNANGNGNANANGN2TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC12-N-N-N-N-N-N21GA1GA5TA-N-N-N-N-N-N37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG6
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,3087,6046,8799,7335,10420,0.0,2303,77.227,2384,plus,3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG3CT2TC27-N-N-N6AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA15-N-N-N20AG8GA11AG11TC2CT9AG5-N-N-NAG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39-A-A-T-C-C-G3-C-C-AAG2TA1TG1GC11AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N2GACA1GA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN20CT3-A3A-2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG5AC12ACTCGA7AT42CTAT6GA19-T-T-T-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G-T-A-C-T-T-G-G3-AGC1TG2TG2-T-C2CA2GA2TCATAG1CA4CG1AG1AC1ACTA5AC5GA21-N-N-N4GT7GA28TC8GAACTA6-A-N-NGN2CT17AG2AGAC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNANANANTN5TC1CAACGA1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA5-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18AG1-G-N-NANGNGNAN1CGGATA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT7CT38GC3CA16AG6-N-N-N-N-N-N-N-N-N23AG12CT29AC28AG15GA5TG17CA56AG14AG10CT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA10-N-N-N-N-N-N9-N-N-N2AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G21GA2TA2AG2GNCN-N-A-T28GAAG1ANGNANANTNTNGNANTNCNCNANANGNGNCNCNTNGNCNTNGNCNANANGNGNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG17CA1GA4AG18TC8TC26TG2AG4TC41AG-N-N-N-N-N-N-N-N-N-N-N-N2AG2CT10GC33AG6TG1GA48TCGAGC5GA6-N-N-N5AT9TC5GA1TC14AC13GA3AG14AG13TA7-N-N-N-N-N-N16TA18TG5CTCA1AGGA4GAAG5-N-N-N3GA12AC1TA2-N-N-N3CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,737,46,669,1599,863,5.32e-174,609,80.190,591,minus,33TC8-N-N-N12TC68TG1GT16AT7AG3-A-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTN3GACTCTTG4TG15CT11CT17-N-N-N14CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T12-N-N-N-N-N3-N-N6-N-N-N-N24-N-N-N-N-N-N11
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,682,8482,9069,5,686,7.11e-135,479,77.859,531,plus,14-C-A-C1GNGNTN4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN6TA23TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG12-N1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N6TC16CT6-N7-N9GC21CT24GA35-N21-N9-N18-N19-N-N2-N6-N10
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,236,8863,9069,10645,10880,9.60e-50,196,86.017,203,plus,5-N10CN1-T-N6-N6-N9-N-N-N1GC10-N11CT2-N10-N12GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N16
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,5359,882,5935,1866,7209,0.0,5619,87.498,4689,plus,6TC32TC59TC72-N-N-N5GA5AG17CT17TA5AG29CT8GA32GT12-N-N-N-N-N-N-N-N-N11CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA2GA1GA10AG14GA10-N-N-N2GT34TC29GA49-N-N-N-N-N-N-N-N-N11AT8-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA11CT4CT3AG6AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG14-N-N-N-N-N-N-N-N-N3GA11TG1TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2A-13TCTC1-N-N-N-N-N-N22CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA17AG41CT13AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG57AG7TC32GA11TC56CT69CT45CT39AG95AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA2GA9GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA29-N-N-N2CT10GA3AG5TA5AG12TA13AG38CT38AG12AG10GA2TC23TC2AG2AG2AT4CT18CT3GA1CT18AG2TA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG6-N-N-N5GA5AG35CT6AC1AG15-N-N-N15TA14-N-N-N57TC26AG61GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29CA18CG7AGCA22GT99AG47-N-N-N45GA13GA14TC23GA32AG17AG2TC34GA25-N-N6CA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTANGN-N-N-N-N6CT1AG3GA1GA14AT35AG25GA27CA29TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC-N-N-N14GA2GA12AGTC10CA8-N-N-N-N-N-N-N-N-N-N-N-N1GA2AT21GT1GC24ACGA9GA17AG6TC9-N10AG8AG8AG1GAAT11GA2CT9GACT4-N-N-N2TC6CT4AG23AG15-N-N-N8TCCA23GC7TC2-T-N-N12AG4AGGA2CT5GA6AG2CATC1ANCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG1TC3-G-G24-N-N9GA20GA10GAGA5GT2CT4GA23AT8CAGACGGTAT2CT3TA9GC37-N-N-N-N-N-N9AG3CA4GA1TC2CT1GA2ACCT7TC4TC26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26TA1TA14CT2TG5TC6CA20ATGT7AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA-A10AT2CA8AC3GT22-N-N14GA1ANCNCNANANGNANANGN2TA1GAGT4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-4TG5CG16-N-N-N-N-N-N4CTAG4CT5AG3-T1GC2GA1CA-A-A-N-N-N-N-N-N1CT36AG6GA28CT11CT11CT5CT14TC34AT2-T-G-G7AG14TCGACTAG9AG10TA76CG6CG6
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,3120,5967,8735,7333,10443,0.0,2467,78.942,2463,plus,3GA1AGTG5-G4AG2GA1CA12TC3GA3CG4GATG8AG9AG3CG8CT17GA2GA3AC3TAAG1GTGA6AC4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNCNTNANTNANANTNANCNCN7GA5TC2AG7TA5AGCT19-N-N-N62GA5GTGA6ACTG16TC5AC6TC9-N-N-N42TC24GA3-G-N-NTN15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC10-A-A-A3-T-C-C4AC2TG1TG19TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1CA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN39GA1GC9AC8GAAGTC8GA9-G-G3ATGA1-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA1GA6GA7CG23GA7TC16AG23AT26ATAT2GA1-N-N-N-N-N-N-N-N-N-NANCNTNANCNANGNGN4ACAT3-A-G3-T-G-A3AGGT10AT4TG2-G-T-G1TC1TCTA5AC10AGGA4GAGA6GA2-N-N-N12GA46-A-N-NTN23AG3CT2CATC13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7A-T-G-3C-G-G-2AG1C-A-C-1AT1TC2AG69CA36GA4-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT46AC5AG14AG6-N-N-N-N-N-N-N-N-N2TA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGTAT4TC2ATAC10CG46GA30GA10GT18AT4TC20AGAG20AG37CT22TA7GA2GN-N-N-N-N-N-C8-N-N-N20CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG9TC7AG25GA5GAGT19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT1-N-N-N-N-N-N-N-N-N-N-N-N9AN-N-G5AT4TAAG1TGCG6CA3AG2GT1GNGN-N-A-T3GA6GA1ATAG17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CG14GA4AG25GA9TACA9AG7TG6AC8AC12GA8GA2AG4GA3AGGNANAN-N-N-N-N-N-N-N-N-N8CT7GC27AT7GC49TC5TC8CAAG4-N-N-N21GA5AC7GA16GA25AG1AC12-N-N-N-N-N-N16TA13AG1GT2AG5GTGA1TGGA5AG5-N-N-N1CA1GA8GA3AC2TG1-N-N-N16AG2AT12CT3TC1AG16TA5AG21CT1GA16AC1AG13AT1-N-N-N-N-N-N-N-N-N12
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,956,40,881,1812,857,0.0,893,83.577,799,minus,15CT14GA2GA23CT26CA22AC30AG2TC17AG38CT29GT17TC8-N-N-N3AG23CT53CG32-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA5AG1TG5GT20TCCT17-N-N-N3TC69AGCT13AT8TC7CT17TG1CA75CT2TC29CT6CT31CT6TCTGGA23CT24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T-T11CNGNTN-N-N-C-A-G-N-N6-N-N-N-N15TC8-N-N-N-N-N-N17
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,671,8404,8982,5,675,2.50e-141,501,79.136,531,plus,8TC5TC3-N-N-N6AG25GA5AC7GA11-N5GA12-N-N14-N-N1AC28TA7-N6AG1GT2AG6GA1TGGT5AG1GA1-N-N-N3CATCGA8GA3AC2TG17AG2AT5GN1-A5CT3TC1AG16TA5AG21CT1GA4GA11AC1AG9-N4AT1-N-N14GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G11GN-N-N10AGAC11AT6-N7-N9GC56AT22GA2-N21-N9-N16AC1-N19-N-N2-N6
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,6391,559,6512,830,7217,0.0,6748,87.764,5609,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-NANANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT10AG11-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,3119,6517,9254,7303,10420,0.0,2517,79.513,2480,plus,14CT5TC1AG1-A2GAGT2AT1G-4CA1-A-A-A1AG3AG2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG34-N-N-N23TC38GA5GTGA6AC10TA12AC16-N-N-N19AG9GA11AG15TC14-N-N-N16ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GACACA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-A-G-T3-G-A-A3-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA6-N-N-N4GT6AGGA31TC2AT3AC8-N-N-N21TC1AG6GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-A2AG2CAGC1GACT3AT1TC4CT26AG12GA25AT9GA22GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG18-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GT46GC3GA16AG5-A-N-N-N-N-N-N-N-NGN1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA2-N-N-N-N-N-N9-N-N-N20CA17AG17ACGA18TC10TA10CT21CATG2GA33AG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT-N-N-N-N-N-N-N-N-N-N-N-N3TC5AN-N-G5GT22GT1GNGN-N-A-T10GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CG-G2TNGNANAN-N-N-N-N-N-N-N-N16GC9GA19TA3AG1GC4CG1CA48TC9AG4-N-N-N14CT6GA5AC24GA25AGCT13-N-N-N-N-N-N8GA5TC1TA15GT8-T-A-A-G-A-T-A-G-A7-N-N-N3CA12AC1TA2-N-N-N12AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,631,8946,9480,5,635,2.09e-128,458,78.288,494,plus,14TC3-N-N-N5ACAG18CT6GA5AC19-N5GA12-N-N14-N-NCT21GA5TC1TA7-N8GT8-G-A-A-G-T-T-A-G-A3GA1-N-N-N4TCCA12AC1TA14AG12-N1GA5GT8AG1AG6AG3AGTA5AG40ACAT10-N4AT1AN-N3-A11TC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG6AG2GN10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N6TC23-N7-N9GC18GT2CT8ACGT50-N21-N9-N9
-MK115690.1,Ref.39_BF.BR.03.03BRRJ327.EU735536,0,9689,11027,9430,771,9405,1002,10420,0.0,8040,80.806,7620,plus,40GA7CT1AGGC17GA32GA5CA38CT18TC4AG15AC17GT27GAAG5GA1AT27AG15GA19TATC4GT1AG1GA14-N-N-N17AG15GA3GA1GA9GA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNCNANGNCNAGCT3CT17AG5CTAC62GA10GA9-N-N-N20CT6CT1AG59AG104GA62-A-N-N-N-N-N-N-N-NTN20AG8TC20GA29CT2CTAGCT9AG23GA20TC41GA27TC2-N-N-N44GA2TA17GA9AT19AG8TC17AG2GT12-N-N-N-N-N-N-N-N-N4CT7TC2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA2GA39-G-G-NANAN1GT12TC5CT8TA11AC20AG1GA49-G-T-G-N-N-N-N-N-NCNCNAN20-N6AG12CA4-N-N-N-N-N-N-N-N-N-N-N-N19CT6AG6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N3GA6TC5TG7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N7CAAC2AG1AC8CA1GA2CA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6TC3GA9AG14AG15AG4GAGA44GA16CT16GA11AG35GA10CG1AC4TC9CT11AGGA4AG8AG2AGGA19CT12AG4GC14TC59AG13AGAG74GA10AG3AT8GA68CT11AT27GA22CT20AG12CT10TA5CA20CT2AG2CG11TC8TC2CTAG8AG1AC17GAGA4AG2TC20GA30AGGA21AG4AT16AG1CA3GA4AC9AG18GC6CTCT10GA9AGTC9AG5GA16AG6AG3ATCT39TG8GT17CG21GACA12AG2AC44CT14CT2CT14AG1GA12AG2AC9GA20AG31AG5AG2CT2GA2GA65GA7AG9GA50AG29TC14GA5GA1CT9AG3GT1CTATCT12GA12-N-N-N1CT6AG4GA18AG8ATGA13AG26GA20TC2CTTC4AG3TC7CT8GA1AC3AG20TC23CT2GA10CT22AG1TC14AG3AG2CT7TG29TA6TC13AG5GA14TC17GA17TC17AG19GA23AC9GA5TC54TC10TA5CT2GA8GA20GA2CT3-N-N-N11GA44GA8GA6-N-N-N30-N-N-N20GA35AG5TC8TC62CT20GA2AGGA10TCAC1TC15CA11GACA2CT34GA19CT8AG2GA2CT32AG12GA13CT2TA5GA12GAGC30GA81GA5GA14TA14CT11-N-N-N2TC12CA58CT44AC32TC45AG14-N-N5GAAC1GC4CA1CA12CT8TC2AG5GAGA3AG4G-5GT2-C6AG3TC8AC1AG22AG5TC16AT-N-N-N-N-N-N6CT1GA1CT5CA39CT2GA31AGGAGAAG22AG31CT34TC11AGTC1GT6CA9GA1AT18-N-N-N12TC26GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT19AG3CA35GA13CA3GA2AG2AG1AC8-N14TC4GA2GA20AG12ACTCGA3-N-N-N6GA7GA3CT1CT8GA18AG5-N-N-N5AG3TA9GT18CT6-N-N-N11GA4GA15AC6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG10AG4AG15-N-N5AGTC26CT19CACT1CATA13AG3TC4ATTA23CA28AG12AG-N-N-N-N-N-N4GAAGGA2TA2CT3AC1GAAG2GA5TATC6GACA1TCCT1CG2TC2AG14CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CTACAT1CA1-G-T-G3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6T-T-3ATA-2GATC7GA8GTCT8CT15CT7TACT11GA3AC1AGTG7AG-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6GA1CT6ATTA3TA3AC4AG21-N-N11AG6CGACTA2AG5AGTG8AGTG3GAAG3-N-N-N-N-N-N-N-N-N-N-N-N3AC1CTAT1GACT4TG3-N-N-N-N-N-N2GA2GA2GA7GA5CAAT4ACAC-N-N-N-N-N-N8TC37AC3CT20TC14TC1CG3GA1CT9TA5CT14AT2TC5CT4AGCT9AG3GTATTC3AG6GA14CT12AG10AG2GA6GAACGA32GA11AG24CA4CT1CT3GTTG-C-C-A-C3ATGAAC1TN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AGGC2CTTC2GTAGAGGC5TC1GC3TCA-A-T-5TC3AC1CA1TA2AGTC3A-2GA1TGGAAGTA2TA1GCGC-A4AC1AG1GAAC7CT10CTCG2TCGA2AGGACA10AG1GCTAAG7ATAGTCTGTG2GA11AG6AC10ACGA1TC1AG2AGTCGC1TG1TACT3TNANTNANGNGNTNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1-A-C2GA3TC2CTAT5GATC1CA17-N-N-N8CT1TGTG2GT14TC8CT2GA7TA17GAAT3AG4TG5TC2AG2AG2AG1AC3TC1ACAG14GA-N-N-N5TC13GAGA5AG12CT2CT4CA15GA5GAACGTGN-N-N-A2GA4TC1AG4GC7CAAT4CT3AG1TA5TC11GC2GT4CA7GCCAAG3GATA18CT18CACA4-N-N-N-N-N-N2GA5GAAC4GA9GA2-N-N-N-N-N-N-N-N-N-N-N-N1GA1GC1TA14AC-N-N-N-N-N-N-N-N-N-N-N-N3CAGA6CT4TA1CG4CTAGAG4ACCAAC3GA2AG1CA2AGAT6AG4GACATAAGAC1AG1AGTC3GAACGTACATCT1AC2TCGCACGT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA1CA4GA1GTAC3CT2GA10CT6TC6ACTA13GA4GA14TC3TA1ACGTTC1CGAG11GATC2TATG1GACNANTNANANTNANANTNGNGNGNANGNTNANGNTNANCNTNANCNANGNGNGNTNCNANANGNTNANGNCNANGNTNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-T-A-C2GT1CG2-C3CT2AT8CT1AG13AG2-N-N-N21ACAG10GA2CACATC5CTAGGC4CACGAC4GC1-N-N-N2CTGA1GC14GTTC4AGCT1AG14GAAC1TGGNANCNGNCNTN-N-N-N-N-N-N-N-N-N-N-N-N2CTGAGAGT2CT1AGCT2CT-A-A-T17AG13GAGA9CA15GA3CT9AG11TC5GA17CA1GA3ANGN-N-C-A6-G-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2A-19-N-N-N-N-N-N2TACA1CG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CTTA5CA37AG30-N-N-N-N-N-N-N-N-N14TA8GA7AG4TC6GA9GA12AT7AG17CT59GA3CA7TC22AC4GA7TC5TCAT3GCTA6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT6CGTAGAGC1TG2TG2TC3CGAGTA8CA16GA3AG3GAAG10AC1CAAGTG9CA2AGAC15CA6AG23AG1AC3AG3AC18AG7AGGA4TA2AC18AG28GA4TC15AG2AG1AG11GA26AT2AG2GT2TA7AG7-A2-N-N-N-N-N-N3GCA-3GA1-N-N-N16GA2CT2GA3CA1AG14AG2GA10AGCTTGCAAGCA6GA1TC11ATAC2AG6TA4CT2CA13CT3CA9GA12ACCA1CA2GA21CNTNTNCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G4CA-T-G-A1CG21TC1-T4T-3AGCT2TC14GT1GA8AG10GA14GA7CA4CT23TC1AC6GCAT4GACA1GC1GACT1TGTG5CG3TCAC31GA5AG3-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G8TC2AG9TA1TG6-N-N-N12AG2GA13AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3-A-C-C-C-C-T-C-C-A-A-C-A5GA-G-G-G-A-C-C-C-C-T26AG4GA3CTCT1GA4AGGA1AGTG2AG5CT5TC6-A-C-T-A-G-A5CT3GC6GTTGAG5CG7CA3AG1AG2AT5GAGNANGN-N-N-N-N-N-N-N-N-N17GA11CT17CT3GT4CT5TC2TC36AC5TC7AG6-N-N-N8TC18AC31CT19CT5TA7-N-N-N-N-N-N33GA1GC6AGGA6AGGA3ACGC-N-N-N3AG2AG1AG6CAGA4-N-N-N3TC7TC8GA5GA14GA1AG10CAAT5GA18CA5CT5AG3AC5CG15
-MK115690.1,Ref.39_BF.BR.03.03BRRJ327.EU735536,0,9689,11027,174,1,164,10088,10260,1.48e-44,179,87.931,153,plus,8AC5TC7AG6-N-N-N8TC18AC31CT19CT5TA7-N-N-N-N-N-N12-T18GT1GA1G-7
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-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,6217,703,6539,1004,7217,0.0,6711,88.467,5500,plus,23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG10-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC2ACTCGA10AG14AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4
-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,3120,6544,9281,7303,10420,0.0,2502,79.295,2474,plus,14CT5TCAGAG1-A2GAGT2AT1G-4CA1-A-A-A1AG3AG2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG34-N-N-N23TC38GA5GTGA6AC10TA12AC2GA13-N-N-N19AG9GA11AG15TC14-N-N-N16ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GACACA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-A-G-T3-G-A-A3-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA6-N-N-N4GT6AGGA31TC2AT3AC8-N-N-N21TC1AG6GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-A2AG2CAGC1GACT1GA1AT1TC4CT26AG12GA35GA22GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GT46GC3GA16AG5-A-N-N-N-N-N-N-N-NGN1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA2-N-N-N-N-N-N9-N-N-N20CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT-N-N-N-N-N-N-N-N-N-N-N-N3TC5AN-N-G5GT22GT1GNGN-N-A-T10GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1ANAN-N-N-N-N-N-N-N-N-N-N16GC9GA19TA3AG1GC4CG1CA48TC9AG4-N-N-N14CT6GA5AC24GA25AGCT13-N-N-N-N-N-N8GA5TC1TA15GT8-T-A-A-G-A-T-A-G-A7-N-N-N3CA12AC1TA2-N-N-N12AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14
-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,764,8973,9614,5,755,1.99e-137,488,75.654,578,plus,14TC3-N-N-N5ACAG18CT6GA5AC19-N5GA12-N-N14-N-NCT21GA5TC1TA7-N8GT8-G-A-A-G-T-T-A-G-A3GA1-N-N-N4TCCA12AC1TA14AGCT11-N1GAGA4GT8AG1AG6AG3AGTA5AG40ACAT10-N4AT1AN-N3-A11TC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG6AG2GN10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N6TC23-N7-N9GC18GT2CT8ACGT50-N21-N9-N16TC1-N19TNTNGT1GNAG1C-T-C-T-A-G-C-A-3GAGN1G-C-G-A-C-11-N11-G-A4-T-N-N-N-T-T-A-G-T-C-A-N-G-T-G-T-G-G-N-A13-N-N14
-MK115030.1,Ref.B.NL.00.671_00T36.AY423387,0,9126,11027,9606,60,8848,830,10422,0.0,8449,81.845,7862,plus,9-N-N-NCA12-N-N15-A-A-G-A-A-G-A7AG15CG1-N-N-N-N6-N-N3-N-N-N-N-N11GT3-A-A-N-N-N-N-N-NTN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N36CG27TCAGCGCT21AG5GA27GA20CT2CT8GT6TA13CT2GA5TA46GA8AT13GATC12AG3CGAC7AG1TG21CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA17AGCG38AG7AG5TC6-N-N-N27CT73GA11AG11TG2GA35AC2CG23GA29CT36-N-N-N-N-N-N-N-N-NCA3CA24CA5AG17GA30GATC7TC9GA24GA2TC8CT15CT4GA11GC8TA30-N-N-N9GT4TC11GA2CT14AG15TC16AC14GA14CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGATTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G8GA5GA8TCTA3GA10AG1-N-N-N1AC30AG29GN22GN2GA1GN26-N-N-N-N-N-N-N-N-NGN12AN6-N24-N-N-N-N-N-N-N-N-N-N-N-N21CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA5CT1-N-N-N-N-N-N5AG7AC1GA1ACGA3CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC33AG12AG61GA3CT10TA11GA17AG13AT29CT8TC17CT2CT52GA3TC32GA6AG11GA5AC13GA6AT16GA8TC9GA1GA23TC27CA13GA5AT21CT13TC2CT2AG10GA21AG2TC26TC5CT11AG23CT4TC10GA7AGGA13CT71TC8GAGC64AG1AG6CT7AG6GA5GA9CT4GAGAGA7CT1CTAGCA30TC5TC51CGAT9CA6ACGN4AN31GATN13CT5CT19AG27CT15GA15AC18GA11GA28CTAG12TA20GA13GAGCGA2AG51GA2AG7GA1AGCT15TA14GA26CTCATC4GACG19-N-N-N15CT4TC8GA12AGTCGA44AG23AG20GA2AG9AG40AG2GA5AG14GA8GT8AG8GA3GA2TC2CA3TA17GA12CA20GA9TCCT1AGCA12GA17CA5GA60CT17AG1TC14CG47CT4AC9AG3AG8CT1GA21-N-N-N11AG60-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC38AG2GA59CT18GC16GA15AC10GA22TCAC18ACGC8CT3CT3AG1GA23AG20TC14TC32TA32TG14TC26CT2TC31GA3CT54CT7AG3-N-N-N3TA43AT26CT44TC11GA17GA3CA59-N-N15CA12CT8CT3TGTG3AGAG7CA1GA1GA4GT4CT17CTCAAC1AC6AGAG1CT22TC7AG-N-N-N-N-N-N2AT1GA3GA7AC45CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA14AG2GA13AC2-N5TC7CTTC4AG2GA20GA11AGCGCG4-N-N-N2TC3AG11TC19AG14GA-N-N-N7AC1AC9CTCT12TC4CT6-N-N-N11GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG15TN-N-C5CATC13AG14AG4TA28CAGA24CT51-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5T-5ATGA1AC-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC37TA7AG2AC17TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT42-N-N11CA5CT5GA11ATAC12-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC8-N-N-N-N-N-N1TC1GT7AC8-T-A6CA-T-N-N-N-N-N-N32AG14TC8AC29GA6AGATGA14AC2CA23CT1GA6GA3GC3CT3GA16CAAT5CT12GA10GA14TC18CG10GA12CT35-G-C-C3TA1AT1AC1CNTNANANANTNCNGNCNCNCNTNANANCNANANTNANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GCTC1GA5AT4-G-G-T-T-C-C3TA6-G3CT-T-T4AC1-G1GT1-G-C-A3AG1TA1AT2-G-T15GA8GAGCAC4GA1GA3GA1GAT-4AG1-G4CTAT6TG2CGTAAG10GA14GA1AT1GA4GTGAATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4GT1AT13CT17AG9-N-N-N12GC1GA16TA4GA25GA5AT8AG2CT8AG3GCAC5GA16-N-N-N26AG2AG5TC3CT1GA3CT1GA2CT20GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA10GC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA8GA6-N-N-N-N-N-N-N-N-N-N-N-N8GA9AC5GA1GAAGAC1GA1TA17AC9AGTG8AG4ATAT2TA1GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC15CT5GA2AT2GA5TC12GA50ANANTNANANTNANANTNANCNTNTNGNGNAN-N-N-N-N-N-N-N-N-N-N-N-G3GTTG1CA2AC2AC1TG11-A-C-A3TC7CT5CA30-N-N-N3TATGGA16GA21CTCGAC3GA8AC-N-N-N11TC2TC11GACT2GATC3AG8ATAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA20GA38CA8AG5AG3AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG2GA14GAGNGN-N-N-N-N2-G-C1TA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG48GA2AG20-N-N-N-N-N-N-N-N-N23GA20AG24TC22CT27TA1GA12AC16GA2GA20AG16AC6CT6AGTC8AGCTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3GC8AGCATG13AT9AG1AGGA18GAAGCTAT7TC1ACCTTC8CG1AC2AG5CA9CA13CA11AG4ACGA24GAAG3TA3CA1GT5AG35CT2GAAG4TG16CT1AG4GT8AG12CA22GC7TA7AG1CT-N-N-N-N-N-N1AC7-N-N-N19CTAC7GA20GA1AGCG4AGCG1ACGC7CA14CA9AT17TG9TC31CTGA1CT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AC2GC2GA2TC17GA7GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC15AG8GATC1TA9GCCT8TC16CG1CA22GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N7AGAGCA4TG5GA1GCGAG-C-1CA4CG-N-N-N-G-G12CGAG1AG5GA6ACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-13CATC9GC3CT10CT6GA10CA1TC13C-A-G-C-A-G-3CACT3AG3AC1GNTN-N-N-N-N-T-G2CT3CG2GA9CG11GNANGN-N-N-N-N-N-N-N-N-N35GA21CT1AG3AC34TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C38TCAC8GA5-N-N-N1GA2TA15CT-N-N-N6ACGA3CTGAATAG1AG2TAGA5AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA28GA11CA1GA11TC3
-MK115498.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9461,11027,6391,542,6495,830,7217,0.0,6748,87.764,5609,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-NANANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT10AG11-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-MK114856.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9477,11027,693,8845,9441,5,697,2.89e-129,461,76.768,532,plus,14TC1GC1-N-N-N4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN5AT24TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG11-GAN1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG6AG2-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG11-N-N-N6TC7AG3AG4CT1AG4-N7-N9GC21CT10AG30AG18AN1AG-G18-N9-N18-N19-N-N2-N6-N12-N2-G5
-MK114856.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9477,11027,237,9226,9433,10645,10881,5.38e-45,181,83.544,198,plus,5-N2AG3AG3CN1-T-N1AG4-N6-N9-N-N-N1GC10-N11CT2-N8AG1-N21-N7-N-N1AG12-N-N-N-N-N7AGAG3-N10-N7-N6-N13-N27-N-N-N-N-N17
-MK115009.1,Ref.B.NL.00.671_00T36.AY423387,0,9207,11027,9610,186,8984,830,10422,0.0,7732,79.188,7610,plus,9-N-N-NCA12-N-N15-A-A-G-A-A-G-A7AG15CG1-N-N-N-N6-N-N3-N-N-N-N-N11GT3-A-A-N-N-N-N-N-NTN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15TG20CG3AG12AG10TCAGCGCT9AGAG10AG5GA17AG9GA20CT2CT8GT6TA13CT2GA5TA2AG43GA8AT13GATC9CT2AG3CGAC7AG1TG21CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA8AG8AGCG1ACTA24AG10AG13TC6-N-N-N27CT8AG41AG1AG20GA11AG11TG2GA10AG24AC2CG22AG9AG20CT24AG3AG7-N-N-N-N-N-N-N-N-NCA28CA5AG14AGAG1GACT4CT24GATC7TC9GA4AG7AG10AG3TC8CT2AG12CT3AGGA11GC8TA10AG18-G-N-NAN9GT4TC11GA2CT14AG15TC16AC15AG1AG11CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGGTTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G7AGGA4AGGA8TCTA2AGGA10AG1-N-N-N1AC28AG1AG4CT5AG17AGGN5AG7AGAG6AGGN4GN2AG23ANANGNANGNANCNCNANGN1C-T-AG4-A5AN6-N1AG22-N-N-N-N-N-N-N-N-N-N-N-N3AG7AG9CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA17AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA4-C2-N-N-N-N-NCN5AG7AC1GA1AC4CA1AG5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC32AGAG12AG2AG16AGAGAGAG5AG2AG29GA3CT10TA11GA17AG10GA2AT12AG16CT6AG1TC17CT2CT33TC7AG3AG6GA3TC32GA6AG11GA5AC1AG9AGAGGA6AT8AG7GA8TC9GA25TC8AG1AG16CA13GA5AT10AGAG9CT2AG10TC2CT2AG32AG2TC2AG23TC5CT11AG23CT4TC10GA6AGAGGA3AG9CT15AG3AG4AG46TC8GAGC31AG15AG16AG1AG6CT7AG12GA9CT6GA3AG3CT1CTAGCA12GA12AG4TC5TC4AG3AGAG24AG16CGAT9CA6ACGN2AG1AN25AGAG4GATN6AG6CT5CT7AG11AG21AG5CT15GA15AC18GA40CTAG12TA20GA11AG1GAACGA2AG5AG44AGGA2AG7GA1AGCT3AG11TA14GA26CTCATC4GACG12AGAG5-N-N-N15CT4TC16AG1AG2AGTCGA9AG18AG11AGAG2AG23AG3CT3AG12GA2AG12AG20AG2AGAG12AGAG1GA5AG3AG9AGGA8GT6AG1AG8GA3GA2TC2CA3TAAG16GA4AG7CA20GA9TCCT1AGCA12GA17CA3AGAGGA60CT10AG6AG1TC10AGAG2CG12AG6AG27CT4AC1AG7AG1GA10CT5AG10AG6-N-N-N11AG16AG16AG26-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC6AG31AG21AG13AG21AG4CT18GC16GA15AC21AG11TCAC18ACGC8CT3CT3AG7AG10AG2AG3AG1AG16AG1TC14TC9AG8AG13TAAG27AG3TG14TC26CT2TC2TC28GA3CT54CT7AG3-N-N-N3TA18AG24AT26CT44TC11GA17GA3CA4AG6AG47-N-N11AG3CA12CT8CT3TGTG3AGAG7CA1GA1GA2AG1GT4CT17CTCAAC1AC6AGAG1CT22TC3AG3AG-N-N-N-N-N-N2AT1GA3GA7AC8AGAG32AG2CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA6AG7AG1AGGA12AGAC2-N5TC7CTTC4AG2GA20GA11AGCGCG4-N-N-N2TC3AG11TC19AG7AG5AGGA-N-N-N2AG6AC9CTCT12TC4CT6-N-N-N9AG1GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG3AG11TN-N-C5CATC9AG3AG14AG4TA28CAGA24CT7CG4AG30AG7-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5TAGT1CT3GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT8CT2GC37TA7AG2AC10AG6TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT9AG32-N-N5GA5CA1AG3CT2AG2GA8CA2AT12AG-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC5AGAG1-N-N-N-N-N-N1TCAGGT1AG5AC8-T-A2AGCA2CA-T-N-N-N-N-N-N4AG16AGAGAG8AG1AG12TC8AC29GA6AGATGA10AG3AC2CA23CT1GA6GA3GC3CT20CAAT5CT4AG7GA10GA14TC13AG4CG10GA12CT35-G-C-C3TA1AT1AC1CNTNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GC1CACA3CT1AT2AC1AGCG2GCTC1GA8CG5ATTGAG1TAACTA2ATAG1AC2A-A-G-9AGAT15GA8GAGCAC4GA1GA5GAT-4AG1-G4CTAT6TG2CGTAAG7AG2GA14GA1AT6AT1ATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4AT1AT13CT17AG9-N-N-N12AC1GA16TA4GA8AG16GA5AT8AG2CT3AG4AG3GCAC5GA16-N-N-N12AG13AG2AG5TC3CT1GA3CT4CT18AG1GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA9AGGC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA6AG8-N-N-N-N-N-N-N-N-N-N-N-N8GA4AG4AC6-G2AC2GA2TGA-15AC9AGTG8AG4ATAT2TA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC11AGAG2CT5GA2AT2GA5TC16AG44AG1ANANTNANANTNANGNTNANCNTNTNANGNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGTTG1CA2AC2AC1TGAG4AG5-A-C-A3TC7CT5CA30-N-N-N3TATGGA12AG3GA21CTCGAC1AG1GA8AC-N-N-N11TC2TC11GACT2GATC3AG6AG1GTAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA3AG5AG9AGGA7AG7AG22CA6AG1AG5AGAG2AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG1AGGA15-N-N-N-N-N-N1GCAG2TA1AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG6AG7AGAG19AG12GA2AG7AG12-N-N-N-N-N-N-N-N-N23GA20AG24TC15AGAG5CT16AG10TA14AC1AG15AG1GA4AGAGAG13AG16AC6CT6AGTC9CTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3AC6AG1AGCATG10AG2AT5AGAG2AG1AG19GAAGCTAT7TC1ACCTTC8CG1AC2AG5CA9CA13CA11AG4ACGA1AG11AGAG4AG4GAAG3TA3CA1GT1AG3AG1AG21AG6AG4CT2GAAG2AG1TG16CT1AG4GT13AG7CA1AG20GC7TA7AG1CT-N-N-N-N-N-N1AC3AG3-N-N-N15AG3CTAC6AGGA4AG2AG3AG8GA1AGCG4AGCG1ACGC7CA2AG11CA6AG2AT17TG9TC13AG12AG4CTGA1CT3AG5AG8AG6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AGAGAG2AGAG5AC2GC2GA2TC1AG2AG12GA4AG2GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC3AG9AGAGAG8GATC1TA9GCCT8TC16CG1CA21AGGAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N3AG3AGAGCA4TG5GA1-C-A-T-A3CGTGCNANAN2C-1AG10CGAG1AG1AG3GA1AG3AGACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-9AG3CATCAGAG3AGAG2GC3CT10CT2AG3GA10CA1TC13C-A-G-C-A-G-3CACT7AC1GNTN-N-N-N-N-T-G2CT3CG12CG2AG2AG1AG3GNANGN-N-N-N-N-N-N-N-N-N2AGAG31GA15AG5CT1AG3AC22AG11TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C3AG3AG30TCAC1AG6GA5-N-N-N1GA2TA1AG13CT-N-N-N6ACGA3CTGAATAG1AG2TAGA3AG1AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA30AG9CA1GA11TC3
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,6394,178,6131,830,7221,0.0,6752,87.739,5610,plus,9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N13-A-A-N-N-N-N-N-N-N-N-A11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24TA24ACAG27AG10GA57CT2CT5TG9AT4GA2AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG9-N-N-N17GA8GA4TC13ACGATC1CG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GT12CA31GA23GA20CT2TC3-N-N-N5GA2AG23GA95GA42GA13AG50AG10CG10-N-N-N-N-N-N-N-N-N1GA27CT32GA30TC9AG49GATCCT17AT2GA5TG26AG3-N-N-N11AG41AG2AT35GA2GA14AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGAC2TC40-N-N-N1CT35TC50GA28-N-N-N-N-N-N-N-N-N20-N20CA3-N-N-N-N-N-N-N-N-N-N-N-N15CT17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N3GA13TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGA6GA7TC2-N-N-N-N-N-N16GA1GA9GC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG40AG41CT97CTTC68CA6TC19TC20TC8AG12CA88AG8AG8GA95GA11AG41CT20GA6AG35AG11AG43TC85TC24GA38CT53AG11CTTC6AG7TC1GT11TC20CT8GT59CA5TC27CT7AG26TCGC13GA2AG19AGGA3GA7GA11GA4AC39GA2AG59GATA22GA50GA10CT7AG64GA12-N-N-N2CT4GA9AG8GA2AG11TA2CA11AG23CT14CT32AG5AG8TC2TA14TC23TC37GACT14GA6TA31AGCT1GA10GA6AT11AG39CT7AC18ACGAGA12AT39GA6CT2TG77CA8GA21-N-N-N2GT2GA16AG49-N-N-N17TC11-T-N-NCN8GA10CT37TC88GA8AG11CT2CT2CT17GA8GA3GA10AT8AC1CG10AG12AG18AG2GA13GT3CA71AG35CA93CA19GA6-N-N-N40AG4GA25AG2TC2TC135-N-N6CA32CTAG5AGAG6CTCAAG29AGTC35GA9-N-N-N-N-N-N65AG17CG3GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC30-N-N-N17GA12AG8GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT21GT2AG59AC9-N13CT5AG10GAAT25CTAT3-N-N-N2TC8GA2AG33AG5-N-N-N9TA31TC2-T-N-N15CT1AG16AG1CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33-N-N7TC34GA3CG10AT14AG2CT34GC37-N-N-N-N-N-N9CG3CA3AGGA18TCATCT5CT9GA7TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4T-3T-3TC-C-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG2AG23GACT4TA17GT8CA12AG11AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA1GA6TC15AC7TA2GA15-N-N16ANTNCNANANGNANGNGN1GATA11-G-T-G-G-A-G-A-T-G-G-G-G14TC12AG-N-N-N-N-N-N13AG4AG2GA4CACA1GA-N-N-N-N-N-N1GT35GAAG7AC37AGGA8CT55AG5AT1AG1GT6AG6GA16GA3AG10TA38TC14GA3CT18CG6TG2TC6AT1TG1GA4
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,3077,6162,8926,7345,10420,0.0,2414,78.648,2420,plus,5AG2GA1CA7AT12CG11AGGA1AG4AG2AC1AG6GTCAGT3CT11AC5TA2GA2GCAC7GA1AT2GT1ACAT1-C-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANTNANANCNANGNTNANGNTNANCNCN2AC4GA5TC2AG14CT9AG5CT3-N-N-N31TA21AG8GA13AC5GA5ACGA26-A-N-NGN19AG52-N-N-N3AG1GA10AT4AT4AG6AG6AC13TC4GCGAAC1GT1CTAG2CG5TATACT4TC26-G-A-A-T-C-C4ACAC1TG1TG19TGATCT4CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1TA3ANTNAN3GA1CT2-G-N-N-N-N-N-N-N-N-N-N-NAN2GA21-A-G-A1GC3TA28CGACCA5GA2AG5CT1-T-G3TACT2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCN1CA3A-12TGTCCA4GT16GA8AG26CT5TC9TA2TCCA15CT3ATCT3-T-N-N-N-N-N-N-N-N-N-N-N-N-N-NANANANTNGA5GT1TG3-A-C2-AGACGAG3TA3GA1TC3CG1-A-G3-G2GATC1ACTA5AC4AC22-N-N-N3CA8GAGA44-G-A-NANCN3AT20GC1TA14GT2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN2GTGATGGC1TATC5AGAT1TC4CT3TC15AG6AG3TC37GA16AG19AG3-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG5GA11-G-N-N-N-N-NAN3CA1GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT25CA20GC5AGGA9AT10-N-N-N-N-N-N-N-N-N1GA1GT19AG42TC25TC18GA23CA16AG2AGCA35AG14CGGC7GA2GNGNGNCNANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT3ATAC3AG2TAGC1CG6GAGA1AC3TC18AC1AG7GA20TC2AT8AGCA6AG2TATACA3AG28CA34GA5TA2CA1AT18AT69AG15CT11AG10TA7GA1TC-N-N-N-N-N-N9GN-N-N-C27GA17AG2GA7GAGT17TC3AG20AG35CA17GA1TCCG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N38GA5CT29CT11CTAG7TC4TC9AG12AG1AT6AG2TG5AG2AGTC1GT8TA3TG12GA17AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N28AGGT1GN-N-N-A8ACAC1GA1AT2GA15CNGNANGNCNTNCNANGNCNCNANANCNANGNCNANGNANTNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA17AC14TC8CA1TC8GC14TC7AC33TGGNANGN-N-N-N-N-N-N-N-N-N16GC21CA8TC2AG6CG7GT39GA2TC9AG3GA-N-N-N41TC10GA25AG10CA3-N-N-N-N-N-N16TA13CG11CA2GA11-N-N-N3GA12AC4CN-N-N-T11CG6AT23AG7CT3TA21CA12AG11ACAT11TA2
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,355,8609,8947,5,359,6.92e-95,346,86.761,308,plus,11GA2TC3-N-N-N5ACAG3GA41TC5-N5GA12-N-N14-N-N10CA19TA7-N6CG10TGCA2GT7GA1-N-N-N4TCGA12AC4CT11CG6AT5-N1GA16AG7CT3TA21CA24ACAT10TN1-A2AT1AN-N3-A11AC3
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,187,8958,9136,449,635,1.31e-53,209,92.513,173,plus,11-N-NGNAGAG21CT6-N7-N9GC18-T56TG6-N21-N9-N9
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-MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,11027,6391,619,6571,830,7217,0.0,6745,87.748,5608,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-NANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC4AG8GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-MK115065.1,Ref.B.NL.00.671_00T36.AY423387,0,9214,11027,9433,215,8893,1002,10422,0.0,8430,82.254,7759,plus,36CG27TCAGCGCT21AG5GA27GA20CT2CT8GT6TA13CT2GA5TA46GA8AT13GATC9CT2AG3CG8AG1TG14AG6CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA17AGCG2TA35AG13TC6-N-N-N27CT73GA11AG10CATG2GA35AC2CG23GA29CT36-N-N-N-N-N-N-N-N-NCA25TA2CA5AG17GA30GATC7TC9GA24GA2TC8CT15CT4GA11GC8TA30-N-N-N9GT4TC11GA2CT14AG15TC16AC14GA14CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGATTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G8GA5GA8TCTA3GA12-N-N-N1AC30AG4CT5AG18GN22GN2GA1GN26-N-N-N-N-N-N-N-N-NGN12AN6-N24-N-N-N-N-N-N-N-N-N-N-N-N3AG17CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA5CT1-N-N-N-N-N-N5AG7AC1GA1ACGA3CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC33AG12AG65CT10TA11GA17AG13AT29CT8TC17CT2CT52GA3TC32GA6AG11GA5AC13GA6AT16GA8TC9GA25TC27CA13GA5AT21CT13TC2CT2AG32AG2TC26TC5CT11AG23CT4TC10GA7AGGA13CT71TC8GAGC55TC8AG1AG6CT7AG6GA5GA9CT4GAGAGA7CT1CTAGCA30TC5TC51CGAT9CA6ACGN4AN2AG28GATN13CT2AG2CT19AG27CT15GA15AC18GA11GA28CTAG12TA20GA13GAGCGA2AG51GA2AG7GA1AGCT15TA14GA26CTCATC4GACG19-N-N-N15CT4TC8GA12AGTCGA44AG23AG20GA2AG50AG2GA5AG14GA8GT8AG8GA3GA2TC2CA3TA17GA12CA2TA17GA9TCCT1AGCA12GA17CA5GA60CT17AG1TC14CG47CT4GC9AG12CT1GA21-N-N-N11AG60-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC38AG2GA59CT18GC16GA15AC10GA22TCAC18ACGC8CT3CT3AG1GA23AG20TC14TC65TG14TC26CT2TC31GA3CT54CT7AG3-N-N-N3TA43AT26CT44TC11GA17GA3CA59-N-N15CA12CT8CT3TGTG3AGAG7CA1GA1GA4GT4CT17CTCAAC1AC6AGAG1CT22TC7AG-N-N-N-N-N-N2AT1GA3GA7AC45CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA14AG2GA13AC2-N5TC7CTTC4AG23GA11AGCGCG4-N-N-N2TC3AG11TC19AG14GA-N-N-N9AC9CTCT12TC4CT6-N-N-N11GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG15TN-N-C5CATC13AG14AG4TA28CAGA24CT51-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5TAGT1CT3GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC37TA7AG2AC17TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT42-N-N11CA5CT5GA2GA8AT13-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC8-N-N-N-N-N-N1TC1GT7AC8-T-A2AGCA2CA-T-N-N-N-N-N-N32AG14TC8AC29GA6AGATGA14AC2CA23CT1GA6GA3GC3CT3GA16CAAT5CT12GA10GA14TC18CG10GA12CT35-G-C-C3TA1AT1AC1CNTNANANANTNCNGNCNCNCNTNANANCNANANTNANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GCTC1GA5AT4-G-G-T-T-C-C3TA6-G3CT-T-T4AC1-G1GT1-G-C-A3AG1TA1AT2-G-T15GA8GAGCAC4GA1GA3GA1GAT-4AG1-G4CTAT6TG2CGTAAG10GA14GA1AT1GA4GTGAATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4GT1AT13CT17AG9-N-N-N12GC1GA16TA4GA25GA5AT8AG2CT8AG3GCAC5GA16-N-N-N26AG2AG5TC3CT1GA3CT1GA2CT20GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA10GC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA15-N-N-N-N-N-N-N-N-N-N-N-N8GA9AC5GA1GAAGAC1GA1TA17AC9AGTG8AG4ATAT2TA1GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC15CT5GA2AT2GA5TC12GA50ANANTNANANTNANGNTNANCNTNTNGNGNAN-N-N-N-N-N-N-N-N-N-N-N-G3GTTG1CA2ACCT1AC1TG11-A-C-A3TC7CT5CA30-N-N-N3TATGGA16GA21CTCGAC3GA8AC-N-N-N11TC2TC11GACT2GATC3AG8GTAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA20GA38CA8AG5AG3AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG2GA15GNGN-N-N-N-N2-G-C1TA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG48GA2AG20-N-N-N-N-N-N-N-N-N23GA20AG24TC22CT27TA1GA12AC16GA2GA20AG16AC6CT6AGTC9CTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3GC8AGCATG13AT9AG1AGGA18GAAGCTAT7TC1ACCT9CG1AC2AG5CA9CA13CA11AG4ACGA24GAAG3TA3CA1GT5AG35CT2GAAG4TG16CT1AG4GT21CA22GC7TA7AG1CT-N-N-N-N-N-N1AC7-N-N-N19CTAC7GA20GA1AGCG4AGCG1ACGC7CA14CA9AT17TG9TC31CTGA1CT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AC2GC2GA2TC17GA7GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC15AG8GATC1TA9GCCT8TC16CG1CA22GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N7AGAGCA4TG5GA1GCGAG-C-1CA4CG-N-N-N-G-G10AG1CGAG1AG5GA6ACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-13CATC9GC3CT10CT6GA10CA1TC13C-A-G-C-A-G-3CACT7AC1GNTN-N-N-N-N-T-G2CT3CG2GA9CG11GNANGN-N-N-N-N-N-N-N-N-N35GA21CT1AG3AC34TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C38TCAC8GA5-N-N-N1GA2TA15CT-N-N-N6ACGA3CTGAAT2AG2TAGA5AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA28GA11CA1GA11TC3
-MK115464.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9663,11027,6392,680,6633,830,7221,0.0,6452,86.076,5502,plus,9-N-N-N13-N-N17-N-N-N-N-N-N21AG2-N-N-N-N6-N-N3-N-N-N-N-N13-A-A-N-N-N-N-N-N-N-N-A11-N-N-NAG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AGAG13TA24ACAG27AG10GA57CT2CT5TG9AT7AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG9-N-N-N17GA8GA4TC8AC4ACGATC1CG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GT12CA31GA19AG3GA20CT2TC3-N-N-N5GA2AG23GA95GA10AGAG30GA75CG2AG7-N-N-N-N-N-N-N-N-N1GA27CT20AG11GA30TC9AG49GATCCT17AT8TG10AG15AG2-G-N-NAN11AG32AGAG7AG2AT35GA17AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGAC2TC40-N-N-N1CT28AG6TC79-N-N-N-N-N-N-N-N-N20-N1AG18CA3-N-N-N-N-N-N-N-N-N-N-N-NAG9AG4CT17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC1AG3-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGA6GA7TC2-N-N-N-N-N-N16GA1GA5AG3GC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG40AG5GA35CT17AG16AG17AGAG11CT30ACCTTC68CA6TC14AG4TC20TC8AG12CA7AG8AG3AG67AG8AG3AGAGAG2GA12AG61AG19AGGA11AG16AGAG12AG10CT6AG13GA6AG10AG5AG18AG11AG9AG33TC3AG9AG35AG4AG30TC24GA32AG5CT9AG17AG25AG11CTTC6AG2AG1AG2TC1GT11TC20CT8GT5AGAG52CA5TC27CT4AGAG1AG11AG14TCGC3AG9GA2AG19AG4GA7GA11GA4AC38AG3AG22AG36GATA11AG10GA50GA10CT3AG3AG64GA5AG6-N-N-N2CT4GA9AG8GA2AG7AGAG2TA2CA1AG9AG16AG6CT4AGAG8CT25AG6AG5AG5GA2TC2TA14TC12AG10TC1AGAG12AG21GACT14GA6TA31AGCT1GA10GA6AT11AG39CT2AG4AC18AC1GA12AT46CT2TG4AG16AG5AG2AG32AG13CA12AG17-N-N-N2AT2GA3AG12AG5AGAG42-N-N-N3AG13TC11-T-N-NCN9AGAG8CT4AG20AG11TC34AG21AG31GA8AG11CT2CT2CT17GA1AG6GA3GA10AT8AC1CG10AG12AG11AG2AG3AGAGAGGA13GT3CA25AG45AG35CA93CA19GA6-N-N-N40AG4GA25AG2TC2TC79AG55-N-N6CA32CTAG5AGAG6CTCAAGAG28AGTC35GA9-N-N-N-N-N-N25AG33AG5AG19AG1GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC30-N-N-N17GA12AG8GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT21GT2AG51AG7AC9-N13CT5AG10GAAT25CTAT3-N-N-N2TC11AG22AG10AG5-N-N-N2AG1GA4TA31TC2-T-N-N10AG4CT1AG16AG1CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21AG11-N-N7TC34GA3CG10AT14AG2CT25CT8GC37-N-N-N-N-N-N9CG3CA3AGGA18TCATCT5CT9GA7TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2TCACTA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG2AG23GACT4TA15AG1GT8CA12AG11AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA1GA6TC15AC7TA1AGGA15-N-N16ANTNCNANANGNANGNGN1GATA8TC4AG5AG-G-G-G-G-T-G-G-A-G-A-T-G5TC10AG1AG-N-N-N-N-N-N13AG4AG2GA4CACA1GA-N-N-N-N-N-N1GT19AGAG14GAAG7AC37AGGA8CT11AG43AG5AT1AG1AT6AG6GA16GA3AG10TA28AG9TC14GA3CT18CG6TG2TC6AT1TG1GA4
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GCCTAC2GC2GA5GT1AG3TC5GA7AG10AC7TG5ACGA10CT2CT23AGAG1GA7AGGA3AT6TCAT2AG5AT1GCCTTGTG7AG2CA12CG1CA16AG4AGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N9GN-N-A2AG2TA7TG5GA3GTCATG2GTGA-N-N-N1CT1AG8GACACT4AGAG8GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1GA1TCACGCGT6A-4GC1C-A-G-A-G-4CT4AGCATAAGAG3AGAG6CTAC13AG3AG9CA1TC11TC6GA3CACT3GC4TCGA1TG5CG2AG9CG4AT2AGAG2GNANGN-N-N-N-N-N-N-N-N-N5TC2TC14GA2AG2TC5GA14AG5TCCT1AC3AC2AG2CTAT27TA11CT4AGAG1GA4-N-N-N5CG11GA3CG1CT2CTAC10CA11CT18AG7AG5AG1TA4CT2TNGNTN-N-N-N-A-C-C3AG1AG21GA4TC5TGAG8GA5-N-N-N1GA2TA16-N-N-N3TC2ACGA4GAATAG1AG2TAGA3AG4AG2AG2CT3CG10AGTC2CGAT5GA9CT1GA8TA3TG5GA11GA11TC1AT1-N-N-N-N-N-N-N-N-N12
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-MK115576.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9266,11027,6379,357,6300,842,7217,0.0,6739,87.772,5599,plus,8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-NANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC4AG8GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,7211,18,6691,5,7212,0.0,7482,87.408,6303,plus,18-N-N-N3CA1ACAG9GT15GA4TC2TC8TC1TA6-N5GA1GC1TG8-N-N14-N-N30TA4TC2-N8GT8TG3GT7GA1-N-N-N4TCGA10TC1AC1TA14AG6AT5-N1GA5GT44GA7GA4GA23-N4AT1-N-N3GA12CG1-G-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNANANGNANANCNTNGNCNTNGNANCNANANCNGNANGN3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN30-N7-N9GC36AC42GA2-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N7-G1TG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N-N6TC6-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N1CT13-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC97CT3AG14GT20TC8TC7GA28AG16TG35GA19CT5GC18-N-N-N8CT8GA27AC6GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTNTNANGNANCNANCNANCNANGNGNANANANCNANGNCNANGNCNCNANGN23AG6CA1TC81-N-N-N8AG50TC11TC75CG1AG20CT76CG10-N-N-N-N-N-N-N-N-N1GA27CT41GA8TC93AT38-N-N-N32CT20AG41GA8AC5AG27-N-N-N-N-N-N-N-N-N2CA12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGGC1GA16GA11AG12-N-N-NGACT27GA5TC1TC5AG73-N-N-N-N-N-N-N-N-N20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG20CT11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-NANCNCN8TG8TC2TG2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N6AG8AG14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA9AGAG46GA26GA23CA4AG3AG73CT117TC8AG101AG14AG119GA69TC38AG37CT86TC22AT5CA2GA9AC2GA26AG29AG6GA13AG19AG7TC4TC2CA17AG26GT48AG1CA32AGCT7AG5AG32GA4AG21GA24GA4GA18TC19GA26GA51GC4AC10TA52GACT55GA8GA19-G-N-NAN1TC11GA3AG77CT2CT14AG47TC29AG6ATAT22GA1CT21TA10TC33CT19AG35CT5GA24AC21GA12AG5GA20CT59TC21TC19GT9-N-N-N72-N-N-N26GA3-N-N-N20AG8GA27TC26AG49CT11GA20CT5CT41AT21AG2AGAC8AG21GA17CA203CA5CT6CT11-N-N-N4TC40GA28TC26TA111-N-N15CA30AG9AG23TA7ACAC8AG27GA1AG4-N-N-N-N-N-N6CT61GA50CA26CT8TC11AC14TG3AT19TC30-N-N-N17GA33-N-N-N-N-N-N-N-N-N-N-N-N4GT9CT13AC3GA2AG5AG47TC9-N5TC24GA27AT3-N-N-N6AG11TC19AG14GA-N-N-N33TC7TC2-T-N-N17AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33-N-N6GA34GAGA13CA3TC11AG2CT25CT8GC37-N-N-N-N-N-N6CA6CA3AGGA11GC6GC1CT5CT23-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7TA2AC2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG14CT11GACT4CA26CA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA24AC3GT22-N-N5AG5GA2GA1ANTNCNANGNGNANANGN2TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT6TC1TA10AG-N-N-N-N-N-N16AG10CA2CNANAN-N-N-N8TC29AG7AC37AGGA66GA5AGAGAT21TC6GA5AG22AG27TC16GA5TC13CG1CT4TG6AG2
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,3128,6686,9495,7303,10420,0.0,2573,80.083,2505,plus,10CA3GT5TC2-G-A-G2-T-G3CA1-G-G1CGCA2-G-GTA2AG2GA15TA3CT1GAAGAC3GAAG8AG4AGAT1-C5G-9CT8GA11GA4CA6GA1GT4AC2-C-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNANANTNANANGNANGNTNANANTNANANTNANTNTN5T-T-C-2GA3AG1TC6CT11TC8AG9-N-N-N62GA6GA6ACAG14GA23-A-N-NGN14TA53CA3-N-N-N10AG4AGGT10AG28AG2TCGAAC1AT5AG40TA2AC1CG3-C-C-A-G-A-G19TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1CA3ANTNAN3GA1CT2-G-N-N-N-N-N-N-N-N-N-N-NAN20CTTACG9CA4CAAT21GAAGAC6GA2AG9AGGAGA1AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG1CACA20GAGA6TC16AG30CA19ATATGTGA1GTANCNTNANANTNGNGNGNANTNTNTNGNGNANCNTNCA3TC1GT1A-4C-A-1AC3T-2T-1CG1ACCATA2CA5AG2TG2T-5TC2TA5AC4AC3TC1AG5GAGA9-N-N-N3TA8GA33AGAT11-A-N-NCN4TC6CT18GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCN4AG2CAGC2CT1GA1AT18TG9AT76GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8GA8-A-G-T-G-N-N-N-N-N-N1AGCA2TA2-A-N-N-N-N-N-N-N-N-N-N-N-N-NGNAN3CT46GC3GA23-N-N-N-N-N-N-N-N-N1TA21AG20AG66GA24GA45CT9AG14AG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15AC1AG9AC1TC1TC18AC9GA20TC2AT5CA13GA14AG6AC21CA25GA10CT18AT14AG32AG37CT14CT4TC5CT4GA1-C-N-N-N-N-NTN9-N-N-N20CA4GA31GAGT2CG14TC3AG6TA6TA3CT57GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14TC8CTGT6GA9AG8CT23CT11CT45AG2TG5AG18TG3TC7CG25GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N12AG13-G-T-GAT1CNTNANTA11GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNANGNCNTNGNANGNCNCNANGCCG3AT15GA30GA3CT24CG2AG37AG9-N-N-N-N-N-N-N-N-N-N-N-N16GC33AG2GA61CA2AG4-N-N-N5GT15GA4TC2TC8TC1TA11GA1GC1TG21AG14-N-N-N-N-N-N16TA4TC10GT12GA11-N-N-N3GA10TC1AC1TA2-N-N-N12AG6AT12GT44GA7GA32
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,575,9178,9686,5,579,8.49e-120,429,78.609,452,plus,18-N-N-N3CA1ACAG9GT15GA4TC2TC8TC1TA6-N5GA1GC1TG8-N-N14-N-N30TA4TC2-N8GT8TG3GT7GA1-N-N-N4TCGA10TC1AC1TA14AG6AT5-N1GA5GT44GA7GA4GA23-N4AT1-N-N3GA12CG1CGANANGNANANCNTNGNCNTNGNANCNANANCNGNANGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N30-N7-N9GC36AC31
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,342,9,335,10079,10420,7.18e-98,356,87.427,299,plus,3TG2CGTA22CA2AG4-N-N-N5GT15GA4TC2TC8TC1TA11GA1GC1TG21AG14-N-N-N-N-N-N16TA4TC10GT12GA11-N-N-N3GA10TC1AC1TA2-N-N-N12AG6AT12GT44GA7GA32
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,286,418,671,10644,10929,8.97e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N2AC18-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-OQ092463,Ref.B.NL.00.671_00T36.AY423387,0,9605,11027,9868,516,9449,569,10422,0.0,9083,83.218,8212,plus,22AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NAN7-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG9-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G6-T-A-A-A-A-A-N-N-N-N-N-NAN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA34GA29AG33GA8GA2GA20GT5AG6AG17TC3AG13TG36AT31CGAC2AG6TG26TA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC2AG12CA7AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNCNANGNCNCNANGN1CT6AG20CTAC4GA71TC6-N-N-N113AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG18CT16GA31GA16TC19CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG11CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC1AG23TCTACT2GA5GA4AG1-N-N-N1AC15CT17TC5TC1AG18AN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N6AG2CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N5AG9GAGATC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG20TC29CA3AGCA78TCGA7CTTA11GA58AG5AGAC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG17GA17TC73TC33CT71TC74AG16AG6TA3TC11CT4GA12AGCA30TC17AT42TC10GA3ACGNTC3AN32TN22CT16AG27CT2GA12GA14AGGC15GA2GA11GA2AG59GATA13GA56GA2AG7GA1AG4AG11TA11GA3CT23AG1CT27-N-N-N8GA6CT12GA12CAAG46AG23AG20GA2AG5TC32TG8CT5GA5AG24AG7AG12GA2TC2CA3CATG2TC47GA5GA3TC64AG17TC1AG12AG17CA5AC14AG47CT3GA47-N-N-N2TA2CA26GA39-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG2GA11CT12GA31GA29GA8GA15AC30CA3AC18ACGC16AG16CT92CT17TG14TC25ATCT34GA3CT18GA43AG3-N-N-N9CA121GA17GA63-N-N6GA21CT12TGTG3AG10GAGAGA4GT6AGGA11CA4TC9AG14TA17TG-N-N-N-N-N-N2GT5GA47CT29-G-G4G-A-8GC17GA22CGGT6CT23CT24AT7TC5TG5TA18-N-N-N8AG25CT16-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT2CT6CGCG4-N-N-N5CTAG7GA17AT5AG15-N-N-N9AC3CT31-N-N-N11GA23CT1TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG6AG8TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA3AC3AG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT25AGTC22TA1CT5AGCT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG8CT3AT38-N-N5GA2CT2GA23AT5T-G-T-8-N-N-N-N-N-N-N-N-N-N-N-N4CTGC12-N-N-N-N-N-N1TC3AG23AT-N-N-N-N-N-N47TC8AC4AG23GATA23TC26CT12GC7GA1GA12GA8CT12GA25TC18CG10GA8AG26GA9AG2TGACTC4ATCT2CTANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT4GT4CTCT2CTCGCG1ATGCTC1CACT1CA1GACA5GACTGTGT4ACGA5GCG-G-2G-9AGAT25GC1CA3GA1GA6TGGA4AG5AT6CG2TGTAAG2GA2CT26AG1ATCA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GT8GA6CT27-N-N-N12GC1GA21GA4AG20GA5CTAG10CT6TA1AG10CA13AG2-N-N-N26AG8TC3CT31GTAN-N-N-G14GA8TA8GA1TC17TG8TA13CA5TC32CA3GA-N-N-N-N-N-N10AG8TA7-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA8TG2AGAG3GA9CTAT2TA1GAGA4ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG8CTACCA14CT13CT5AG10GA26TA2AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1AGGC1TA2TG4GT1AG1-A-C-T-A-C-A2GATC5GA1CT5CA20GA9-N-N-N3CATGGA39AGGC5TACA4AGAC-N-N-N11TC15AT7AG8GTAGAGATANANTNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G5GA3CT1CG9TC2CT7AG7AG6AGGA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N56AGAG20-N-N-N-N-N-N-N-N-N29GA39TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AT7AT11TG17AG5AG23CT2GA9TC10AC5AG2CA19TA11AC3AG4AC25GAAG9GT41CT2GA5TG15GACT3GA10CT13CA16AG2GA2TC10CT6CT-N-N-N-N-N-N9-N-N-N11AC10GA28AG7AG11CT14TC69AGCT25GN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A11CGTC6GA2TC17GA7GT11AG1AGAG7AG4CT3CT7TC1CT3CT11TC11CT3AG8GATC1TA11GTGTGT5TCTA5AC28GA5GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9TA12ACGA2GATG1TG1-N-N-N1TG12TGAG1AG12ACGA1CNGNANGNCNTNGNANGNCNCNANGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C-G3AT14TC9GC3CT4AC5CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N17GA29TC4CG4GT1AG42TC2AG10GA6-N-N-N54CG1GT23AC12-N-N-N-N-N-N1CT24GA8GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092463,Ref.B.NL.00.671_00T36.AY423387,0,9605,11027,335,38,357,10088,10422,1.33e-102,372,89.851,301,plus,29-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA20GA5AG4GA9TC5GA24CA1GA15
-OQ092465,Ref.B.NL.00.671_00T36.AY423387,0,9659,11027,9870,546,9503,569,10422,0.0,9103,83.333,8225,plus,22AG2-N21-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NCN7-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG17-N-N-N-N6-N-N3-N-N-N-N-N1AT12-A-A-A-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA26GA26AG10AG33GA2AG8GA2TC17GT5AG6AG17TC3AG13TG36AT31CGAC1CAAG6TG26TA2GA11GA3-N-N-N15ACAG2TC10-C-A4-G-C-A-G-A-A-G5AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CT6AG26GA71TC6-N-N-N53CT59AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG35GA8TC22GA16TC19CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG8CT2CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC25TCTACT2GA1GA8AG1-N-N-N17CT17TC5TC1AG18AN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N9CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N2CA15CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG50CA3AGCA78TCGA7CTTA11GA13TA50AGAC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG35TC73TC33CT71TC74AG16AG6TA3TC11CT4GA12AGCA30TC17GT42TC14ACGNTC3AN4TC27TN22CT11GA4AG11GA8AG6CT2GA12GA14AGGC18GA11GA2AG59GATA73AG7GA1AG4AG11TA14GACT23AG1CT27-N-N-N8GA6CT12GA12CAAG91GA2AG26TC11TG8CT5GA5AG24AG1TC5AG12GA2TC2CA3CATG5CA44GA5GA3TC46CT17AG17TC1AG12AG17CA2AG2AC14AG47CT3GA47-N-N-N2TA2TA66-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG2GA11CT12GA61GA8GA15AC34AC17TCGCGC16AG49AT59CT17TG14TC25ATCT2AC31GA3CT18GA43AG3-N-N-N9CA121GA17GA63-N-N6GA21CT12TGTG3AGAG9GAGAGA4AT6AGGA11CA4TC1AC6AGAG14TA17TG-N-N-N-N-N-N2AT5GA78AG12GC17GA11GA10CG7CT48AT7TC5TG5TA18-N-N-N30AG3CT1CT14-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT9CGCG4-N-N-N2AC2CTAG7GA17AT5AG15-N-N-N9AC35-N-N-N11GA23CTCATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG15TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA3AC3AG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT23TC3GA21TA1CT5AGCT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG8CT3AT16GA21-N-N5GA2CT2GA23AT5T-G-T-8-N-N-N-N-N-N-N-N-N-N-N-N4CTGC12-N-N-N-N-N-N1TC3AG11CT11AT-N-N-N-N-N-N47TC8AC28GATA17GT5TC26CT12GC7GA1GA12GA8CT12GA25TC18CG4TC14AG26GA9AG2TGACTC4ATCT3GNGNTNGNCNCNANANTNANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT6CA2CTCT1C-C-C-2AG2AT3CA1GATA2GA3CTGA1-T-T-T4ACGA5GCG-G-2G-9AGAT25GC1CA3GA1GA6TGGA4AG5AT6CG2TGTAAG2GA2CT22AGCA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2-T-T-A-T-A-T8GA6CT27-N-N-N6AT5GC1GA21GA4AG20GA5CTAG6CA3CT6TA1AG10CA16-N-N-N26AG8TC3CT31GTAN-N-N-G14GA8TA8GA1TC4AC12TG5TGAG15CA5TC32CA3GA-N-N-N-N-N-N10AG8TA7-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA1GC3GA2TG2AGAG3GA9CTAT2TA1GAGA4ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG8CTACCA14CT13CT5AG10GA26TA2AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1AGGC1TAAC1TG4GT3G-1ACGTGAGCTACG2AC3TAGT1CG-T5CA20GA9-N-N-N3CATGGA38CTAGGC5TACA4AGAC-N-N-N11TC11AG11AG9AGAGCTGNANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G1CT4CA2CACTGAAG3TC4CT3CT7TG7AG6AGGA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANTN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N56AGAG20-N-N-N-N-N-N-N-N-N29GA39TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6ATAC4AGCAAT11TG17AG5AG1AG21CT11CTTC10AC5AG2CA19TA11AC3AG4AC25GAAG9GT41CT2GA5TG15GACT3GA10CT13CA16AG2GA2TC17CT-N-N-N-N-N-N9-N-N-N11AC13GA25AG7AG11CT14TC69AGCT25GN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A11CGTC6GA2TC17GA7GT11AG1AGAG7AG4CT3CT7TC1CT3CT11TC15AG8GATC1TA10ATGTGTGT5TCTA34GA5GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6AN-N-G8CA12ACGA2GATG1TG1-N-N-N1TG10AGACAGAG1AG12ACGA1CNGNANGNCNTNGNANGNCNCNANGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C-G3AT2AG11TC9GC3CT10CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N17GA29TC4CG4GT1AG45AG10GA6-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092465,Ref.B.NL.00.671_00T36.AY423387,0,9659,11027,337,66,387,10086,10422,5.07e-100,363,88.724,299,plus,13AG10GA6-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,7208,1,6597,5,7212,0.0,7146,85.752,6181,plus,14TC3-N-N-N5ACAG3GA21GA1TCCT16TCCT4-N5GA12-N-N14-N-N10CA5TC13TA7-N17TGCA2GT7GA1-N-N-N4TCGACA11AC16AG12-N1GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA28-N2-C2ACCNAN3-A10GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTC2TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N-G5TC4TC18-N7-N8ATGC40TC15AT20CT4-N2AG1GA16-N9-N18-N19-N-N-T1TN6-N12-N14-C-C2-NTNGN5TC1-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N2TC5TGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N16-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G7TA2-N-N-N-N-N-N-NAN12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N48CTACAG43CA1GACT28AG5GA5TC11CT17GA2GA17AG2GA2AG5GA2CAGT1TC25AG4CT3TA1CA33AG7GA1GA11AG11GC18-N-N-N2GC14GA14CA12AC1TC1AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N32GC5AG15CG2CA35AG7TG11-C-N-NTN8AG12AT37TC87TG1AG11GT9GA4GA9CA1AGCA4GA34AC9GA7CG10-N-N-N-N-N-N-N-N-NCA11GA16CT15CA1TC29CT5CTGATC17AG60TC5GA11TG30-N-N-N5GA29GA8AG8AG6TC41AG7AG27-N-N-N-N-N-N-N-N-N6GA5CT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GC27AG12-N-N-NCACT1AG13CT11GA5TC1TCTA2TC1AG23GA49-N-N-N-N-N-N-N-N-N20-N7GA11CTGA3-N-N-N-N-N-N-N-N-N-N-N-N3GA14CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN6GA9TC1-N-N-N-N-N-N6AG1CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG40AG26CT20TA13AG11AG6GA95GA50AG5CT32AG40GA43AGCT15AG14AG5CT36AG16GA5TCGA3AC54TC29TC2TA69AG1GA26AC8CT1CT27CT14GT53TC2GA35TC20AG8GA27GA13AG14AG4AG7TC67CT24TG28TC23AG8CT23AG2CT11GACT16GA23GAGA12CA30GA50TC12CA51AT21GA14AG3AG14AG32GA1TC27-N-N-N15TC1AG24GA9TC30AG11CT21CT13GA2AG14GA11TC23TC5AG30GA1CT1AG19CA7GT24CT11CT19AG66AC1GA11AGCT6GA24GA14CT53GA57-N-N-N2AT44CT15AG8-N-N-N2GA14TC5CT6-N-N-N3TC40TA11GA15CT2AG8AG61GA8AG11CT5CT2GA38AT21AG2AGAC1GATC5AG3TC17GA5AG11CA25AG4AG55AT36GA56AG28CT18-N-N-N45GA28TC77TC2CT57-N-N15GA14TC6CT2AG1AT3AG9AG1AGAGTA5GT21ACTC43-N-N-N-N-N-N8AG25TA52GA3GA9AC17CA29TC5TC11GC14TG13GATCGA7TC30CN-N-N-A16GA12AG20-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT23GC50AG9TC9GN2-A7AG11AG5AG1GA27AT3-N-N-N2TC5AC2GA2AG2GA14AT21-N-N-N41TC2-T-N-N12AG21AG3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TG15GA6TG8-N-N6CA35GA17TC14CT28AC5GC37-N-N-N-N-N-N12TCCA3AGGAGA4GC12TC7CT23-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC2GA4TA2GCAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT13CT11GA2CA22TC6CA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15AT2GA1GT6AC3GT15TC5AC-N-N14GA1ANTNCNANGNGNANGNGN2TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT8TA11-N-N-N-N-N-N2AG17CT5GA2CA-N-N-N-N-N-N17CT20AG15TC19CT64GA19AGAT15GT5TC12AG20CG23GC10AG31CG6TG6AG2
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,3103,6609,9390,7331,10418,0.0,2323,77.345,2400,plus,2GA5CG1-G1CA2AG3AG21GA3AGTC4AGAC3GA8AGAT10CTGA4CT17GA2GA11GA6GC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNANGNGNANCNTNANANTNANCNCN7GA5TC12TC14AG9-N-N-N62GA3GAGAATGA4AGGAAC17TC5GC15-A-N-NCN17CT21TC7GA19GA4-N-N-N10AG5ATAC3AT5AG6TC21AG2TCGAAC1AT5TGCA18TC1GA14GA3CA2AC1AG3-C-C-A-G-A-GGA14CA3TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA5ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN2GAAC7GT4TA1CA1GT1AG2AGGAAG2GA1CA4GA1GA9CA1ACGA8AGAC6CAAGCAAG1GA6-G-G-A-A-A-TCA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGAGA1CA5GACTAC3GA22TA6AGCT2TC5CG30CT2CTAT2TA2GCCAGATC6GACTGA1GT2CT3-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNGNTN1CG1GA6CG2AC2CATAAGCGTG1GCGAGAGA3TC1TC2CA2-G-A-A2AG3ACTA5AC4AC16TA5-N-N-N4GTAG6GA34AT3GC8-N-N-N43G-C-A-2ANANCNANCNANANCNANANANTNGNGNTNGNGNCNGNANGN2T-G-G-G-A-C-C-C-A-G-A-T-1GA2GA1GC4TA1AT2CG22GA32CT23GA9AG19AG3-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20-G-N-N-N-N-NANAGCG1TA1CA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N50GC8AG18-N-N-N-N-N-N-N-N-N1TA21AG12CT7AG17AG32AG5TC34GA15AG39AG26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AT8AC1AG6GAGAGTAC3TC18GC9GA7TC3GAAG7TC2AT11CG7GA5AG32GA12GA1CT15GA10CT18AT22TC2AG26GA11AG20CT11AG2CT7GA7GA2-N-N-N-N-N-NTC8-N-N-N19CTCA2CA33GAGTATTCCG14TC3AG5CT6AGTA3CT8TC4TG14TA26CT1GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GA26GA38TC5TC5TC1TC3TC3TG7GT5AG9AG9CT1AG5AG2AGTC12CTTCTGAC10CG3GA14AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N13GT9-G-T-A-G-T-G2-N-N-N1GTGT6GCTC1GA12AG6-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNGNANANCNTNANANGNCNCNANGCAG2AC13AG2GA7GA15TC4GA3TC4CA3CA18TC6TC7AC2TGAT2TC20AG6-N-N-N-N-N-N-N-N-N-N-N-N5CT10GC6AG28GC4CG7CT42TC9AG3GA-N-N-N21GA1TCCT16TCCT9GA25AG10CA3-N-N-N-N-N-N2TC13TA25CA2GA11-N-N-N3GACA11AC4-N-N-N12AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,735,9075,9709,5,739,2.48e-153,541,79.184,582,plus,14TC3-N-N-N5ACAG3GA21GA1TCCT16TCCT4-N5GA12-N-N14-N-N10CA5TC13TA7-N17TGCA2GT7GA1-N-N-N4TCGACA11AC16AG12-N1GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA28-N2TC1AT1AN-N3-A10GT4TN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N-G5TC4TC18-N7-N8ATGC40TC15AT20CT4-N2AG1GA16-N9-N18-N19-N-N2-N6-N12-N14TCTC1GT-N-N-N5TC1-N6AN14
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,280,386,634,10651,10929,2.59e-58,225,84.643,237,plus,10-N2-N6-N6-N9-N-N-NATGC10-N14-N10-N6TC14-N1AT5-N-N14-N-N-N-N-N1CT6AG1GA1-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N15TCTC1GT5TC11A-9
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,280,9460,9708,10651,10929,2.59e-58,225,84.643,237,plus,10-N2-N6-N6-N9-N-N-NATGC10-N14-N10-N6TC14-N1AT5-N-N14-N-N-N-N-N1CT6AG1GA1-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N15TCTC1GT5TC11A-9
-OQ092464,Ref.B.NL.00.671_00T36.AY423387,0,9556,11027,9866,484,9400,569,10422,0.0,9226,83.742,8262,plus,22AG2-N21-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NCN7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG17-N-N-N-N5-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G-T-A-C-G-C-C-T-A-A-A-A-A-N-N-N-N-N-N-N-T10-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA34GA29AG33GA11GA20GT5AG6AG17TC3AG9GA40AT31CGAC2AG3CA2TG26TA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CT6AG20CTAC1TC2GA71TC6-N-N-N26GACT67TC17AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG35GA31GA36CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG11CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC1AG23TCTAAT2GA1GA8AG1-N-N-N17CT17TC5TC1AG12TC5GN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N9CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N5AG9GA1TC6AG3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG20TC29CA3AGCA3AG75GA7CTTA11GA58AG6AC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG35TC73TC33CT71TC74AG16AG6GA3TC11CT4GA12AGCA30TC17AT53GA3ACGNTC3AN32TN22CT16AG27CT2GA12GA2AG11AGGC18GA5GA5GA2AG55TC18GA59AG7GA1AG4AG11TA15CT23AG1CT27-N-N-N8GA4GA1CT12GA13AG91GA2AG20GA17TG8CT5GA5AG24AG7AG12GA2TC2CA3CATG50GA5GA3TC64AG17TC1AG12AG17CA5AC14AG47CT3GA47-N-N-N2CA2TA41CT24-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG14CT12GA61GA8GA50AC18GCGC16AG16CT110TG14TC25ATCT34GA3CT11GA6GA43AG3-N-N-N9CA37CT83GA17GA63-N-N6GA21CT12TGTG3AG10GAGAGA4GT6AGGA11CA14AG14TA8GA8TG-N-N-N-N-N-N2GT5GA78AG1GA1AG8GC17GA1TC20CG7CT46AG1AT7TC5CG5TA18-N-N-N8AG25CT16-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT9CGCG4-N-N-N5CTAG7GA17AT5AG15-N-N-N9AC35-N-N-N11GA4GA18CT1TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG15TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA6CAAG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5-A2CN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT25AGTC22TA7AG30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT3AT38-N-N5GA5GA8AG14AT13-N-N-N-N-N-N-N-N-N-N-N-N5TCGA11-N-N-N-N-N-N1TC3AG23AT-N-N-N-N-N-N47TC8AC29TA23TC26CT12GC7GA1GA12GA8CT12GA25TC18CG4TC5GA8AG26GA9AG2TGACTC4ATCT2CTANANTNANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT5GA3CTCT3AG2AT3CA2CA2GA3CTGAGA-T-T-T4AC5A-A-1GC2G-4GA4AGAT25GC5GA1GA5GATGGA4AG5AT6CG2TGTAAG5CT26AG1ATCA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GT8GA6CT27-N-N-N12GC1GA21GA4AG20GA5CT11CT8AG3TC6CA16-N-N-N26AG8TC3CT31GT-N-N-N15GA8TA8GA1TC17TG5TG16CA5TC32CA4-N-N-N-N-N-N27-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA8TG2AGAG3GA9CTAT2TA1GAGA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG6CA1CTACCA14CT6GA6CT5AG10GA29AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1A-1TC2TC3AG1G-G-3AGAT1GCGTTA2AG1TAGCACCA3GAAGCT5CA20GA9-N-N-N3CATGGA39AGGC4TC1CA4AGAC-N-N-N11TC15AT7AG8GTAGAGATANANCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T4GA3CT1CG8CT3CT15AG7GA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA52AGAG20-N-N-N-N-N-N-N-N-N1TA34CT32TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT11TG15GC1AG5AG23CT12TC8AG1AC5AG2CA31AC3AG4AC25GAAG9GT41CT2GA5TG15GACT14CT13CA16AG2GA2TC17CT-N-N-N-N-N-N9-N-N-N11AC39AG7AG11CT9AG4TC69AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12CGTC9TC17GA7GT11AG1AGAG7AG4CT3CT9CT3CT11TC15AG8GATC1TA11GTGTGT5TCTA40GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9TA11GAACGA2GATG1TG1-N-N-N1TG12TGAG1AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT21TG5GA-N-N-N-N-N-N-N-N-N-N-N-N17GA39GT1AG45AG2CT14-N-N-N54CG1GT26GA9-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GA9TC5GA24CA1GA15
-OQ092464,Ref.B.NL.00.671_00T36.AY423387,0,9556,11027,335,6,325,10088,10422,3.64e-99,361,88.657,297,plus,11AG2CT14-N-N-N54CG1GT26GA9-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GA9TC5GA24CA1GA15
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,7220,61,6658,5,7217,0.0,7152,85.748,6191,plus,14TC3-N-N-N3CA1ACAG9AT15GA25-N5GA9TC2-N-N14-N-NCTTC9TC1AG16TA7-N17-G-A-A-G-T-T-A-G-A-A-G-ATA1-N-N-N-C-C-A-A-C-A10TC1GC1TA5CT7GTAG3AG2AT5-N1GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT22-N4AT1-N-N2AG11CT1AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N7AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GTCT3-N-N-N6TC5AC17-N7-N9GC15CT6CT19AG1CT1GA35-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N1AG6TGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AG2-N-N-N13-N-N17-N-N-N-N-N-N16-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G10-N-N-N-N-N-N-N-NTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49ACAG27AG5AG3CA4CT12CA49TGCT4GA11GC30GT1TC21TC48AG7GA25GC2AG15-N-N-N3CA17G-4-ATA18AC4AC1GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA23CG1TCTA35AG20-N-N-N8AG12AT53AG1AG2TG38TC27TG13GT9GA13AG43AC28-N-N-N-N-N-N-N-N-NCA25TA2CT17TC5GA30GATC3TC8TC4AG54GA14ATAT7AG5GA17TC3CT2-N-N-N11AG2TC29AG8AG38GA2GA5AC5CT2AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-C-T2TCGA28TC9-N-N-N1CTAT32TC1TC3AC20AG26AG5GA21-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA25AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N11GA18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG34AG11GA50TA4AG3AG7AG21AG45GA91CT2TC20TC8AG101AG14AG50TC14TC17GA65GA5TC35AG14CA9AG11AG16CT22CT92GAGA2AC5AG59GA20AG23AG19AG100AGAT15TC20CA14AG26TCGC4AG32GA5TC18GA12CA30GA17GA24AT1GA6CT11CA17AG1TC26AG26GA35GA30GA3TC25-N-N-N2CT12TC1AG2TC8AG26CG26TG11CT17AG20AG26TC23TC2AG2AG4GA2CT3CA18GA16GA6CA7AT11CT44AG20GA18CT26AC1GA19GA24GA14CT63TG13GAAG20AGCA10-N-N-N5TA7GA3CT5CT39AG2AG5-N-N-N30-N-N-N19CT18CT29GA15AG61GA8AG11CT5CT6CT22GA3GA7AT2TC18AG5GA6AG21GA17TA29CAAG40AG8GT99AG40GA6-N-N-N2CT42GA1CT26TC68GA14AG54-N-N15CA20AGCT4CT3AGAG8AG7GT10CT12AC1CT26TC5GA8AT-N-N-N-N-N-N8AG6GA40CT30GA6AG5TG18CA24CT4TC5TC11GC14TG3AT2GT6GATCTA11CAAG13AG11-N-N-N17GA13TC12GA6-N-N-N-N-N-N-N-N-N-N-N-N4GT23GC4TC39AG15TC1TC5GA1-N22AG7GA27AT3-N-N-N6AGAG6AG3TC1CT7CA19AG5-N-N-N8TCTA31TC2-T-N-N12AG4AG16AG5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GA15-N-N42GA3CG46CT10AC43-N-N-N-N-N-N9CG3CA3AG6GC13ATGT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC6CTTA2GCTC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5GA5TC2CGAT5AG5AC3GT22-N-N16ANTNCNANGNGNANANGN2TA1GA2GA18C-A-C-C-A-T-5AG21AG-N-N-N-N-N-N22AC4CA2-N-N-N-N-N-N14TC23AG15TC14AG16CTCA7GA41TC15CGCT5AT21TC12AG25CT24TC36TG6TG6AG2GT4
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,3128,6663,9403,7303,10420,0.0,2413,78.261,2448,plus,4CA2AC5AG6T-AC1TG3GA1ATCG1-TGA6GATA6AG23TCGACG6AC4AG1AGAG4AG1AGAC14CT5AT3GA7GA2GA10GTGA6AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN7TA5TC2AG6TC10CT16-N-N-N6AT7AG41AT12GA4AG1AC23ACCA15-N-N-N19AG9GA23TC18-N-N-NAG5GA9ATAC9AG31TC1AC1AT2AG15TC12TC14TA2-C-C-G-T3-C-ATGTATG1AG4GA3CAAG4AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N1AG1GA1CA3ANTNAN8-G-N-N-N-N-N-N-N-N-N-N-NAN23GT3AGAC1GA1CA3GA4ACGA5GA5GA3TC1GACGAC18-G-G-A2GT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG14AG16TC3TC13CG21CTAT5AC1GA18A-A-T-GT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGCT3CT3AG2-C-T-G-A-A-G-G-G-T-C-A-A3CATC5-A-G-GTA1AG1AGGA3CA5TC5GA21-N-N-N4GTAG6GA22TC10AGAT2GA7AG1-N-N-N21TC1AGTC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTNCNCNGACAGT2-CGA4CT1CACGCT1TC8TC26TC44GA11GA21-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG4GA12-G-N-N-N-N-NANAGCGGACA1GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT46GC26-A-N-N-N-N-N-N-N-NGN36CT29AC44GA20TC2CA16AG44AG9AG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TC5AC10ATAC3TC18GC1AG21GCATCT4TC2AT43GA14GA5GA24GA10CT18AT7CA14TCAT1AG5GT15AG4GA41GA2AG2CT7GA1TC5GA1TC-N-N-N-N-N-N9-N-N-N2AC16CT37GAGTGT1AG14TC3TG2GA14CT4AG23GA28GA24AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GA26GA5CT20GT11TC5TC11TC45AG2AGTC1GT12TG6CA23AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N22TA5CG2GN-N-N-A11GA2AG17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9C-C-A-G-C-T-11ATGA23TC17CA6CG3TC13ACTC20GA17AG3-N-N-N-N-N-N-N-N-N-N-N-N5GT10GC33AG1GC4AG1GA6GA41TC6CA2AG4-N-N-N5AT15GA30GA9TC15AGCTTC9TC1AG-N-N-N-N-N-N16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-N-N-N-A-A-T-A10TC1GC1TA1TC-N-N-N3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,735,9104,9719,5,739,5.52e-137,486,76.735,564,plus,14TC3-N-N-N3CA1ACAG9AT15GA25-N5GA9TC2-N-N14-N-NCTTC9TC1AG16TA7-N17-G-A-A-G-T-T-A-G-A-A-G-ATA1-N-N-N-C-C-A-A-C-A10TC1GC1TA1TC3CT7GTAG3AG2AT5-N1GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT22-N4AT1-N-N2AG11CT1AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N7AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GTCT3-N-N-N6TC5AC17-N7-N9GC15CT6CT19AG1CT1GA35-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N14
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,335,59,360,10086,10420,2.37e-73,275,80.000,268,plus,16TC6CA2AG4-N-N-N5AT15GA30GA9TC15AGCTTC9TC1-G-N-N-N-N-NAN16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-N-N-N-A-A-T-A10TC1GC1TA2-N-N-N3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,285,423,675,10645,10929,6.82e-64,243,86.316,246,plus,5-NAC9-N2-N6-N6-N9-N-N-N1GC10-N5CT6CT1-N10-N8AG1CT1GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,285,9466,9718,10645,10929,6.82e-64,243,86.316,246,plus,5-NAC9-N2-N6-N6-N9-N-N-N1GC10-N5CT6CT1-N10-N8AG1CT1GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,1751,1,1746,455,2202,0.0,2186,93.946,1645,plus,254-A7GA1AG35GA4T-T-68GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG16TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA12CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG20AG44CT17TC47TC27TG99CG36GA23AG2GA30GATC36TC32CT11AG5CTAT7AG35GA20AG17AG8AG2CT26CT8GA9AG7AG30AG1GA14ACGA12AG24AG1CT9CT25TC24AG25GA9TC11CT24GT7AG12CT13GA8CT7AG26CA14TC5AT7CA5
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,301,550,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,9386,9635,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,180,1,180,9540,9719,2.04e-69,259,100.000,180,plus,180
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,9497,1,9493,151,9632,0.0,13151,98.473,9352,plus,13TG3GT7GA5TC56TG51GA129GC68TC84AG159AC359GC71CT3AG41GA79AG256YCWAYC2WA103AG146WA2AG38GA142TC72GT141TC52AG298TC8AG101AG125AG539AG65GA7GA4TC55GA2AG131GA13CT66TC25GA9AG38AG38CT11TC53TC50GA11CT1AG12GA6CA8AG263AG349AT21AG12AG313GA254ACAC26TC108GA105TC119AG229-T41AG5AG81CA45GA54CG3CA3AGGA18TC32TC11AC2-T-A-G49AG41GA69GA1GA51AG114GA215GAGA5CA3T-A-A-T-A-C-C-A-A-T-A-G-T-A-G-22GAAG6GA54AGAG24CT18GA30CA231TG16CT9AG33CAAC48TA99GACA225AC21TA17GA34CT61AG8GA207GC122AG68CT81AC3TC290AC4GA85AG143AG14GA38TC52AG146GA285GA25AG11TC47GA58AG11TG181GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,547,8947,9493,1,547,0.0,752,97.989,536,plus,23AC57GA37TC43TG3GT7GA5TC56TG51GA129GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,484,1,484,9236,9719,0.0,676,98.760,478,plus,17GA58AG11TG181GC68TC84AG59
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,4082,1,4082,1,4082,0.0,5487,97.036,3961,plus,14TCGAGC5GAACAG56GA21GA4CT5TA23TA18TG9GT7GA5TCGACA11AC16AG1AG11GA5GT10AG10AGTA5AG56AT6TC7TA7ATTG77GC79GA48TC103TC12AG148TC1CG12CTACAG44GA154AG27AG7GA25GC3GA31GA27AC3AG2GACT125AG138TG4CT41GA92CT18AC22GA8TC59TC107GA17CG6TC31GA17AG14GT46AG20AG2GA2AT35TC29GA88CT22CT49TC5AT16GC41GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG105AG11AG12GA52CT128CT21TA31AG12CT86
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,634,1,634,9086,9719,0.0,813,94.795,601,plus,14TCGAGC5GA1AG56GA21GA3AGCT5TA23TA18TG5GT3GA14GACA11AC16AG1AG17GT10AG10AGTA5AG28AG27AT6TC7TA7ATTG77GC79GA48TC84
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,403,494,2.15e-30,131,98.913,91,plus,18GC73
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,9488,9579,2.15e-30,131,98.913,91,plus,18GC73
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,8446,666,9069,1323,9673,0.0,9611,90.161,7615,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108CA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG35GA5AG2TC11AG17AG8AG38GA2GA14AG31CT4GAGA1AT4CT1AC4CA35CACT6AG28TC5AG44GA18GA5CT29AG11TCCT19C-T-2C-C-T-C-A-G-A-G-C-C-G-A-C-C-A-G-A-A-A-3CT28C-C-A-G-C-C-C-C-T-19TC5AT2-A-G-A11TC14AC1AG2GA8GA5T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA14GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG8AT2CA27AG22AG6AG55TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA34CA31GA28TC38CT35AG91TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC16AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT67AG5GT13GA26AT1AC53AG6TC28AG10GAAT17CT5AGCACTAT5AC2AT1AG1CT4AG3TC29AG35AC10TC2-T17AGCA15AG2GATC2TGGA2AG2AG26AC38GAGA3CG46GT5TC3CAAC43AC8TG3CA3AGGA18TC1CT5CT14AG9TC4TC2TA2GCACGA3TG26GACT22AT8GAGT39TC1AGAGAT5AG5AC3GT30CT5G-G-A-T-C-A-G-G-A-4TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC33GA1GA5TA37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG9G-T-A-G-G-2ATTA1AC2CT1AGATTACG1CAAG1TG1AG1-G1CA1AG2A-C-3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3AC2TC4CAAG4TC2AG3CT2TC33AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA35AG8GA11AG11TC2CT9AG5AG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39TA2ACAC2GA1-C-C2-A-G-A-G-G-A-C11AT2TGAT1GA3CT3GACA1G-A-T-7GA4AG20CT3G-3-G2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA19TG5AC12ACTCGA7AT42CTAT6GA19ATGT1GATA2AG1-A-C-T-T3-G-T3-G-A2-G-G-T2TA1-T3-A-C-T-G-A-A4CG1AG1AC1ACTA5AC5GA25GT7GA28TC8GAACTA6GA2CT17AG2AGAC21C-A-A-3AGTC1G-T-3G-1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA32AG1AG3GAC-G-T-8AT7CT38GC3CA16AG29AG12CT29AC28AG15GA5TG17CA56AG14AG10CT9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA21AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG12GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT5AT4AG21GA2TA2AG2GACT28G-A-A-2A-A-T-T-G-A-T-C-C-A-A-G-G-C-C-T-G-C-T-G-C-A-A-G-G-A-G-G-G-A-2AG17CA1GA4AG18TC8TC26TG2AG4TC41AG2AG2CT10GC33AG6TG1GA48TCGAGC5GA11AT9TC5GA1TC14AC13GA3AG14AG13TA23TA18TG5CTCA1AGGA4GAAG8GA12AC1TA5CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,627,46,669,1326,700,0.0,792,94.258,591,minus,33TC20TC68TG1GT16AT7AG3GATC3GACTCTTG4TG15CT11CT31CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT53AT1-T-T-T55
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,588,8482,9069,1,588,0.0,673,89.966,529,plus,14TCGAGC5GAAC10AT9TC5GA1TC14AC13GA3AG14AG6GA6TA23TA18TG5CGCA1AGGT4GAAG1GA5TCGA12AC1TA5CT8AG13GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,8140,882,8985,1584,9666,0.0,9469,91.032,7410,plus,6TC32TC59TC77GA5AG17CT17TA5AG29CT8GA32GT23CT6TA2GA1GA10AG14GA12GT34TC29GA60AT14AG12CT7GA11CT4CT3AG6AC4AG17GA11TG1TC5ATGAAG13TCTC23CA7AG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA17AG41CT13AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG57AG7TC32GA11TC56CT69CT45CT39AG95AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA2GA9GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA31CT10GA3AG5TA5AG12TA13AG38CT38AG12AG10GA2TC23TC2AG2AG2AT4CT18CT3GA1CT18AG2TA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG11GA5AG35CT6AC1AG30TA71TC26AG61GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29CA18CG7AGCA22GT99AG92GA13GA14TC23GA32AG17AG2TC34GA31CA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTA-G-6CT1AG3GA1GA14AT35AG25GA27CA29TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC14GA2GA12AGTC10CA9GA2AT21GT1GC24ACGA9GA17AG6TC19AG8AG8AG1GAAT11GA2CT9GACT6TC6CT4AG23AG23TCCA23GC7TC2-T12AG4AGGA2CT5GA6AG2CATC1ACCGCA2TG2AG33GA20GA10GAGA5GT2CT4GA23AT8CAGACGGTAT2CT3TA9GC46AG3CA4GA1TC2CT1GA2ACCT7TC4TC27TC4TC2TA2GCAC4TG26TA1TA14CT2TG5TC6CA20ATGT8AGGA1GA10AT2CA8AC3GT36G-G-A-C-C-A-4GAAT2T-G-G-4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-4TG5CG20CTAG4CT5AG2-C-T-A4GAGA1CA1CT36AG6GA28CT11CT11CT5CT14TC34AT2-T-G-G7AG14TCGACTAG9AG10TA76CG6CG6AG1CTAT1CG2TG1GACT-G-A-T7TCAC2CT1AG2CGCT1-G-C-G-G-G-A-G-A-A-T-G3GA1AGTG5-G4AG2GA1CA12TC3GA3CG4GATG8AG9AG3CG8CT17GA2GA3AC3TAAG1GTGA6AC12T-A-C-C-A-G-C-T-A-T-A-G-5TC2AG7TA5AGCT81GA5GTGA6ACTG16TC5AC6TC51TC24GA3TG15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC10GA3TA2AC1AG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA4AG39GA1GC9AC8GAAGTC8GA9-G-G3ATGA1GT1GA-A6GA7CG23GA7TC16AG23AT26ATAT2GA2CG3AT-T6ACA-2GAT-A-C-3AGGT10AT4TG2AG1-G-A-C1TCTA5AC10AGGA4GAGA6GA14GA46TA23AG3CT2CATC21T-G-A-2CAGT2T-A-A-C-A-C-1AT1TC2AG69CA36GA46CT46AC5AG14AG8TA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC16ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGTAT4TC2ATAC10CG46GA30GA10GT18AT4TC20AGAG20AG37CT22TA7GA2GC28CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG9TC7AG25GA5GAGT39GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT10AG5AT4TAAG1TGCG6CA3AG2GT1GAGT3GA6GA1ATAG23CG14GA4AG25GA9TACA9AG7TG6AC8AC12GA7A-G-G-6GA3AG2AG8CT7GC27AT7GC49TC5TC8CAAG25GA5AC7GA16GA25AG1AC28TA13AG1GT2AG5GTGA1TGGA5AG6CA1GA8GA3AC2TG17AG2AT12CT3TC1AG16TA5AG21CT1GA16AC1AG13AT15GT7TG19AG11G-10AGAC11AT22GC56AT22GA48AC31
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,846,40,881,1539,694,0.0,1076,94.563,800,minus,15CT14GA2GA23CT26CA22AC30AG2TC17AG38CT29GT17TC11AG23CT53CG35GA5AG1TG5GT20TCCT20TC69AGCT13AT8TC7CT17TG1CA75CT2TC29CT6CT31CT6TCTGGA23CT47AT-T-T-T-T12GATG21TC25
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,582,8404,8985,1,581,0.0,693,91.753,534,plus,8TC5TC9AG25GA5AC7GA16GA27AC28TA13AG1GT2AG6GA1TGGT5AG1GA4CATCGA8GA3AC2TG17AG2AT6GA5CT3TC1AG16TA5AG21CT1GA4GA11AC1AG13AT15GT7TG19AG11G-10AGAC11AT22GC56AT22GA48AC31
+MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,9719,9070,477,9480,577,9627,0.0,10903,92.381,8379,plus,25AG1-C-C-C-T-T-T-T-A-G-T-C-A-G-T-G-T1AGTA23C-5TG2T-A-GCAT11TGAG20GA29AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT89
+MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,9719,544,8946,9480,1,542,1.17e-179,628,90.809,494,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AG13GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT89
+MK115690.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9084,652,9689,652,9670,0.0,10957,92.459,8399,plus,15AG51AG25-T-G-A-G-T-A-C-G-C-C-A-A2TA71CTACAGGA17GA25GA6GA5CA38CT39AC17GT34GA29AG15GA25GC3GA51GA1GA5AC6GA4A-C-C-A-G-C-AGCT21AG8TC89AG11CT6CT119TG10AG35GA62TA83CT11AG23GA20TC71AG47TA5AG11GA26GA11TC5AG11AG2GT16CT13GA40AG1GT12TC5CT8TA7TC3AC1AG18AG1GA49CA1AT26AG12CT7GA22AG27GA13TC5ATGA15TC14ACAC7CA4CA12GA9AGAG35GA61CA77AG122TC8AG95CT5AG29AT8GA68CT11AT101CA20CTAG59GA82AG4AT16AG10AC36CT21TC9AG2AG19AG7TC52GT17CT2GA19CT15AC35AG8CT14CT8AG26AC5GA3GA32AG17TC1AG11GA76AG9GA95GA21GA16GA25GA3AG11AG12GA13AG38CT17AG47TC29AG7CT43AG2CA37TA20AG20TC17GA33AC21GA123GA29AT2CA59GA170CT11GA12GA7CT3AC17CA11GACA12AT21AG7AG4AG9CT8AG2GA17CA44CT2TA5GA71TC60GA14TA14CT26CA29GA73AC32TC68GC4CA1CA20AG3AG16AG6GT6AG14AG1AC20AG5TC16AT6CT3CT1GA43CT36GAAG22AG1CA35TC11AC14TG1TC1AT10TC1GT49TC4GA12AG8GA15CT19AG39GAAG12CA6AG3TC11GA27GA27GT23CT8GA18AG14TA9GT18CT2TC2-T33ACAG6CG10AG25AGTA26CT8GA13CA13CA9AT24CA4GC36AG6GA2TG3CA3AGGA9TC41TC4TC2TA2GC5TG26GACTCA21AT8TA31GA24AC3GT15TC20G-G-A-T-C-A-T-G-A-4TA11AG-T-G-G-A-G-A-T-G-G-G-G-G13TC51TC29AG7AC12CT34CT33TC21AG3GT5AT34AG87CG4CA1TG6AG1GT3GA3TA1AG3G-C-A-4GT1A-G-A-1TC5C-A-C-2AG2AGTC2TG1CGTA1ATCG2C-4C-C-A-C-T-2T-2TA1G-T-T-G-G-2GA2AG2GA19CT2CGTCGA12AG6AG4GA5TA3GACT20GA17GAAC2TC2AG5GA3AG1TC19CA79GA4GAATGA4AG1ACTG16AC5AC15GA47CA34AG5ATAC3AT4AG6AG7TC17TCGA9CA4GATA33TA2AC1CG3-C-C-A-G-A-G3GA11GA3TGAT1GA2GACT4GA1T-A-T-7GA1CT2AG4GA6CT4TA1CA3AGCT1AG1AG3CA4GA7ATAT2GA5GA6AGAC19-G-A-A1GT5GA6GA6GATGGC7GA18AGCT2TC1ACTATC39GATC22CTAT5AG1GAGCGTAT1TG6AGCA8GA2GA2GC6CA1AG1-G-A-C-A-C-A5AC10AG28GA34AT4CA6CA2CTGTACGA15TC5CT16GT3GAAG1G-C-T-3G-G-G-2CTAG1CGAT6CT19AG17CA15GA3CT40GA4CA13AG23TACA1CA5CT47GC5AG87AC28AG15GA44CA25CT4AC19AG13CT11TAGC1TG6CA2AC3TC18AC9GA12AG1AT5TC2ATGC9GA1CA8CA28CT1AG8CT12CT15GA4TA4CT11CT6AT47AG2AG26AC7CT30GA3AC26CTCA1GA3CA12CAAG17CT2AGCA6GA1TC4TC3AG3AC9TA3CT7AG13CATG32CT1GA49CT8CT2TC2GA11GT1GA30TC38AG10GT1TG1GA1GACAAG6TG10ACTG36AGGACT5AT4AG8TC2AG9TA5AG1AGGA28AG8AT14ATGA12TC18GA24-A-C-A-G-C-A4AC8AC4AG7GA5CA1A-A-A-4AG11AG2CT10GCGA11CT26CTTG44AC5TC9AG12TC12GA5AC24GA25AGCTTC4TA23TA24GT1GA1GA9ACGC6AG8CAGC1TA14AG6AT18AG4AG7CT2CG25CA5CT5AG3AC21ATTC5C-T-A-G-A-A-C-T-G-C-T-G-A-C-A-T-14TC2TG31G-6TC16AT21CTGC21CT22GT34GA84
+MK115690.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,602,9088,9689,1,585,0.0,679,89.701,540,plus,8AC5TC8ACAG12TC12GA5AC24GA26CTTC4TA23TA26GA1GT7GA1ACGC2TC3AG8CAGC1TA14AG6AT6GA11AG4AG7CT2CG25CA5CT3GA1AG3AC21ATTC5C-T-A-G-A-A-C-T-G-C-T-G-A-C-A-T-14TC2TG31G-6TC16AT21CTGC21CT22GT34GA84
+MK115571.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9394,9719,9061,410,9377,577,9625,0.0,10733,91.855,8323,plus,25-G-A-C-C-C-T-T-T-T-A-G-T-C-A-G3-G-G-A28AGCATC1GT1GA1CATG1-G-A-A-ATG2TA3TC1-G-A-G3AC2CT3-G1TC1TC1-G-G1AC2-GTG2AT2-T-G1GATGGC4CA2-G-C2CG3-CAGCACGTG1AGACAG4-C-T-G-G-TAG4-C-G-C-C3CACA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC6AG12TC1TA2AG6TC1CA52AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG2AG14AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC1GT6TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT8CT37AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC7AG4AG17CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT19AG6AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT32TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC1TC4TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-A-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC10AC13GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA7GA6AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115571.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9394,9719,542,8845,9377,1,540,2.31e-175,613,90.037,488,plus,14TC8ACAG18CT6GA5AC10AC13GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA7GA6AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115514.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9382,9719,9072,369,9381,577,9624,0.0,10860,92.262,8370,plus,25A-C-TG1ACACTCCT1CT3-T4G-1CT1C-C-C-2A-C-T-28A-G-3T-4TA8TGAG20GA29AG23-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4TG1TA-T-G-A15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T12GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1A-A-16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT81CT4
+MK115514.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9382,9719,541,8850,9381,1,539,8.58e-176,615,90.203,488,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT81CT4
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,9152,512,9583,577,9686,0.0,10851,91.882,8409,plus,24-A-G-A-C-C2-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27-G-G2T-3GATA1AG1TG1GA2A-T-C-C-C-T-C-T-2TA3TC4A-TGCACG3AT1CT1CG1A-A-T-29AG23-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4TG1TA-T-G-A15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T12GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1A-A-16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC25A-T-C-T-C-T-A-G-C-A-G-1G-G-G-C-G-C-25
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,668,8973,9614,1,649,0.0,688,86.976,581,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC25A-T-C-T-C-T-A-G-C-A-G-1G-G-G-C-G-C-25-G-A4-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,79,273,351,577,649,8.05e-10,64.0,78.481,62,plus,28TC2GTGT2AGCTTC2AT1A-T-C-C-C-T-CTCGCGTA27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,81,405,485,577,649,5.83e-09,61.1,76.543,62,plus,28TC2GTGT2AGCTTC2AT1A-T-C-C-C-T-C-A-CTCGCGCA27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,31,273,303,9662,9692,8.42e-04,44.0,96.774,30,plus,28TC2
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,31,405,435,9662,9692,8.42e-04,44.0,96.774,30,plus,28TC2
+MK115030.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9126,9719,9112,34,9126,646,9679,0.0,10568,90.935,8286,plus,21AG41-A23CG21GA3TA59CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA18GT50GATC12AG12AG1TGGA20CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG38AG7AG20AG18CT73GA11AG11TG2GA18TG19CG23GA29CT36CA3CA24CT23GA30GATC7TC34GA2TC29GA2TC8GT8TG44TC14CT14AG8AG6TC31GA2GA11CT41AT5CTTA8GA5GA27AT30AG4TC50GA57TC9CT7GA17CT26GA4CA14TC5AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG5AG11AG49AG11AG61GA3CT9TC30AG13AT29CT3CA25CT2TC8AG40GA36GA6AG11GA4AG21AT16GA8TC11GA51CA19AT21CT30GA21AG29TC5CTAG10AG23CT15GA7AGGA94GAGC66AG6CT17AG18GA10CT38TC51CGAT9CA41AG2GA14CT5CT2TC16AG21GA24GA43GA28CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG33AG13TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA6CT19AG4CT1AGCA12GA17CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGAC9AG3AG8CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC32TA77TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA7AC11CTCT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3T-1TC2-A2GCAC5CT11GC13GACT24TC6TA1AC17TA11GA24AC3GT27AG5CA2-A1GA1CACT1GTGC2GC1AC2AG1C-AG1CAAG2-G-G-GTG14TC1TA2TC11GT7AC8-T-A3-A3CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT5AT14CAAT29GA53GA3CT18CG6TG9A-A-T-2AG2T-C-T-AG3CGGACTCA4CT1ACTC4C-T-T-6AGTCAGAGTG1C-TG3TG5A-T-A-A-C-3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT12GA2GA11G-A-A-G-G-T-1GA2G-A-A-7G-G-G-2AGAC4GA1AT3TC2AG24AG40TA30GA5ATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10-A-A-A3-T-C-C4AC2CG1TG12GA6TGAT1GAGC2CT2AGCA1TA6GAGA4AG8GA15GA1GAAGAC1GA1TA6GA18TC2TGAC7AG4AC6-G-A-A1GT12GA6CATG23GA2AT2GA1TC3TC36AT7GA18ATAT5AG8A-T-G-7TAAGAGTG1GCGA3GAGATC6TGCG2AG1AGGA3TA5AC30TA8GA9GA22CAAGAT2GA35GACT2GATC12A-A-G-C-A-A-CT5TC1GATC5TGAT1AC4CT6GA59CA18AG11CA1TG20AG2GA12AG5CA1TA8CG44GC3GA52AG14AG66GA8TG71AGAC6CT6AGTC8A-C-C-C-T-A-G-A-T-1GT4GA6AG2TAGC9CA1AC3TC8AT1CG7AC1AGGA6GA11GAAG1AT5TC1TCATAC10CG4AG2GA5AG6CA13CA7CA9GA24GA4TA3CA1GT5AG12AT26AG20AG2AG4GT8AG20CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11TG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT10GA1CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC27AG3AC1GTTG6CG2GA9C-A-G-8AG19GC18GA16GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG9AG5GT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT99CAAGCTTG1ATATG-G-4C-41
+MK115030.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9126,9719,598,8529,9126,1,594,0.0,670,89.632,536,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1ATAG1AG15GT3GCACAGCG1CG8AG2GACG35GA25TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT99CAAGCTTG1ATATG-G-4C-41
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+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,9036,130,9032,649,9627,0.0,10320,90.317,8161,plus,18AG72-A-C-T-G-G-T-G-A-G-T-A-C-G-C-C-A-A-A-A-A47GA23CTACAG6GA31GA6GA29AG2GA75GT19GA7AG8TA13GATC20AG48AG20GAAG28TC1AG2GACT35GC53GA20AT2TC11AG17CA29GA38TC17AG2TC30TG22GT23GA2GA23CT2CT14GA47CT2CT47TC59TC77GA5AG14AG2CT17TA5AG29CT8GA32GT23CT3AGAC1GA2GA1GA10AG14GA12GT34TC29GA60AT14AG12CT19CT4CT3AG5GAAC4AG17GA11TG1TC5AT1AG13TCTC23CA7AG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA8CA4AG3AG55AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG25GA31AG7AC32GA11TC56CT69CT5AG13AG25CT39AG83TA11AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA12GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA31CT10GA3AG5TA5AG12TA13AG38CT38AG12AG13TC23TC2AG2AG2AT4CT18CT3GA1CT18AG1TCTA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG8AT2TA5AG35CT8AG9AG52TC39TC26AG25TC35GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29TA18CG7AGCA10GA11GT99AG92GA13GA14TC23GA32AG13TC3AG2TC34GA30AGCA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTA-G-6CT1AG3GA1GA14CT35AG25GA57TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC14GA2GA12AGTC10CA9GA2GT21GT1GC25GA9GA17AG6TC19AG8AG8AG1GAAT11GA2CT9GACTAT5TC2CT3CT4AG23AG23TCCA9CT13GC7TC2-T12AG4AGGA2CT5GA6AG2CATC1ACCGCA2TG2AG2GA30GA20GA11GA8CT4GA14GA8AT8CAGACGGTAT2CT3TA9GC46AG3CA4GA1TC1AGCT4ACCT7TC4TC7AG4GA14TC4TC2TA2GCAC4TG26TA1TA14CT2TG5TC6TA20ATGT8AGGA1GA10AT2CA8AC3GT36G-G-A-C-C-A-4GAAT2T-G-G-4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-3GA6CG17GT2CTAG4CT5AG2-C-T-A5GA1CA1CT36AG35CT11CTCA10CT5CT14TC34AT2-T-G-G22TCGACTAG9AG10TA76CG6CG8GT9AGGACT4CA2TCAC2CT1AG2CGCT2TC-G-G-G2TA2-G1GT2-T-G-G-A1-A7AG2GA8TC5TC3GACT2CG4GACGAC7AG9AG3CG8CT9GA7GA2GA3AC3TAAG1GTGA6AC12T-A-C-C-A-G-A-T-A-T-A-G-5TC2AG7TA2GT2AGCT51-T-T-G-T-G-C-C-C-C-G-G-C-T1-G-T-T-T-T-G-C-G-A-T-T-C-T-A-A-A-A-T-G-T-A-A-T-A-A-T-A-A-G-A-C-G-T-T-C-A-A-T-G-G-A-A-C-A-G-G-A-C-C-A-T-G-T-A-C-A-A-A-T-G-T-C-A-G-C-A-C-A45TC24GA3TG15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC14TA2AC1AG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA4AG3AC35GA1GC9AC8GAAGTC8GA9-G-G3ATGA1GT1GA-A6GA7CG23GA7TC16AG23AT26ATAT2GA2CG3AT-T6ACA-2GAT-A-C-3AGGT7TC2AT4TG2AG1-G-A-C1TCTA5AC10AGGA5GA6GA14GA46TA23AG3CT2CATC21T-G-A-2CAGT2T-A-A-C-A-C-1AT1TC2AG29AG39CA36GA46CT46AC5AG14AG8CA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC16ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGT5TC2ATAC10CG46GA22CA7GA10GT18AT4TC20AGAG20AG60TA7GA2GC28CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG17AG25GA5GAGT39GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT10AG5AT4TAAG1TGCG6CA3AG2GT1GAGT3GA6GA1ATAG23CG14GA4AG25GA9TACA9AG7CG6AC8AC12GA7A-G-G-6GA3AG2AG8CT7GC27AT7GC49TC5TC8CAAG25GA5AC7GA16GA25AG1AC28TA9GA3AG1GT2AG5GTGA1TGGA5AG6CA1GA8GA3AC2TG17AG2AT12CT5AG2TG1AG11TA5AG21CT1GA16AC1AG13AT15GT7TG2-A-C27G-10AGAC11AT22GC56AT22GA41
+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,543,8492,9032,1,542,4.15e-180,629,90.792,493,plus,8TC5TC9AG25GA5AC7GA16GA27AC28TA9GA3AG1GT2AG6GA1TGGT5AG1GA4CATCGA8GA3AC2TG17AG2AT6GA5CT5AG2TG1AG11TA5AG21CT1GA4GA11AC1AG13AT15GT7TG2-A-C27G-10AGAC11AT22GC56AT22GA41
+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,150,1,129,782,633,2.35e-34,145,84.667,127,minus,23-T-T-T-T-T-G-G-C-G-T-A-C-T-C-A-C-C-A-G-T72TC12AG16-C4
+MK115158.1,Ref.47_BF.ES.08.P1942.GQ372987,0,9143,8926,8919,162,9029,68,8923,0.0,9530,87.790,7830,plus,27A-C-C-T-2T-A-2TCAC2GA1TG1CGCACA1CGCT1AG1T-C-TA1TC3CGTA38AT1AG21-C-T-G-G-T-G-A-G-T3-C-C-A-A-A-A-A-T-T-T-T43GA20AG2CT1AG6GA20GA9CAAC6GA2AG26AG2GA11ATGC82GA7AG4TC8AG8GATC20GA3AC2GTAG25CT2GA11AG21AGCT6A-G-C-10CA9GA37AGTCGC8AC3GA8GC1CT2AT26GA2AG2AG8GA38CA12GTCG15GA5GC3CT4CT23TC9TC7AC2TC2CT23TC5GA17GA2GT2TCGC16AG5GT11CT5AT5CT17GA6GCGA11AGTC2TC6AG7AG5AT5CT11AC5GA29TC3AGCT7CT9GA6AG5GA14CT5AG3CA6AT4AGCTTC18TA7GT35GA3GT1AG32AG2TA3GCCAAG32GA11AG11GA14GA16TC4AGACCT3GACA1TGCT1GA1GA19TA4AG4AG8GT2TC19AG17GA23GA12AG8GA20TC2TC5GA8AT17CT9CAAG18CT4CTTC2AG1GA3AGAC4AG11AG4ACGA8CGAG1TG5GA2AGAG2A-C-A-5TC2TC4AC9GA1CA2TA2A-C-C-3AG3AG2CT3-C-C-CAT1GATG9AG21TC12GAGAAG7GA2AGCA1AG38GA8AC2GA1GA1CT1AG7GA6GA40AG12GA3-A3G-14CA1TG21AG19TC26GA8TC47AG22GAAG2TC14GA2AG22CT6TC4ACGA23TC36AG7AC20TA11GA26GA11CT2CT5AG17AG2CT2CT5GA27CT1GA8TA21CT2GT2AG4CA8AG101CT5TC8AG1GA24AG11GA2TG2AC63GA22GATC4GA6TC4CT32AC2TC20CA30CGATAG4CA3GA2AG4GA15TC8AG11GA23TC17GA2GA5TC1AG3AC5AG3GA7GA8ACGA14GA4AG32CTCT13GA5AG15AT40TC17TC5AG14CTTC22AGAT10TC16AG3AG24GA25AG2GA2CT20TA4AG3AG9TA13AC14TC32TC2CTTC4GA2AG17AG50TC2AG2AG2AT4CT18CT3GA1CT1GA9AG6AG19AC26TC1AT9GA41AG20GA14AG2CT8GA30CA1AC18GT22AG5GA26CT3TG10AG2GA11GA5AG8GA11TA16GA9AG8TC5CT8AC8AG11AG28TA52TC26AG22AG2TC35GA5AG49CA22CACG3CT8TC1AC1GA25AG3GA4AG2AG38TA11GA5AGCG7AGCA14GA7GT26AG34AG37AG20AC73TC3CG22TA2TC11GA8AG2AC8TC8CA11AG17AG2TA34GA10AG19AG2TAGA14AT16AC4GAGA3GA2TC1GAGAGAGA5GTTC3AC9AT9AG7GA6TC3GA13AW4GAAG1GA3GAGACA2GA1CT7GA14CT3CA7AG23AG21AC1AGAG3GAAG5CG6GA9AG3AG11AG6CA1GA9AG25AGCA25TC9GA1AC17TC14GA2GA2CT10TC10CG1ATCA4AG1GA1AGGC6AG14GCACGA4CTGTGAAGCT1GRARGA2TC9GA9GA44AG8AG10GAAT8TC2GA2CT9GC7TC2CT3CT1GA14TCGA1AC2TC5AG10CAAG5GT6CA7AG2TG8AT2GAGC7TC14AG2TCCA1GT2CT4GAGA9CA2ACCGCA2TG6GA29GA20GA2TC17CT4GATA2CT8AG1AGGA7AT8CAGACGGTAT6TA54GR1AC8GAAGTCAGAGCT4ACCT7TA4TC7AG10TC1CT13CT5AG18TC11TGTCTA3AT13TG33ATGT4CG3AGGA1GA1AG2GT1CT1GAGAAT2CA4TC38TC2AG2GA2CT11GAGT4CACA1CG5GA1TG4AC1CT1AT5AC2TG2GAGT2GTGAG-C-C-A-C-C-3CA2C-T-T-G-G-G-A-3C-4A-C-3TA2TA1-T1AT3GA1CG1CT72CT2AG8CT7TC3CT5CT14TC30GA1AGGTAT3-G-A-A21TCGACTAG8TC23GA8CT41CA5CT8TC5CT4CA1GA1-T-A-C-T2-C-A-C-C-A-C-T-A-A2-C-T-A-G-C1AT5GACT1CG15CT2TC5TC3GACT6ACGCCA2TCAG4A-T-A-A-2TA1CA2AG1-G1CG18GAAC11AG3A-3A-1GA2-C-A2TC2TA2CT2C-T-A-T-A-A-3CT2AC13AG7TA5AGCT12CT9GA37GA26GT6AC1TG16TC4GA7TC29AG18CT2TC13TC10GA4GA2GA4TC2AG3AC5TA4TAAG1CT1GA3TACA3CG12AG2AG2CT3AT2GA2GAAGAC10CT7AGAG27AG8GC1GAAG1CT18CT9GA30GA13GA1GC7AG1AC7TCGAAGTA6AG1GA11AC1GAGTGA1GA14CT23GA11CT1GC6TC3AG29CTAC15TA3AG1TG1GA1AGCA4GAGAATGA1AT1AC2GAT-A-C-2GA1GT6AGTCAT4AT1T-1AC1TC1T-T-10CA6GA5GA6GA5AT47CT1AC4GATC14TC8AGCA2CT2CG18GA2AGTAG-3CA1G-A-1AG1C-A-C-2CG3AG1TC11GA7GA6GAAG39CA17GA18GA19GC17AT1AT6CT46AG3AG1AGAG13AG7AT21AG12TC7AG29GA47AG11TA12CA2CA26CTTA13AGAC14GC3TC12ATAC1CT-A3G-1TC1TG2CT5TG35CT9GAAGGT10AG8AC2AT7AG40TC11TC7CA13AT4GC23TC21AG4TA15AG1TAGA34TC8AG2GA2TC7TA2TA6CTGC21AG8GA34AG3AGCA1TCAG3CAAGTC12AC8GA7GA10TG41TC7GAGTAT30GCCT6GA2TC8TC5GA11CT20TCGA1CT8CT2CTGA7CA4CT21GATA9TCAT8ATAGTC1TGTG7AG2AC12CG18GA11GA13GAGA2TAAG1TGCG6CA3AG1GAGTGA1GT3GA6GA1AT14GA6GA1TC1ACGT3GACT6TA5AG7CTAC11-A6A-8TACA9AG3TC3CG7CT3GC4TC1GTTG18G-A-A-5GT2AG5GA2TC38AT12GT1AC9CTAT39CT3CAAGAGCA10TG11GA5CT3AC7GA2CA39AG1AC2AG6CT10AG17GA3AG1GT2AC8TG13CA9GAGA5ATTG4TC7TCGA3AG3GA5GA5CG2CTTGCA3GC8GATC1AGGA16CA1GA8TCCTCAGATG5GA9AC13CT6AG10GT24GA2AG10AGGA6CT3AGAC31AG2
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+MK114705.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9411,9719,91,8973,9063,9629,9719,9.52e-29,126,97.802,89,plus,62AC10CT17
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+MK115009.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9207,9719,9078,150,9207,636,9627,0.0,9749,87.905,7980,plus,31AG41-A23CG21GA3TA38TG20CG3AG8AC3AG10TCAGCGCT9AGAG16GA17AG30CT2CT14GATA13CT2GA5TA2AG15GT50GATC9CT2AG12AG1TGGA20CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC11AG8AGCG1ACTA24AG10AG28AG18CT8AG41AG1AG20GA11AG11TG2GA10AG7TG19CG22AG9AG20CT24AG3AG7CA28CT20AGAG1GACT4CT24GATC7TC14AG7AG10AG3TC11AG16AGGA2TC8GT8TG10AG18AG14TC14CT14AG8AG6TC32AG13CT41GT5CTTA7AGGA4AGGA12AG14AT28AG1AG10AG17AG6AG7AGAG6AG8AG23AG6C-1G-A-C-T-A-A-G-A-C-13AG7TC9CT15AG9CT26GA4CA14TC2AG2AT4GA5GA4TC15AC3AT4CA1AG15GA10AG20AC1ACAG1ACTA7AG5AG11AG47AG1AG11AG2AG16AGAGAGAG5AG2AG29GA3CT9TC30AG10GA2AT12AG16CT3CA2AG22CT2TC8AG21TC7AG3AG6GA36GA6AG11GA4AG2AG9AGAG7AT8AG7GA8TC44AG1AG16CA19AT10AGAG9CT2AG49AG5AG23TC5CTAG10AG23CT15GA6AGAGGA3AG25AG3AG4AG55GAGC31AG15AG18AG6CT14AG2AG17AG5AG5CT14GA12AG10TC4AG3AGAG24AG16CGAT9CA10AG27AGAG1AG2GA7AG6CT5CT2TC4AG11AG46GA72CTAG33GA11AG2ACGA2AG5AG44AGGA13CT3AG26GA24GA2CATC4GACG12AGAG22AG2TC8AG7AG1AG3TCGA9AG18AG11AGAG2AG5CT17AG3CT3AG28AG10TC9AG2AGAG9TC2AGAG11AG9AGGA8GTGA1CT3AG10GA6TA6TCAT16GA4AG7CA6CT19AG4CT1AGCA12GA17CA3AGAGGA21AC1GA19GA16CT10AG6AG1TC2CT7AGAG2CA12AG6AG31AGAC1AG7AG1GA10CT5AG10AG8AT8AG16AG16AG52GA6TC11CG1TC6AG53AG5AG7AG21AG4CT18GC28CT3AC1CT19AG11TC9AT21AG1CTAG4AG4AGAG10AG2AG3AG1AGGA15AG1TA14TC9AG8AG13TAAG27AG48TC2TC51AG35CT14TA18AG22GA1AT71TC33CA4AG6AG58AG3CA21CT2AG5AGAG7CAAG1AG3AG1GT4CT19AC1AC6AG2CT22TC3AG3AT2AT13AC8AGAG32AG2CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA6AG7AG1AG7TC5AG8TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG7AG5AGGA2AG16CTCT12TC4CT2TC2-T10AG6AG9GA5ACAG3TC22AG17CATC9AG3AG14AG4TAGA10AC16CAGA24CT4CT7AGGC29AG19TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT8CT2GC13GACT24TC6TA1AC10AG6TA11GA18AG5AC3GT33CA-G3GA1CACT1ATGC2GC1AC2AG1C-C-1CG1CGTA1-G-G-G-G9AG4TC1TA2TC5AGAG3AGGT1AG5AC8CT1-C-A-G1CA2CA4AG16AGAGAG8AG1AG3AG8TC38GT6AGATGA10AG3AC2CA25GA6GA7CT3AG1AT14CAAT10AG18GA28AG24GA3CT18CG6TG9A-A-2TG2AGTACA1AG1C-T-1GAC-C-4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-3TG5AGT-G-A-A-A-2AG8AG21GA3CG4GA1AC7AG7ACCAAG6CT5CT4CT9AG2GA2GA11GA1AT4G-T-A-A-A-A-A-T-A-4GCGA2A-A-A-6AT3TC2AG24AG21AG18TA13AG16GA5ATGA6ACAG6AG8GCAC5GC28AG32CT4CT18AG2AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG12GA6TGAT2GC2CT2AGCA1TA4AG2GA4AG8GA4AG11-G2AC2GA2TGA-4GA18TC2TGAC7AG4AC5-G-G-A2GT12GA6CATG13AGAG8GA2AT2GA1TC3TC12AG3AG19AT7GA16AG1ATAT11AG1A-A-T-8TAAGAGTG1ACGA4GATC6TGCG2AG1AGGA3TA5AC30TA8GA5AG3GA22CAAGATAG1GA35GACT2GATC10AG1GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CT6GA3AG5AG9AG8AG7AG22CA6AG8AG2AG11CA1TG20AG1AGGA12AG1AGAG2CA1TA1AG6CG6AG7AGAG19AG8GC3GA10AG41AG14AG40AGAG22AG1GA8TG1AG14AG14AGAG6AGAGAG29AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAAC6AG2CA1AC3TC5AG2AT1CG3AGAG2AC1AG7GA11GAAG1AT5TC1TCATAC10CG4AG2GA5AG6CA13CA7CA9GA1AG11AGAG4AG4GA4TA3CA1GT1AG3AG1AG10AT10AG6AG8AG2AG17AG2AG4GT13AG9AG5CT8GA2AG2GT7TA11AC3AG18AG3CT7AGGA4AG2AG3AG8GA2CG5CTGTAC8CA1TCAG3TC3AG5CT4AG6CT13TG9TC13AG12AG4CTGAGA4AG5AG8AG8AGAGAG2AGAG5AC2GC2GA4AG2AG9GA7AG10AC13AT14CTAG7AC15AG9AGAGAG11TG5AG3GCCT1TG11TG11CG1CA16AG4AG1GACT13AG3AGAG5TG5GA3GTCATGCTAGAT1GACT1AG8GA1CTAG3AG3GA1AG3AG9A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-9AG3CA2AG3AGAG20AG3GA10CA1TC31AC1GTTG6CG12CG2AG2A-A-A-2AG5AGAG12GC18GA15AGGC4CG5AC22AG11TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC3AG3AG5TA18TG8AGGA12GA1GATA1AG9AC1TA8ACGA3CT1ATAG1AG7AG1AG5GT3GCACAGCG1CG8AG2GACG35AG1AG23TC1AT4GA10CTTC3AC2TG6AGAG11AGAG10G-14AG3AG4AT1AG20GC21CT10AG9AG20AG19AG37
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+MK115491.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9422,9719,9144,312,9387,577,9686,0.0,10905,92.104,8422,plus,25-G-A-C3-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A23C-TA1TA2TG1AC2A-2GA1T-C-C-C-TG1TG3TGCGTGCATA1GC3TA2CA2C-C-G-AT4GC1T-A-2TGACGAAG5AG18AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC26G-A-C-T-C-G-C-25
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+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,7800,1191,8938,1230,8996,0.0,8979,90.526,7061,plus,2CG17-G-A-C7AG5GA33AGGA4CT15CT5TC3AGTA6TC5ACACAG15CT4GAAG13AG7CA13GA13GC3GA24CA19GA14CT20AG13ACGA27GA8CT14CA1GA7GA10TC1CT3GA2TG34TA7AGGA37AG27TAGA11AG65CTCTAG9AG24GA3GA47AC4GT17CT11CT16GA28AG76GA8GA30AG55GA11GA11TC17GA8GA11AG2AG20AG35AC14TC5GA20CG3GATC79GTCG15TC14GA2GA14GA5TC18CT1AG3AG13GA3TA4AG8GA29AG11GA14CT2GA2GA23CT8GT32GA6AGCTAG5AG41AG8AG20TCGC15GA21AG9TG27GA46CA1GA32CT12TA4AG8AG8GA5TA5GA11AG14GA11GA11AG1AG4AG29CG4TA41AG11TC1GA63CT17TC17AG20GA5CG20AC8CA8AG2CT2TC5TG26TG3GA4GA12AG5CT22GA21TC8CT10AG4CT9CT6TA10GA6AT7TCCA19GA12TA6AG22AC10AG9AG7GA11AG57TC4CTTC28AG5GA50CTAG41TC16AG8AG44GA32GA14TA44TC3AC31CA26CT5TC2CT3GA7AG2CT14AG23TC38GA35GA5AG14GA23CT33AG31GA6TA10AG95CT2CG35CT5AC41CT36GA20TAGA10CT8GA9CT9GA5TC1GA2AG5GT1TG4AG10GC4TC1CT1AC25CT11GA2TG5AC2AGAGAT5CAAG32CA11CT2GA20AG3AGAGGA2CA5TC14TA1AGACGC16CT44AT6GT9GT48CT15TC2GA8GATG2AC1TC4AG4CT18CT4CG3GA5GA25GA11GA5GA2AG5TC9GA27GAAT14TC2CT7TC6TC2GCAG1CA5AG5CTGA9CA9TC6AG10AG15TC8AC7CT11AG10AG20TC2GT2GA1GA5AG20CT5CA4CA12CT20TG7CA2AC15GA2CT5AT28GC46CG7AGAGGA1AC2AC2GA8AGAC1CT5CT14AGCT6CA5AC5GA6GTGT2CG20GC1AGCG24TC6CA30AG9TC2AGAT4AT9GA40CT8GA2AG8GT5AG1GT7GCAT10AG2GA8CTTA11AGCA36AG5GA53GA20GA17GA21TG6GT13GA7TYGACTAG4AC11TC3GA38CTTC22CT5TC7TC3GACA11GT1CG1AGCA7-C-T-A-A-T-A-C-C-A-A-T-A-G-T-A-C-C-G-C-C-G-A-G7-A1AGTC2CA7CA1AG28AGAC4CGAG6GT1AG33GA17A-A-G-6G-A-T-2T-A-G-C-T-T-T-A-A-T-A-A-T-A-A-33TC5AC5TC38CT3AG12AT3AG7GA6CTAG2GA3CAAG11AC2GA7CA10TA2AG21GA9GA15TC17AG2CG1GA18CG7CTTA1GA7TC24GAAGCACA6AG7CT8GA2CT2TC3AT7AG5TA3CAAC1GACTAG10AG4ATTA4GA30AG9CT9-A3G-2GA1GA6GA1TC19CA7CA11GAGAGC5AT11CT2TGCA4GC25CTAG10AT18TC1AT13CA24AGTC1AC2GATAAGCGTA3-G2TGTAGT1AG1TG2TG1CA2GAT-17TC1AG5GAGA21AG22TC9CG1TA10AG3TCTA1AC35TA6GC1GA1GA2AG2GC1-A-A-C-G-A-G-A-C-T4CT12CA6GA26TC21GA16CG50AG1AG4CT1C-T-G-27AG29AG22GA1AT21GA19AG48TC2AG18CT1GA18CA46TC35CT12AG4AG6GA17GC1GA7AG8GATC9CGAGAC11TC17GA1GA3GA16AT3AT3TC2GCCA1CT7GA4ACCA2CT7GA7AGGATC8AC41CA2AGAG4GT9GA22AG5AG14TC8GA2AG10GA1TC30AG15CA22GC4AGCG9AGAGCACT9CG2CA9AT3CT3AC3GA47CT1GA24AG13AGTC7CT9GA9AG20AG2AT57AG11GT9CT2GA13CA8GATC4CA1AC5AG5AG5AG19GA15GTTG4T-2T-T-G-G-A-23AG5-A-A-C-T-A-A-G-C-C5GA12AT2GA10TC4CA10CA22AG7CG7TC7CA30-G-G-G12TC5TC1GAGA5AG33TC1GA42AC1GA2AT8GA35CT29CT11AG11GA2TC26AG9CG5AC4GCCA9CA5CA2GA3AG2GA21TA3AG15TA10GA6AGCT20AC4AG5TG7GTAG3ACAG4CATA18AG11CT1AG2TC3AC30G-24-G37CT5CT-T33TA22GA2GA45AC26
+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,1137,58,1194,1219,86,0.0,1395,92.964,1057,minus,2TC11TA2CT83TC41AC8AG17GA2TC48TC17AGCT3AG8TC28CT9AG2GA2AT5TC19TG48AG23TC13CT66TC8TG23AG16TA23CA15AG17AG50CT26GC1GTGA17GA8GA9TC1AG3CT3CT1CTCT18TC2CTAT4GA11CT14AC4GACA3CT12GT2TC7CT9TC12CT4CT16TC4CT8CT5TC2GA3GCAT3CT41TC2CT49GT9CT17TC7TG12TC6TCGTGA7TG57GTTC4A-C-T-25
+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,57,1,57,4,60,1.43e-11,69.7,91.228,52,plus,14TAAGGA8AG2TC28
+MK115527.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9481,9719,9071,480,9481,576,9625,0.0,10861,92.239,8367,plus,26-G-A-C-C-C-T-T2-A-G-T-C-A-G-T-G-T-G-G-A15C-3A-1ACTC2G-G-C-TA1GA1TGAG2TCAT2GA1TG1CGTACA2TGAG2TA17GA29AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115527.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9481,9719,542,8949,9481,1,540,8.48e-179,625,90.775,492,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AG13GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK114997.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9055,9719,9035,70,9055,648,9621,0.0,10441,90.747,8199,plus,19AG41-A23CG21GA3TA59CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA69GATC9CT2AG12AG1TGGA20CT6CAAG11AG20GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG13CA23GAAG28AG18CT73GA11AG11TG2GA18TG19CG23GA29CT36CA3CA24CT23GA30GATC7TC34GA2TC8TC20GA2TC8GT8TG59CT14AG8AG6TC31GA2GA11CT47CTTA8GACT3AGGA21AG2GA2AT30AG4TC50GA57TC9CT25CT26GA4CA14TC5AT4GA5GA20AC3ATGA21GA10AG20AC1ACAG1ACTA6GAAG5AG11AG49AG11AG61GA3CT9TC30AG13AT29CT3CA25CT2TC8AG40GA27CA8GA6AG11GA4AG21AT16GA8TC11GA51CA19AT21CT30GA21AG29TC5CTCG10AG23CT15GA7AGGA94GAGC66AG6CT17AG18GA10CT38TC51CGAT9CA41AG2GA14CT5CT2TC16AG21GA24GA43GA20CA7CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG33AG13TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA6CT19AG4CT1AGCA30CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGAC9AG3AG8CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC1CA26CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC32TA77TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA25AGGACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT24GA23CT15TC2AG21GA2GT9CT5CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA20CT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CTCA7GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2ACAC5CT11GC14CT24TC6TA1AC17TA11GA24AC3GT27AG5CA5CACA-T1GTGC2GC1AC2AG1C-A-1CG1CGTA1-G-G-G-G14TC1TA2TC11GT7AC8CT1-C-A-G1CA2CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT4AGAT14CAAT29GA53GA3CT18CG6TG9A-G-2TG3-A-A-T-G-A2AC6TC3TAAG2AG1-A-G-C-G-G-G-A-G-A-A-T-G4CT3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT4GA7GA2GA2TC8GA1AT4G-T-G-G-A-A-A-T-A-4GCGA2A-A-A-4GA1AT3TC2AG24AG12AG27TA30GA4GAATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC1CT5AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG19TGAT1GAGC2CT2AGCA1TA6GAGA4AG8GA15GA1GAAGAC1GA1TA6GA11ACA-6TC2TGAC7AG4AC6-G-A-A1GT12GA7TG23GA2AT2GA1TC3TC36AT7GA18-T-T-T3GA5-T-G2TGAT1TC2G-2TG3-C-A-A-A-T-A-A-C6TGCG2AG1AG4TA5AC30TA8GA9GA12TC9CAAGAT2GA35GACT2GATC12GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CTAC5GA59CA18AG11CA1TG20AG2GA18CA1TA8CG44GC3GA52AG14AG66GA8CG71AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAGC9CA1AC3TC8GT1CG7AC1AGGA6GA11GAAG1ATCT4TC1TCATAC10CGTA3AG2GA5AG6CA13CA7CA9GA16GA7GA4TA3CA1GT5AG12AT26AG20AG2AG4GT29CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11CG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT10GA1CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC31AC1GTTG6CG2GA9CG8G-A-A-19GC18GA10TA5GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG3TG5AG5GT3GCACAGCG1CG8AG2GACG16TC18AG22AG2TC6GA10CTTC3AC2TG31G-23AT22GC21CT93
+MK114997.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9055,9719,537,8519,9055,1,536,6.00e-175,612,89.944,483,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1ATAG1AG3TG11GT3GCACAGCG1CG8AG2GACG16TC41AG2TC6GA10CTTC3AC2TG31G-23AT22GC21CT93
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,9023,565,9537,623,9625,0.0,10895,92.563,8352,plus,26A-C-T-C-TG4T-13TGAG20GA29AG35G-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC4AG8GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT18GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,542,9005,9537,1,540,6.18e-178,622,90.590,491,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,28,370,397,622,649,0.002,42.5,100.000,28,plus,28
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,8984,200,9165,768,9676,0.0,10431,90.895,8166,plus,51CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA18GT50GATC9CT2AG4CA7AG1TGGA13AG6CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG2TA35AG28AG18CT73GA11AG10CATG2GA18TG19CG23GA29CT36CA25TA2CT23GA30GATC7TC34GA2TC29GA2TC8GT8TG44TC14CT14AG8AG6TC31GA2GA11CT41AT5CTTA8GA5GA24GA2AT30AG10AG44GA57TC9CT25CT26GA4CA14TC5AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG5AG11AG49AG11AG65CT9TC30AG13AT29CT3CA25CT2TC8AG40GA36GA6AG11GA4AG21AT16GA8TC63CA19AT21CT52AG29TC5CTAG10AG23CT15GA7AGGA94GAGC55TC10AG6CT17AG18GA10CT38TC51CGAT9CA15AG25AG2GA14CT2AG2CT2TC16AG21GA24GA43GA28CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG47TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA2TA3CT19AG4CT1AGCA12GA17CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGGC9AG12CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC110TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG2AG7GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA19CTCT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT11GC13GACT24TC6TA1AC17TA11GA24AC3GT27AG5CA2GA2CACA-T1GTGC2GC1GC2AG1C-A-1CG1CGTA1-G-G-G-G14TC1TA2TC11GT7AC8CT1-C-A-G1CA2CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT5AT14CAAT29GA53GA3CT18CG6TG9A-A-2TG2AGT-C-T-A-3CGGACTCA4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-3TG5A-T-A-A-C-3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT12GA2GA11GA1AT1G-T-A-G-T-G-G-A-A-7GCGA2A-A-A-4GA1AT3TC2AG24AG40TA30GA5ATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG12GA6TGAT1GAGC2CT2AGCA1TA7GA4AG8GA15GA1GAAGAC1GA1TA6GA18TC2TGAC7AG4AC6-G-A-A1GT12GA6CATG23GA2AT2GA1TC3TC36AT7GA18ATAT14A-T-G-7CAAGAGTG1GCGA3GAGATC6TGCG2AG1AGGA3TA5AC30TA8GA9GA22CAAGAT2GA35GACT2GATC12GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CT6GA59CA18AG11CA1TG20AG2GA12AG1AG3CA1TA8CG44GC3GA52AG14AG66GA8TG71AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAGC9CA1AC3TC8AT1CG7AC1AGGA6GA11GAAG1AT5TC1TCATAC1CT8CG4AG2GA5AG6CA13CA7CA9GA24GA4TA3CA1GT5AG12AT26AG20AG2AG4GT29CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11TG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT12CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC31AC1GTTG6CG2GA9CG8G-A-A-19GC18GA16GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1AT2AG9AG5GT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT105ATTC41
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,592,8574,9165,1,591,0.0,690,90.878,538,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1AT2AG15GT3GCACAGCG1CG8AG2GACG35GA25TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT105ATTC41
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,129,1,128,778,650,1.18e-41,169,96.124,124,minus,19AT3CT21GC23-T41TC17
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,72,130,201,623,694,1.90e-21,102,98.611,71,plus,44AG27
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,48,9167,9214,463,510,5.46e-12,71.1,100.000,48,plus,48
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,48,9167,9214,9548,9595,5.46e-12,71.1,100.000,48,plus,48
+MK115464.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9663,9719,9068,648,9663,640,9643,0.0,10103,89.314,8099,plus,27TGAGGA62AG22-A-A-A13AG20AGAG13TA24ACAG27AG10GA57CT2CT5TG9AT7AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG26GA8GA4TC8AC4ACGATC1CG2GACT20GT12CA31GA19AG3GA20CT2TC8GA2AG23GA95GA10AGAG30GA75CG2AG8GA27CT20AG11GA30TC9AG49GATCCT17AT8TG10AG15AG2AG11AG32AGAG7AG2AT35GA17AG42AGAC2TC41CT28AG6TC100AG18CA3AG9AG4CT52TC1AG3ATGA6GA7TC18GA1GA5AG3GC11GA9AGAG40AG5GA35CT17AG16AG17AGAG11CT30ACCTTC68CA6TC14AG4TC20TC8AG12CA7AG8AG3AG67AG8AG3AGAGAG2GA12AG61AG19AGGA11AG16AGAG12AG10CT6AG13GA6AG10AG5AG18AG11AG9AG33TC3AG9AG35AG4AG30TC24GA32AG5CT9AG17AG25AG11CTTC6AG2AG1AG2TC1GT11TC20CT8GT5AGAG52CA5TC27CT4AGAG1AG11AG14TCGC3AG9GA2AG19AG4GA7GA11GA4AC38AG3AG22AG36GATA11AG10GA50GA10CT3AG3AG64GA5AG8CT4GA9AG8GA2AG7AGAG2TA2CA1AG9AG16AG6CT4AGAG8CT25AG6AG5AG5GA2TC2TA14TC12AG10TC1AGAG12AG21GACT14GA6TA31AGCT1GA10GA6AT11AG39CT2AG4AC18AC1GA12AT46CT2TG4AG16AG5AG2AG32AG13CA12AG19AT2GA3AG12AG5AGAG45AG13TC11CT9AGAG8CT4AG20AG11TC34AG21AG31GA8AG11CT2CT2CT17GA1AG6GA3GA10AT8AC1CG10AG12AG11AG2AG3AGAGAGGA13GT3CA25AG45AG35CA93CA19GA46AG4GA25AG2TC2TC79AG61CA32CTAG5AGAG6CTCAAGAG28AGTC35GA34AG33AG5AG19AG1GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC47GA12AG8GA15CT21GT2AG51AG7AC22CT5AG10GAAT25CTAT5TC11AG22AG10AG7AG1GA4TA31TC2-T10AG4CT1AG16AG1CT24AG18TC34GA3CG10AT14AG2CT25CT8GC46CG3CA3AGGA18TCATCT5CT9GA7TC6TC4TC2TA2TCACTA3TG2AG23GACT4TA15AG1GT8CA12AG11AG6GA1GA6TC15AC7TA1AGGA32TACAAT1GT-C2GC1GC2AG1CGAGGACG2TGTG-G-G2AG5AG5TC10AG1AG13AG4AG2GA4CACA1GA1GT19AGAG14GAAG7AC37AGGA8CT11AG43AG5AT1AG1AT6AG6GA16GA3AG10TA28AG9TC14GA3CT18CG6TG2TC6AT1TG1GA4AGGA3CTGATA3TCTACA2AG2CG2CGTCTGCGTG1-G-A2AGCA2CA1TG-G2-A-A-A5AG2GA1CA7AT12CG11AGGA1AG4AG1AGAC1AG6GTCAGT3CT11AC5TA2GA2GCAC7G-A-2AT2A-A-A-A-T-A-A-C-A-G-2GC6AC4GA5TC2AG14CT9AG5CT15AG18TA13AG7AG8GA13AC5GA5AC27GA12AG6AG55AG1GA10AT4AT4AG6AG6AC13TC4ACGAAC1GT1CTAG2CGGA4TATACT4TC27TA2ACACAG3-C-C-A-G-A-G1AG7AG9TGAT5CT4GA1T-A-T-4AG2GA1CT2AG2GA21GA1-A-G-C3TA4GA23CGACCA5GA2AG5CT-T2AG1TACAAT2CT1CA3A-12TGTCCA4GT5AGAG9GA8AG18AGAG1AG4CT5TC9TA2TCCA15CT1AG1ATCT3AT1A-T-G-5GTAGTG3TAGC-T1CA1-G-G3TA3GA1TC3CG1GAAGAGTA3AG1TC-A-C-A5AC4AC25CA8GA5AG29AG9AGCA3AT19AGGC1TA12AG1GTAG1GT3-A1AC3TA1-T-G-A-G-T-C-C-G3CT3TC9AG3AG1AG6AG3TC12AG24GA13AG2AG19AG20GA11AGAG2CA8AT8AGAG6AG8CAAG10AG8GC2GA2AGGA9AT11GA1GT1CA17AG20AG21TC18AGAG5TC18GA10AG12CA16AG2AGCA4AG9AG20AG9AG4CGGC6AGGA3G-G-C-4C-A-A-A-A-2TCA-C-A-A-A-A-G-3AG2TAGC1CG4AG1GA2AC3TC5AG3AG4AG3AC1AG7GA20TC2AT8AGCA6AG2TATACA3AG3AG24CA11AG11AG5AG4GA5TA2CA1AT18AT25AG3AG39AG9AG5CT11AG10TA7GA7AG3GC14AG11AGGA4AG12AG2GA7GAGT17TC3AG10AG9AG8AG26CA17GA1TCCG1AG15AGAG6AG1AG3AGAG16AG2AG9GA5CT1AG27CT11CTAG7TC4TC9AGAG9AG1AG1AT6AG2TG5AG2AGTC1AT8TA3TG12GA17AG4AG1GACT13AG24AGAT1GA2AGAG2AG1ACAC1GA1AT2GA1AGAG8AG2A-C-G-A-G-C-T-C-A-G-C-C-A-A-C-A-G-C-A-G-A-T-A-A-A-G-A-23AG3AGAG11AC7AG6TC8CA1TC7AGGC14TC7AC24AG6G-A-T-5AG13GC7TG13CA8TC2AG6CG7GT39GA2TC9AG3GA41TC10GA22AG2AG10CA19TA13CG11CA2GA14GA12AC4CT11CG6AT4AG18AG7CT3TA6AG14CA12AG11ACAT11TA2AT3AGGA11AC6TG1CT2CA11AG-C-T-G-G-G2-C-T-T-T-C-C1-G-G12AG3AG4CT1AGAG19GC7AT10-T13AG9AG20AG11TG7AG44TC8
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+MK115530.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9544,9719,9071,541,9544,577,9625,0.0,10835,92.129,8357,plus,25-G-A4-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27A-C-T-C-T-G-1TG1AC2A-2GA1TG1CGCATA1CGTGCGCA2TC1TACG2CG10GA29AG35G-A-A-4TA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG34TC64CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG5GA5GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA18CA4GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC1AT54GA16CT3AC16AC35AG4GA2AG15TA8CA35TC11AC14TG3AT10TC7AGTC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT6TGCT59GT5AT21TC12AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG5AG42GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA23AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115530.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9544,9719,542,9012,9544,1,540,3.24e-176,616,90.221,489,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115520.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9589,9719,8890,661,9500,755,9626,0.0,10711,92.463,8220,plus,3CACA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC6AG12TC1TA2AG6TC1CA52AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG2AG14AG81A-T-G-G-G-21AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC1GT6TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT8CT37AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC7AG4AG17CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT19AG6AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT32TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC1TC4TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-A-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC10AC13GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA7GA6AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT83T-5
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+MK115520.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9589,9719,99,9492,9589,4443,4345,9.70e-29,126,94.949,94,minus,4GT7GA36AG20CT9-A18
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+MK115570.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9485,9719,9069,479,9485,577,9625,0.0,10895,92.370,8377,plus,25A-C-TG1ACACTCCT1CT3-T5CT1C-C-C-3CA1G-G-G-AT40TGAG20GA29AG20-A-C-T-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2GT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA24GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA29TC5TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTTA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA13GT4AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC16AT22GC18GT2CT8ACGT87
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+MK115702.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9098,9719,8943,204,9098,747,9608,0.0,10376,90.876,8127,plus,2GT2TG1AC15TC48CG2CA8CTACAG27AG4GA4CAGA45CA8CT2CT29CT1AG7AC7AG2CA6GT50GATC12AG5GA8TGGA4GA2TC5AG14AG32GAAG14G-C-C-12AC3AG2GACT2AG17CT14GC5AG26CT5CTCT20AG13AT14AG18CT7GA92GA32GT5AG3GA16AG2GA55CG10CA10CTGA16CT18TC5CT16GA12GATC7TC58GA11TC17AG6GAGA51CT22GCAG38GA9AG13GA8AT16CT4GAGA1GT2CGAC1GA27AG14CT9CT23TC1TC29GA42CT2CT29AG12CT13GA8CT35G-G-A-G-A-G-C-C-T-C-A-G-G-C-C-A-A-C-A-G-C-C-C-C-A-C-C-A-G-T-14TC5AT7GA2GA1CT3TCTC12AG4GT9GAAC3CA3CT3GA9AGAG19ACGC1AC24AC19CT33GACGGT75GCCT9TC14AT2TA32TC17AG38TC8AG14GA27AG58AG14AG14AT27AG31GA80TC5AG18AG25CA26AC32CT81TA16AC29AC23CT56AG2AG3GCGA11AG6GATC28GA43GA19AGAT9GA5AC1TG33AG8CT23AG10AGAG20GA12TC58AG39AT7AC23AG11GA56GA53GA6TA1TC44AG25TC12CG40GA3TC6CT4AG66TG4TC30AG5GA1CT14GA13AC9CA5AG5AT15CTTA6AT11AG10CT9GA45AC21GA34AG4CT3AG16TC20GA21AG4GA2TC9TC21GA9AT2GA7GA36CT68TC12AG25GA14CT12AG82CT3AC1CT41AT21AG2AG1CT2AG4AG21GAGA16TA17GA11GA32AT11CA50TC59TC45TA13CT27GA28TC20GA11GA41AG17CA60CA30AGAG4AG3AG27GA3AC9AG37GAAGGA6GA17TC4GTCA4GA5GA38AG3GAGA9AC5CA2GA6AG1CA24CT10TC11AC12CA1TG3AT10TC1GT54GA22GT1GA37TG5AG53TC28AG2AG6CA1GT11GA12CACTAT5TC3AG11TC34GA20GT20TC2-T17AG16AG3TCCT1CG22TG13AGCA35GA10AC25CT21CT1CAGC5GC35GA1AC5GA2TG3TA1AC1AGGAGA1CA5GA9ACCT31TC1TCTA1TC2TA1A-G-A-1GCTC13AGCT16GAGT22AT8CA1TC40AG1AT2CA8AC3GT33G-G-G-G-G-A-T-C-3A-4TA1GA5GA14-G-G-T1CG1CG1ATTG1CGTG18AG2AG5TCAT3AG10CA34AG5AG8AC11CT90AG1GA5AGAG46TA2AG5AT5CT3GA4CT52CGCT5TG6AG5A-C-C-A-T-T-G-A-G-C-C-A-2CG4CA6ATGA6TG4-A-G-C5-A-A-T1TA2GAAT2GA9AG2GA1CA16GA3CG7CA6AG4AGGT1AC14CT1CT15GA2GA2GC3CT2GA1GA1ATAG3AC2AC5TA2GA5TC9TC7ATGC26AC5AG47GA6GA4AG1AC16ACAC5ACCA10TC82GA9CT7TA1AG6AG4GA22AC1AT6TA33-A-A-AGA4-T-C-C4AC2TG1TG2CG16TGAT1GA3CT4G-A-T-1TA7GA4AG3AC21AG2AC1GA1TA7CA9CA3GA1GA4AGAC6CAAG11-G-A-A1GT3GACA7GAAT6AG1CA29TC40AT4GAGC4AG3TACA1TA1GT1-CAT2CG1ATCT2CT1AGAT3-T-G1TATG4T-G-3TG1CG1A-6GA2AC1AG1TA3-A-G-T-G-A-C2CA4TCAC8TC29AGGA1GA29TCCA19GA14AG23GT1CA2A-C-1GCGA3GAGT2A-C-A-G-1ATACTC4CT15GA3AG6AG30CT9GA5AG65AGCGCA9AT14CT4GA26AC3CA46AG12CT10GT11GA32AC2AG15GA16GA7GAAG26CT17CT9AG14AGTC14GA1AT5AG1TAAC1CG6GA1CTAC1TCTATC3TC6CG7TC1CG20AG1ATAT4TC2CTACAC3CA4GA3GT4GA8GA43AG16GA5TA4CT11CT6AT8TA1AG14AGAG20AG37CT22GA1TC5GATC29CTCA36GAATCTAC15TC4AG12TA7AC94AC18GC4GA2AG41AC16TC22AG8TG3CT4AG2AGTC9-T-A-T-T-C-G-C-C-A-C-A-T-A-C-C-T-A-G-A18AG5CA33CAAG4AGAT2GT2AG4GC2GAAC16GACG2AG1AG5GC11GA12TC9TC7GA31AG3AC15TC43AC9GA5GA11CT7GC4TG44TC5TC1TC7AG9CT15GA5AC24GA24AGAGCT5TACT6TAGC14TA18TG9GA1GA5AG19AC16AG19GT3AC1CG8GA6AGTA5AG30AG3AC5ACATAG18GA10CT1AG5TGTC1GA15GT22AG1G-G-G-A-G-G-C-G-T-G-A-C-11-T22GC21CT3TC5GT47GA6GA15
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+MK115095.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9137,9719,9115,49,9137,649,9681,0.0,9873,88.195,8039,plus,18AG41-A23CG9AG11GA3TA11AG20AG26CG12AC3AG10TCAGCGCT11AG15GA48CT2CT12AG1GATA13CT2GA5TA2AG15GT44AG5GATC12AG7AG4AG1TGGA13AG6CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC2AG8AG8AGCG27AG10AG28AG18CT50AG1AGAG19GA11AG11TG13AGAG6TG19CG22AGGA8AGAG19CT24AG3AG36CT10AG10AG1GA16AG13GATC7TC14AG18AGGA2TC28AGGA2TC2AG5GT8TG10AG18AG14TC14CT14AGAG7AG6TC46CT41GT5CTTA8GA4AGGA10AT1AG14AT30AG10AG17AG6AG7AG13AG26AG20AG7TC9CT14AGAG9CT26GA4CA14TC1AGAG2AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG3AG1AGAG10AG39AG7AG1AG11AG2AG12AG4AGAG6AG32GA3CT4AG4TC3AG14AG11AG2AG10AT12AG16CT3CA2AG22CT2TC8AG29AG3AG43GA6AG11GA4AG2AG5AG3AG8AT8AG5AG1GA8TC11GA31AG19CA13AG5AT8TC1AGAGAG8CT2AG49AG5AG23TC5CTAG10AG23CT15GA5AG1AGGA28AGAG3AG61GC31AG15AG18AG6CT14AG2AG17AG1AG2AGAGAG4CT38TC4AG3AGAG17AG23CGAT9CA10AG27AGAG1AG2GA2AG4AG6CT5CT2TC4AG11AG22AG23GA42AGGA24AG3CTAG33GA13AGGCGA2AG24GAAG23AGAGGA13CT3AG26GA24GA2CATC4GACG11AG1AG22AG2TC8AG7AGAG4TCGA1AG2AG23AG11AG3AG5CT17AG7AG28AG10TC12AG10TC2AG12AG8AG1GA8GTGA1CT3AG17TA6TCAT16GA4AG7CA6CT19AG4CT1AGCA12GA17CA3AGAGGA21AC1GA19GA16CT10AG5AGAG1TC2CT7AGAG2CA12AG5AG2AG29AGGC1AG7AG12CT5AG10AG8AT8AG16AGAG68GA6TC5AG5CG1TC60AG5AG7AG21AG4CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG4AG4AG11AG2AG3AGAG1GA9AG5AG1TA14TC32TA28AG48TC18AG24AG10AG35CT14TA18AG22GA1AT31AG39TC33CA52AG21CA21CT2AG5AGAG7CAAG1AG4AGGT4CT9CT9AC1AC6AG2CT22TC2AG4AT2AT5AG7AC8AGAG32AG2CT8AC46GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6GC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA6AG7AG1AG7TC14TC7CT5AG2AG7GA12GA11AGCACTAT5TC3AG7AG3TC19AG13AGGA2AG16CTCT12TC4CT2TC2-T10AG6AG9GA3AG1ACAG3TC22AG16AGCATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC13CT35TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT10AGGC13GACT20AG3TC6TA1AC10AG6TA10AGGA24AC3GT27AG5C-G-3A-C-C-A-G-G-A-4TA8AC4AG5AG-G-G-G-G-T-G-G-A-G-A-T-G5TC1TA2TC5AG4AGGT7AC8CT1-C-A-G1CA2CA4AG17AG9AG5AG8TC36AG1GT6AGATGA14AC2CA25GA6GA7CT3AG1AT14CAAT29GA28AGAG23GA3CT18CG6TG9G-A-A-2AG2TGC-T-A-3TGGACTCA4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-2ATTG5A-T-G-A-C-3AGGA7AG21GA3CG4GA1AC7AG7ACCAAG6CT5CT4CT12GA2GA11G-2AT1T-A-G-T-G-G-A-A-7ACGA2A-A-A-4GA1AT3TC2AG24AG40TA13AG16GA5ATGA6ACAG6AG8GCAC5GC28AG32CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG7AG4GA6TGAT2GC2CT2AGCA1TA7GA4AG8GA17GAAGAC1GA1TA1AG4GA18TC2TGAC7AG4AC5-G-G-A2GT12GA7TG12AGAG9GA2AT2GA1TC3TC12AG3AGAG18AT7GA16AG1ATAT5AG5AG2A-T-G-7TAAGAGTG1ACGA4GATC6TGCG2AG1AGGA3TA5AC30TA8GA5AG3GA22CAAGAT2GA35GACT2GATC7AG2AGA-G-A-1CTA-A-C-5TC1GATC5TGAT1ACAG3CT6GA3AG2AG12AG8AG30CA15AG2AG11CA1TG22AG13AG1AG3CA1TAAG7CG6AGAG6AG20AG8GC3GA52AG14AG40AGAG24GA8TG1AG14AG15AGAG6AG9AG20AGAC6CT1AGAG4TC5AG3C-C-C-1A-G-A-T-A-G-4GA6AG2TAAC6AG2CA1AC3TC5AG2AT1CG3AG3AC1AG7GA7TC3GAAG1ATCT4TC1TCATAC10CG4AG2GA5AG6CA13CA5AG1CA9GA1AG11AG5AG4GA4TA3CA1GT5AG1AG10AT17AG8AG2AG17AG2AG4GT24AG4CT8GA2AG2GT7TA11AC22AG3CT8GA4AG6AG8GA2CG5CTGTAC8CA1TCAG3TC3AG5CT4AG6CT13TG9TC32GAGA10AG8AGAG7AGAGAG2AGAG5AC2GC2GA7AG9GA7AG10AC13AT14CTAG7AC14AGAG9AG1AG11TG5AG3GCCT1TG11TG11CG1CA16AG4AGAGGACT13AG3AGAG5TG5GA3GTCATGCTAGGT1GACT1AG8GA1CTAG3AGAG13AG4A-G-G-C-C-A-G-T-A-A-G-A-A-A-G-C-C-A-12AGCA2AG3AGAG19AG4GA10CA1TC31AC1GTTG6CG12CG4AG2AGA-A-A-5AG13GC18GA14AG1GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA16AG7AG7TA7TAGCTC3AG9TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG7AG1AG2AG2AT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTCAG2AC2TG3TC2AG13AG11A-13AG3AG4AT22GC21CT10AG30AG20AG42ATTC46
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+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,9027,371,9347,622,9625,0.0,10818,92.279,8330,plus,27AGAGAGTA1T-2A-1CA1G-T-G-G-CA2CGCAGA1AGCGAG2TA1T-3C-3GA9GA29AG35G-A-A-4TA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG34TC64CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG5GA5GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA18CA4GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC1AT54GA16CT3AC16AC35AG4GA2AG15TA8CA35TC11AC14TG3AT10TC7AGTC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT6TGCT59GT5AT21TC12AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG5AG42GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA23AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,542,8815,9347,1,540,3.18e-176,616,90.221,489,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,28,91,118,622,649,0.002,42.5,100.000,28,plus,28
+MK115576.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9266,9719,9048,269,9266,600,9625,0.0,10863,92.352,8356,plus,5TC2GTGT2AGCTTC2AT1ATTGCGCA23C-TA1TA2TG1AC2A-2G-1TACG1CGTACA2TG4T-C-T-1TC2C-13GA29AG35G-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC4AG8GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT18GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
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+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,9720,18,9686,1,9574,0.0,11694,92.407,8982,plus,21CA1ACAG9GT15GA4TC2TC8TC1TA11GA1GC1TG52TA4TC10GT8TG3GT7GA5TCGA10TC1AC1TA14AG6AT6GA5GT44GA7GA4GA27A-C-A-A-G-G-A-C-T-G-C-T-G-A-C-A-T-C-C-AT15AT7TG31G-46GC36AC42GA164-G1TG5GA12TC31AG25CT82GA3AC97CT3AG14GT20TC8TC7GA28AG16TG35GA19CT5GC26CT8GA19A-C-A-C-A-G-G-A-A-A-C-A-G-C-A-G-C-C-A-G-G-T-T-A-G-A-C-8AC6GACT26AG6CA1TC89AG50TC11TC75CG1AG20CT76CG11GA27CT41GA8TC93AT70CT20AG41GA8AC5AG29CA12AGGC1GA16GA11AG12GACT27GA5TC1TC5AG99AG12CT4AG20CT24C-C-A-13TG8TC2TG2AT16TC7AG8AG17T-C-C-7GA9AGAG46GA26GA23CA4AG3AG73CT117TC8AG101AG14AG119GA69TC38AG37CT86TC22AT5CA2GA9AC2GA26AG29AG6GA13AG19AG7TC4TC2CA17AG26GT48AG1CA32AGCT7AG5AG32GA4AG21GA24GA4GA18TC19GA26GA51GC4AC10TA52GACT55GA8GA19AG1TC11GA3AG77CT2CT14AG47TC29AG6ATAT22GA1CT21TA10TC33CT19AG35CT5GA24AC21GA12AG5GA20CT59TC21TC19GT107GA23AG8GA27TC26AG49CT11GA20CT5CT41AT21AG2AGAC8AG21GA17CA203CA5CT6CT15TC40GA28TC26TA126CA30AG9AG23TA7ACAC8AG27GA1AG10CT61GA50CA26CT8TC11AC14TG3AT19TC47GA37GT9CT13AC3GA2AG5AG47TC14TC24GA27AT9AG11TC19AG14GA33TC7TC2-T17AG16AG3TC40GA34GAGA13CA3TC11AG2CT25CT8GC43CA6CA3AGGA11GC6GC1CT5CT24TC7TA2AC5TG14CT11GACT4CA26CA31GA24AC3GT27AG5G-G-G-G-G-A-T-C-3A-4TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT6TC1TA10AG16AG10CAA-A-C-10TC29AG7AC37AGGA66GA5AGAGAT21TC6GA5AG22AG27TC16GA5TC13CG1CT4TG3-A-C-T-G-A-T-T-T-G-A-A-G-A-A-T-G-A-T10CA3GT5TC2AG1-G-A-A-T-G3CA1-G-G1CGCA2TG2AG-A-G2GA15TA3CT1GAAGAC3GAAG8AG4AGAT1-C5G-9CT8GA11GA4CA6GA1GT4AC2ACGC1A-T-A-A-G-A-G-T-A-A-T-A-A-T-A-T-T-A-4T-T-C-2GA3AG1TC6CT11TC8AG71GA6GA6ACAG14GA23GA14TA53CA13AG4AGGT10AG28AG2TCGAAC1AT5AG40TA2AC1CG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA1CT2AG20CTTACG9CA4CAAT21GAAGAC6GA2AG9AGGAGA1AT12GA7TG1CACA20GAGA6TC16AG30CA19ATATG-G-A-G-A-C-4GA1GT1TC5C-T-C-3TC2GA2AG7GA1T-A-G-T-G-C-T-A-C-T-A-T-C-A-4AG2TG2T-5TC2TA5AC4AC3TC1AG5GAGA12TA8GA33AGAT11CA4TC6CT18GATC12CT4AG2CAGC2CT1GA1AT18TG9AT76GA27GA8-A-G-T1AGCG1TA1GA6CT46GC3GA24TA21AG20AG66GA24GA45CT9AG14AG26AC1AG9AC1TC1TC18AC9GA20TC2AT5CA13GA14AG6AC21CA25GA10CT18AT14AG32AG37CT14CT4TC5CT4GA1TC29CA4GA31GAGT2CG14TC3AG6TA6TA3CT57GA40TC8CTGT6GA9AG8CT23CT11CT45AG2TG5AG18TG3TC7CG25GACT22AG13AGGTCG1AGTA11GA20AC5G-A-G-C-C-A-G-C-A-G-C-A-15GA30GA3CT24CG2AG37AG25GC33AG2GA61CA2AG9GT15GA4TC2TC8TC1TA11GA1GC1TG21AG30TA4TC10GT12GA14GA10TC1AC1TA14AG6AT12GT44GA7GA32AT4GA11C-C-A-C-A-A-G-A-A-C-T-G-C-T-G-A-C-A-A-7TG31G-46GC36AC31
+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,663,9,671,9077,9719,0.0,789,91.855,609,plus,3TG2CGTA22CA2AG9GT15GA4TC2TC8TC1TA11GA1GC1TG21AG30TA4TC10GT12GA14GA10TC1AC1TA14AG6AT12GT44GA7GA32A-C-A-A-G-G-A-C-T-G-C-T-G-A-C-A-T-C-C-AT15AT7TG31G-46GC36AC42GA133
+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,509,9178,9686,1,489,3.68e-161,566,89.194,454,plus,21CA1ACAG9GT15GA4TC2TC8TC1TA11GA1GC1TG52TA4TC10GT8TG3GT7GA5TCGA10TC1AC1TA14AG6AT6GA5GT44GA7GA4GA27AT4GA11C-C-A-C-A-A-G-A-A-C-T-G-C-T-G-A-C-A-A-7TG31G-46GC36AC31
+OQ092463,Ref.B.TH.90.BK132.AY173951,0,9605,8996,8952,688,9605,1,8896,0.0,10987,93.186,8342,plus,4TC12GAAG12AC45-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T-G-A-G6-A-A-A-A48GA15GC16AG1GA10AC24AG36GA2GA20GA2AG9AG17TC3AG13TACG26AG16GA5AGCT12GA14TG26TG14GA20AGAG17GA6G-2A-C-5C-C-A-G-A-C-8CTCT23GA2CT2CG68GA125AG144AC19AG8CT2TC21CT38CT26TC31AG14AG3TGGCTCAT31AC2AG14AG11CT20AG53AT2TC8AG14AG17AG4CA1CT3GC17GA9CT8GA7AT15CT17TC5TCACAG18AG2AG1GA11AG9AG23CT5GA44GA35AG13AC21GA30CA1GAGA13GA9GA2TG6GA74AG23CA4CA63GA54GA35CT4AG5AGAC22CT107CT23GA32TC77GA53AG11GA8AG56GA20TG4TC79AT124TG3TC1AG16AG21CT38AT32GA9TC4AG5GA5TC80AG26GA28GA3AG11GA30CA26AT7CT11GATA61GA8GA17AG23GA3CT23AG37GA2TC16GA12CA47AG23AG20GA5AG2TC17TC14TG2AG38TG38TC11GA23TC32CT66TA4TC1AG12AG9AC7CA5AC26AG63TC25TA2CG5GA20GA68CT3TC7GA17AG29GA11CT44GA54AC30CA32TC9AG8CT5CT32TC38GA20CT35GA22ATCT83AG30CA67CG140GAGA33AG6GA16GT1TG4AGGA9GC1CA2TC26TA2CT11GA2TG2GT1AGAC10CAAG32CA5CT8GA20-G6G-7GA15TA25GT30CT22GA21TA48GA9TG9AG28AG53GA65CT6CA11AG1CA9CT12CAAT5AG2TC17AG7CT36AG10AG18CT1TC2AT2GAGA18AG15TC33GA3TG7CA1TA4TC8GACA1GA28TC2CA5GC50AC3AG3AC41CT10ACCT5GC6CT2CG22AGTG31CA31AG12AT15GT30CT2GA2GA14AG7T-T-G-16CTGCAT13GA8CTTA8AG7AT47TC13AG23GA6GA17TC49GT12GA8CY7AC4GA6TC42CT23CT17GA9AG3A-1AG1TG1A-C-A-C-C-5CT4GA6G-A-A-T-A-C-C-A-C-C-C-C-7AG1T-G-C-T-A-G-T-A-G-2GA5GT1AGTA2GC1GA10AG30CA4AGGA5AT27GA2CT16GA16TC35AC53AG26CTAG12AG4TACAAC10CA13AG21GA9GA11AG3TC26AG22CTTA28TG5GA2TATC12CA5TC6CT6AT7AG5TA3CA15AG2CT2TA2TA1GA9CACA19AG12AC4AG2AGAC2GA19AGCA6TG7GA4GA10G-G-G-2TC5GT6AG7TGCA1CA28CT5AG5AT20AT7AT2TA26GAAGGC3-G-A2TGTACATA2-A-C2AT3T-3TGCA2A-T-G-1CA1CA24GA6AG5CA40TCAG6TACA4AG3TCTA1AC8CT12AT13TA2GT2ACAC1TA4AG2GC4AGCACG2CT2GA2TC10AG14AG19TC38AG10CT54AG50AG1AG22AT34TC77CT1GA38AG26TC42AT7ATCG8GA35GA11AG4GA8TC44AT3TC2GC46GC41CA18GA5GA4GA10CT6AG40CT27AC1AG8GA29GC8CGAC6AG1CT15AT10CT7GA76GA11CGTC6GA17GA33AG10TC5TC5CT23CT3AG21CT1GTGAGT6TA15GC6AC37GA1TC13GTTG4T-2T-T-G-G-A-9AG17CA2GA2GA7ATG-C-A-17GA104-G-G-G12TC7GAGA29TC4CG4GC44TC13GAAC34CT29CT18AG1AC4ATTC32GA14TC23AG2GA6AT21TA12TA5AG15GA1AG4GAAG8TC11TG18CATA21TC8CT52GT75TG12
+OQ092463,Ref.B.TH.90.BK132.AY173951,0,9605,8996,576,38,613,8421,8996,0.0,756,95.833,552,plus,11GA11AC34CT29CT18AG6ATTC47TC23AG2GA6AT21TA12TA21GA1AG4GA9TC11TG18CATA30CT45TC6GT89TA98
+OQ092465,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9659,8890,8931,654,9563,1,8890,0.0,10476,91.278,8152,plus,18TA2CT13A-32T-TC11GTGAAG42CT32AT9TA1AT47GA26GA26AG16AG10AG19AG8GA2TC17GT5AG6AG17TC23CA30AT13AGCT19CA7TG8CT5GA49TC13AG3AG11AG2GA33TC2CT20GAGC2AC31AG2AG13CG3CT1GA39AG5CT8CT12CT4CT41AC29TC5GA17GA5TCGC16AG5AT11CT5AT5TA7CA16GCGA11AGTC2TC6AG7AG23AC5GA7AC2AC1AC5AG1GA8TC3AGCT7CT9GA6AG5GA2ACTCCTCT25AT6TC6GCCTCT2AG14GA6AGAG12AC2AC2AG5CT1AC6AG5AC2CT2CT5TCAT10AT2AG2AC4CGAGGC2AT4AT6AC3TC3ACGC1ATTG3AC16GA7AG14AT2AG12GATC5CG1CG3GC2C-C-A-12GA1GA1CT2TC2CT1GA1AG9AGGA1CT6GA5CT2CT14GA2TC5TC25GA21AG8CT11TC8GA22AGGA2CT17GA5AC8TC11AG9AT12CA15CT21TC40AG10GA20CACA1CA6AG9GA3GA2AG1TC18CT32GA1CA11GA47GA10CA1GC3CTTCTCGA4AC2CT8TC2AG4TC9TA8AG41AG5TC2CT11TC102GA7CT23GA32TC29AG38AG10GA117AG2CA116TC100GA16AG4TG3TC1AG14GA1AG42TC17GT42TC10AG5TC8TC14GA5GA29CT11GA4AG11GAAG7AG9GA11AG15AGGA33AG39AT19GATA13AG3GT55AG10TC3AG11TA14GA8GA15AG30CT6GA6CT1AG8AG1GA3AG8CA10CT81GA29TC11TG8CT5GA6TATA22AG1TC20CTTC4AG2TG5CA18TC10TC3CT20TG4AG20AC58AG12AG17CA5AC2CTCT73GA2AGGA34TG2TA27GT29GA37CT3TC7GA44AG2GA59TC35GA68TCGA15CATC2AG47AT27GA16AG14CT35GA8AG13AT3AT44GA45TC20CA64TG144GA8AC18AG5AG6AG8AG1GAGAAT3AG7GA11CA2TC1TC1AC6AG15TA20AT5GA3AG3CT3AT87GA9GA11GA9TC8CT56TA5TG32GA27CT2AG39AG34AC3CT53GA23CT8GA8AC2CTAG7GA17AT5AG53TC7TA9GA23CTCATC2AG2GA35TC13GA2TC5AG17TC6TACATA2TC2TC5GACA86GA3AC6CT16CT12GA9GT13ACCT5GCTA5CT27GA21TA7AGCT1CA23AG7AG18TG8GA32GA5TC12T-C-A-G-C-A-2TGG-T-T-5GA8CT29GACT3AG5AC3TC15TC8AG18AT1TC5TCCT21AGAC3TGAT2GATC17GT5TC26CT8AG3GA9GA12GA21GA10AT2GA8GA26TC5AG35GA13AGTG4ACCT3GAGA1GACACGATATTG3AG1CT3AGGA8CG2CGC-A-C-C-C-C-3TA1C-C-A-C-T-G-T-3T-2C-2GA4GT2TA2G-G-G-1A-G-G-6AG18AG5AT5CA2AG2GA25CT7GA2CT4AG11GA5AGCA4-A-C-A-A-G-C4GCGATC6GA24GA15AT7GA21GA17AC13CTAG6CAGA9TA22CT25GA51GA5AG20AGGA12AC12TG6AG2TA17AGTA25AG6CA1AC1GA3CTCTAT4AG6TG1TA11CACA24CT7ACAC6AG3GA6AG1TA9GA1GA1AG1GA2TG3AC3GA3AG11GAGAGA3-C-A-A5GA7TC3TCAG3AT25GA1AGACCT5AG3TC1AG15TC15TA2AC1AG4TA8CA1TA4TG-C-A-G4CA2GA1TGAG-C-A-C6GTGAGA1GA1AT3-A-G1CA1AT2-T5CT1CA24GA12CATG41GC4CGTCCA4AG5CT9CT8AGCT19T-11GAAT1CTAGCT1GCA-C-A-C-T-16TG7AG6AG48AG9AG56TA-C-A-A61AG14GA35GA32GA59GA29GA2AG26TC24GA17ATAC3GAAGCAATCG1GA6GA1TC17AG27AG2TG9CACT12TG27TA10GC4AG4ACAG24GA10GA17AG26GA26GA2TC7CT36TC7AG11CA18AC1AG11GA20GAAG9GAGT1CACG6GAAG1CT14TC7TACA5GA53AG6AG20GA11CGTC6GA5GC34AG10AG4CT11TC5CT17GA18GA2TG6GT1GACTATGT1GT6TA17AC16GA5GA7TA4AG21AT4TCGA3TG3AG3CA2AGACATAG20GA11GA1AT2AG25CT10CT19CT23CT8TC32GA5TC2TC8GA29TC2GA1CG4GT70TG21CA10CA27CACA30TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GAAG8TC5GA7AGTC3AG1GA3CA19CT5GA11CT4CT8AT10GA20
+OQ092465,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9659,8890,382,66,447,8509,8890,8.94e-130,462,92.147,352,plus,36TG21CA10CA27CACA30TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GAAG8TC5GA7AGTC3AG1GA3CA19CT5GA11CT4CT8AT10GA20
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,9788,1,9708,1,9719,0.0,11340,90.785,8886,plus,14TC8ACAG3GA21GA1TCCT16TCCT9GA36CA5TC13TA24TGCA2GT7GA5TCGACA11AC16AG13GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA30TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC7A-32TC6TC5TGAGGA39-A17-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T-G-A-G7T-75CTACAG43CA1GACT28AG5GA5TC11CT17GA2GA17AG2GA2AG5GA2CAGT1TC25AG4CT3TA1CA33AG7GA1GA11AG11GC20GC14GA14CA12AC1TC1AG2GACT35GC5AG15CG2CA35AG7TG11TC8AG12AT37TC87TG1AG11GT9GA4GA9CA1AGCA4GA34AC9GA7CG10CA11GA16CT15CA1TC29CT5CTGATC17AG60TC5GA11TG35GA29GA8AG8AG6TC41AG7AG33GA5CT6GC27AG12CACT1AG13CT11GA5TC1TCTA2TC1AG23GA76GA11CTGA6GA14CT49TC5AT6GA9TC7AG1CA31GA10AG40AG26CT20TA13AG11AG6GA95GA50AG5CT32AG40GA43AGCT15AG14AG5CT36AG16GA5TCGA3AC54TC29TC2TA69AG1GA26AC8CT1CT27CT14GT53TC2GA35TC20AG8GA27GA13AG14AG4AG7TC67CT24TG28TC23AG8CT23AG2CT11GACT16GA23GAGA12CA30GA50TC12CA51AT21GA14AG3AG14AG32GA1TC42TC1AG24GA9TC30AG11CT21CT13GA2AG14GA11TC23TC5AG30GA1CT1AG19CA7GT24CT11CT19AG66AC1GA11AGCT6GA24GA14CT53GA59AT44CT15AG10GA14TC5CT9TC40TA11GA15CT2AG8AG61GA8AG11CT5CT2GA38AT21AG2AGAC1GATC5AG3TC17GA5AG11CA25AG4AG55AT36GA56AG28CT63GA28TC77TC2CT72GA14TC6CT2AG1AT3AG9AG1AGAGTA5GT21ACTC51AG25TA52GA3GA9AC17CA29TC5TC11GC14TG13GATCGA7TC30CA16GA12AG21GA2GT23GC50AG9TC11GA7AG11AG5AG1GA27AT5TC5AC2GA2AG2GA14AT62TC2-T12AG21AG3AC2TG15GA6TG14CA35GA17TC14CT28AC5GC49TCCA3AGGAGA4GC12TC7CT24TC2GA4TA2GCAC5CT13CT11GA2CA22TC6CA44AT2GA1GT6AC3GT15TC5AC14GA2TACA-T1GTGC2GC1AC2AG1CGAGGACG1CTTG-G-G8GT8TA13AG17CT5GA2CA17CT20AG15TC19CT64GA19AGAT15GT5TC12AG20CG23GC10AG31CG6TG6-G-A-T-T-T-G-A-A-G4CA5TA-T-A-C2GA1GA3-G-T-A-G-C-G-G-G-A-G-A-A-T-G-A-T-A3CG1-G1CA2AG3AG21GA3AGTC4AGAC3GA8AGAT10CTGA4CT17GA2GA11GA6GCT-A-C-T-A-A-T-A-G-G-A-C-T-A-A-11GA5TC12TC14AG71GA3GAGAATGA4AGGAAC17TC5GC15CA17CT21TC7GA19GA14AG5ATAC3AT5AG6TC21AG2TCGAAC1AT5TGCA18TC1GA14GA3CA2AC1AG3GC-C-A-G-A-G-A14CA3TGAT1GA3CT4GA1A-A-T-7GA4AG2GAAC7GT4TA1CA1GT1AG2AGGAAG2GA1CA4GA1GA9CA1ACGA8AGAC6CAAGCAAG1GA6CG-G-A-A-A-T-A2GAGA1CA5GACTAC3GA22TA6AGCT2TC5CG30CT2CTAT2TA2GCCAGATC6GACTGA1GT2CT3ATAT1GAGA2CG1GA6CG2AC2CATAAGCGTG1GCGAGAGA3TC1TC2CA3TA1-G-T-G3ACTA5AC4AC16TA9GTAG6GA34AT3GC52CT1GA2AG2C-A-2A-A-A-T-G-G-T-G-G-C-G-A-G-A-A-T-G-G-G-A-C-C-C-A-G-A-T-T-G-G-C-G-A-G-4TA1AT2CG22GA32CT23GA9AG19AG32AGAGCG1TA1CA53GC8AG19TA21AG12CT7AG17AG32AG5TC34GA15AG39AG32AT8AC1AG6GAGAGTAC3TC18GC9GA7TC3GAAG7TC2AT11CG7GA5AG32GA12GA1CT15GA10CT18AT22TC2AG26GA11AG20CT11AG2CT7GA7GA2TC27CTCA2CA33GAGTATTCCG14TC3AG5CT6AGTA3CT8TC4TG14TA26CT1GA37GA26GA38TC5TC5TC1TC3TC3TG7GT5AG9AG9CT1AG5AG2AGTC12CTTCTGAC10CG3GA14AG6GACT23GT9-G-T-A-G-T-G3GTGT6GCTC1GA12AG6GA3AG1T-A-A-G-C-C-A-G-A-A-G-A-13AG2GA7GA15TC4GA3TC4CA3CA18TC6TC7AC2TGAT2TC20AG11CT10GC6AG28GC4CG7CT42TC9AG3GA21GA1TCCT16TCCT9GA25AG10CA5TC13TA25CA2GA14GACA11AC16AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-9
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,635,1,634,9086,9719,0.0,755,91.811,583,plus,14TC9AG3GA21GA1TCCT16TCCT9GA25AG10CA5TC13TA25CA2GA14GACA11AC16AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-9
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,637,9075,9710,1,636,0.0,749,91.366,582,plus,14TC8ACAG3GA21GA1TCCT16TCCT9GA36CA5TC13TA24TGCA2GT7GA5TCGACA11AC16AG13GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA30TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-11
+OQ092464,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9556,8890,8917,592,9460,1,8890,0.0,10536,91.533,8162,plus,18TA2CT45T-TC11GTGAAG42CT27-A-C-T-G-G-T-G-A-G-T-A-C-G-C-C-A-A-T-T46GA34GA35AG10AG28GA20GT5AG6AG17TC13GA3GT5CA30AT13AGCT24CA2TG8CT5GA47AG19AG11AG2GA34AC22GAGC2AC31AG2AG13CG3CT1GA27GACT10AG5CT21CT4CT23TC17AC29TC5GA17GA5TCGC16AG5AT11CT5AT5TA7CA16GCGA11AGTC2TC6AG7AG23AC5GA7AC2AC1AC5AG1GA12AGCT7CT9GA6AG5GA2AC1CTCT25AT6TC6GCCTCT2AG14GA6AGAG12AC2AC2AG5CT1AC6AG5AC5CT5TCAT10AT2AG2AC4CGAGGC2AT4AT6AC3TC3ACGC1ATTG3AC16GA7AG14AT2AG12GATC5CG1CG3G-T-A-1CTAG12GA1GA1CT2-C7A-9AGGA1CT6GA5CT2CT14GA2TC5TC14TC5GA4GA21AG8CT11TC8GA22AGGA2CT17GA5AC8TC11AG9AT34AG15TC25AG3AC10AG10GA20CACA1CA6AG9GA3GA2AG1TC51GA1CA3AG7GA47GA10CA1GC3CTTC1GA4AC2CT8TC2AG4TC18AG35AG11TC2CT11TC102GA7CT23GA32TC29AG38AG10GA117AG2CA116TC100GA16AG8TC1AG14GA1AG42TC17AT59TC23GA5GA29CT16AG12AG17GA11AG3AG11AGGA24GA8AG39AT15TC22GT55AG10TC3AG11TA23GA15AG30CT6GA4GA1CT1AG8AG1GA3AG19CT81GA23GA17TG8CT5GA6TATA22AG22CTTC4AG2TG24TC10TC3CT20TG4AG20AC20TC37AG12AG17CA2GA2AC2CTCT73GA2AGGA34CG2TA27GT13CT15GA37CT3TC7GA44AG62TC35GA15CA53GA15CATC2AG14CT60GA16AG50GA8AG13AT3CT44GA2GA42TC20CA37CT26TG144GA8AC18AG5AG15AG1GAGAAT11GA11CA2TC26TA8GA11GT5GA3AG3CT3AT68GA1AG16GA9GA1TC19TC8CT46AG9TA5CG54GA8AG39AG34AC3CT53GA23CT8GA11CTAG7GA17AT5AG53TC7TA9GA4GA18CT1TC2AG2GA35TC13GA2TC5AG17TC6TACATA2TC2TC5GACA86GA6CA3CT16CT12GA9GT13ACCT7CA3GTCT23CT1AGTC22TA1TC5AG2CA23AG5GA1AG18TG38TC2GA5TC2AG8A-T-C-A-G-C-3TG5GA9TGGA27GA4AG5AC3TC15TC8AG18AT1TC5TCCT21AGAC3TGAT3TC23TC26CT8AG3GA9GA12GA21GA10AT2GA8GA26TC41GA13AGTG4ACCT2CT5TGATCTCG1CA1AGGC3C-A-A-8CA5CGC-A-C-T-A-C-3TA1GTCA1GA4AG1GA10GA1G-A-G-2AG18AG5AT8AG2GA5GA19CT10CT4AG11GA9AG3TA2TC4GCGATC6GA24GA23GA21GA17AC13CT8GA15TC16CT25GA51GAGA4AG20AGGA25TG9TA17AGTA25AG6CA1AC5CTCTAT11TG13CACA24CT7ACAC6AG3GA6AG1TA9GA1CA1AG4TG3AC3GA3AG11GAGAGA-A-A-T-C-A-A5GA7TC3TCAGCA2AT22GA2GA1AGACCT5AG3TC1AG15TC18AC1AG4TA8CA1TA4TG-C-A-G4CA2GA1TGAG-C-A-C6GTGA2GA1ATAG2TACGAT3GAACCT5CT1CA24GA12CATG39TC1GC4TGACCA4AG5CT9CT9CT2AT16G-A-A-A-9AG1CAAT1CTAG-T26AG55AG9AG55-A-A-C10GA52AG14GA7TA34CT25GA59GA29GA2AG26TC24GA22GA2ATCG1GA6GA1TC15GC1AG7GA19AG2TG9CA10AG2TG38GC4AG4ACAG24GA10GA17AG26GA29TC7CT36TC7AG11CA18AC1AG32GAAG9GAGT1CACG6GAAG1CT9AG4TC7TACA5GA53AG6AG32CGTC12GC34AG10AG4CT17CT17GA18GA2TG6GT1GACT1GT1GT6TA17AC22GA7TA13TC11GAAT4TCGA3TG3AG3CA5AG20GA-C-T-G-A-G-C-C-A-G-C-A-A30CT10CT19CT23CT8TC26TG5GA5TC2TC8GA32GA6GT50CT7AG11TG21CA10CA27CACA15GA14TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GA9TC5GA7AGTC3AG1GA3CA19CT5GA16CT8AT10GA20
+OQ092464,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9556,8890,380,6,385,8511,8890,4.64e-128,456,91.842,349,plus,14CT7AG11TG21CA10CA27CACA15GA14TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GA9TC5GA7AGTC3AG1GA3CA19CT5GA16CT8AT10GA20
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,9751,61,9718,1,9719,0.0,11550,91.734,8945,plus,14TC6CA1ACAG9AT15GA30GA9TC16CTTC9TC1AG16TA24-G-A-A-G-T-T-A-G-A-A-G-ATA1-C-C-A-A-C-A10TC1GC1TA5CT7GTAG3AG2AT6GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA185TC5AG6TGAGGA8AG45-G-A-G-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T13TA72ACAG27AG5AG3CA4CT12CA49TGCT4GA11GC30GT1TC21TC48AG7GA25GC2AG18CA17G-4-ATA18AC4AC1GACT33CA23CG1TCTA35AG28AG12AT53AG1AG2TG38TC27TG13GT9GA13AG43AC28CA25TA2CT17TC5GA30GATC3TC8TC4AG54GA14ATAT7AG5GA17TC3CT13AG2TC29AG8AG38GA2GA5AC5CT2AG42-G-C-T2TCGA28TC10CTAT32TC1TC3AC20AG26AG5GA60CT7GA25AG38TC5AT16TC12GA28GA9AGAG34AG11GA50TA4AG3AG7AG21AG45GA91CT2TC20TC8AG101AG14AG50TC14TC17GA65GA5TC35AG14CA9AG11AG16CT22CT92GAGA2AC5AG59GA20AG23AG19AG100AGAT15TC20CA14AG26TCGC4AG32GA5TC18GA12CA30GA17GA24AT1GA6CT11CA17AG1TC26AG26GA35GA30GA3TC27CT12TC1AG2TC8AG26CG26TG11CT17AG20AG26TC23TC2AG2AG4GA2CT3CA18GA16GA6CA7AT11CT44AG20GA18CT26AC1GA19GA24GA14CT63TG13GAAG20AGCA15TA7GA3CT5CT39AG2AG54CT18CT29GA15AG61GA8AG11CT5CT6CT22GA3GA7AT2TC18AG5GA6AG21GA17TA29CAAG40AG8GT99AG40GA8CT42GA1CT26TC68GA14AG69CA20AGCT4CT3AGAG8AG7GT10CT12AC1CT26TC5GA8AT8AG6GA40CT30GA6AG5TG18CA24CT4TC5TC11GC14TG3AT2GT6GATCTA11CAAG13AG28GA13TC12GA10GT23GC4TC39AG15TC1TC5GA23AG7GA27AT9AGAG6AG3TC1CT7CA19AG13TCTA31TC2-T12AG4AG16AG22GA57GA3CG46CT10AC52CG3CA3AG6GC13ATGT30TC6CTTA2GCTC4TG26GACT22AT7GATA1AC32GA5TC2CGAT5AG5AC3GT39T-C-A-G-G-2GT1A-T-T-G-2GA18C-A-C-C-A-T-5AG21AG22AC4CA16TC23AG15TC14AG16CTCA7GA41TC15CGCT5AT21TC12AG25CT24TC36TG6TG6AG2GT1-G-A-A5TA5CA2AC5AG6TCAG1T-3GA1ATCG1GT-A6GATA6AG23TCGACG6AC4AG1AGAG4AG1AGAC14CT5AT3GA7GA2GA10GTGA6AC3AC7TA5TC2AG6TC10CT22AT7AG41AT12GA4AG1AC23ACCA34AG9GA23TC18AG5GA9ATAC9AG31TC1AC1AT2AG15TC12TC14TA2-C-C-G-T3TCTATG1-G1-G4GA3CAAG4AT2TGAT1GA3CT2AG1GA1C-A-T-12AG23GT3AGAC1GA1CA3GA4ACGA5GA5GA3TC1GACGAC18-G-G-A2GT12GA7TG14AG16TC3TC13CG21CTAT5AC1GA18ATA-T-G-6AGCT3CT3AG1-A-C-T-G-A-A-G-G-G-T-C-A4CATC5TAAGAGTA2-T-G-A3CA5TC5GA25GTAG6GA22TC10AGAT2GA7AG22TC1AGTC20GATACTCA2GAA-G-G-4CT1CACGCT1TC8TC26TC44GA11GA32AG4GA12AGAGCGGACA1GA6AT46GC26GA36CT29AC44GA20TC2CA16AG44AG9AG20TC5AC10ATAC3TC18GC1AG21GCATCT4TC2AT43GA14GA5GA24GA10CT18AT7CA14TCAT1AG5GT15AG4GA41GA2AG2CT7GA1TC5GA1TC11AC16CT37GAGTGT1AG14TC3TG2GA14CT4AG23GA28GA24AG12GA26GA5CT20GT11TC5TC11TC45AG2AGTC1GT12TG6CA23AG6GACT32TA5CG2GA11GA2AG26C-C-A-G-C-T-11ATGA23TC17CA6CG3TC13ACTC20GA17AG8GT10GC33AG1GC4AG1GA6GA41TC6CA2AG9AT15GA30GA9TC15AGCTTC9TC1AG16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-A-A-T-A10TC1GC1TA1TC3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26AT3AG11CT1AG2TC2-G16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA166
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,636,59,675,9084,9719,0.0,705,88.994,566,plus,16TC6CA2AG9AT15GA30GA9TC15AGCTTC9TC1AG16TA23-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G-C-C-A2GA10TC1GC1TA5CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA166
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,636,9104,9720,1,636,0.0,699,88.836,565,plus,14TC6CA1ACAG9AT15GA30GA9TC16CTTC9TC1AG16TA24-G-A-A-G-T-T-A-G-A-A-G-ATA1-C-C-A-A-C-A10TC1GC1TA1TC3CT7GTAG3AG2AT6GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA168
diff --git a/tests/expected-results-large-csv/errors.csv b/tests/expected-results-large-csv/errors.csv
index 67f7534..0101af4 100644
--- a/tests/expected-results-large-csv/errors.csv
+++ b/tests/expected-results-large-csv/errors.csv
@@ -11,8 +11,10 @@ KX505501.1,DeletionInOrf,"Smaller ORF rev_exon2 at 8377-8653 can have maximum de
 KX505501.1,InternalStopInOrf,Smaller ORF nef at 8796-9417 contains an internal stop codon at 8832
 KX505501.1,RevResponseElementDeletion,Query Sequence exceeds maximum deletion tolerance in RRE. Contains 265 deletions with max tolerance of 20 deletions.
 KX505501.1,LongDeletion,Query sequence contains a long deletion.
-MN691959,InternalStopInOrf,Smaller ORF vpu at 5625-5871 contains an internal stop codon at 5688
-MN691959,InternalStopInOrf,Smaller ORF tat_exon2 at 7937-8030 contains an internal stop codon at 7982
+KX505501.1,Scramble,Sequence is plus-scrambled.
+MN691959,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MN691959,InternalStopInOrf,Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6124
+MN691959,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
 MN692074,DeletionInOrf,"ORF pol at 2084-5096 can have maximum deletions 30, got 981"
 MN692074,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6551
 MN692074,DeletionInOrf,"Smaller ORF vif at 5040-5619 can have maximum deletions 30, got 81"
@@ -26,25 +28,26 @@ MN692074,RevResponseElementDeletion,Query Sequence exceeds maximum deletion tole
 MN692074,LongDeletion,Query sequence contains a long deletion.
 MN692145,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN692145,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-MN692145,Scramble,Sequence is plus-scrambled.
 MN090335,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 822
 MN090335,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN090335,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 282"
 MN090335,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 42 deletions with max tolerance of 10 deletions.
 MN090335,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, AT."
-MN090335,Scramble,Sequence is plus-scrambled.
+MN090335,Scramble,Sequence is minus-scrambled.
 MN090335,InternalInversion,Sequence contains an internal inversion.
 MN090376,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 933
 MN090376,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN090376,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 252"
 MN090376,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 95 deletions with max tolerance of 10 deletions.
 MN090376,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
+MN090376,Scramble,Sequence is minus-scrambled.
 MN090376,InternalInversion,Sequence contains an internal inversion.
 MK115581.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115581.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
+MK115690.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MK115690.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115690.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 12 deletions with max tolerance of 10 deletions.
 MK115690.1,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, G-."
-MK115690.1,Scramble,Sequence is plus-scrambled.
 MK115571.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115571.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115571.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 79 deletions with max tolerance of 10 deletions.
@@ -55,7 +58,10 @@ MK115514.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice dono
 MK115488.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115488.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115488.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-MK115030.1,DeletionInOrf,"ORF gag at 315-1857 can have maximum deletions 30, got 33"
+MK115030.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MK115030.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 270"
+MK115030.1,Scramble,Sequence is minus-scrambled.
+MK115030.1,InternalInversion,Sequence contains an internal inversion.
 MK115498.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115498.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115211.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6890
@@ -63,11 +69,12 @@ MK115211.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame in
 MK115211.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 252"
 MK115211.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 20 deletions with max tolerance of 10 deletions.
 MK115211.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-MK115158.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
-MK115158.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 252"
+MK115211.1,Scramble,Sequence is minus-scrambled.
+MK115211.1,InternalInversion,Sequence contains an internal inversion.
 MK115158.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 20 deletions with max tolerance of 10 deletions.
 MK115158.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-MK114705.1,InternalStopInOrf,Smaller ORF nef at 8357-8972 contains an internal stop codon at 8789
+MK114705.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 78 positions.
+MK114705.1,FrameshiftInOrf,Smaller ORF nef at 8796-9417 contains out of frame indels that impact 122 positions.
 MK114856.1,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 873
 MK114856.1,InternalStopInOrf,ORF pol at 2084-5096 contains an internal stop codon at 2213
 MK114856.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6326
@@ -78,25 +85,24 @@ MK114856.1,InternalStopInOrf,Smaller ORF vpu at 6061-6310 contains an internal s
 MK114856.1,InternalStopInOrf,Smaller ORF rev_exon2 at 8377-8653 contains an internal stop codon at 8434
 MK114856.1,InternalStopInOrf,Smaller ORF nef at 8796-9417 contains an internal stop codon at 8970
 MK114856.1,APOBECHypermutationDetected,Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 4.399685326687554e-65).
-MK115009.1,InternalStopInOrf,ORF gag at 315-1857 contains an internal stop codon at 360
-MK115009.1,InternalStopInOrf,ORF pol at 1619-4661 contains an internal stop codon at 1718
-MK115009.1,InternalStopInOrf,ORF env at 5788-8356 contains an internal stop codon at 5914
-MK115009.1,InternalStopInOrf,Smaller ORF vif at 4605-5184 contains an internal stop codon at 4644
-MK115009.1,InternalStopInOrf,Smaller ORF vpr at 5123-5414 contains an internal stop codon at 5282
-MK115009.1,DeletionInOrf,"Smaller ORF tat_exon1 at 5394-5609 can have maximum deletions 30, got 54"
-MK115009.1,InternalStopInOrf,Smaller ORF rev_exon2 at 7938-8214 contains an internal stop codon at 7995
-MK115009.1,InternalStopInOrf,Smaller ORF nef at 8357-8972 contains an internal stop codon at 8543
-MK115009.1,APOBECHypermutationDetected,Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 1.786005214078088e-40).
+MK115009.1,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 834
+MK115009.1,InternalStopInOrf,ORF pol at 2084-5096 contains an internal stop codon at 2183
+MK115009.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6350
+MK115009.1,InternalStopInOrf,Smaller ORF vif at 5040-5619 contains an internal stop codon at 5079
+MK115009.1,InternalStopInOrf,Smaller ORF vpr at 5558-5850 contains an internal stop codon at 5717
+MK115009.1,DeletionInOrf,"Smaller ORF tat_exon1 at 5830-6045 can have maximum deletions 30, got 54"
+MK115009.1,InternalStopInOrf,Smaller ORF rev_exon2 at 8377-8653 contains an internal stop codon at 8434
+MK115009.1,InternalStopInOrf,Smaller ORF nef at 8796-9417 contains an internal stop codon at 8982
+MK115009.1,APOBECHypermutationDetected,Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 1.3731449337509935e-41).
+MK115009.1,Scramble,Sequence is minus-scrambled.
+MK115009.1,InternalInversion,Sequence contains an internal inversion.
 MK115387.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MK115387.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 279"
 MK115491.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115491.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
-MK116110.1,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 849
-MK116110.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 77 positions.
-MK116110.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
-MK116110.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 93 deletions with max tolerance of 10 deletions.
-MK116110.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-MK116110.1,InternalInversion,Sequence contains an internal inversion.
+MK116110.1,InternalStopInOrf,ORF gag at 140-1643 contains an internal stop codon at 194
+MK116110.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 22 deletions with max tolerance of 10 deletions.
+MK116110.1,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, CC."
 MK115527.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115527.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK114997.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6356
@@ -104,9 +110,12 @@ MK114997.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame in
 MK114997.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 270"
 MK115518.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115518.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
-MK115065.1,DeletionInOrf,"ORF gag at 315-1857 can have maximum deletions 30, got 33"
-MK115065.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 82 deletions with max tolerance of 10 deletions.
+MK115065.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MK115065.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 270"
+MK115065.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 75 deletions with max tolerance of 10 deletions.
 MK115065.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
+MK115065.1,Scramble,Sequence is plus-scrambled.
+MK115065.1,InternalInversion,Sequence contains an internal inversion.
 MK115464.1,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 924
 MK115464.1,InternalStopInOrf,ORF pol at 2084-5096 contains an internal stop codon at 2183
 MK115464.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6425
@@ -123,7 +132,6 @@ MK115520.1,InternalStopInOrf,ORF pol at 2084-5096 contains an internal stop codo
 MK115520.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115520.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115520.1,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, GA."
-MK115520.1,Scramble,Sequence is plus-scrambled.
 MK115520.1,InternalInversion,Sequence contains an internal inversion.
 MK115503.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115503.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
@@ -139,15 +147,16 @@ MK115702.1,PackagingSignalDeletion,Query Sequence exceeds maximum deletion toler
 MK115702.1,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
 MK115702.1,Scramble,Sequence is plus-scrambled.
 MK115702.1,InternalInversion,Sequence contains an internal inversion.
-MK115095.1,InternalStopInOrf,ORF gag at 236-1757 contains an internal stop codon at 374
-MK115095.1,InternalStopInOrf,ORF pol at 1537-4561 contains an internal stop codon at 1636
-MK115095.1,InternalStopInOrf,ORF env at 5691-8271 contains an internal stop codon at 6018
-MK115095.1,InternalStopInOrf,Smaller ORF vif at 4505-5087 contains an internal stop codon at 4616
-MK115095.1,DeletionInOrf,"Smaller ORF tat_exon1 at 5297-5512 can have maximum deletions 30, got 54"
-MK115095.1,InternalStopInOrf,Smaller ORF vpu at 5528-5774 contains an internal stop codon at 5594
-MK115095.1,InternalStopInOrf,Smaller ORF rev_exon2 at 7853-8129 contains an internal stop codon at 7910
-MK115095.1,DeletionInOrf,"Smaller ORF nef at 8272-8905 can have maximum deletions 30, got 48"
-MK115095.1,APOBECHypermutationDetected,Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 2.055256122735383e-31).
+MK115095.1,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 927
+MK115095.1,InternalStopInOrf,ORF pol at 2084-5096 contains an internal stop codon at 2183
+MK115095.1,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6551
+MK115095.1,InternalStopInOrf,Smaller ORF vif at 5040-5619 contains an internal stop codon at 5151
+MK115095.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MK115095.1,DeletionInOrf,"Smaller ORF tat_exon1 at 5830-6045 can have maximum deletions 30, got 54"
+MK115095.1,InternalStopInOrf,Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6127
+MK115095.1,InternalStopInOrf,Smaller ORF rev_exon2 at 8377-8653 contains an internal stop codon at 8434
+MK115095.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 213"
+MK115095.1,APOBECHypermutationDetected,Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 9.460464921885922e-40).
 MK115490.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
 MK115490.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
 MK115576.1,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 80 positions.
@@ -155,19 +164,16 @@ MK115576.1,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum inserti
 OQ092466,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 OQ092466,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 261"
 OQ092466,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, GC."
-OQ092466,Scramble,Sequence is plus-scrambled.
-OQ092463,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 33 deletions with max tolerance of 10 deletions.
+OQ092463,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 26 deletions with max tolerance of 10 deletions.
 OQ092463,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
 OQ092465,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, GA."
 OQ092462,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 OQ092462,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 255"
 OQ092462,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 23 deletions with max tolerance of 10 deletions.
 OQ092462,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-OQ092462,Scramble,Sequence is plus-scrambled.
-OQ092464,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 28 deletions with max tolerance of 10 deletions.
+OQ092464,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 19 deletions with max tolerance of 10 deletions.
 OQ092464,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
 OQ092467,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 OQ092467,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 237"
 OQ092467,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 22 deletions with max tolerance of 10 deletions.
 OQ092467,MajorSpliceDonorSiteMutated,"Query sequence has a missing splice donor site, --."
-OQ092467,Scramble,Sequence is plus-scrambled.
diff --git a/tests/expected-results-large-csv/orfs.csv b/tests/expected-results-large-csv/orfs.csv
index e1ec262..9bf4483 100644
--- a/tests/expected-results-large-csv/orfs.csv
+++ b/tests/expected-results-large-csv/orfs.csv
@@ -10,17 +10,17 @@ KX505501.1,rev_exon2,1747,1927,forward,1.9802197802197803,DASGVLQGLLTLSFSQGTFRWG
 KX505501.1,vpr,1748,1751,forward,2.1884615384615382,M,M
 KX505501.1,tat_exon1,1748,1751,forward,2.1875,M,M
 KX505501.1,rev_exon1,1748,1751,forward,2.1653846153846152,M,M
-MN691959,gag,639,2148,forward,0.3007843137254913,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*R*
-MN691959,pol,1934,4946,forward,0.1750246791707799,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-MN691959,vif,4890,5469,forward,0.34375,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*
-MN691959,vpr,5408,5699,forward,0.375,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*
-MN691959,tat_exon1,5679,5895,forward,0.2777777777777777,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ
-MN691959,rev_exon1,5818,5896,forward,0.46153846153846145,MAGRSGDSDEDLLKTVRLIKFLYQSS,MAGRSGDSDEDLLKTVRLIKFLYQSS
-MN691959,vpu,5910,6156,forward,1.809876543209876,MQPIQIAIVALVVAIIIAIVV,MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*
-MN691959,env,6070,8656,forward,0.4873684210526319,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*
-MN691959,tat_exon2,8237,8333,forward,1.243333333333333,RPTSQTRGDPTGPKE,RPTSQTRGDPTGPKE*KKKVERETETDPFD**
-MN691959,rev_exon2,8238,8514,forward,0.4945054945054945,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*
-MN691959,nef,8657,9278,forward,0.5230392156862744,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*
+MN691959,gag,639,2142,forward,0.05400000000000005,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*
+MN691959,pol,1934,4946,forward,0.03589232303090717,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+MN691959,vif,4890,5469,forward,0.0625,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*
+MN691959,vpr,5408,5702,forward,0.21153846153845945,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*T
+MN691959,tat_exon1,5679,5895,forward,0.29166666666666674,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ
+MN691959,rev_exon1,5818,5896,forward,0.5769230769230769,MAGRSGDSDEDLLKTVRLIKFLYQSS,MAGRSGDSDEDLLKTVRLIKFLYQSS
+MN691959,vpu,5910,6156,forward,0.7060975609756097,SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL,MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*
+MN691959,env,6070,8683,forward,0.0867990654205606,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*DGWQVVKK*
+MN691959,tat_exon2,8237,8333,forward,0.19999999999999996,RPTSQTRGDPTGPKE,RPTSQTRGDPTGPKE*KKKVERETETDPFD**
+MN691959,rev_exon2,8238,8514,forward,0.16483516483516492,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*
+MN691959,nef,8657,9278,forward,0.16991869918698432,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*
 MN692074,env,2,4115,forward,1.9582943925233647,MNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI,EGLIWSQKRQDILDLWIYHTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPEKVEEANAGENNSLLHPISLHGMEDPEKEVLMWKFDSRLAFHHMARELHPEYYKNC*LRAIYKGLSAGDFPGRRGLGGTGEWRALRCCI*AAAFCLYWVSLVRPDLSLGALWLAREPTA*ASIKLALSALSSVCPSVV*LW*LEIPQTLLVSVENL*QWRPNRDLKAKEKPEELSRRRTRLAEARTARGEGRRLVSTPKILTSGG*KERDGCESVSIKCGRIRQMGKNSVKARGKEKI*IKTYSMGKQGARTIRS*SWPVRNIRRL*TNTGTATTIPSDRIRRT*III*YNSNPLLCASKDRGKRHQGSFREGRGRAKQK*EKGTASSS*HRKQQPGQPKLPYSAEHPGANGTSGHIT*NFKCMGKSSRREGFQPRSNTHVFSIIRRSHPTRFKHHAKHSGGTSSSHANVKRDHQ*GSCRMG*IAPSACRAYCTRPDERAKGK*HSRNY*YPSGTNRMDDK*STYPSRRNL*KMDNHGIK*NSKDV*SYQHSGHKTRTKGTL*RLCRSVL*NSKSRASFTGGKKLDDRNLVGPKCEPRL*DYFESIGTSRYIRRNDDSMSGSGRTRP*SKSFGGSNEPSNKFSYHNDAERQF*EPKKEC*VFQLWQRRAHSQKLQGP*EKGLLEMWKGRTPNERLY*ETG*FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI*
 MN692074,gag,789,2292,forward,0.13880000000000003,MGARASVLSAGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIATLYCVHQKIEVKDTKEALEKVEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIIMGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQKGNFRNQKRNVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPAQKQEPIDKELYPLASLRSLFGNDPSSQ,MGARASVLSAGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIATLYCVHQKIEVKDTKEALEKVEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIIMGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQKGNFRNQKRNVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPAQKQEPIDKELYPLASLRSLFGNDPSSQ*
 MN692074,pol,2084,4115,forward,0.7912263210369039,FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI,FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI*
@@ -76,17 +76,17 @@ MK115581.1,env,6111,8652,forward,0.49135514018691584,MRVKGIRKNCQRLWRWGTMLLGMLMIC
 MK115581.1,tat_exon2,8233,8329,forward,0.28666666666666596,RPTSQPRGDPTGPKESKKKVEKETETDQFD,RPTSQPRGDPTGPKESKKKVEKETETDQFD**
 MK115581.1,rev_exon2,8234,8519,forward,0.39560439560439553,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE*CY*
 MK115581.1,nef,8653,9274,forward,0.6162601626016186,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPMSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPMSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC*H*
-MK115690.1,gag,777,2286,forward,0.2522000000000002,MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ,MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ*
-MK115690.1,pol,2078,5141,forward,0.23928215353938187,FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*KMAQFSKTPYIYFRES*
-MK115690.1,vif,5034,5613,forward,0.5416666666666667,MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH,MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH*
-MK115690.1,vpr,5552,5843,forward,0.34375,MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS,MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS*
-MK115690.1,tat_exon1,5823,6039,forward,0.6833333333333336,MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ,MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ
-MK115690.1,rev_exon1,5962,6040,forward,1.1153846153846154,MAGRSGDNDEDLLKTVRFIKLLYQSS,MAGRSGDNDEDLLKTVRFIKLLYQSS
-MK115690.1,vpu,6054,6390,forward,0.9555555555555557,MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL,MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL*CYRKIVGYSLLWGTCVERSKHHSILCIRC*
-MK115690.1,env,6217,8800,forward,0.7447337278106514,MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ,MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ*
-MK115690.1,tat_exon2,8381,8489,forward,1.1392857142857142,RPTSQPRGDPTGPKEPETKVESKTETDPLT,RPTSQPRGDPTGPKEPETKVESKTETDPLT*WMDS*
-MK115690.1,rev_exon2,8382,8658,forward,0.8681318681318682,DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE,DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE*
-MK115690.1,nef,8801,9425,forward,0.5563380281690138,MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN,MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN*NC*
+MK115690.1,gag,777,2292,forward,0.1894,MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ,MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ*R*
+MK115690.1,pol,2078,5090,forward,0.13958125623130613,FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+MK115690.1,vif,5034,5622,forward,0.40104166666666674,MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH,MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH*SF*
+MK115690.1,vpr,5552,5846,forward,0.5576923076923082,MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS,MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS*S
+MK115690.1,tat_exon1,5823,6039,forward,0.45833333333333326,MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ,MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ
+MK115690.1,rev_exon1,5962,6040,forward,0.6923076923076923,MAGRSGDNDEDLLKTVRFIKLLYQSS,MAGRSGDNDEDLLKTVRFIKLLYQSS
+MK115690.1,vpu,6054,6300,forward,0.552439024390244,MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL,MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL*
+MK115690.1,env,6217,8800,forward,0.5558411214953274,MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ,MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ*
+MK115690.1,tat_exon2,8381,8489,forward,0.28666666666666596,RPTSQPRGDPTGPKEPETKVESKTETDPLT,RPTSQPRGDPTGPKEPETKVESKTETDPLT*WMDS*
+MK115690.1,rev_exon2,8382,8658,forward,0.4505494505494505,DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE,DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE*
+MK115690.1,nef,8801,9425,forward,0.6089430894308867,MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN,MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN*NC*
 MK115571.1,gag,579,2079,forward,0.2571999999999999,MGARASILSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSVNVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE,MGARASILSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSVNVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE*
 MK115571.1,pol,1871,4883,forward,0.14755732801595212,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEAFLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEAFLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 MK115571.1,vif,4827,5406,forward,0.36979166666666674,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH*
@@ -120,17 +120,17 @@ MK115488.1,env,6138,8679,forward,0.4941588785046729,MRVKGIRKNCQRLWRWGTMLLGMLMICS
 MK115488.1,tat_exon2,8260,8356,forward,0.28666666666666596,RPTSQPRGDPTGPKESKKKVEKETETDQFD,RPTSQPRGDPTGPKESKKKVEKETETDQFD**
 MK115488.1,rev_exon2,8261,8546,forward,0.4285714285714286,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVSLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVSLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE*CY*
 MK115488.1,nef,8680,9301,forward,0.6162601626016186,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDGEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPTSLHGVEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDGEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPTSLHGVEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC*H*
-MK115030.1,gag,176,1685,forward,0.34274509803921616,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*
-MK115030.1,pol,1477,4489,forward,0.25557749259624885,FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*
-MK115030.1,vif,4433,5012,forward,0.46354166666666674,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*
-MK115030.1,vpr,4951,5242,forward,0.39583333333333326,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*
-MK115030.1,tat_exon1,5222,5441,forward,0.5416666666666667,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*
-MK115030.1,rev_exon1,5361,5439,forward,0.5384615384615385,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
-MK115030.1,vpu,5453,5699,forward,0.4814814814814814,MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM,MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM*
-MK115030.1,env,5616,8217,forward,0.545964912280702,MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL,MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*
-MK115030.1,tat_exon2,7798,7891,forward,0.8,RPSSQPRGDPTGPKEQKKEVERETEAHPRD,RPSSQPRGDPTGPKEQKKEVERETEAHPRD*
-MK115030.1,rev_exon2,7799,8084,forward,0.4945054945054945,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*CS*
-MK115030.1,nef,8218,8866,forward,0.6995098039215688,MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*
+MK115030.1,gag,176,1685,forward,0.22580000000000022,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*
+MK115030.1,pol,1477,4567,forward,0.21934197407776668,FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*NMEQFSKTPYAYFKESSEMGLQTSL*
+MK115030.1,vif,4433,5012,forward,0.38020833333333326,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*
+MK115030.1,vpr,4951,5245,forward,0.5192307692307698,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*L
+MK115030.1,tat_exon1,5222,5441,forward,0.5972222222222223,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*
+MK115030.1,rev_exon1,5361,5439,forward,0.6538461538461537,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
+MK115030.1,vpu,5453,5699,forward,0.780487804878049,MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM,MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM*
+MK115030.1,env,5616,8217,forward,0.5768691588785053,MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL,MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*
+MK115030.1,tat_exon2,7798,7891,forward,0.4866666666666659,RPSSQPRGDPTGPKEQKKEVERETEAHPRD,RPSSQPRGDPTGPKEQKKEVERETEAHPRD*
+MK115030.1,rev_exon2,7799,8075,forward,0.4285714285714286,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*
+MK115030.1,nef,8218,8866,forward,0.7959349593495859,MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*
 MK115498.1,gag,663,2169,forward,0.2571999999999999,MGARASILSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWTTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSANVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE,MGARASILSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWTTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSANVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE*R*
 MK115498.1,pol,1955,4967,forward,0.14755732801595212,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 MK115498.1,vif,4911,5490,forward,0.35416666666666674,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHIVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHIVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH*
@@ -153,28 +153,28 @@ MK115211.1,env,5687,8198,forward,1.2061915887850478,MHSFNCRGEFFYCNTTQLFNSTWNSTTG
 MK115211.1,tat_exon2,7779,7872,forward,0.4866666666666659,RPSSQPRGDPTGPKESEKKVERETETDPVT,RPSSQPRGDPTGPKESEKKVERETETDPVT*
 MK115211.1,rev_exon2,7780,8056,forward,0.46153846153846145,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGCGTSGTQGVGSPQVLVESPAVLEPGTKE,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGCGTSGTQGVGSPQVLVESPAVLEPGTKE*
 MK115211.1,nef,8199,8838,forward,0.6943089430894234,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDPDKEVLVWKFDSRLAFRHVAREIHPEYYKNC,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDPDKEVLVWKFDSRLAFRHVAREIHPEYYKNC*QRAF*
-MK115158.1,gag,316,1819,forward,0.1918000000000002,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP*SQ*
-MK115158.1,pol,1611,4623,forward,0.1992023928215354,FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED,FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED*
-MK115158.1,vif,4567,5149,forward,0.42812499999999987,MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH,MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH*
-MK115158.1,vpr,5088,5382,forward,0.44230769230769296,MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS,MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS*T
-MK115158.1,tat_exon1,5359,5578,forward,0.5694444444444444,MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ*
-MK115158.1,rev_exon1,5498,5579,forward,0.7153846153846151,MAGRSGDSDEELLKITRTIKFLYQNSE,MAGRSGDSDEELLKITRTIKFLYQNSE
-MK115158.1,vpu,5590,5860,forward,0.7073170731707319,MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL,MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL*
-MK115158.1,env,5753,8315,forward,0.5410046728971969,MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL,MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL*
-MK115158.1,tat_exon2,7896,7989,forward,0.4866666666666659,RPSSQPRGDPTGPKESEKKVERETETDPVT,RPSSQPRGDPTGPKESEKKVERETETDPVT*
-MK115158.1,rev_exon2,7897,8173,forward,0.4945054945054945,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE*
-MK115158.1,nef,8316,8940,forward,0.6943089430894234,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC*
-MK114705.1,gag,532,2053,forward,0.339019607843138,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ*R*
-MK114705.1,pol,1839,4851,forward,0.23652517275419527,FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-MK114705.1,vif,4795,5383,forward,0.31770833333333326,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH*NF*
-MK114705.1,vpr,5313,5598,forward,0.43437499999999996,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS*
-MK114705.1,tat_exon1,5578,5797,forward,0.41666666666666674,MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ,MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ*
-MK114705.1,rev_exon1,5717,5798,forward,0.75,MAGRSGDRDEDLLETVRFIKFLYQNSK,MAGRSGDRDEDLLETVRFIKFLYQNSK
-MK114705.1,vpu,5809,6055,forward,0.5185185185185186,MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL,MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL*
-MK114705.1,env,5972,8549,forward,0.567251461988304,MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL,MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL*
-MK114705.1,tat_exon2,8130,8226,forward,1.0,RPPAQPQGDPTGPKKSKKEVEKETETDQCD,RPPAQPQGDPTGPKKSKKEVEKETETDQCD**
-MK114705.1,rev_exon2,8131,8407,forward,0.6263736263736264,DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE,DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE*
-MK114705.1,nef,8550,9138,forward,1.0289215686274478,MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK,MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK*CVPVCCVTLVTRDPSDHFSQRGKSLAVAPEQGPESESRTRGDLSTQDSAC*
+MK115158.1,gag,316,1819,forward,0.3517171717171721,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP*SQ*
+MK115158.1,pol,1611,4623,forward,0.26447105788423153,FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED,FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED*
+MK115158.1,vif,4567,5149,forward,0.5668393782383419,MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH,MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH*
+MK115158.1,vpr,5088,5379,forward,0.46875,MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS,MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS*
+MK115158.1,tat_exon1,5359,5578,forward,0.5416666666666667,MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ*
+MK115158.1,rev_exon1,5498,5579,forward,0.75,MAGRSGDSDEELLKITRTIKFLYQNSE,MAGRSGDSDEELLKITRTIKFLYQNSE
+MK115158.1,vpu,5590,5860,forward,0.5308641975308646,MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL,MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL*
+MK115158.1,env,5753,8342,forward,0.5740566037735857,MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL,MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL*NGRHILKT*
+MK115158.1,tat_exon2,7896,7992,forward,0.6935483870967742,RPSSQPRGDPTGPKESEKKVERETETDPVT,RPSSQPRGDPTGPKESEKKVERETETDPVT*R
+MK115158.1,rev_exon2,7897,8173,forward,0.5274725274725274,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE,DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE*
+MK115158.1,nef,8316,8994,forward,0.6674757281553398,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC,MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC*QRAFYKGLSARDFPGEA*
+MK114705.1,gag,532,2053,forward,0.21479999999999988,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ*R*
+MK114705.1,pol,1839,4851,forward,0.17248255234297116,FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+MK114705.1,vif,4795,5383,forward,0.34375,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH*NF*
+MK114705.1,vpr,5313,5601,forward,0.46153846153846234,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS*T
+MK114705.1,tat_exon1,5578,5797,forward,0.6222222222222225,MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ,MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ*
+MK114705.1,rev_exon1,5717,5798,forward,0.8653846153846154,MAGRSGDRDEDLLETVRFIKFLYQNSK,MAGRSGDRDEDLLETVRFIKFLYQNSK
+MK114705.1,vpu,5809,6055,forward,0.7963414634146342,MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL,MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL*
+MK114705.1,env,5972,8549,forward,0.5660046728971964,MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL,MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL*
+MK114705.1,tat_exon2,8130,8226,forward,0.9733333333333327,RPPAQPQGDPTGPKKSKKEVEKETETDQCD,RPPAQPQGDPTGPKKSKKEVEKETETDQCD**
+MK114705.1,rev_exon2,8131,8407,forward,0.5494505494505495,DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE,DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE*
+MK114705.1,nef,8550,9138,forward,0.4593495934959331,MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK,MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK*CVPVCCVTLVTRDPSDHFSQRGKSLAVAPEQGPESESRTRGDLSTQDSAC*
 MK114856.1,gag,120,2022,forward,1.871000000000001,MTKTLLVQNANPDCKTILKALGPAATLEEMMTACQKVRRPGHKAKVLAEAMSQATGAANIMMQRGNFKNQRKPVKCFNCGKEKHIAKNCKAPKKKGC,MLHISSCFLPVLGLSGWTRSEPGSSLAN*GTHCLSLNKACLECFK*CVPVCCVTLVTRDPSGSNLVQPERPSSSGARTGT*KRK*NQRRSLDAGLGLLKRARQEAKGGDW*VRHF*LAEARRRKIGARASVLSRGELDR*EKIQLRPRRKKKYRLKHIV*ASKELERFAVNPGLLETSGGCKQILEQLQPSLQTRSEELRSLYNTVATLYYVHQKIDVKDTKEALDKVEEEQNKSKKKAQQAAADTRNRGQTSQNFPIVQNLQGQIVHQAISPRTLNA*VKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVSRHQAAMQMLKKVINEEAAE*DRLHPVHARPIAPGQIREPKRSDIARTTSTLQEQIR*MTHNPPIPVRKIYKR*IILGLNKIVKMYSPTSILDIKQRPKEPFRDYVDQFYKTLRAKQATQKVKN*MTKTLLVQNANPDCKTILKALGPAATLEEMMTACQKVRRPGHKAKVLAEAMSQATGAANIMMQRGNFKNQRKPVKCFNCGKEKHIAKNCKAPKKKGC*KYRKERHQMKNCTKRQANFLKKIWPSHKGRPENFPQSRPEIPQSRPEPTAPPAPPEKSFKFEEATTPSQKQETIDKELYPLTSLRSLFGNDPSSQ*
 MK114856.1,pol,1787,4892,forward,2.003988035892324,ASQIYAKIKVKQLCKLLKRTKALTEVVPLTEEAELELAENRKILKDPVHRAYYDPAKDLIAELQKQREGQWTYQIYQKPFKNLKTEKYARTKGAHTNDVKQLTEAVQKISTESIVI,FFKENLAFPQRKARELSSKPTRNSSEQTRANSPTSPSRKELQV*RSNNSLSEAGDNRQGAVSSNFPQITLWQRPIVTIKIREQLKKALLNTGADDTVLEDIDLPRK*KPKMIRRIRSFIKVRQYEQVPIEISRHKAISTVLVGPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPRMDGPKVKQ*PLTEEKIKALVEICTEIEKEKKISKIRPENPYNTPVFAIKKKDGTK*KKLVDFRELNKKTQDF*EIQLSIPHPAKLKKKKSVTVLDVGDAYFSVPLDKDFKKYTAFTIPSINNETPKIRYQYNVLPQR*KRSPAIFQSSMTKILEPFRKTNPDIVIYQYIDDLYVRSDLEIRQHRTKVKELRQHLMR*RFTTPDKKHQKEPPFL*MRYELHPDKWTVQPIVLPEKES*TVNDIQKLVRKLN*ASQIYAKIKVKQLCKLLKRTKALTEVVPLTEEAELELAENRKILKDPVHRAYYDPAKDLIAELQKQREGQWTYQIYQKPFKNLKTEKYARTKGAHTNDVKQLTEAVQKISTESIVI*RRTPKFRLPIQKET*ET*WTDYWQAT*IPK*EFVNTPPLVKL*YQLEKEPIIRAETFYVDKAANKDNKSRKARYVTDRRRQKVVTINDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKKKVYLA*VPAHKRIKRNEQVNKLVSARIKKVLFLDKIEKAQEDHKKYHSN*RTMASNFNLPPIVAKEIVASCDKCQLKKEAMHRQVDCSPGIWQLDCTHLEEKIILVAVHVASRYIEAEVIPAETRQETAYFILKLARRWPVKTIHTDNGRNFTSNTVKAAC**AKIKQEFSIPYNPQSQEVVKSINNELKKIIRQVKDQAKHLKTAVQMAVFIHNFKRKGGIEGYSAEERIVDIIATEIQTKELQKQITKIQNFQVYYKDSRDPL*KGPAKLLWKGEKAVVIQDNSDIKVVPRRKAKIIKDYKKQMASDDCVASRQDED*NMEKFSKIPYVYFKESQEIGL*
 MK114856.1,vif,4791,5349,forward,1.928125,MIVWQVDRMKIRTWKSLVKYHMYISKKAKK,MIVWQVDRMKIRTWKSLVKYHMYISKKAKK*AYRHHYETTHPRISSEVHIPLGGARLVITTY*GLHTGEKDWHLGQGVSIEWRKRRYSTQVDPDLADHLIHVHYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVRSLQYLALTALITPKKIKPPLPSVKKLTEDR*NKPQKTKGHRKSHTMNRH*
@@ -186,17 +186,17 @@ MK114856.1,env,5953,8557,forward,1.8896028037383144,MTNCSFNITTEIRDKVRKEYALFYKLDV
 MK114856.1,tat_exon2,8102,8198,forward,0.8,RPSSQPQEDQTGPKE,RPSSQPQEDQTGPKE*KKKVKRETEADPED**
 MK114856.1,rev_exon2,8103,8379,forward,1.3725274725274725,ILTTHLRRPAKPVPFQLPPLKRLTLDCAEDCANSRTQEVRDPQVLVESPAVLNSGTKE,DPPPNPKKTRQARKNRRRR*KERQRQIQKISD*ILTTHLRRPAKPVPFQLPPLKRLTLDCAEDCANSRTQEVRDPQVLVESPAVLNSGTKE*
 MK114856.1,nef,8549,9176,forward,2.0414634146341464,MSLHRMEDSEGEVLMWKFDSSLAFHHRAREQHPEYYKDC,MAR*PAVKERIERVNPRPAAKKEQAEPAAAKVRAASRDLEKYRAITSSNTSTTNAACA*LEAQEEEEVGFPVRPQVPLRPMTYKAALNLSHFLKEKGGLEGLI*SQRRQEILDLWVYHTQGYFPDWQNYTPGPGVRNPLTFGWCFKLVPVDPDQVEKANEGENNCLLHPMSLHRMEDSEGEVLMWKFDSSLAFHHRAREQHPEYYKDC*
-MK115009.1,gag,302,1907,forward,1.8788235294117652,MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC,MGARASVLSGGKLDR*EKIYLRPEGKKKYRLKHIV*ASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPLSPRTLNA*VKVIEEKAFSPEVIPMFSALSERATPQDLNTMLNTVRGHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRGSDIAGTTSTLQEQIR*MTHNPPIPVGEIYKRWIILRLNKIVRMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC*KCRKERHQMKDCTKRPD*DG*FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*GRGNSSSSEAGDERPRTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEINLPGK*
-MK115009.1,pol,1613,4703,forward,1.9012833168805523,AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED,FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*GRGNSSSSEAGDERPRTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEINLPGK*KPKMIKRIRSFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKSGIDSPRVKQWPLTEEKIKALIEICAEIEKEKKITKIRPENPYNTPVFAIKKKDSTK*KKLVDFRELNKRTQDF*EVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPEVKYQYNVLPQR*KRSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLR*GLTTPDKKHQKKPPFL*ISYELHPDK*TVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQRRDQ*TYQIYQEPFKNLKTEKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*KMWWTKYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVNKAANRKTKLRKAEYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIEGNEQVDKLVSNRIRRVLFLDRIDKAQEEHEKYHSN*RAMASNFNLPPVVAKEIVASCDKCQLKGEPMHRQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGR*PVKIIHTDNGSNFTSTTVKAAC**AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED*NIEQFSKTPYAYFKESSEIGLQTSL*
+MK115009.1,gag,302,1715,forward,1.8444000000000005,MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC,MGARASVLSGGKLDR*EKIYLRPEGKKKYRLKHIV*ASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPLSPRTLNA*VKVIEEKAFSPEVIPMFSALSERATPQDLNTMLNTVRGHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRGSDIAGTTSTLQEQIR*MTHNPPIPVGEIYKRWIILRLNKIVRMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC*KCRKERHQMKDCTKRPD*DG*FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*
+MK115009.1,pol,1613,4703,forward,1.89531405782652,AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED,FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*GRGNSSSSEAGDERPRTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEINLPGK*KPKMIKRIRSFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKSGIDSPRVKQWPLTEEKIKALIEICAEIEKEKKITKIRPENPYNTPVFAIKKKDSTK*KKLVDFRELNKRTQDF*EVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPEVKYQYNVLPQR*KRSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLR*GLTTPDKKHQKKPPFL*ISYELHPDK*TVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQRRDQ*TYQIYQEPFKNLKTEKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*KMWWTKYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVNKAANRKTKLRKAEYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIEGNEQVDKLVSNRIRRVLFLDRIDKAQEEHEKYHSN*RAMASNFNLPPVVAKEIVASCDKCQLKGEPMHRQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGR*PVKIIHTDNGSNFTSTTVKAAC**AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED*NIEQFSKTPYAYFKESSEIGLQTSL*
 MK115009.1,vif,4590,5148,forward,2.064583333333333,MIVWQVDRMRIRT,MIVWQVDRMRIRT*NSLVKHHMHISKKAQR*VYRHHYESHNPKTSSEVHIPLEEARLVIKTY*GLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKRSHTINGH*
-MK115009.1,vpr,5087,5378,forward,1.2177083333333347,MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT,MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT*AEVEAIIRTLQQLLFIHFRIRCQHSRIGIIRQRRARNRASRS*
-MK115009.1,tat_exon1,5412,5574,forward,1.151388888888889,MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ,MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ
-MK115009.1,rev_exon1,5497,5575,forward,0.6538461538461537,MAGRSRDSDEELLTAVRIIKRLYQSS,MAGRSRDSDEELLTAVRIIKRLYQSS
-MK115009.1,vpu,5589,5868,forward,0.7098765432098768,MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP,MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP*DSNDM*CQQLVGHSLL*
-MK115009.1,env,5752,8353,forward,1.875672514619878,MKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD,MRVTRTKRNYPHLWR*GILFLKIVMICSANNL*VTVYYKVPV*KEATTTLFCASDAKAYETEKHNV*ATHACVPTDPSPQEVALENVTETFNM*KNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDNLNLTCPNNNTCSNNTNYNMKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD*NDTLKQIVIKLKEKFKNKTIVFTQSSGEDPEIVMHSFNCREEFFYCNTTQLFNST*NNST*NSTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQRQIRCSSNITGLLLVRDGRSNNSSNDTETFRPRGRDMKDN*RSKLYKYKVVKIKPLRIAPTHAKRRVVQKEKRAIRLEAFFLRFLRAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQAKVLALERYLKDQQLLRI*SCSGKLICTTNVPWNISWSPRWNRSLDKI*TNMT*KQ*EKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQ*L*YIKIFIIIVRGLISLRIVFTILSIVNKVRQGYSPLSLQTLLPTQRGPDRPERTEERGRKKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLKDLLLIAARIVELLGRRK*EALKY**NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*
-MK115009.1,tat_exon2,7934,8027,forward,1.0,RPSSQPREDPTGPKEQKKEVERKTEAHPRD,RPSSQPREDPTGPKEQKKEVERKTEAHPRD*
+MK115009.1,vpr,5087,5381,forward,1.0679487179487188,MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT,MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT*AEVEAIIRTLQQLLFIHFRIRCQHSRIGIIRQRRARNRASRS*L
+MK115009.1,tat_exon1,5412,5574,forward,1.0958333333333334,MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ,MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ
+MK115009.1,rev_exon1,5497,5575,forward,0.7692307692307692,MAGRSRDSDEELLTAVRIIKRLYQSS,MAGRSRDSDEELLTAVRIIKRLYQSS
+MK115009.1,vpu,5589,5835,forward,0.9975609756097563,MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP,MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP*DSNDM*
+MK115009.1,env,5752,8353,forward,1.878154205607472,MKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD,MRVTRTKRNYPHLWR*GILFLKIVMICSANNL*VTVYYKVPV*KEATTTLFCASDAKAYETEKHNV*ATHACVPTDPSPQEVALENVTETFNM*KNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDNLNLTCPNNNTCSNNTNYNMKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD*NDTLKQIVIKLKEKFKNKTIVFTQSSGEDPEIVMHSFNCREEFFYCNTTQLFNST*NNST*NSTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQRQIRCSSNITGLLLVRDGRSNNSSNDTETFRPRGRDMKDN*RSKLYKYKVVKIKPLRIAPTHAKRRVVQKEKRAIRLEAFFLRFLRAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQAKVLALERYLKDQQLLRI*SCSGKLICTTNVPWNISWSPRWNRSLDKI*TNMT*KQ*EKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQ*L*YIKIFIIIVRGLISLRIVFTILSIVNKVRQGYSPLSLQTLLPTQRGPDRPERTEERGRKKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLKDLLLIAARIVELLGRRK*EALKY**NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*
+MK115009.1,tat_exon2,7934,8027,forward,0.6866666666666661,RPSSQPREDPTGPKEQKKEVERKTEAHPRD,RPSSQPREDPTGPKEQKKEVERKTEAHPRD*
 MK115009.1,rev_exon2,7935,8211,forward,1.3065934065934066,ILSTHLGRPAEPVPLQLPPLERLTLNCGENCRTSRTQKVRSTEVLVESPAVLESGNKE,DPPPNPERTRQARKNRRKR*KERQRHIHEISA*ILSTHLGRPAEPVPLQLPPLERLTLNCGENCRTSRTQKVRSTEVLVESPAVLESGNKE*
-MK115009.1,nef,8609,8996,forward,1.7137254901960792,MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR,MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR*CFKLVPVDPDKVEEASVRENNCLLSPENLHRMEDEHREVLQWRFDSRLAFHHIARELHPEYYKDC*
+MK115009.1,nef,8609,8996,forward,1.6390243902439028,MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR,MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR*CFKLVPVDPDKVEEASVRENNCLLSPENLHRMEDEHREVLQWRFDSRLAFHHIARELHPEYYKDC*
 MK115387.1,gag,292,1795,forward,0.20799999999999996,MGARASVLSGGELDKWEKIRLRPGGKKRYKLKHIVWASRELERFAVNPGLLETTEGCKQILEQLQPSLPTGSEELRSLFNTVATLYCVHKRIEVQDTKEALEKIEEEQNKSKKKAQQAVADTGSTSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPVAPGQMREPRGSDIAGTTSTLQEQIAWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYKVLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSNIIMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSSKGRPGNFLQSRPEPTAPPEESFRFGEETATPPQKQEPVDKEVYPLASLKSLFGNDPSSQ,MGARASVLSGGELDKWEKIRLRPGGKKRYKLKHIVWASRELERFAVNPGLLETTEGCKQILEQLQPSLPTGSEELRSLFNTVATLYCVHKRIEVQDTKEALEKIEEEQNKSKKKAQQAVADTGSTSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPVAPGQMREPRGSDIAGTTSTLQEQIAWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYKVLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSNIIMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSSKGRPGNFLQSRPEPTAPPEESFRFGEETATPPQKQEPVDKEVYPLASLKSLFGNDPSSQ*
 MK115387.1,pol,1587,4599,forward,0.13160518444665992,FFREDLAFLQGKARELSSEQTRANSPTRGELQVWGGDSNSSSEAGAGGQGSVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVQLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSITVLDVGDAYFSIPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLKGAKALTEVIQLTEEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARTRGTHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTSRGRQKVVSLTDTTNQKTELQAICLALQDSGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIEQLIKKERVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHNNWRAMASDFNLPPVVAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKAIHTDNGTNFTSATVKAACWWAGIKQECGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDNRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFLQGKARELSSEQTRANSPTRGELQVWGGDSNSSSEAGAGGQGSVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVQLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSITVLDVGDAYFSIPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLKGAKALTEVIQLTEEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARTRGTHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTSRGRQKVVSLTDTTNQKTELQAICLALQDSGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIEQLIKKERVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHNNWRAMASDFNLPPVVAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKAIHTDNGTNFTSATVKAACWWAGIKQECGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDNRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 MK115387.1,vif,4543,5122,forward,0.3041666666666665,MENRWQVMIVWQVDRMRISTWKSLVKHHMYISKKAQGWFYRHHYENPHPRISSEVHIPLGDARLVITTYWGLHTGERDWHLGQGVSIECRERKYSTQVTPDLADQLIHLYYFDCFAESAIREAILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSVTKLTEDRWNKPQKTKGHRGSQTMNGH,MENRWQVMIVWQVDRMRISTWKSLVKHHMYISKKAQGWFYRHHYENPHPRISSEVHIPLGDARLVITTYWGLHTGERDWHLGQGVSIECRERKYSTQVTPDLADQLIHLYYFDCFAESAIREAILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSVTKLTEDRWNKPQKTKGHRGSQTMNGH*
@@ -219,17 +219,17 @@ MK115491.1,env,5952,8493,forward,0.49135514018691584,MRVKGIRKNCQRLWRWGTMLLGMLMIC
 MK115491.1,tat_exon2,8074,8170,forward,0.28666666666666596,RPTSQPRGDPTGPKESKKKVEKETETDQFD,RPTSQPRGDPTGPKESKKKVEKETETDQFD**
 MK115491.1,rev_exon2,8075,8360,forward,0.39560439560439553,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE*CY*
 MK115491.1,nef,8494,9115,forward,0.6162601626016186,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPMSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPMSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC*H*
-MK116110.1,gag,291,1650,forward,2.122400000000001,MVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA,MLTGLYILTILFNPRITHLL*ISPTGIGGLFVIHPICS*RVLVVPAISLPLGSLIWPGATGPACTGCNLSHSAASSLMVSFNICIAA*CPPTVFSMVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA*CTICPWRFCTIG*FWLTWLLFPAPAAACCAFILLLFCSSSILSSAPLVSCISIL*CIQ*RTATVLYNDLSSSDPVWRDGCSCPSICLQPSDVSNRPGLTANRSSSLLAHTRCFNLYFFFPPGLNRIFSHWSNFPPLNTDALAPISLLLASAR*KLFWRTHQSPKQ*AK*IQLP**CRKAILGTKRRLLSVSTVVK*GI*QKIAGPPGERAVGNVDRKDTR*KIVVRDRLIF*GNSGLPTRGGQGISFRADQSQQPHQRRASGLGKRQQLPLRSRSR*TGNYIP*LPSNHSLATTPRLNKSRGATKGSSIRYRSR*
-MK116110.1,pol,1393,4405,forward,0.19182452642073788,FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED,FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED*
-MK116110.1,vif,4349,4928,forward,0.43229166666666674,MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH,MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH*
-MK116110.1,vpr,4867,5161,forward,0.5576923076923082,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP*P
-MK116110.1,tat_exon1,5138,5357,forward,0.5972222222222225,MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ,MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ*
-MK116110.1,rev_exon1,5277,5355,forward,0.6923076923076923,MAGRSGDSDEDLLKAVRLIKILYQSS,MAGRSGDSDEDLLKAVRLIKILYQSS
-MK116110.1,vpu,5369,5615,forward,0.75609756097561,MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL,MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL*
-MK116110.1,env,5532,8073,forward,0.5280373831775704,MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL,MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL*
-MK116110.1,tat_exon2,7654,7750,forward,0.4866666666666659,RPASQPRGDPTGPKESKKTVERETETDPHA,RPASQPRGDPTGPKESKKTVERETETDPHA**
+MK116110.1,gag,0,1557,forward,2.1186000000000007,MVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA,PESESRTREVLSTQDSAC*ALWPGPPTP*HAVIISSSVAAGPNAFKIVLQSGFAFWTNKVSVIQFFTSCEACSALRVL*NRST*SLKGSFGPCFMSKMLTGLYILTILFNPRITHLL*ISPTGIGGLFVIHPICS*RVLVVPAISLPLGSLIWPGATGPACTGCNLSHSAASSLMVSFNICIAA*CPPTVFSMVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA*CTICPWRFCTIG*FWLTWLLFPAPAAACCAFILLLFCSSSILSSAPLVSCISIL*CIQ*RTATVLYNDLSSSDPVWRDGCSCPSICLQPSDVSNRPGLTANRSSSLLAHTRCFNLYFFFPPGLNRIFSHWSNFPPLNTDALAPISLLLASAR*KLFWRTHQSPKQ*AK*IQLP**CRKAILGTKRRLLSVSTVVK*GI*QKIAGPPGERAVGNVDRKDTR*KIVVRDRLIF*GNSGLPTRGGQGISFRADQSQQPHQRRASGLGKRQQLPLRSRSR*TGNYIP*
+MK116110.1,pol,1393,4405,forward,0.19680957128614174,FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED,FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED*
+MK116110.1,vif,4349,4928,forward,0.546875,MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH,MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH*
+MK116110.1,vpr,4867,5158,forward,0.48333333333333317,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP,MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP*
+MK116110.1,tat_exon1,5138,5357,forward,0.6111111111111112,MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ,MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ*
+MK116110.1,rev_exon1,5277,5355,forward,0.5769230769230769,MAGRSGDSDEDLLKAVRLIKILYQSS,MAGRSGDSDEDLLKAVRLIKILYQSS
+MK116110.1,vpu,5369,5615,forward,0.48124999999999996,MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL,MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL*
+MK116110.1,env,5532,8073,forward,0.5259128386336873,MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL,MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL*
+MK116110.1,tat_exon2,7654,7750,forward,0.5,RPASQPRGDPTGPKESKKTVERETETDPHA,RPASQPRGDPTGPKESKKTVERETETDPHA**
 MK116110.1,rev_exon2,7655,7940,forward,0.48241758241758226,DPLPSPEGTRQARRNRRRRWRERQRQIHTLSNRILTTFLGRPEEPVPLQLPPLERLTLDCSEDCGTSGTQGVGNPQTLVESPTILESGTKKKCC,DPLPSPEGTRQARRNRRRRWRERQRQIHTLSNRILTTFLGRPEEPVPLQLPPLERLTLDCSEDCGTSGTQGVGNPQTLVESPTILESGTKKKCC*
-MK116110.1,nef,8074,8695,forward,0.5601626016260086,MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC,MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC*
+MK116110.1,nef,8074,8695,forward,0.4668269230769231,MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC,MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC*
 MK115527.1,gag,683,2189,forward,0.2571999999999999,MGARASILSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWTTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSANVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE,MGARASILSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWTTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSANVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE*R*
 MK115527.1,pol,1975,4987,forward,0.14755732801595212,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 MK115527.1,vif,4931,5510,forward,0.35416666666666674,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHIVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPNLADQLIHLYYFDCFSESAIRNAILGHIVSPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH*
@@ -263,17 +263,17 @@ MK115518.1,env,6170,8711,forward,0.49018691588785046,MRVKGIRKNCQRLWRWGTMLLGMLMIC
 MK115518.1,tat_exon2,8292,8388,forward,0.28666666666666596,RPTSQPRGDPTGPKESKKKVEKETETDQFD,RPTSQPRGDPTGPKESKKKVEKETETDQFD**
 MK115518.1,rev_exon2,8293,8578,forward,0.39560439560439553,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE,DPPPSPEGTRQARRNRRRRWRKRQRQISSISERILGTFLGRPAEPVPLPLPPLERLTLDCNKDCGTSGTQGVGNPQTLVESPAVLDSGAKE*CY*
 MK115518.1,nef,8712,9333,forward,0.6162601626016186,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPTSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC,MGGKWSKSSGGGWPAVRERMRRTEPAAEGVGAVSRDLERHGAVTSSNTAATNADCAWLEAQEEDSEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPEEANQGENNCLLHPTSLHGMEDPEKEVLMWKFDSRLAFHHMAREKHPEYYKDC*H*
-MK115065.1,gag,221,1736,forward,0.3545098039215693,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*K*
-MK115065.1,pol,1522,4534,forward,0.2466929911154987,FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED,FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*
-MK115065.1,vif,4478,5057,forward,0.46354166666666674,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*
-MK115065.1,vpr,4996,5287,forward,0.36458333333333326,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*
-MK115065.1,tat_exon1,5267,5486,forward,0.5416666666666667,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*
-MK115065.1,rev_exon1,5406,5484,forward,0.5384615384615385,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
-MK115065.1,vpu,5498,5744,forward,0.4444444444444444,MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM,MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM*
-MK115065.1,env,5661,8262,forward,0.5424561403508774,MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL,MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*
-MK115065.1,tat_exon2,7843,7936,forward,0.8,RPSSQPRGDPTGPKEQKKEVERETEAHPRD,RPSSQPRGDPTGPKEQKKEVERETEAHPRD*
-MK115065.1,rev_exon2,7844,8129,forward,0.4945054945054945,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*CS*
-MK115065.1,nef,8263,8911,forward,0.705392156862745,MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*
+MK115065.1,gag,221,1736,forward,0.24380000000000024,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP,MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*K*
+MK115065.1,pol,1522,4534,forward,0.20438683948155534,FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED,FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*
+MK115065.1,vif,4478,5057,forward,0.38020833333333326,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH,MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*
+MK115065.1,vpr,4996,5290,forward,0.4807692307692313,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS,MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*L
+MK115065.1,tat_exon1,5267,5486,forward,0.5972222222222223,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ,MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*
+MK115065.1,rev_exon1,5406,5484,forward,0.6538461538461537,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
+MK115065.1,vpu,5498,5744,forward,0.751219512195122,MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM,MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM*
+MK115065.1,env,5661,8262,forward,0.5663551401869167,MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL,MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*
+MK115065.1,tat_exon2,7843,7936,forward,0.4866666666666659,RPSSQPRGDPTGPKEQKKEVERETEAHPRD,RPSSQPRGDPTGPKEQKKEVERETEAHPRD*
+MK115065.1,rev_exon2,7844,8120,forward,0.4285714285714286,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE,DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*
+MK115065.1,nef,8263,8911,forward,0.7471544715447078,MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*
 MK115464.1,gag,527,2297,forward,1.495,MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSNIIMMQRGNFRNQRKTVKCFNCGKERHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLRKIWPSSKGRPRNFLQSRPEPTAPPEESFRFREETATPPQKQEPVDKEVYPLASLKSLFGNDPSSQ,MLQAIPGLRVGPAGSHPFALTSLSASCCHQSQSPGCSGATARTGT*KRK*NQRSSLDAGLGLLKRARQEARGGDW*VRQF*LAEARRREISARASVLSGGELDKWEKIRLRPGGKKRYKLKHIVWASRELERFAVNPGLLETTEGCKQILEQLQPSLPTGSEELRSLFNTVATLYCVHKRIEVQDTKEALEKIEEEQNKSKKKAQQAVADKGSTSQVSQNYPIVQNLQGQMVHQAISPRTLNA*VKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAE*DRVHPVHAGPVAPGQMREPRGSDIAGTTSTLQEQIA*MTSNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYKVLRAEQASQDVKN*MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSNIIMMQRGNFRNQRKTVKCFNCGKERHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLRKIWPSSKGRPRNFLQSRPEPTAPPEESFRFREETATPPQKQEPVDKEVYPLASLKSLFGNDPSSQ*
 MK115464.1,pol,2089,5101,forward,1.8783649052841465,AKIKQECGIPYNPQSQEVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDNRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIKDYGKQMAGDDCVASRQDED,FFKEDLAFLQRKAKELSSEQTRANSPTRRELQV*GGDSNSSSEAGAGGQRSVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEISLPGR*KPKMIEGIGGFIKVRQYDQITIEICGHKAIGTVLVGPTPVNIIGRNLLTQISCTLNFPISPIETVPVQLKPGIDSPKVKQWPLTEEKIKALVEICTEMEKEKKISKIRPENPYNTPVFAIKKKDSTK*RKLVDFKELNKRTQDF*EVQLRIPHPARLKKKKSITVLDVGDAYFSIPLDKDFKKYTAFTIPSINNKTPEIRYQYNVLPQG*KRSPAIFQSSMIKILEPFRKQNPDIVIYQYIDDLYVRSDLEIRQHRTKIEELRQHLLK*RLTTPDKKHQKEPPFLWISYELHPDKWTVQPIVLPDKDSWTVNDIQKLVRKLN*ASQIYAEIKVRQLCKLLKGAKALTEVIQLTEEAELELAENKEILKEPVHEVYYDPSKDLIAELQKQRQGQWTYQIYQEPFKNLKTGKYARTRGTHTNDVKQLTEAVQKITTESIVI*GKTPRFKLPIQKET*DT*WTEYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVGAETFYVDRAANKETKLRKAGYVTSRGRQKVVSLTDTTNQKTELQAICLALQDSGLEVNIVTDSQYALRIIQAQPDKSESEIVNQIIEQLIKKEKVYLA*VPAHKRIRRNEQVDKLVSARIRKVLFLDRIDKAQEEHKKYHNN*RAMASDFNLPPVVAKKIVASCDKCQLKKEATHRQVDCSPRIWQLDCTHLEGKVILVAVHVASRYIEAEVIPAETGQETAYFLLKLAGR*PVKAIHTDNGTNFTSATVKAAC**AKIKQECGIPYNPQSQEVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDNRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIKDYGKQMAGDDCVASRQDED*
 MK115464.1,vif,5045,5624,forward,1.494270833333335,MENRWQVMIVWQVDRMRISTWKSLVKHHMYISKKAQGWFYRHHYENPHPRISSEVHIPLGDARLVITTY,MENRWQVMIVWQVDRMRISTWKSLVKHHMYISKKAQGWFYRHHYENPHPRISSEVHIPLGDARLVITTY*GLHTGERDWHLGQGVSIEWKERKYSTQVTPDLADQLIHLYYFDCFAESAIREAILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSVTKLTEDRWNKPQKTKGHRRSQTMNGH*
@@ -351,17 +351,17 @@ MK115702.1,env,5716,8257,forward,0.6026869158878512,MRVRGIRKNCQRLWRWGTMLTMLLGILM
 MK115702.1,tat_exon2,7874,7970,forward,0.6866666666666661,RPASQSRGDPTGPKEPKKKVERETETDPTD,RPASQSRGDPTGPKEPKKKVERETETDPTD**
 MK115702.1,rev_exon2,7875,8160,forward,0.3296703296703296,DPLPSPEGTRQARRNRRRRWRERQRQIRQISERILDTYLGRSEEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSTQILVECPAILESGTKE,DPLPSPEGTRQARRNRRRRWRERQRQIRQISERILDTYLGRSEEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSTQILVECPAILESGTKE*CC*
 MK115702.1,nef,8275,8896,forward,0.658536585365846,MGGKWSKHSKSEWADVRERMAQTEAAADGVGAVSRDLERHGAITSSNTATNNAACAWLEAQEEEEVGFPVKPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLCFGWCFKLVPVDPDKVEEANKGENNSLLHPMSLHGMEDTEREVLMWKFDSRLAFHHVAREKHPEYFKDC,MGGKWSKHSKSEWADVRERMAQTEAAADGVGAVSRDLERHGAITSSNTATNNAACAWLEAQEEEEVGFPVKPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLCFGWCFKLVPVDPDKVEEANKGENNSLLHPMSLHGMEDTEREVLMWKFDSRLAFHHVAREKHPEYFKDC*
-MK115095.1,gag,2,1697,forward,1.8823061630218694,MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC,SGFSFTFKSLFGRHLGDLKAKEKPEELSRRRTRLAERARQEARRGD**VRRNF*LAEARRREIGARASVLSGGELDR*EKIYLRPGRKKKYRLKHIVWASRELERFAVNPGLLKSSEGCRQILGQLQPALQTGSEELRSLYNTIAVLYCVHQKINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPISPRTLNA*VKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVRRHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRRSDIAGTTSTLQEQIR*MTNNPPIPVGEIYKR*IILRLNKIVKMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC*KCGKKGHQMKDCTKRQANFLRKIWPSHKGRPKNFLQSRPEPTAPPAESFRFKEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*
-MK115095.1,pol,1489,4579,forward,1.995034756703078,KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK,FFKEDLAFPQGKAKEFSPEQTRANSPASRELQV*GRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIRRQLKEALLDTGADDTVLKEINLPGK*KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK*RKLVDFRELNKRTQDF*KVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPRVRYQYNVLPQR*KGSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLK*RLTTPDKKHQKEPPFL*ISYELHPNKWTVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRRTKALTEVVPLTEEAELELAENKEILKEPVHRAYYDPSKDLIAEVQKQGGDQWTYQIYQKPFKNLKTKKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*EM**TEYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVDRAANRETKLRKARYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIRRNEQVDKLVSSRIRKVLFLDRIDKAQEEHEKYHSN*RAMASDFNLPPVVAKEIVASCDKCQLKREPMHGQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAAC**ARIKQKFSIPYNPQSQGVVESMNNELKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKRGIGGYSAEERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLL*KGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*NMEQFSKTPYAYFKESSEMSLQTSP*
-MK115095.1,vif,4445,5024,forward,1.9072538860103636,MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR,MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR*VYRHHHESHNPKTSSEVHIPLREARLVIKTY*GLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVRPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKRSHTMNGH*
-MK115095.1,vpr,4963,5254,forward,0.48958333333333326,MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS,MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS*
-MK115095.1,tat_exon1,5288,5453,forward,1.1791666666666667,MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ,MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ*
-MK115095.1,rev_exon1,5373,5451,forward,0.5769230769230769,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
-MK115095.1,vpu,5465,5711,forward,1.8469135802469132,MHALEIAAIVRLVVAAIIAIVV,MHALEIAAIVRLVVAAIIAIVV*SIVLIEYKKILRQKKIDRLIDRIRERAEDSGNESDEDQEELSAIVEIGHLVP*DSDDM*
-MK115095.1,env,5628,8229,forward,1.8793946449359673,MTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD,MKVTRTRKNYQQL*R*GILFLRIVMICSANNL*VTVYYEVPVWKEATTTLFCASDAKAYKTEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDELNLNCPNNNTCSNNTKYNMTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD*NDTLKQIVIKLKEKFKNKTIVFNQSSGKDPEIVMHSFNCREEFFYCNTTQLFNST*NNNT*NGTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQGQIRCSSNITGLLLVRDSKSNNSSNDTKTFRPRRGDMKDN*RSELYKYKVVKIEPLRIAPTHAKRRVVQKEKRAIGLRAFFLKFLGAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQARVLALERYLKDQQLLKI*GCSRKLICTTNVP*NVS*SPR*NRSLDKI*TNMT*KQ*EKEIDNYTDTIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQWL*YIKIFIMIVRGLISLRIVFTILSIVNRVRQRYSPLSLQTLLPTQRGPDRPERTEEGGREKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLRDLLLIVARIVELLRRRK*EALKYW*NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*
-MK115095.1,tat_exon2,7810,7906,forward,0.9838709677419355,RPSSQPRGDPTGPKEQKKEVERKTEAHPRD,RPSSQPRGDPTGPKEQKKEVERKTEAHPRD*C
-MK115095.1,rev_exon2,7811,8090,forward,1.3989130434782608,ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE,DPPPNPEGTRQARKNRRRR*RERQRHIHEISA*ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE*C
-MK115095.1,nef,8287,8872,forward,0.9300000000000002,MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*
+MK115095.1,gag,2,1697,forward,1.8384000000000005,MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC,SGFSFTFKSLFGRHLGDLKAKEKPEELSRRRTRLAERARQEARRGD**VRRNF*LAEARRREIGARASVLSGGELDR*EKIYLRPGRKKKYRLKHIVWASRELERFAVNPGLLKSSEGCRQILGQLQPALQTGSEELRSLYNTIAVLYCVHQKINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPISPRTLNA*VKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVRRHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRRSDIAGTTSTLQEQIR*MTNNPPIPVGEIYKR*IILRLNKIVKMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC*KCGKKGHQMKDCTKRQANFLRKIWPSHKGRPKNFLQSRPEPTAPPAESFRFKEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*
+MK115095.1,pol,1489,4579,forward,1.9898305084745753,KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK,FFKEDLAFPQGKAKEFSPEQTRANSPASRELQV*GRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIRRQLKEALLDTGADDTVLKEINLPGK*KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK*RKLVDFRELNKRTQDF*KVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPRVRYQYNVLPQR*KGSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLK*RLTTPDKKHQKEPPFL*ISYELHPNKWTVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRRTKALTEVVPLTEEAELELAENKEILKEPVHRAYYDPSKDLIAEVQKQGGDQWTYQIYQKPFKNLKTKKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*EM**TEYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVDRAANRETKLRKARYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIRRNEQVDKLVSSRIRKVLFLDRIDKAQEEHEKYHSN*RAMASDFNLPPVVAKEIVASCDKCQLKREPMHGQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAAC**ARIKQKFSIPYNPQSQGVVESMNNELKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKRGIGGYSAEERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLL*KGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*NMEQFSKTPYAYFKESSEMSLQTSP*
+MK115095.1,vif,4445,5024,forward,1.8546875000000016,MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR,MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR*VYRHHHESHNPKTSSEVHIPLREARLVIKTY*GLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVRPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKRSHTMNGH*
+MK115095.1,vpr,4963,5257,forward,0.5961538461538467,MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS,MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS*L
+MK115095.1,tat_exon1,5288,5453,forward,1.1236111111111113,MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ,MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ*
+MK115095.1,rev_exon1,5373,5451,forward,0.6538461538461537,MAGRSGDSDEELLTAVRIIKRLYQSS,MAGRSGDSDEELLTAVRIIKRLYQSS
+MK115095.1,vpu,5465,5711,forward,1.3548780487804881,SIVLIEYKKILRQKKIDRLIDRIRERAEDSGNESDEDQEELSAIVEIGHLVP,MHALEIAAIVRLVVAAIIAIVV*SIVLIEYKKILRQKKIDRLIDRIRERAEDSGNESDEDQEELSAIVEIGHLVP*DSDDM*
+MK115095.1,env,5628,8229,forward,1.8721962616822374,MTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD,MKVTRTRKNYQQL*R*GILFLRIVMICSANNL*VTVYYEVPVWKEATTTLFCASDAKAYKTEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDELNLNCPNNNTCSNNTKYNMTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD*NDTLKQIVIKLKEKFKNKTIVFNQSSGKDPEIVMHSFNCREEFFYCNTTQLFNST*NNNT*NGTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQGQIRCSSNITGLLLVRDSKSNNSSNDTKTFRPRRGDMKDN*RSELYKYKVVKIEPLRIAPTHAKRRVVQKEKRAIGLRAFFLKFLGAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQARVLALERYLKDQQLLKI*GCSRKLICTTNVP*NVS*SPR*NRSLDKI*TNMT*KQ*EKEIDNYTDTIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQWL*YIKIFIMIVRGLISLRIVFTILSIVNRVRQRYSPLSLQTLLPTQRGPDRPERTEEGGREKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLRDLLLIVARIVELLRRRK*EALKYW*NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*
+MK115095.1,tat_exon2,7810,7903,forward,0.4866666666666659,RPSSQPRGDPTGPKEQKKEVERKTEAHPRD,RPSSQPRGDPTGPKEQKKEVERKTEAHPRD*
+MK115095.1,rev_exon2,7811,8087,forward,1.2406593406593407,ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE,DPPPNPEGTRQARKNRRRR*RERQRHIHEISA*ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE*
+MK115095.1,nef,8287,8878,forward,0.9788617886178801,MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC,MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*
 MK115490.1,gag,549,2055,forward,0.2571999999999999,MGARASILSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSVNVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE,MGARASILSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNAVAVLYCVHQRIQVQDTKEALEKVEEEQNKSKKKAQQVAAADTDTGNSSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIAWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIKQGPKEPFRDYVDRFYRTLRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNSVNVMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETITPSQKQEPRDKELYPLSSLKSLFGSDPSSE*R*
 MK115490.1,pol,1841,4853,forward,0.14755732801595212,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVHQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQRKARELPSEQTRANSPTRRELQVWGRDNNSLSEAGAKRQGTVSLVFPQITLWQRPLVRIKIGGQFKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKEFRKYTAFTIPSTNNETPGIRYEYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILREPVHGVYYDPSKDLIAEVQKQGNGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWETWWAEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELQAIYLALQDSGSEVNIVTDSQYTLGIIQAQPDKSESELVHQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGVRRVLFLDGIDKAQEDHEKYHSNWRAMAGDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDLQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 MK115490.1,vif,4797,5376,forward,0.36979166666666674,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPDLADQLIHLYYFDCFSESAIRNAILGHIVNPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH,MANRWQVMIVWQVDRMRIRTWNSLVKHHMHVSKKTKGWFYRHHYESTHPRISSEVHIPLGDARLVVTTYWGLNTGEREWHLGQGVSIEWRKRKYSTQVDPDLADQLIHLYYFDCFSESAIRNAILGHIVNPRCEYQAGHNKVGSLQYLALKALTTPKRRKPPLPSVRKLTEDRWNEHQKTKGHRGSHTMNGH*
@@ -395,28 +395,28 @@ OQ092466,env,6292,8902,forward,0.5255841121495328,MKVRGIRKNYQHWWRGGILLLGMLMICNAT
 OQ092466,tat_exon2,8456,8552,forward,0.886666666666666,RSTPQLRGDPTGPKESKEKVERETETDPVH,RSTPQLRGDPTGPKESKEKVERETETDPVH**
 OQ092466,rev_exon2,8457,8733,forward,0.3626373626373627,DPPPSSEGTRQARRNRRRRWRERQRQIRSISERILSTFLGRPAEPVPLQLPPLERLTLDCSEDCGTSGTQGVGSSQIRVESPTILEPGTKE,DPPPSSEGTRQARRNRRRRWRERQRQIRSISERILSTFLGRPAEPVPLQLPPLERLTLDCSEDCGTSGTQGVGSSQIRVESPTILEPGTKE*
 OQ092466,nef,8876,9509,forward,0.5040650406503988,MGGKWSKSKLFGWPAVRERMRRAEPAAEPAADGVGAASRDLERHGAITSSNTPTTNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSPKRQEILDLWVYHTQGFFPDWDNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNCLLHPMSQHGMEDPEREVLEWRFDSRLAFRHVARELHPEYYKDC,MGGKWSKSKLFGWPAVRERMRRAEPAAEPAADGVGAASRDLERHGAITSSNTPTTNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSPKRQEILDLWVYHTQGFFPDWDNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNCLLHPMSQHGMEDPEREVLEWRFDSRLAFRHVARELHPEYYKDC*
-OQ092463,gag,801,2319,forward,0.3058823529411774,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ*R*
-OQ092463,pol,2105,5117,forward,0.17403751233958542,FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-OQ092463,vif,5061,5649,forward,0.33854166666666674,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*SF*
-OQ092463,vpr,5579,5870,forward,0.35416666666666674,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS*
-OQ092463,tat_exon1,5850,6066,forward,0.4027777777777777,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ
-OQ092463,rev_exon1,5989,6067,forward,0.46153846153846145,MAGRSGDSDEELIKTVRLIKLLYQSS,MAGRSGDSDEELIKTVRLIKLLYQSS
-OQ092463,vpu,6081,6330,forward,0.35185185185185186,MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL,MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*
-OQ092463,env,6244,8827,forward,0.509590643274854,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL*
-OQ092463,tat_exon2,8408,8504,forward,0.5,RPTPQPRGDPTGQKESEKKVERETETDPDH,RPTPQPRGDPTGQKESEKKVERETETDPDH**
-OQ092463,rev_exon2,8409,8685,forward,0.39560439560439553,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*
-OQ092463,nef,8828,9461,forward,0.38627450980392153,MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*
-OQ092465,gag,855,2358,forward,0.2968627450980399,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ*
-OQ092465,pol,2150,5162,forward,0.17956564659427454,FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-OQ092465,vif,5106,5694,forward,0.38541666666666674,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*SF*
-OQ092465,vpr,5624,5915,forward,0.30208333333333326,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS*
-OQ092465,tat_exon1,5895,6111,forward,0.4027777777777777,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ
-OQ092465,rev_exon1,6034,6112,forward,0.46153846153846145,MAGRSGDSDEELIKTVRLIKLLYQSS,MAGRSGDSDEELIKTVRLIKLLYQSS
-OQ092465,vpu,6126,6375,forward,0.35185185185185186,MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL,MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*
-OQ092465,env,6289,8881,forward,0.5119298245614039,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*
-OQ092465,tat_exon2,8462,8558,forward,0.3999999999999999,RPTSQPRGDPTGQKESKEKVERETETDPDH,RPTSQPRGDPTGQKESKEKVERETETDPDH**
-OQ092465,rev_exon2,8463,8739,forward,0.39560439560439553,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*
-OQ092465,nef,8882,9515,forward,0.4009803921568629,MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*
+OQ092463,gag,801,2313,forward,0.20240000000000014,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ*
+OQ092463,pol,2105,5117,forward,0.10767696909272173,FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+OQ092463,vif,5061,5640,forward,0.296875,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*
+OQ092463,vpr,5579,5870,forward,0.30208333333333326,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS*
+OQ092463,tat_exon1,5850,6066,forward,0.38888888888888884,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ
+OQ092463,rev_exon1,5989,6067,forward,0.34615384615384626,MAGRSGDSDEELIKTVRLIKLLYQSS,MAGRSGDSDEELIKTVRLIKLLYQSS
+OQ092463,vpu,6081,6330,forward,0.44999999999999996,MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL,MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*
+OQ092463,env,6244,8827,forward,0.44534746760895216,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL*
+OQ092463,tat_exon2,8408,8504,forward,0.6000000000000001,RPTPQPRGDPTGQKESEKKVERETETDPDH,RPTPQPRGDPTGQKESEKKVERETETDPDH**
+OQ092463,rev_exon2,8409,8685,forward,0.3296703296703296,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*
+OQ092463,nef,8828,9461,forward,0.29182692307692304,MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*
+OQ092465,gag,855,2364,forward,0.3737903225806454,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ*R*
+OQ092465,pol,2150,5162,forward,0.1734795613160518,FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+OQ092465,vif,5106,5685,forward,0.33854166666666674,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*
+OQ092465,vpr,5624,5915,forward,0.17708333333333326,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS*
+OQ092465,tat_exon1,5895,6111,forward,0.25,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ
+OQ092465,rev_exon1,6034,6112,forward,0.5769230769230769,MAGRSGDSDEELIKTVRLIKLLYQSS,MAGRSGDSDEELIKTVRLIKLLYQSS
+OQ092465,vpu,6126,6375,forward,0.3063291139240505,MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL,MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*
+OQ092465,env,6289,8881,forward,0.5249417249417256,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL,MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*
+OQ092465,tat_exon2,8462,8558,forward,3.5,RPTSQPRGDPTGQKESKEKVERETETDPDH,RPTSQPRGDPTGQKESKEKVERETETDPDH**
+OQ092465,rev_exon2,8463,8739,forward,0.41758241758241765,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*
+OQ092465,nef,8882,9515,forward,0.3285714285714285,MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*
 OQ092462,gag,767,2270,forward,0.27679999999999993,MGARASVLSGGELDKWEKIRLRPGGKKKYQLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFHTVATLYCVHQKIEVKDTKEALEKIEEEQKKSKKKAQQAAADTGNNSQVSQNYPIVQNMQGQMVHQPLSPRTLNAWVKVIEDKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQLREPRGSDIAGTTSNLQEQIAWMTHNPPVPVGEIYKRWILLGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQVANPASIMMQRGNFRNQRKPIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKVWPSRKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKPEPIDKELYPLASLRSLFGNDPSSQ,MGARASVLSGGELDKWEKIRLRPGGKKKYQLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFHTVATLYCVHQKIEVKDTKEALEKIEEEQKKSKKKAQQAAADTGNNSQVSQNYPIVQNMQGQMVHQPLSPRTLNAWVKVIEDKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQLREPRGSDIAGTTSNLQEQIAWMTHNPPVPVGEIYKRWILLGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQVANPASIMMQRGNFRNQRKPIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKVWPSRKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKPEPIDKELYPLASLRSLFGNDPSSQ*
 OQ092462,pol,2062,5074,forward,0.1495513459621136,FFREGLAFPQGEAREFPSEQTRANSPTRRELQVWGRDDNSLSETGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDGNKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPYKNLKTGKYARMRGTHTNDIKQLTEAVQKIATESIVIWGKTPKFKLPIQKETWEAWWIEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLKGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQEVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREGLAFPQGEAREFPSEQTRANSPTRRELQVWGRDDNSLSETGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDGNKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPYKNLKTGKYARMRGTHTNDIKQLTEAVQKIATESIVIWGKTPKFKLPIQKETWEAWWIEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLKGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQEVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 OQ092462,vif,5018,5597,forward,0.34375,MENRWQVMIVWQVDRMRIRTWKSLVKHHMHISRKAKNWLYRHHYESIHPRISSEVHIPLGDARLVITTYWGLLTGERDWHLGQGVSIEWRERRYRTQVDPDLADQLIHLYYFDCFSESAIRNALLGRVVSPRCEYQAGHNQVGSLQYLALTALITPKRRKPPLPSVRKLTEDRWNKPQKTKGHKGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMHISRKAKNWLYRHHYESIHPRISSEVHIPLGDARLVITTYWGLLTGERDWHLGQGVSIEWRERRYRTQVDPDLADQLIHLYYFDCFSESAIRNALLGRVVSPRCEYQAGHNQVGSLQYLALTALITPKRRKPPLPSVRKLTEDRWNKPQKTKGHKGSHTMNGH*
@@ -428,17 +428,17 @@ OQ092462,env,6201,8844,forward,0.5698598130841122,MRVKGIRRNYQHWWRGGTLLLGILMICSAT
 OQ092462,tat_exon2,8359,8455,forward,0.4866666666666659,RPASQPRGDPTGPKEPTKKVERETETDPDH,RPASQPRGDPTGPKEPTKKVERETETDPDH**
 OQ092462,rev_exon2,8360,8636,forward,0.39560439560439553,DPPPSLEGTRQARRNRRRRWRERQRQIRIISERILSTHLDRPAESVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKE,DPPPSLEGTRQARRNRRRRWRERQRQIRIISERILSTHLDRPAESVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKE*
 OQ092462,nef,8779,9406,forward,0.7422764227642202,MGGKGSKMRGWVAVREKMRRTKPEDEPAANGVGAASRDLEKYGALTSSNTVATNADLAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVHHTQGYLPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDQVEEANAGENNSLLHPMSLHGIEDPEKEVLMWKFDSHLAFRHMARELHPEYYKDC,MGGKGSKMRGWVAVREKMRRTKPEDEPAANGVGAASRDLEKYGALTSSNTVATNADLAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVHHTQGYLPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDQVEEANAGENNSLLHPMSLHGIEDPEKEVLMWKFDSHLAFRHMARELHPEYYKDC*
-OQ092464,gag,773,2282,forward,0.29294117647058937,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ*R*
-OQ092464,pol,2068,5080,forward,0.16712734452122402,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-OQ092464,vif,5024,5603,forward,0.34375,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*
-OQ092464,vpr,5542,5833,forward,0.33333333333333326,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS*
-OQ092464,tat_exon1,5813,6032,forward,0.4027777777777777,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ*
-OQ092464,rev_exon1,5952,6030,forward,0.34615384615384626,MAGRSGDSDEELLQTVRLIKLLYQSS,MAGRSGDSDEELLQTVRLIKLLYQSS
-OQ092464,vpu,6044,6290,forward,0.2962962962962963,MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL,MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL*
-OQ092464,env,6207,8790,forward,0.4719298245614041,MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL,MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*
-OQ092464,tat_exon2,8371,8467,forward,0.30000000000000004,RPTSQPRGDPTGQKESKKKVERETETDPDH,RPTSQPRGDPTGQKESKKKVERETETDPDH**
-OQ092464,rev_exon2,8372,8648,forward,0.3626373626373627,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE*
-OQ092464,nef,8791,9511,forward,0.39068627450980387,MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*HRAFYKGLSAGDFPGRRGRGGTGEWRALRCCI*
+OQ092464,gag,773,2282,forward,0.38588709677419364,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ,MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ*R*
+OQ092464,pol,2068,5080,forward,0.1734795613160518,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+OQ092464,vif,5024,5603,forward,0.29166666666666674,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*
+OQ092464,vpr,5542,5833,forward,0.20833333333333326,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS,MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS*
+OQ092464,tat_exon1,5813,6032,forward,0.25,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ,MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ*
+OQ092464,rev_exon1,5952,6030,forward,0.5769230769230769,MAGRSGDSDEELLQTVRLIKLLYQSS,MAGRSGDSDEELLQTVRLIKLLYQSS
+OQ092464,vpu,6044,6290,forward,0.4265822784810127,MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL,MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL*
+OQ092464,env,6207,8790,forward,0.5058275058275068,MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL,MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*
+OQ092464,tat_exon2,8371,8467,forward,3.5,RPTSQPRGDPTGQKESKKKVERETETDPDH,RPTSQPRGDPTGQKESKKKVERETETDPDH**
+OQ092464,rev_exon2,8372,8648,forward,0.3846153846153846,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE,DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE*
+OQ092464,nef,8791,9412,forward,0.3542857142857141,MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC,MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*
 OQ092467,gag,808,2308,forward,0.24380000000000002,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEEFRSLYNTVATLYCVHQKIEVKDTKEALEKIEEEQNQSKKKAAAAAADTGNRSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTIGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSNLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSTVMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSKPEPTAPPEESFRFGEETTTPSQKQGPIDKELYPLASLKSLFGNDPSSQ,MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEEFRSLYNTVATLYCVHQKIEVKDTKEALEKIEEEQNQSKKKAAAAAADTGNRSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTIGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSNLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSTVMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSKPEPTAPPEESFRFGEETTTPSQKQGPIDKELYPLASLKSLFGNDPSSQ*
 OQ092467,pol,2100,5112,forward,0.14356929212362912,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGKWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQSQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIAIESIVIWGKTPKFKLPIQKETWETWWTDYWQATWIPDWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETRSGKAGYVTDRGRQKVVPLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKILFLDGITKAQDDHERYHSNWRAMASDFNLPPIIAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSAAVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGKWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQSQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIAIESIVIWGKTPKFKLPIQKETWETWWTDYWQATWIPDWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETRSGKAGYVTDRGRQKVVPLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKILFLDGITKAQDDHERYHSNWRAMASDFNLPPIIAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSAAVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
 OQ092467,vif,5056,5644,forward,0.43229166666666674,MENRWQVMIVWQVDRMRIRTWNSLVKHHIHVSKKAKGWVYRHHYESTHPRISSEVHIPLGEARLVIATYWGLHTGERDWHLGQGVSIEWREKKYITQVDPDLADQLIHLHYFDCFSESAIRNAIVGRLVSPQCEYQTGHNKVGSLQYLALVALITPKKRKPPLPSVRKLTEDRWNKPQKTKDHRGSHIMSGH,MENRWQVMIVWQVDRMRIRTWNSLVKHHIHVSKKAKGWVYRHHYESTHPRISSEVHIPLGEARLVIATYWGLHTGERDWHLGQGVSIEWREKKYITQVDPDLADQLIHLHYFDCFSESAIRNAIVGRLVSPQCEYQTGHNKVGSLQYLALVALITPKKRKPPLPSVRKLTEDRWNKPQKTKDHRGSHIMSGH*SF*
diff --git a/tests/expected-results-large/blast.csv b/tests/expected-results-large/blast.csv
index ba58280..95436d9 100644
--- a/tests/expected-results-large/blast.csv
+++ b/tests/expected-results-large/blast.csv
@@ -1,130 +1,117 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,1938,1,1691,545,2481,0.0,1676,82.147,1592,plus,49-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N6GA1AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-N-NANTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG9-N-N-N7TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG12-N-N-N8AG44CT17TC47TC27TG99CG10-N-N-N-N-N-N-N-N-N26GA23AG2GA30GATC36TC32CT11AG5CTAT7AG30-N-N-N5GA20AG17AG8AG2CT26CT8GA9AG7AG27-N-N-N-N-N-N-N-N-N3AG1GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5ACGA12AG24AG-N-N-N1CT9CT25TC24AG25GA9TC11CT6-N-N-N-N-N-N-N-N-N18GT1-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N9GA8CT7AG6
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,196,1809,1997,448,643,3.77e-58,222,92.347,181,plus,12GNTNAN2-G-A26-N7-N9GC21CT9GTAG46GA2-N21-N9-N17
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,200,2,180,10730,10929,2.85e-51,199,89.500,179,plus,21-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,9890,329,9278,569,10443,0.0,9284,83.893,8297,plus,11TC10AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA1AG3-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT4AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NCA12-N-N14-G-A-A-G-A-A9AG17-N-N-N-NAC5-N-N3-N-N-N-N-N11-T5-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49CA39AG33GA32GT5AG42TG27GA8AT31CGAC10AG25GA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG5CA1CA1GA5AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG7AG20CTAC4GA6GA64TC6-N-N-N147GT16AC93-N-N-N-N-N-N-N-N-N7YCWAYC2WA16TA5AG67GA12AG23CT15CT7CT8TC8GA30-N-N-N9GT16GA23WA26AC14GA2AG14GA2AG14AG9-N-N-N-N-N-N-N-N-N10AG1TG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGC2AG23TCTA3GA10AG1-N-N-N1TC60GN22GN4GN19GT6-N-N-N-N-N-N-N-N-NGN12AN6-N9CT9TC4-N-N-N-N-N-N-N-N-N-N-N-N3AG44-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N17CT5-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTN18-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AG9GA14AG6CA1CA23AG20TC33AGGA87CTTA11GA65AC4TC17CT59TC57AC13GA42GA25TC83TC2CT2AG35TC33GA39TC33CT71TC74AG16AG6GA2GA2GA9CT4GA1GA7CT2AGCA30TC75ACGN4AN32TN22CT44CT1GA4TC8GA2AG12AC18GA11GA2AG39TA34GA56GA2AG7GA1AGCT15TA39AG1CT8TC18-N-N-N7GA7CT13GA12AG13AG50TC26GA2AG47CT5GA5AG14GA9AG3AG3AG8GA3GA5CA3CATGAG35TC13GA5GA3TC62CA1AG19AG39TC11AG47CT3GA14AG32-N-N-N2TA69-N-N-N17CT3GA8-N-N-N56AG27GA70GA11TC5TC32AC18ACGC8CT4GA2AG1GA26AG17AC80TG14TC26CT34GA3CT18GA43AG3-N-N-N74CT56GA17GA63-N-N28CT11GATGTG13GAGAGAGA27AT11AG15TC16TG-N-N-N-N-N-N4GA3GA78AG12GC18AC21CG7CT5CT11CA14GT3TA9AG1AT38-N-N-N8AG8AG16CT16-N-N-N-N-N-N-N-N-N-N-N-N28CGAG31AG20GA6CT6AC2-N14TC7GA7AG25AGTGTA3-N-N-N14GA39-N-N-N9AC31CT3-N-N-N11GA4GA16GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2AGGAAGAG5CT3AG15TN-N-C41AG10CA2CA44TCGA1CG5CG37-N-N-N-N-N-N9CA7AG20TA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2AT2-A2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-T1AG26AGTC21AGTA1CT5AGAT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT15CA3TG22-N-N5GA8-G-G-A-T-C-A-G-G-A4GT1GA5AT13GNGNGNTNGNGNANGNANTNGNGN4CT13-N-N-N-N-N-N1TCAG26AT-N-N-N-N-N-N38GA17AC29TAGA49CT12GC7GA1TA21CT12GA25TC18CG10GA8AG22GC6GT9T-T-G-1GCGC3GACT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1AT6GA2GT2AC1AG-G-T-T6GA2GA3CTGAGA-T-T-T4ACTA4A-T-G-G-A-1AC2G-4GA4AGAT19GC5GC5GA7GATGGA4AG5AT4TC1CG2TGTAAG32CG1ATCACT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT4CT5CT2GA6CT27-N-N-N12GC1GA21GA32AG6CA3CT8AG10CA16-N-N-N26AG2AG5TC3CT1GA30-N-N-N15GACACA15GA1TC23CGCG52CA1GA3CACNANGNANGNAN18GTTA1AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N3AG5-A-T-A3AG4GA-N-N-N-N-N-N-N-N-N-N-N-N18AC21CA9AC7CT1AG1CA12CTAT2TA1GAGAAG3ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AG7GTCTAC15CT13CT16GA23TA7AG18TNTNTNANANTNANGNTNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-A2-T2GA1AG2GAACAT3TACAATAGAG2ACCT2TA3GCGC2GA1GAAGCT2AT2CA24TA5-N-N-N4TGGA38CTAGGCCA11AC-N-N-N11TC2TC20AG9AGAG1AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T-G1CG6GA1GCTA10CT23GA47AG5AG27-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA53AG20-N-N-N-N-N-N-N-N-N23GA5GA39TC22CT2AG15AG8GA1GA12AC16GA2GA8CT11AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT9AG1TG15GC7CG9AG13CT6CT2TA1CTTC10AC5AG2CA2GA28AC3AG4AC26AG28TA22CT2GA5TG15GACT28CA7TC8AG2GA2TC15AGACCT-N-N-N-N-N-N3GA5-N-N-N20AC30AG5AGTGTG1GC9CT4CT7CA1TC7AT3TC57AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N23TC14AG10GT6GA4AG1AGAG12CT3CT1CT7CT15TC24GATC1GA5GA6AT6TC4GT30GA5GA3-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9CA12ACGA2GATG1TG1ANTN-N-G-G10AG1TG2AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT9-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N16CG35CG4GT1AG45AG2CT9GA4-N-N-N21AG32CG1GT33TC2-N-N-N-N-N-N1CT14AT18GT5TCAC8GA5-N-N-N3AG12CA1AT1CT-N-N-N12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,197,1,182,10247,10443,1.48e-41,169,81.218,160,plus,7GT5TCAC8GA5-N-N-N3AG12CA1AT1-T-N-NCN12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,4508,1,4082,5,4512,0.0,4718,87.866,3961,plus,14-C-A-C1GNGNTN4GAACAG51-N5GA12-N-N9GA4-N-NCT5TA23TA7-N11TG9GT7GA1-N-N-N4TCGACA11AC16AG1AG10-N1GA5GT10AG10AGTA5AG52-N4AT1-N-N5TC7TA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N30-N7-N9GC79GA2-N21-N9-N16TC1-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33TC1CG12CTACAG44GA154AG27AG7GA25GC3GA14-N-N-N17GA27AC3AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N114-N-N-N8AG138TG4CT41GA63-N-N-N-N-N-N-N-N-N29CT18AC22GA8TC59TC72-N-N-N35GA17CG6TC31GA17AG14GT12-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N19AG20-G4-N-NGN1AT35TC29GA49-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N18CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16GC1-N-N-N-N-N-N30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG88-N-N-N17AG11AG12GA52CT128CT21TA31AG12CT86
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,333,1,318,10088,10420,5.99e-97,352,87.988,293,plus,14TCGAGC5GA1AG4-N-N-N52GA21GA3AGCT5TA7-N-N-N-N-N-N16TA18TG5GT3GA11-N-N-N3GACA11AC4-N-N-N12AG1AG17GT10AG10AGTA5AG28AG27
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,286,381,634,10644,10929,3.84e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N21-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N4TC22-N-N-N-N-N17-N-N-N45
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,91,4089,4178,494,584,3.71e-28,123,97.802,89,plus,7-N9GC73
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,5632,666,6007,1596,7224,0.0,5972,87.749,4942,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108-N-N-N-N-N-N-N-N-NCA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG30-N-N-N5GA5AG2TC11AG17AG8AG38GA2GA14AG27-N-N-N-N-N-N-N-N-N4CT4GAGA1AT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT1AC4CA35-N-N-NCACT6AG28TC5AG44GA18GA5CT3-N-N-N-N-N-N-N-N-N20-N6AG11TCCT4-N-N-N-N-N-N-N-N-N-N-N-N15CT4CT7CA4-N-N-N-N-N-N-N-N-N-N-N-NANGNANANANTNTNCNCNTNCNANGNANGNCNANGNANCNCN18ANGNCNCNCNCNTNCNCN17TC4-G-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A2AGGA11TC1-N-N-N-N-N-N13AC1AG2GA8GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA1-N-N-N13GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG6-N-N-N2AT2CA27AG22AG6AG8-N-N-N30-N-N-N17TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA21-N-N-N13CA31GA28TC38CT35AG63-N-N28TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC15-N-N-N-N-N-N1AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT37-N-N-N30AG5GT13GA-N-N-N-N-N-N-N-N-N-N-N-N26AT1AC53AG6TC9-N19AG10GAAT17CT5AGCACTAT3-N-N-N2AC2AT1AG1CT4AG3TC29AG5-N-N-N30AC10TC2-T-N-N17AGCA15AG2GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TGGA2AG2AG24-N-N2AC38GAGA3CG46GT5TC3CAAC43AN-N-N-N-N-N-C8TG3CA3AGGA18TC1CT5CT14AG8-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCACGA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT8GAGT28-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC1AGAGAT5AG5AC3GT22-N-N8CT5GA1ANTNCNANGNGNANANGN2TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC12-N-N-N-N-N-N21GA1GA5TA-N-N-N-N-N-N37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG6
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,3087,6046,8799,7335,10420,0.0,2303,77.227,2384,plus,3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG3CT2TC27-N-N-N6AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA15-N-N-N20AG8GA11AG11TC2CT9AG5-N-N-NAG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39-A-A-T-C-C-G3-C-C-AAG2TA1TG1GC11AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N2GACA1GA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN20CT3-A3A-2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG5AC12ACTCGA7AT42CTAT6GA19-T-T-T-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G-T-A-C-T-T-G-G3-AGC1TG2TG2-T-C2CA2GA2TCATAG1CA4CG1AG1AC1ACTA5AC5GA21-N-N-N4GT7GA28TC8GAACTA6-A-N-NGN2CT17AG2AGAC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNANANANTN5TC1CAACGA1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA5-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18AG1-G-N-NANGNGNAN1CGGATA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT7CT38GC3CA16AG6-N-N-N-N-N-N-N-N-N23AG12CT29AC28AG15GA5TG17CA56AG14AG10CT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA10-N-N-N-N-N-N9-N-N-N2AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G21GA2TA2AG2GNCN-N-A-T28GAAG1ANGNANANTNTNGNANTNCNCNANANGNGNCNCNTNGNCNTNGNCNANANGNGNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG17CA1GA4AG18TC8TC26TG2AG4TC41AG-N-N-N-N-N-N-N-N-N-N-N-N2AG2CT10GC33AG6TG1GA48TCGAGC5GA6-N-N-N5AT9TC5GA1TC14AC13GA3AG14AG13TA7-N-N-N-N-N-N16TA18TG5CTCA1AGGA4GAAG5-N-N-N3GA12AC1TA2-N-N-N3CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,737,46,669,1599,863,5.32e-174,609,80.190,591,minus,33TC8-N-N-N12TC68TG1GT16AT7AG3-A-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTN3GACTCTTG4TG15CT11CT17-N-N-N14CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T12-N-N-N-N-N3-N-N6-N-N-N-N24-N-N-N-N-N-N11
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,682,8482,9069,5,686,7.11e-135,479,77.859,531,plus,14-C-A-C1GNGNTN4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN6TA23TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG12-N1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N6TC16CT6-N7-N9GC21CT24GA35-N21-N9-N18-N19-N-N2-N6-N10
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,236,8863,9069,10645,10880,9.60e-50,196,86.017,203,plus,5-N10CN1-T-N6-N6-N9-N-N-N1GC10-N11CT2-N10-N12GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N16
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,5359,882,5935,1866,7209,0.0,5619,87.498,4689,plus,6TC32TC59TC72-N-N-N5GA5AG17CT17TA5AG29CT8GA32GT12-N-N-N-N-N-N-N-N-N11CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA2GA1GA10AG14GA10-N-N-N2GT34TC29GA49-N-N-N-N-N-N-N-N-N11AT8-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA11CT4CT3AG6AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG14-N-N-N-N-N-N-N-N-N3GA11TG1TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2A-13TCTC1-N-N-N-N-N-N22CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA17AG41CT13AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG57AG7TC32GA11TC56CT69CT45CT39AG95AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA2GA9GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA29-N-N-N2CT10GA3AG5TA5AG12TA13AG38CT38AG12AG10GA2TC23TC2AG2AG2AT4CT18CT3GA1CT18AG2TA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG6-N-N-N5GA5AG35CT6AC1AG15-N-N-N15TA14-N-N-N57TC26AG61GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29CA18CG7AGCA22GT99AG47-N-N-N45GA13GA14TC23GA32AG17AG2TC34GA25-N-N6CA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTANGN-N-N-N-N6CT1AG3GA1GA14AT35AG25GA27CA29TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC-N-N-N14GA2GA12AGTC10CA8-N-N-N-N-N-N-N-N-N-N-N-N1GA2AT21GT1GC24ACGA9GA17AG6TC9-N10AG8AG8AG1GAAT11GA2CT9GACT4-N-N-N2TC6CT4AG23AG15-N-N-N8TCCA23GC7TC2-T-N-N12AG4AGGA2CT5GA6AG2CATC1ANCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG1TC3-G-G24-N-N9GA20GA10GAGA5GT2CT4GA23AT8CAGACGGTAT2CT3TA9GC37-N-N-N-N-N-N9AG3CA4GA1TC2CT1GA2ACCT7TC4TC26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26TA1TA14CT2TG5TC6CA20ATGT7AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA-A10AT2CA8AC3GT22-N-N14GA1ANCNCNANANGNANANGN2TA1GAGT4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-4TG5CG16-N-N-N-N-N-N4CTAG4CT5AG3-T1GC2GA1CA-A-A-N-N-N-N-N-N1CT36AG6GA28CT11CT11CT5CT14TC34AT2-T-G-G7AG14TCGACTAG9AG10TA76CG6CG6
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,3120,5967,8735,7333,10443,0.0,2467,78.942,2463,plus,3GA1AGTG5-G4AG2GA1CA12TC3GA3CG4GATG8AG9AG3CG8CT17GA2GA3AC3TAAG1GTGA6AC4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNCNTNANTNANANTNANCNCN7GA5TC2AG7TA5AGCT19-N-N-N62GA5GTGA6ACTG16TC5AC6TC9-N-N-N42TC24GA3-G-N-NTN15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC10-A-A-A3-T-C-C4AC2TG1TG19TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1CA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN39GA1GC9AC8GAAGTC8GA9-G-G3ATGA1-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA1GA6GA7CG23GA7TC16AG23AT26ATAT2GA1-N-N-N-N-N-N-N-N-N-NANCNTNANCNANGNGN4ACAT3-A-G3-T-G-A3AGGT10AT4TG2-G-T-G1TC1TCTA5AC10AGGA4GAGA6GA2-N-N-N12GA46-A-N-NTN23AG3CT2CATC13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7A-T-G-3C-G-G-2AG1C-A-C-1AT1TC2AG69CA36GA4-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT46AC5AG14AG6-N-N-N-N-N-N-N-N-N2TA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGTAT4TC2ATAC10CG46GA30GA10GT18AT4TC20AGAG20AG37CT22TA7GA2GN-N-N-N-N-N-C8-N-N-N20CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG9TC7AG25GA5GAGT19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT1-N-N-N-N-N-N-N-N-N-N-N-N9AN-N-G5AT4TAAG1TGCG6CA3AG2GT1GNGN-N-A-T3GA6GA1ATAG17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CG14GA4AG25GA9TACA9AG7TG6AC8AC12GA8GA2AG4GA3AGGNANAN-N-N-N-N-N-N-N-N-N8CT7GC27AT7GC49TC5TC8CAAG4-N-N-N21GA5AC7GA16GA25AG1AC12-N-N-N-N-N-N16TA13AG1GT2AG5GTGA1TGGA5AG5-N-N-N1CA1GA8GA3AC2TG1-N-N-N16AG2AT12CT3TC1AG16TA5AG21CT1GA16AC1AG13AT1-N-N-N-N-N-N-N-N-N12
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,956,40,881,1812,857,0.0,893,83.577,799,minus,15CT14GA2GA23CT26CA22AC30AG2TC17AG38CT29GT17TC8-N-N-N3AG23CT53CG32-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA5AG1TG5GT20TCCT17-N-N-N3TC69AGCT13AT8TC7CT17TG1CA75CT2TC29CT6CT31CT6TCTGGA23CT24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T-T11CNGNTN-N-N-C-A-G-N-N6-N-N-N-N15TC8-N-N-N-N-N-N17
-MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,11027,671,8404,8982,5,675,2.50e-141,501,79.136,531,plus,8TC5TC3-N-N-N6AG25GA5AC7GA11-N5GA12-N-N14-N-N1AC28TA7-N6AG1GT2AG6GA1TGGT5AG1GA1-N-N-N3CATCGA8GA3AC2TG17AG2AT5GN1-A5CT3TC1AG16TA5AG21CT1GA4GA11AC1AG9-N4AT1-N-N14GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G11GN-N-N10AGAC11AT6-N7-N9GC56AT22GA2-N21-N9-N16AC1-N19-N-N2-N6
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,6391,559,6512,830,7217,0.0,6748,87.764,5609,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-NANANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT10AG11-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,3119,6517,9254,7303,10420,0.0,2517,79.513,2480,plus,14CT5TC1AG1-A2GAGT2AT1G-4CA1-A-A-A1AG3AG2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG34-N-N-N23TC38GA5GTGA6AC10TA12AC16-N-N-N19AG9GA11AG15TC14-N-N-N16ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GACACA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-A-G-T3-G-A-A3-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA6-N-N-N4GT6AGGA31TC2AT3AC8-N-N-N21TC1AG6GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-A2AG2CAGC1GACT3AT1TC4CT26AG12GA25AT9GA22GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG18-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GT46GC3GA16AG5-A-N-N-N-N-N-N-N-NGN1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA2-N-N-N-N-N-N9-N-N-N20CA17AG17ACGA18TC10TA10CT21CATG2GA33AG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT-N-N-N-N-N-N-N-N-N-N-N-N3TC5AN-N-G5GT22GT1GNGN-N-A-T10GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CG-G2TNGNANAN-N-N-N-N-N-N-N-N16GC9GA19TA3AG1GC4CG1CA48TC9AG4-N-N-N14CT6GA5AC24GA25AGCT13-N-N-N-N-N-N8GA5TC1TA15GT8-T-A-A-G-A-T-A-G-A7-N-N-N3CA12AC1TA2-N-N-N12AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14
-MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,11027,631,8946,9480,5,635,2.09e-128,458,78.288,494,plus,14TC3-N-N-N5ACAG18CT6GA5AC19-N5GA12-N-N14-N-NCT21GA5TC1TA7-N8GT8-G-A-A-G-T-T-A-G-A3GA1-N-N-N4TCCA12AC1TA14AG12-N1GA5GT8AG1AG6AG3AGTA5AG40ACAT10-N4AT1AN-N3-A11TC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG6AG2GN10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N6TC23-N7-N9GC18GT2CT8ACGT50-N21-N9-N9
-MK115690.1,Ref.39_BF.BR.03.03BRRJ327.EU735536,0,9689,11027,9430,771,9405,1002,10420,0.0,8040,80.806,7620,plus,40GA7CT1AGGC17GA32GA5CA38CT18TC4AG15AC17GT27GAAG5GA1AT27AG15GA19TATC4GT1AG1GA14-N-N-N17AG15GA3GA1GA9GA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNCNANGNCNAGCT3CT17AG5CTAC62GA10GA9-N-N-N20CT6CT1AG59AG104GA62-A-N-N-N-N-N-N-N-NTN20AG8TC20GA29CT2CTAGCT9AG23GA20TC41GA27TC2-N-N-N44GA2TA17GA9AT19AG8TC17AG2GT12-N-N-N-N-N-N-N-N-N4CT7TC2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA2GA39-G-G-NANAN1GT12TC5CT8TA11AC20AG1GA49-G-T-G-N-N-N-N-N-NCNCNAN20-N6AG12CA4-N-N-N-N-N-N-N-N-N-N-N-N19CT6AG6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N3GA6TC5TG7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N7CAAC2AG1AC8CA1GA2CA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6TC3GA9AG14AG15AG4GAGA44GA16CT16GA11AG35GA10CG1AC4TC9CT11AGGA4AG8AG2AGGA19CT12AG4GC14TC59AG13AGAG74GA10AG3AT8GA68CT11AT27GA22CT20AG12CT10TA5CA20CT2AG2CG11TC8TC2CTAG8AG1AC17GAGA4AG2TC20GA30AGGA21AG4AT16AG1CA3GA4AC9AG18GC6CTCT10GA9AGTC9AG5GA16AG6AG3ATCT39TG8GT17CG21GACA12AG2AC44CT14CT2CT14AG1GA12AG2AC9GA20AG31AG5AG2CT2GA2GA65GA7AG9GA50AG29TC14GA5GA1CT9AG3GT1CTATCT12GA12-N-N-N1CT6AG4GA18AG8ATGA13AG26GA20TC2CTTC4AG3TC7CT8GA1AC3AG20TC23CT2GA10CT22AG1TC14AG3AG2CT7TG29TA6TC13AG5GA14TC17GA17TC17AG19GA23AC9GA5TC54TC10TA5CT2GA8GA20GA2CT3-N-N-N11GA44GA8GA6-N-N-N30-N-N-N20GA35AG5TC8TC62CT20GA2AGGA10TCAC1TC15CA11GACA2CT34GA19CT8AG2GA2CT32AG12GA13CT2TA5GA12GAGC30GA81GA5GA14TA14CT11-N-N-N2TC12CA58CT44AC32TC45AG14-N-N5GAAC1GC4CA1CA12CT8TC2AG5GAGA3AG4G-5GT2-C6AG3TC8AC1AG22AG5TC16AT-N-N-N-N-N-N6CT1GA1CT5CA39CT2GA31AGGAGAAG22AG31CT34TC11AGTC1GT6CA9GA1AT18-N-N-N12TC26GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT19AG3CA35GA13CA3GA2AG2AG1AC8-N14TC4GA2GA20AG12ACTCGA3-N-N-N6GA7GA3CT1CT8GA18AG5-N-N-N5AG3TA9GT18CT6-N-N-N11GA4GA15AC6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG10AG4AG15-N-N5AGTC26CT19CACT1CATA13AG3TC4ATTA23CA28AG12AG-N-N-N-N-N-N4GAAGGA2TA2CT3AC1GAAG2GA5TATC6GACA1TCCT1CG2TC2AG14CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CTACAT1CA1-G-T-G3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6T-T-3ATA-2GATC7GA8GTCT8CT15CT7TACT11GA3AC1AGTG7AG-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6GA1CT6ATTA3TA3AC4AG21-N-N11AG6CGACTA2AG5AGTG8AGTG3GAAG3-N-N-N-N-N-N-N-N-N-N-N-N3AC1CTAT1GACT4TG3-N-N-N-N-N-N2GA2GA2GA7GA5CAAT4ACAC-N-N-N-N-N-N8TC37AC3CT20TC14TC1CG3GA1CT9TA5CT14AT2TC5CT4AGCT9AG3GTATTC3AG6GA14CT12AG10AG2GA6GAACGA32GA11AG24CA4CT1CT3GTTG-C-C-A-C3ATGAAC1TN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AGGC2CTTC2GTAGAGGC5TC1GC3TCA-A-T-5TC3AC1CA1TA2AGTC3A-2GA1TGGAAGTA2TA1GCGC-A4AC1AG1GAAC7CT10CTCG2TCGA2AGGACA10AG1GCTAAG7ATAGTCTGTG2GA11AG6AC10ACGA1TC1AG2AGTCGC1TG1TACT3TNANTNANGNGNTNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1-A-C2GA3TC2CTAT5GATC1CA17-N-N-N8CT1TGTG2GT14TC8CT2GA7TA17GAAT3AG4TG5TC2AG2AG2AG1AC3TC1ACAG14GA-N-N-N5TC13GAGA5AG12CT2CT4CA15GA5GAACGTGN-N-N-A2GA4TC1AG4GC7CAAT4CT3AG1TA5TC11GC2GT4CA7GCCAAG3GATA18CT18CACA4-N-N-N-N-N-N2GA5GAAC4GA9GA2-N-N-N-N-N-N-N-N-N-N-N-N1GA1GC1TA14AC-N-N-N-N-N-N-N-N-N-N-N-N3CAGA6CT4TA1CG4CTAGAG4ACCAAC3GA2AG1CA2AGAT6AG4GACATAAGAC1AG1AGTC3GAACGTACATCT1AC2TCGCACGT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA1CA4GA1GTAC3CT2GA10CT6TC6ACTA13GA4GA14TC3TA1ACGTTC1CGAG11GATC2TATG1GACNANTNANANTNANANTNGNGNGNANGNTNANGNTNANCNTNANCNANGNGNGNTNCNANANGNTNANGNCNANGNTNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-T-A-C2GT1CG2-C3CT2AT8CT1AG13AG2-N-N-N21ACAG10GA2CACATC5CTAGGC4CACGAC4GC1-N-N-N2CTGA1GC14GTTC4AGCT1AG14GAAC1TGGNANCNGNCNTN-N-N-N-N-N-N-N-N-N-N-N-N2CTGAGAGT2CT1AGCT2CT-A-A-T17AG13GAGA9CA15GA3CT9AG11TC5GA17CA1GA3ANGN-N-C-A6-G-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2A-19-N-N-N-N-N-N2TACA1CG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CTTA5CA37AG30-N-N-N-N-N-N-N-N-N14TA8GA7AG4TC6GA9GA12AT7AG17CT59GA3CA7TC22AC4GA7TC5TCAT3GCTA6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT6CGTAGAGC1TG2TG2TC3CGAGTA8CA16GA3AG3GAAG10AC1CAAGTG9CA2AGAC15CA6AG23AG1AC3AG3AC18AG7AGGA4TA2AC18AG28GA4TC15AG2AG1AG11GA26AT2AG2GT2TA7AG7-A2-N-N-N-N-N-N3GCA-3GA1-N-N-N16GA2CT2GA3CA1AG14AG2GA10AGCTTGCAAGCA6GA1TC11ATAC2AG6TA4CT2CA13CT3CA9GA12ACCA1CA2GA21CNTNTNCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G4CA-T-G-A1CG21TC1-T4T-3AGCT2TC14GT1GA8AG10GA14GA7CA4CT23TC1AC6GCAT4GACA1GC1GACT1TGTG5CG3TCAC31GA5AG3-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G8TC2AG9TA1TG6-N-N-N12AG2GA13AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3-A-C-C-C-C-T-C-C-A-A-C-A5GA-G-G-G-A-C-C-C-C-T26AG4GA3CTCT1GA4AGGA1AGTG2AG5CT5TC6-A-C-T-A-G-A5CT3GC6GTTGAG5CG7CA3AG1AG2AT5GAGNANGN-N-N-N-N-N-N-N-N-N17GA11CT17CT3GT4CT5TC2TC36AC5TC7AG6-N-N-N8TC18AC31CT19CT5TA7-N-N-N-N-N-N33GA1GC6AGGA6AGGA3ACGC-N-N-N3AG2AG1AG6CAGA4-N-N-N3TC7TC8GA5GA14GA1AG10CAAT5GA18CA5CT5AG3AC5CG15
-MK115690.1,Ref.39_BF.BR.03.03BRRJ327.EU735536,0,9689,11027,174,1,164,10088,10260,1.48e-44,179,87.931,153,plus,8AC5TC7AG6-N-N-N8TC18AC31CT19CT5TA7-N-N-N-N-N-N12-T18GT1GA1G-7
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-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,6217,703,6539,1004,7217,0.0,6711,88.467,5500,plus,23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG10-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC2ACTCGA10AG14AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4
-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,3120,6544,9281,7303,10420,0.0,2502,79.295,2474,plus,14CT5TCAGAG1-A2GAGT2AT1G-4CA1-A-A-A1AG3AG2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG34-N-N-N23TC38GA5GTGA6AC10TA12AC2GA13-N-N-N19AG9GA11AG15TC14-N-N-N16ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GACACA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-A-G-T3-G-A-A3-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA6-N-N-N4GT6AGGA31TC2AT3AC8-N-N-N21TC1AG6GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-A2AG2CAGC1GACT1GA1AT1TC4CT26AG12GA35GA22GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GT46GC3GA16AG5-A-N-N-N-N-N-N-N-NGN1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA2-N-N-N-N-N-N9-N-N-N20CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT-N-N-N-N-N-N-N-N-N-N-N-N3TC5AN-N-G5GT22GT1GNGN-N-A-T10GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1ANAN-N-N-N-N-N-N-N-N-N-N16GC9GA19TA3AG1GC4CG1CA48TC9AG4-N-N-N14CT6GA5AC24GA25AGCT13-N-N-N-N-N-N8GA5TC1TA15GT8-T-A-A-G-A-T-A-G-A7-N-N-N3CA12AC1TA2-N-N-N12AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14
-MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,11027,764,8973,9614,5,755,1.99e-137,488,75.654,578,plus,14TC3-N-N-N5ACAG18CT6GA5AC19-N5GA12-N-N14-N-NCT21GA5TC1TA7-N8GT8-G-A-A-G-T-T-A-G-A3GA1-N-N-N4TCCA12AC1TA14AGCT11-N1GAGA4GT8AG1AG6AG3AGTA5AG40ACAT10-N4AT1AN-N3-A11TC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG6AG2GN10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N6TC23-N7-N9GC18GT2CT8ACGT50-N21-N9-N16TC1-N19TNTNGT1GNAG1C-T-C-T-A-G-C-A-3GAGN1G-C-G-A-C-11-N11-G-A4-T-N-N-N-T-T-A-G-T-C-A-N-G-T-G-T-G-G-N-A13-N-N14
-MK115030.1,Ref.B.NL.00.671_00T36.AY423387,0,9126,11027,9606,60,8848,830,10422,0.0,8449,81.845,7862,plus,9-N-N-NCA12-N-N15-A-A-G-A-A-G-A7AG15CG1-N-N-N-N6-N-N3-N-N-N-N-N11GT3-A-A-N-N-N-N-N-NTN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N36CG27TCAGCGCT21AG5GA27GA20CT2CT8GT6TA13CT2GA5TA46GA8AT13GATC12AG3CGAC7AG1TG21CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA17AGCG38AG7AG5TC6-N-N-N27CT73GA11AG11TG2GA35AC2CG23GA29CT36-N-N-N-N-N-N-N-N-NCA3CA24CA5AG17GA30GATC7TC9GA24GA2TC8CT15CT4GA11GC8TA30-N-N-N9GT4TC11GA2CT14AG15TC16AC14GA14CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGATTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G8GA5GA8TCTA3GA10AG1-N-N-N1AC30AG29GN22GN2GA1GN26-N-N-N-N-N-N-N-N-NGN12AN6-N24-N-N-N-N-N-N-N-N-N-N-N-N21CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA5CT1-N-N-N-N-N-N5AG7AC1GA1ACGA3CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC33AG12AG61GA3CT10TA11GA17AG13AT29CT8TC17CT2CT52GA3TC32GA6AG11GA5AC13GA6AT16GA8TC9GA1GA23TC27CA13GA5AT21CT13TC2CT2AG10GA21AG2TC26TC5CT11AG23CT4TC10GA7AGGA13CT71TC8GAGC64AG1AG6CT7AG6GA5GA9CT4GAGAGA7CT1CTAGCA30TC5TC51CGAT9CA6ACGN4AN31GATN13CT5CT19AG27CT15GA15AC18GA11GA28CTAG12TA20GA13GAGCGA2AG51GA2AG7GA1AGCT15TA14GA26CTCATC4GACG19-N-N-N15CT4TC8GA12AGTCGA44AG23AG20GA2AG9AG40AG2GA5AG14GA8GT8AG8GA3GA2TC2CA3TA17GA12CA20GA9TCCT1AGCA12GA17CA5GA60CT17AG1TC14CG47CT4AC9AG3AG8CT1GA21-N-N-N11AG60-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC38AG2GA59CT18GC16GA15AC10GA22TCAC18ACGC8CT3CT3AG1GA23AG20TC14TC32TA32TG14TC26CT2TC31GA3CT54CT7AG3-N-N-N3TA43AT26CT44TC11GA17GA3CA59-N-N15CA12CT8CT3TGTG3AGAG7CA1GA1GA4GT4CT17CTCAAC1AC6AGAG1CT22TC7AG-N-N-N-N-N-N2AT1GA3GA7AC45CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA14AG2GA13AC2-N5TC7CTTC4AG2GA20GA11AGCGCG4-N-N-N2TC3AG11TC19AG14GA-N-N-N7AC1AC9CTCT12TC4CT6-N-N-N11GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG15TN-N-C5CATC13AG14AG4TA28CAGA24CT51-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5T-5ATGA1AC-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC37TA7AG2AC17TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT42-N-N11CA5CT5GA11ATAC12-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC8-N-N-N-N-N-N1TC1GT7AC8-T-A6CA-T-N-N-N-N-N-N32AG14TC8AC29GA6AGATGA14AC2CA23CT1GA6GA3GC3CT3GA16CAAT5CT12GA10GA14TC18CG10GA12CT35-G-C-C3TA1AT1AC1CNTNANANANTNCNGNCNCNCNTNANANCNANANTNANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GCTC1GA5AT4-G-G-T-T-C-C3TA6-G3CT-T-T4AC1-G1GT1-G-C-A3AG1TA1AT2-G-T15GA8GAGCAC4GA1GA3GA1GAT-4AG1-G4CTAT6TG2CGTAAG10GA14GA1AT1GA4GTGAATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4GT1AT13CT17AG9-N-N-N12GC1GA16TA4GA25GA5AT8AG2CT8AG3GCAC5GA16-N-N-N26AG2AG5TC3CT1GA3CT1GA2CT20GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA10GC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA8GA6-N-N-N-N-N-N-N-N-N-N-N-N8GA9AC5GA1GAAGAC1GA1TA17AC9AGTG8AG4ATAT2TA1GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC15CT5GA2AT2GA5TC12GA50ANANTNANANTNANANTNANCNTNTNGNGNAN-N-N-N-N-N-N-N-N-N-N-N-G3GTTG1CA2AC2AC1TG11-A-C-A3TC7CT5CA30-N-N-N3TATGGA16GA21CTCGAC3GA8AC-N-N-N11TC2TC11GACT2GATC3AG8ATAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA20GA38CA8AG5AG3AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG2GA14GAGNGN-N-N-N-N2-G-C1TA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG48GA2AG20-N-N-N-N-N-N-N-N-N23GA20AG24TC22CT27TA1GA12AC16GA2GA20AG16AC6CT6AGTC8AGCTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3GC8AGCATG13AT9AG1AGGA18GAAGCTAT7TC1ACCTTC8CG1AC2AG5CA9CA13CA11AG4ACGA24GAAG3TA3CA1GT5AG35CT2GAAG4TG16CT1AG4GT8AG12CA22GC7TA7AG1CT-N-N-N-N-N-N1AC7-N-N-N19CTAC7GA20GA1AGCG4AGCG1ACGC7CA14CA9AT17TG9TC31CTGA1CT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AC2GC2GA2TC17GA7GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC15AG8GATC1TA9GCCT8TC16CG1CA22GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N7AGAGCA4TG5GA1GCGAG-C-1CA4CG-N-N-N-G-G12CGAG1AG5GA6ACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-13CATC9GC3CT10CT6GA10CA1TC13C-A-G-C-A-G-3CACT3AG3AC1GNTN-N-N-N-N-T-G2CT3CG2GA9CG11GNANGN-N-N-N-N-N-N-N-N-N35GA21CT1AG3AC34TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C38TCAC8GA5-N-N-N1GA2TA15CT-N-N-N6ACGA3CTGAATAG1AG2TAGA5AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA28GA11CA1GA11TC3
-MK115498.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9461,11027,6391,542,6495,830,7217,0.0,6748,87.764,5609,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-NANANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC13GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT10AG11-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-MK114856.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9477,11027,693,8845,9441,5,697,2.89e-129,461,76.768,532,plus,14TC1GC1-N-N-N4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN5AT24TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG11-GAN1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG6AG2-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG11-N-N-N6TC7AG3AG4CT1AG4-N7-N9GC21CT10AG30AG18AN1AG-G18-N9-N18-N19-N-N2-N6-N12-N2-G5
-MK114856.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9477,11027,237,9226,9433,10645,10881,5.38e-45,181,83.544,198,plus,5-N2AG3AG3CN1-T-N1AG4-N6-N9-N-N-N1GC10-N11CT2-N8AG1-N21-N7-N-N1AG12-N-N-N-N-N7AGAG3-N10-N7-N6-N13-N27-N-N-N-N-N17
-MK115009.1,Ref.B.NL.00.671_00T36.AY423387,0,9207,11027,9610,186,8984,830,10422,0.0,7732,79.188,7610,plus,9-N-N-NCA12-N-N15-A-A-G-A-A-G-A7AG15CG1-N-N-N-N6-N-N3-N-N-N-N-N11GT3-A-A-N-N-N-N-N-NTN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15TG20CG3AG12AG10TCAGCGCT9AGAG10AG5GA17AG9GA20CT2CT8GT6TA13CT2GA5TA2AG43GA8AT13GATC9CT2AG3CGAC7AG1TG21CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA8AG8AGCG1ACTA24AG10AG13TC6-N-N-N27CT8AG41AG1AG20GA11AG11TG2GA10AG24AC2CG22AG9AG20CT24AG3AG7-N-N-N-N-N-N-N-N-NCA28CA5AG14AGAG1GACT4CT24GATC7TC9GA4AG7AG10AG3TC8CT2AG12CT3AGGA11GC8TA10AG18-G-N-NAN9GT4TC11GA2CT14AG15TC16AC15AG1AG11CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGGTTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G7AGGA4AGGA8TCTA2AGGA10AG1-N-N-N1AC28AG1AG4CT5AG17AGGN5AG7AGAG6AGGN4GN2AG23ANANGNANGNANCNCNANGN1C-T-AG4-A5AN6-N1AG22-N-N-N-N-N-N-N-N-N-N-N-N3AG7AG9CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA17AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA4-C2-N-N-N-N-NCN5AG7AC1GA1AC4CA1AG5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC32AGAG12AG2AG16AGAGAGAG5AG2AG29GA3CT10TA11GA17AG10GA2AT12AG16CT6AG1TC17CT2CT33TC7AG3AG6GA3TC32GA6AG11GA5AC1AG9AGAGGA6AT8AG7GA8TC9GA25TC8AG1AG16CA13GA5AT10AGAG9CT2AG10TC2CT2AG32AG2TC2AG23TC5CT11AG23CT4TC10GA6AGAGGA3AG9CT15AG3AG4AG46TC8GAGC31AG15AG16AG1AG6CT7AG12GA9CT6GA3AG3CT1CTAGCA12GA12AG4TC5TC4AG3AGAG24AG16CGAT9CA6ACGN2AG1AN25AGAG4GATN6AG6CT5CT7AG11AG21AG5CT15GA15AC18GA40CTAG12TA20GA11AG1GAACGA2AG5AG44AGGA2AG7GA1AGCT3AG11TA14GA26CTCATC4GACG12AGAG5-N-N-N15CT4TC16AG1AG2AGTCGA9AG18AG11AGAG2AG23AG3CT3AG12GA2AG12AG20AG2AGAG12AGAG1GA5AG3AG9AGGA8GT6AG1AG8GA3GA2TC2CA3TAAG16GA4AG7CA20GA9TCCT1AGCA12GA17CA3AGAGGA60CT10AG6AG1TC10AGAG2CG12AG6AG27CT4AC1AG7AG1GA10CT5AG10AG6-N-N-N11AG16AG16AG26-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC6AG31AG21AG13AG21AG4CT18GC16GA15AC21AG11TCAC18ACGC8CT3CT3AG7AG10AG2AG3AG1AG16AG1TC14TC9AG8AG13TAAG27AG3TG14TC26CT2TC2TC28GA3CT54CT7AG3-N-N-N3TA18AG24AT26CT44TC11GA17GA3CA4AG6AG47-N-N11AG3CA12CT8CT3TGTG3AGAG7CA1GA1GA2AG1GT4CT17CTCAAC1AC6AGAG1CT22TC3AG3AG-N-N-N-N-N-N2AT1GA3GA7AC8AGAG32AG2CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA6AG7AG1AGGA12AGAC2-N5TC7CTTC4AG2GA20GA11AGCGCG4-N-N-N2TC3AG11TC19AG7AG5AGGA-N-N-N2AG6AC9CTCT12TC4CT6-N-N-N9AG1GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG3AG11TN-N-C5CATC9AG3AG14AG4TA28CAGA24CT7CG4AG30AG7-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5TAGT1CT3GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT8CT2GC37TA7AG2AC10AG6TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT9AG32-N-N5GA5CA1AG3CT2AG2GA8CA2AT12AG-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC5AGAG1-N-N-N-N-N-N1TCAGGT1AG5AC8-T-A2AGCA2CA-T-N-N-N-N-N-N4AG16AGAGAG8AG1AG12TC8AC29GA6AGATGA10AG3AC2CA23CT1GA6GA3GC3CT20CAAT5CT4AG7GA10GA14TC13AG4CG10GA12CT35-G-C-C3TA1AT1AC1CNTNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GC1CACA3CT1AT2AC1AGCG2GCTC1GA8CG5ATTGAG1TAACTA2ATAG1AC2A-A-G-9AGAT15GA8GAGCAC4GA1GA5GAT-4AG1-G4CTAT6TG2CGTAAG7AG2GA14GA1AT6AT1ATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4AT1AT13CT17AG9-N-N-N12AC1GA16TA4GA8AG16GA5AT8AG2CT3AG4AG3GCAC5GA16-N-N-N12AG13AG2AG5TC3CT1GA3CT4CT18AG1GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA9AGGC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA6AG8-N-N-N-N-N-N-N-N-N-N-N-N8GA4AG4AC6-G2AC2GA2TGA-15AC9AGTG8AG4ATAT2TA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC11AGAG2CT5GA2AT2GA5TC16AG44AG1ANANTNANANTNANGNTNANCNTNTNANGNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGTTG1CA2AC2AC1TGAG4AG5-A-C-A3TC7CT5CA30-N-N-N3TATGGA12AG3GA21CTCGAC1AG1GA8AC-N-N-N11TC2TC11GACT2GATC3AG6AG1GTAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA3AG5AG9AGGA7AG7AG22CA6AG1AG5AGAG2AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG1AGGA15-N-N-N-N-N-N1GCAG2TA1AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG6AG7AGAG19AG12GA2AG7AG12-N-N-N-N-N-N-N-N-N23GA20AG24TC15AGAG5CT16AG10TA14AC1AG15AG1GA4AGAGAG13AG16AC6CT6AGTC9CTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3AC6AG1AGCATG10AG2AT5AGAG2AG1AG19GAAGCTAT7TC1ACCTTC8CG1AC2AG5CA9CA13CA11AG4ACGA1AG11AGAG4AG4GAAG3TA3CA1GT1AG3AG1AG21AG6AG4CT2GAAG2AG1TG16CT1AG4GT13AG7CA1AG20GC7TA7AG1CT-N-N-N-N-N-N1AC3AG3-N-N-N15AG3CTAC6AGGA4AG2AG3AG8GA1AGCG4AGCG1ACGC7CA2AG11CA6AG2AT17TG9TC13AG12AG4CTGA1CT3AG5AG8AG6-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AGAGAG2AGAG5AC2GC2GA2TC1AG2AG12GA4AG2GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC3AG9AGAGAG8GATC1TA9GCCT8TC16CG1CA21AGGAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N3AG3AGAGCA4TG5GA1-C-A-T-A3CGTGCNANAN2C-1AG10CGAG1AG1AG3GA1AG3AGACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-9AG3CATCAGAG3AGAG2GC3CT10CT2AG3GA10CA1TC13C-A-G-C-A-G-3CACT7AC1GNTN-N-N-N-N-T-G2CT3CG12CG2AG2AG1AG3GNANGN-N-N-N-N-N-N-N-N-N2AGAG31GA15AG5CT1AG3AC22AG11TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C3AG3AG30TCAC1AG6GA5-N-N-N1GA2TA1AG13CT-N-N-N6ACGA3CTGAATAG1AG2TAGA3AG1AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA30AG9CA1GA11TC3
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,6394,178,6131,830,7221,0.0,6752,87.739,5610,plus,9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N13-A-A-N-N-N-N-N-N-N-N-A11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24TA24ACAG27AG10GA57CT2CT5TG9AT4GA2AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG9-N-N-N17GA8GA4TC13ACGATC1CG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GT12CA31GA23GA20CT2TC3-N-N-N5GA2AG23GA95GA42GA13AG50AG10CG10-N-N-N-N-N-N-N-N-N1GA27CT32GA30TC9AG49GATCCT17AT2GA5TG26AG3-N-N-N11AG41AG2AT35GA2GA14AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGAC2TC40-N-N-N1CT35TC50GA28-N-N-N-N-N-N-N-N-N20-N20CA3-N-N-N-N-N-N-N-N-N-N-N-N15CT17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N3GA13TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGA6GA7TC2-N-N-N-N-N-N16GA1GA9GC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG40AG41CT97CTTC68CA6TC19TC20TC8AG12CA88AG8AG8GA95GA11AG41CT20GA6AG35AG11AG43TC85TC24GA38CT53AG11CTTC6AG7TC1GT11TC20CT8GT59CA5TC27CT7AG26TCGC13GA2AG19AGGA3GA7GA11GA4AC39GA2AG59GATA22GA50GA10CT7AG64GA12-N-N-N2CT4GA9AG8GA2AG11TA2CA11AG23CT14CT32AG5AG8TC2TA14TC23TC37GACT14GA6TA31AGCT1GA10GA6AT11AG39CT7AC18ACGAGA12AT39GA6CT2TG77CA8GA21-N-N-N2GT2GA16AG49-N-N-N17TC11-T-N-NCN8GA10CT37TC88GA8AG11CT2CT2CT17GA8GA3GA10AT8AC1CG10AG12AG18AG2GA13GT3CA71AG35CA93CA19GA6-N-N-N40AG4GA25AG2TC2TC135-N-N6CA32CTAG5AGAG6CTCAAG29AGTC35GA9-N-N-N-N-N-N65AG17CG3GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC30-N-N-N17GA12AG8GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT21GT2AG59AC9-N13CT5AG10GAAT25CTAT3-N-N-N2TC8GA2AG33AG5-N-N-N9TA31TC2-T-N-N15CT1AG16AG1CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33-N-N7TC34GA3CG10AT14AG2CT34GC37-N-N-N-N-N-N9CG3CA3AGGA18TCATCT5CT9GA7TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4T-3T-3TC-C-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG2AG23GACT4TA17GT8CA12AG11AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA1GA6TC15AC7TA2GA15-N-N16ANTNCNANANGNANGNGN1GATA11-G-T-G-G-A-G-A-T-G-G-G-G14TC12AG-N-N-N-N-N-N13AG4AG2GA4CACA1GA-N-N-N-N-N-N1GT35GAAG7AC37AGGA8CT55AG5AT1AG1GT6AG6GA16GA3AG10TA38TC14GA3CT18CG6TG2TC6AT1TG1GA4
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,3077,6162,8926,7345,10420,0.0,2414,78.648,2420,plus,5AG2GA1CA7AT12CG11AGGA1AG4AG2AC1AG6GTCAGT3CT11AC5TA2GA2GCAC7GA1AT2GT1ACAT1-C-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANTNANANCNANGNTNANGNTNANCNCN2AC4GA5TC2AG14CT9AG5CT3-N-N-N31TA21AG8GA13AC5GA5ACGA26-A-N-NGN19AG52-N-N-N3AG1GA10AT4AT4AG6AG6AC13TC4GCGAAC1GT1CTAG2CG5TATACT4TC26-G-A-A-T-C-C4ACAC1TG1TG19TGATCT4CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1TA3ANTNAN3GA1CT2-G-N-N-N-N-N-N-N-N-N-N-NAN2GA21-A-G-A1GC3TA28CGACCA5GA2AG5CT1-T-G3TACT2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCN1CA3A-12TGTCCA4GT16GA8AG26CT5TC9TA2TCCA15CT3ATCT3-T-N-N-N-N-N-N-N-N-N-N-N-N-N-NANANANTNGA5GT1TG3-A-C2-AGACGAG3TA3GA1TC3CG1-A-G3-G2GATC1ACTA5AC4AC22-N-N-N3CA8GAGA44-G-A-NANCN3AT20GC1TA14GT2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN2GTGATGGC1TATC5AGAT1TC4CT3TC15AG6AG3TC37GA16AG19AG3-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG5GA11-G-N-N-N-N-NAN3CA1GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT25CA20GC5AGGA9AT10-N-N-N-N-N-N-N-N-N1GA1GT19AG42TC25TC18GA23CA16AG2AGCA35AG14CGGC7GA2GNGNGNCNANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT3ATAC3AG2TAGC1CG6GAGA1AC3TC18AC1AG7GA20TC2AT8AGCA6AG2TATACA3AG28CA34GA5TA2CA1AT18AT69AG15CT11AG10TA7GA1TC-N-N-N-N-N-N9GN-N-N-C27GA17AG2GA7GAGT17TC3AG20AG35CA17GA1TCCG24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N38GA5CT29CT11CTAG7TC4TC9AG12AG1AT6AG2TG5AG2AGTC1GT8TA3TG12GA17AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N28AGGT1GN-N-N-A8ACAC1GA1AT2GA15CNGNANGNCNTNCNANGNCNCNANANCNANGNCNANGNANTNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA17AC14TC8CA1TC8GC14TC7AC33TGGNANGN-N-N-N-N-N-N-N-N-N16GC21CA8TC2AG6CG7GT39GA2TC9AG3GA-N-N-N41TC10GA25AG10CA3-N-N-N-N-N-N16TA13CG11CA2GA11-N-N-N3GA12AC4CN-N-N-T11CG6AT23AG7CT3TA21CA12AG11ACAT11TA2
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,355,8609,8947,5,359,6.92e-95,346,86.761,308,plus,11GA2TC3-N-N-N5ACAG3GA41TC5-N5GA12-N-N14-N-N10CA19TA7-N6CG10TGCA2GT7GA1-N-N-N4TCGA12AC4CT11CG6AT5-N1GA16AG7CT3TA21CA24ACAT10TN1-A2AT1AN-N3-A11AC3
-MK115387.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9136,11027,187,8958,9136,449,635,1.31e-53,209,92.513,173,plus,11-N-NGNAGAG21CT6-N7-N9GC18-T56TG6-N21-N9-N9
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-MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,11027,6391,619,6571,830,7217,0.0,6745,87.748,5608,plus,9-N-N-N8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-NANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC4AG8GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-MK115065.1,Ref.B.NL.00.671_00T36.AY423387,0,9214,11027,9433,215,8893,1002,10422,0.0,8430,82.254,7759,plus,36CG27TCAGCGCT21AG5GA27GA20CT2CT8GT6TA13CT2GA5TA46GA8AT13GATC9CT2AG3CG8AG1TG14AG6CT4CA14GA3-N-N-N15-C-G-G-G-C-AAC2-C-A-A5AG7CA7AG7CA1GA2G-C-1AC1AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNCNANGN8AG20CT2AC2GA17AGCG2TA35AG13TC6-N-N-N27CT73GA11AG10CATG2GA35AC2CG23GA29CT36-N-N-N-N-N-N-N-N-NCA25TA2CA5AG17GA30GATC7TC9GA24GA2TC8CT15CT4GA11GC8TA30-N-N-N9GT4TC11GA2CT14AG15TC16AC14GA14CT2GA2AG14AG9-N-N-N-N-N-N-N-N-N10AGATTG2-N-N-N-N-N-N-N-N-N-N-N-N-N-NGN3-G8GA5GA8TCTA3GA12-N-N-N1AC30AG4CT5AG18GN22GN2GA1GN26-N-N-N-N-N-N-N-N-NGN12AN6-N24-N-N-N-N-N-N-N-N-N-N-N-N3AG17CT26-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A3-C-C-A-C-C-N-N-N-N-N-N-N-N-N2CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA5GA5CT1-N-N-N-N-N-N5AG7AC1GA1ACGA3CA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG9AG1ACTA7AG5AG5AG5AG14TC33AG12AG65CT10TA11GA17AG13AT29CT8TC17CT2CT52GA3TC32GA6AG11GA5AC13GA6AT16GA8TC9GA25TC27CA13GA5AT21CT13TC2CT2AG32AG2TC26TC5CT11AG23CT4TC10GA7AGGA13CT71TC8GAGC55TC8AG1AG6CT7AG6GA5GA9CT4GAGAGA7CT1CTAGCA30TC5TC51CGAT9CA6ACGN4AN2AG28GATN13CT2AG2CT19AG27CT15GA15AC18GA11GA28CTAG12TA20GA13GAGCGA2AG51GA2AG7GA1AGCT15TA14GA26CTCATC4GACG19-N-N-N15CT4TC8GA12AGTCGA44AG23AG20GA2AG50AG2GA5AG14GA8GT8AG8GA3GA2TC2CA3TA17GA12CA2TA17GA9TCCT1AGCA12GA17CA5GA60CT17AG1TC14CG47CT4GC9AG12CT1GA21-N-N-N11AG60-N-N-N17CT3GA4GA3-N-N-N3TC11CG1TC38AG2GA59CT18GC16GA15AC10GA22TCAC18ACGC8CT3CT3AG1GA23AG20TC14TC65TG14TC26CT2TC31GA3CT54CT7AG3-N-N-N3TA43AT26CT44TC11GA17GA3CA59-N-N15CA12CT8CT3TGTG3AGAG7CA1GA1GA4GT4CT17CTCAAC1AC6AGAG1CT22TC7AG-N-N-N-N-N-N2AT1GA3GA7AC45CT8AC15AG12GC17GA3GA17CTCG37GA16AG1ATGT6TC17GA12-N-N-N8AG2CT5AG9TC2AG3CT16-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT15CT7CGAG3TC1AG8CT12TC3AG2GA14AG2GA13AC2-N5TC7CTTC4AG23GA11AGCGCG4-N-N-N2TC3AG11TC19AG14GA-N-N-N9AC9CTCT12TC4CT6-N-N-N11GA14GA5AC4TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4AGGAAG6CT3AG15TN-N-C5CATC13AG14AG4TA28CAGA24CT51-N-N-N-N-N-N9GA2TC4CGAGGA8AC8CTGAGT2CT2CT2GA11TA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5TAGT1CT3GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC37TA7AG2AC17TA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT42-N-N11CA5CT5GA2GA8AT13-N-N-N-N-N-N-N-N-N-N-N-N6TA2TC8-N-N-N-N-N-N1TC1GT7AC8-T-A2AGCA2CA-T-N-N-N-N-N-N32AG14TC8AC29GA6AGATGA14AC2CA23CT1GA6GA3GC3CT3GA16CAAT5CT12GA10GA14TC18CG10GA12CT35-G-C-C3TA1AT1AC1CNTNANANANTNCNGNCNCNCNTNANANCNANANTNANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG2GCTC1GA5AT4-G-G-T-T-C-C3TA6-G3CT-T-T4AC1-G1GT1-G-C-A3AG1TA1AT2-G-T15GA8GAGCAC4GA1GA3GA1GAT-4AG1-G4CTAT6TG2CGTAAG10GA14GA1AT1GA4GTGAATANANTNANCNTNANCNGNGNGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGAT4GT1AT13CT17AG9-N-N-N12GC1GA16TA4GA25GA5AT8AG2CT8AG3GCAC5GA16-N-N-N26AG2AG5TC3CT1GA3CT1GA2CT20GTAN-N-N-G14GACACA3CT2TA1GAAG5GA1TC23TGAG8AG25TC10GA9CT3-N-N-N-N-N-N11GA10GC3-A-N-N-N-N-N-N-N-N-N-N-N-N-G-G3CA15-N-N-N-N-N-N-N-N-N-N-N-N8GA9AC5GA1GAAGAC1GA1TA17AC9AGTG8AG4ATAT2TA1GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N16CA1CTAC15CT5GA2AT2GA5TC12GA50ANANTNANANTNANGNTNANCNTNTNGNGNAN-N-N-N-N-N-N-N-N-N-N-N-G3GTTG1CA2ACCT1AC1TG11-A-C-A3TC7CT5CA30-N-N-N3TATGGA16GA21CTCGAC3GA8AC-N-N-N11TC2TC11GACT2GATC3AG8GTAG1CTANANCNANANTNAN-N-N-N-N-N-N-N-N-N-N-N-G2AGGATG2TCGA3-G2-C-C4CT3CT2GA20GA38CA8AG5AG3AG11CA1TG9-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG2GA15GNGN-N-N-N-N2-G-C1TA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA1CG48GA2AG20-N-N-N-N-N-N-N-N-N23GA20AG24TC22CT27TA1GA12AC16GA2GA20AG16AC6CT6AGTC9CTCNCNTNANGNANTNGNGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GA6AG3GC8AGCATG13AT9AG1AGGA18GAAGCTAT7TC1ACCT9CG1AC2AG5CA9CA13CA11AG4ACGA24GAAG3TA3CA1GT5AG35CT2GAAG4TG16CT1AG4GT21CA22GC7TA7AG1CT-N-N-N-N-N-N1AC7-N-N-N19CTAC7GA20GA1AGCG4AGCG1ACGC7CA14CA9AT17TG9TC31CTGA1CT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AC2GC2GA2TC17GA7GT7AC3AG1AGAG6AT5CT3CT1CT2CTAG3CT3AT11TC15AG8GATC1TA9GCCT8TC16CG1CA22GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N7AGAGCA4TG5GA1GCGAG-C-1CA4CG-N-N-N-G-G10AG1CGAG1AG5GA6ACGA1CNGNANGNCNTNANGNGNCNCNANGNTNANANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C4CTA-13CATC9GC3CT10CT6GA10CA1TC13C-A-G-C-A-G-3CACT7AC1GNTN-N-N-N-N-T-G2CT3CG2GA9CG11GNANGN-N-N-N-N-N-N-N-N-N35GA21CT1AG3AC34TA6AG8AC3GA4-N-N-N5CT15CG5AC22CT3CG1GT20AGGA6TA7TNGNTN-N-N-N-A-T-C38TCAC8GA5-N-N-N1GA2TA15CT-N-N-N6ACGA3CTGAAT2AG2TAGA5AG2GA2GT3GCACAGCG1CG1GA9GACGAT5GA28GA11CA1GA11TC3
-MK115464.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9663,11027,6392,680,6633,830,7221,0.0,6452,86.076,5502,plus,9-N-N-N13-N-N17-N-N-N-N-N-N21AG2-N-N-N-N6-N-N3-N-N-N-N-N13-A-A-N-N-N-N-N-N-N-N-A11-N-N-NAG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AGAG13TA24ACAG27AG10GA57CT2CT5TG9AT7AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG9-N-N-N17GA8GA4TC8AC4ACGATC1CG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GT12CA31GA19AG3GA20CT2TC3-N-N-N5GA2AG23GA95GA10AGAG30GA75CG2AG7-N-N-N-N-N-N-N-N-N1GA27CT20AG11GA30TC9AG49GATCCT17AT8TG10AG15AG2-G-N-NAN11AG32AGAG7AG2AT35GA17AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGAC2TC40-N-N-N1CT28AG6TC79-N-N-N-N-N-N-N-N-N20-N1AG18CA3-N-N-N-N-N-N-N-N-N-N-N-NAG9AG4CT17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC1AG3-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGA6GA7TC2-N-N-N-N-N-N16GA1GA5AG3GC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG40AG5GA35CT17AG16AG17AGAG11CT30ACCTTC68CA6TC14AG4TC20TC8AG12CA7AG8AG3AG67AG8AG3AGAGAG2GA12AG61AG19AGGA11AG16AGAG12AG10CT6AG13GA6AG10AG5AG18AG11AG9AG33TC3AG9AG35AG4AG30TC24GA32AG5CT9AG17AG25AG11CTTC6AG2AG1AG2TC1GT11TC20CT8GT5AGAG52CA5TC27CT4AGAG1AG11AG14TCGC3AG9GA2AG19AG4GA7GA11GA4AC38AG3AG22AG36GATA11AG10GA50GA10CT3AG3AG64GA5AG6-N-N-N2CT4GA9AG8GA2AG7AGAG2TA2CA1AG9AG16AG6CT4AGAG8CT25AG6AG5AG5GA2TC2TA14TC12AG10TC1AGAG12AG21GACT14GA6TA31AGCT1GA10GA6AT11AG39CT2AG4AC18AC1GA12AT46CT2TG4AG16AG5AG2AG32AG13CA12AG17-N-N-N2AT2GA3AG12AG5AGAG42-N-N-N3AG13TC11-T-N-NCN9AGAG8CT4AG20AG11TC34AG21AG31GA8AG11CT2CT2CT17GA1AG6GA3GA10AT8AC1CG10AG12AG11AG2AG3AGAGAGGA13GT3CA25AG45AG35CA93CA19GA6-N-N-N40AG4GA25AG2TC2TC79AG55-N-N6CA32CTAG5AGAG6CTCAAGAG28AGTC35GA9-N-N-N-N-N-N25AG33AG5AG19AG1GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC30-N-N-N17GA12AG8GA11-N-N-N-N-N-N-N-N-N-N-N-N4CT21GT2AG51AG7AC9-N13CT5AG10GAAT25CTAT3-N-N-N2TC11AG22AG10AG5-N-N-N2AG1GA4TA31TC2-T-N-N10AG4CT1AG16AG1CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21AG11-N-N7TC34GA3CG10AT14AG2CT25CT8GC37-N-N-N-N-N-N9CG3CA3AGGA18TCATCT5CT9GA7TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2TCACTA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG2AG23GACT4TA15AG1GT8CA12AG11AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA1GA6TC15AC7TA1AGGA15-N-N16ANTNCNANANGNANGNGN1GATA8TC4AG5AG-G-G-G-G-T-G-G-A-G-A-T-G5TC10AG1AG-N-N-N-N-N-N13AG4AG2GA4CACA1GA-N-N-N-N-N-N1GT19AGAG14GAAG7AC37AGGA8CT11AG43AG5AT1AG1AT6AG6GA16GA3AG10TA28AG9TC14GA3CT18CG6TG2TC6AT1TG1GA4
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GCCTAC2GC2GA5GT1AG3TC5GA7AG10AC7TG5ACGA10CT2CT23AGAG1GA7AGGA3AT6TCAT2AG5AT1GCCTTGTG7AG2CA12CG1CA16AG4AGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N9GN-N-A2AG2TA7TG5GA3GTCATG2GTGA-N-N-N1CT1AG8GACACT4AGAG8GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1GA1TCACGCGT6A-4GC1C-A-G-A-G-4CT4AGCATAAGAG3AGAG6CTAC13AG3AG9CA1TC11TC6GA3CACT3GC4TCGA1TG5CG2AG9CG4AT2AGAG2GNANGN-N-N-N-N-N-N-N-N-N5TC2TC14GA2AG2TC5GA14AG5TCCT1AC3AC2AG2CTAT27TA11CT4AGAG1GA4-N-N-N5CG11GA3CG1CT2CTAC10CA11CT18AG7AG5AG1TA4CT2TNGNTN-N-N-N-A-C-C3AG1AG21GA4TC5TGAG8GA5-N-N-N1GA2TA16-N-N-N3TC2ACGA4GAATAG1AG2TAGA3AG4AG2AG2CT3CG10AGTC2CGAT5GA9CT1GA8TA3TG5GA11GA11TC1AT1-N-N-N-N-N-N-N-N-N12
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-MK115576.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9266,11027,6379,357,6300,842,7217,0.0,6739,87.772,5599,plus,8GA4-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-NANANANTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA14-N-N-N17GA8A-G-T-15-ATG7GC2AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-T15CT12CA23CG2CA43AG5CT6-N-N-N8CG86TC17AG33TG99CG5CT4-N-N-N-N-N-N-N-N-N29CT18TC22GA17TC8TC4AG47GA4TC7TC48-N-N-N9TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG27-N-N-N-N-N-N-N-N-N5-A-A-C7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4ACTCGA25AG12-N-N-N37TC5AG54TC11CT5-T-N-N-N-N-N-N-N-NAN20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG14CT2CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN8TC7TC1-N-N-N-N-N-N15AG1GT12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28-G-N-NAN13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT23-N-N-N2AT2CA36GA10TCAC1AG2CA12-N-N-N30-N-N-N4AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA6-N-N-N45GA28TC44TC17GA11AG17CA45-N-N15CA21CT8AGAG4AG3AGAG30AC44-N-N-N-N-N-N12GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC30-N-N-N8CA21AGAC8CT9GAANGN-N-N-N-N-N-N-N-N-N-N3-A-T12AG10GC25GA3AC30TC9-N5TC16AG14GT18CACTGT3-N-N-N14AG26CT6AG5-N-N-N5GA13CTCT20TC2-T-N-N7CA26AG2GATCGT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CG31-N-N24CT21CG7TC2CT46AC43-N-N-N-N-N-N13CA3AGGAGA10GC6AC25TC5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7CA1GA1ACCA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT11GC4AG8GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2GAGA21AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2TA1GA5GA3AG-T-G-G-A-G-A-T-G-G-G-G-G23GT3-N-N-N-N-N-N30-N-N-N-N-N-N8GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT4
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-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,7211,18,6691,5,7212,0.0,7482,87.408,6303,plus,18-N-N-N3CA1ACAG9GT15GA4TC2TC8TC1TA6-N5GA1GC1TG8-N-N14-N-N30TA4TC2-N8GT8TG3GT7GA1-N-N-N4TCGA10TC1AC1TA14AG6AT5-N1GA5GT44GA7GA4GA23-N4AT1-N-N3GA12CG1-G-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCNANANGNANANCNTNGNCNTNGNANCNANANCNGNANGN3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN30-N7-N9GC36AC42GA2-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N7-G1TG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N-N6TC6-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N1CT13-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC97CT3AG14GT20TC8TC7GA28AG16TG35GA19CT5GC18-N-N-N8CT8GA27AC6GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTNTNANGNANCNANCNANCNANGNGNANANANCNANGNCNANGNCNCNANGN23AG6CA1TC81-N-N-N8AG50TC11TC75CG1AG20CT76CG10-N-N-N-N-N-N-N-N-N1GA27CT41GA8TC93AT38-N-N-N32CT20AG41GA8AC5AG27-N-N-N-N-N-N-N-N-N2CA12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAGGC1GA16GA11AG12-N-N-NGACT27GA5TC1TC5AG73-N-N-N-N-N-N-N-N-N20-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-NAG20CT11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-NANCNCN8TG8TC2TG2-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N6AG8AG14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA9AGAG46GA26GA23CA4AG3AG73CT117TC8AG101AG14AG119GA69TC38AG37CT86TC22AT5CA2GA9AC2GA26AG29AG6GA13AG19AG7TC4TC2CA17AG26GT48AG1CA32AGCT7AG5AG32GA4AG21GA24GA4GA18TC19GA26GA51GC4AC10TA52GACT55GA8GA19-G-N-NAN1TC11GA3AG77CT2CT14AG47TC29AG6ATAT22GA1CT21TA10TC33CT19AG35CT5GA24AC21GA12AG5GA20CT59TC21TC19GT9-N-N-N72-N-N-N26GA3-N-N-N20AG8GA27TC26AG49CT11GA20CT5CT41AT21AG2AGAC8AG21GA17CA203CA5CT6CT11-N-N-N4TC40GA28TC26TA111-N-N15CA30AG9AG23TA7ACAC8AG27GA1AG4-N-N-N-N-N-N6CT61GA50CA26CT8TC11AC14TG3AT19TC30-N-N-N17GA33-N-N-N-N-N-N-N-N-N-N-N-N4GT9CT13AC3GA2AG5AG47TC9-N5TC24GA27AT3-N-N-N6AG11TC19AG14GA-N-N-N33TC7TC2-T-N-N17AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33-N-N6GA34GAGA13CA3TC11AG2CT25CT8GC37-N-N-N-N-N-N6CA6CA3AGGA11GC6GC1CT5CT23-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC7TA2AC2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG14CT11GACT4CA26CA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA24AC3GT22-N-N5AG5GA2GA1ANTNCNANGNGNANANGN2TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT6TC1TA10AG-N-N-N-N-N-N16AG10CA2CNANAN-N-N-N8TC29AG7AC37AGGA66GA5AGAGAT21TC6GA5AG22AG27TC16GA5TC13CG1CT4TG6AG2
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,3128,6686,9495,7303,10420,0.0,2573,80.083,2505,plus,10CA3GT5TC2-G-A-G2-T-G3CA1-G-G1CGCA2-G-GTA2AG2GA15TA3CT1GAAGAC3GAAG8AG4AGAT1-C5G-9CT8GA11GA4CA6GA1GT4AC2-C-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNANANTNANANGNANGNTNANANTNANANTNANTNTN5T-T-C-2GA3AG1TC6CT11TC8AG9-N-N-N62GA6GA6ACAG14GA23-A-N-NGN14TA53CA3-N-N-N10AG4AGGT10AG28AG2TCGAAC1AT5AG40TA2AC1CG3-C-C-A-G-A-G19TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA1CA3ANTNAN3GA1CT2-G-N-N-N-N-N-N-N-N-N-N-NAN20CTTACG9CA4CAAT21GAAGAC6GA2AG9AGGAGA1AT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG1CACA20GAGA6TC16AG30CA19ATATGTGA1GTANCNTNANANTNGNGNGNANTNTNTNGNGNANCNTNCA3TC1GT1A-4C-A-1AC3T-2T-1CG1ACCATA2CA5AG2TG2T-5TC2TA5AC4AC3TC1AG5GAGA9-N-N-N3TA8GA33AGAT11-A-N-NCN4TC6CT18GATC12-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NCN4AG2CAGC2CT1GA1AT18TG9AT76GA10-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8GA8-A-G-T-G-N-N-N-N-N-N1AGCA2TA2-A-N-N-N-N-N-N-N-N-N-N-N-N-NGNAN3CT46GC3GA23-N-N-N-N-N-N-N-N-N1TA21AG20AG66GA24GA45CT9AG14AG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15AC1AG9AC1TC1TC18AC9GA20TC2AT5CA13GA14AG6AC21CA25GA10CT18AT14AG32AG37CT14CT4TC5CT4GA1-C-N-N-N-N-NTN9-N-N-N20CA4GA31GAGT2CG14TC3AG6TA6TA3CT57GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14TC8CTGT6GA9AG8CT23CT11CT45AG2TG5AG18TG3TC7CG25GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N12AG13-G-T-GAT1CNTNANTA11GA20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANGNANGNCNTNGNANGNCNCNANGCCG3AT15GA30GA3CT24CG2AG37AG9-N-N-N-N-N-N-N-N-N-N-N-N16GC33AG2GA61CA2AG4-N-N-N5GT15GA4TC2TC8TC1TA11GA1GC1TG21AG14-N-N-N-N-N-N16TA4TC10GT12GA11-N-N-N3GA10TC1AC1TA2-N-N-N12AG6AT12GT44GA7GA32
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,575,9178,9686,5,579,8.49e-120,429,78.609,452,plus,18-N-N-N3CA1ACAG9GT15GA4TC2TC8TC1TA6-N5GA1GC1TG8-N-N14-N-N30TA4TC2-N8GT8TG3GT7GA1-N-N-N4TCGA10TC1AC1TA14AG6AT5-N1GA5GT44GA7GA4GA23-N4AT1-N-N3GA12CG1CGANANGNANANCNTNGNCNTNGNANCNANANCNGNANGN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12GN-N-N30-N7-N9GC36AC31
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,342,9,335,10079,10420,7.18e-98,356,87.427,299,plus,3TG2CGTA22CA2AG4-N-N-N5GT15GA4TC2TC8TC1TA11GA1GC1TG21AG14-N-N-N-N-N-N16TA4TC10GT12GA11-N-N-N3GA10TC1AC1TA2-N-N-N12AG6AT12GT44GA7GA32
-OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,11027,286,418,671,10644,10929,8.97e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N2AC18-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-OQ092463,Ref.B.NL.00.671_00T36.AY423387,0,9605,11027,9868,516,9449,569,10422,0.0,9083,83.218,8212,plus,22AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NAN7-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG9-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G6-T-A-A-A-A-A-N-N-N-N-N-NAN11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA34GA29AG33GA8GA2GA20GT5AG6AG17TC3AG13TG36AT31CGAC2AG6TG26TA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC2AG12CA7AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNCNANGNCNCNANGN1CT6AG20CTAC4GA71TC6-N-N-N113AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG18CT16GA31GA16TC19CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG11CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC1AG23TCTACT2GA5GA4AG1-N-N-N1AC15CT17TC5TC1AG18AN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N6AG2CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N5AG9GAGATC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG20TC29CA3AGCA78TCGA7CTTA11GA58AG5AGAC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG17GA17TC73TC33CT71TC74AG16AG6TA3TC11CT4GA12AGCA30TC17AT42TC10GA3ACGNTC3AN32TN22CT16AG27CT2GA12GA14AGGC15GA2GA11GA2AG59GATA13GA56GA2AG7GA1AG4AG11TA11GA3CT23AG1CT27-N-N-N8GA6CT12GA12CAAG46AG23AG20GA2AG5TC32TG8CT5GA5AG24AG7AG12GA2TC2CA3CATG2TC47GA5GA3TC64AG17TC1AG12AG17CA5AC14AG47CT3GA47-N-N-N2TA2CA26GA39-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG2GA11CT12GA31GA29GA8GA15AC30CA3AC18ACGC16AG16CT92CT17TG14TC25ATCT34GA3CT18GA43AG3-N-N-N9CA121GA17GA63-N-N6GA21CT12TGTG3AG10GAGAGA4GT6AGGA11CA4TC9AG14TA17TG-N-N-N-N-N-N2GT5GA47CT29-G-G4G-A-8GC17GA22CGGT6CT23CT24AT7TC5TG5TA18-N-N-N8AG25CT16-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT2CT6CGCG4-N-N-N5CTAG7GA17AT5AG15-N-N-N9AC3CT31-N-N-N11GA23CT1TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG6AG8TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA3AC3AG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5GAAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT25AGTC22TA1CT5AGCT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG8CT3AT38-N-N5GA2CT2GA23AT5T-G-T-8-N-N-N-N-N-N-N-N-N-N-N-N4CTGC12-N-N-N-N-N-N1TC3AG23AT-N-N-N-N-N-N47TC8AC4AG23GATA23TC26CT12GC7GA1GA12GA8CT12GA25TC18CG10GA8AG26GA9AG2TGACTC4ATCT2CTANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT4GT4CTCT2CTCGCG1ATGCTC1CACT1CA1GACA5GACTGTGT4ACGA5GCG-G-2G-9AGAT25GC1CA3GA1GA6TGGA4AG5AT6CG2TGTAAG2GA2CT26AG1ATCA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GT8GA6CT27-N-N-N12GC1GA21GA4AG20GA5CTAG10CT6TA1AG10CA13AG2-N-N-N26AG8TC3CT31GTAN-N-N-G14GA8TA8GA1TC17TG8TA13CA5TC32CA3GA-N-N-N-N-N-N10AG8TA7-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA8TG2AGAG3GA9CTAT2TA1GAGA4ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG8CTACCA14CT13CT5AG10GA26TA2AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1AGGC1TA2TG4GT1AG1-A-C-T-A-C-A2GATC5GA1CT5CA20GA9-N-N-N3CATGGA39AGGC5TACA4AGAC-N-N-N11TC15AT7AG8GTAGAGATANANTNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G5GA3CT1CG9TC2CT7AG7AG6AGGA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N56AGAG20-N-N-N-N-N-N-N-N-N29GA39TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AT7AT11TG17AG5AG23CT2GA9TC10AC5AG2CA19TA11AC3AG4AC25GAAG9GT41CT2GA5TG15GACT3GA10CT13CA16AG2GA2TC10CT6CT-N-N-N-N-N-N9-N-N-N11AC10GA28AG7AG11CT14TC69AGCT25GN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A11CGTC6GA2TC17GA7GT11AG1AGAG7AG4CT3CT7TC1CT3CT11TC11CT3AG8GATC1TA11GTGTGT5TCTA5AC28GA5GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9TA12ACGA2GATG1TG1-N-N-N1TG12TGAG1AG12ACGA1CNGNANGNCNTNGNANGNCNCNANGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C-G3AT14TC9GC3CT4AC5CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N17GA29TC4CG4GT1AG42TC2AG10GA6-N-N-N54CG1GT23AC12-N-N-N-N-N-N1CT24GA8GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092463,Ref.B.NL.00.671_00T36.AY423387,0,9605,11027,335,38,357,10088,10422,1.33e-102,372,89.851,301,plus,29-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA20GA5AG4GA9TC5GA24CA1GA15
-OQ092465,Ref.B.NL.00.671_00T36.AY423387,0,9659,11027,9870,546,9503,569,10422,0.0,9103,83.333,8225,plus,22AG2-N21-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NCN7-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG17-N-N-N-N6-N-N3-N-N-N-N-N1AT12-A-A-A-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA26GA26AG10AG33GA2AG8GA2TC17GT5AG6AG17TC3AG13TG36AT31CGAC1CAAG6TG26TA2GA11GA3-N-N-N15ACAG2TC10-C-A4-G-C-A-G-A-A-G5AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CT6AG26GA71TC6-N-N-N53CT59AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG35GA8TC22GA16TC19CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG8CT2CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC25TCTACT2GA1GA8AG1-N-N-N17CT17TC5TC1AG18AN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N9CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N2CA15CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGA17-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG50CA3AGCA78TCGA7CTTA11GA13TA50AGAC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG35TC73TC33CT71TC74AG16AG6TA3TC11CT4GA12AGCA30TC17GT42TC14ACGNTC3AN4TC27TN22CT11GA4AG11GA8AG6CT2GA12GA14AGGC18GA11GA2AG59GATA73AG7GA1AG4AG11TA14GACT23AG1CT27-N-N-N8GA6CT12GA12CAAG91GA2AG26TC11TG8CT5GA5AG24AG1TC5AG12GA2TC2CA3CATG5CA44GA5GA3TC46CT17AG17TC1AG12AG17CA2AG2AC14AG47CT3GA47-N-N-N2TA2TA66-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG2GA11CT12GA61GA8GA15AC34AC17TCGCGC16AG49AT59CT17TG14TC25ATCT2AC31GA3CT18GA43AG3-N-N-N9CA121GA17GA63-N-N6GA21CT12TGTG3AGAG9GAGAGA4AT6AGGA11CA4TC1AC6AGAG14TA17TG-N-N-N-N-N-N2AT5GA78AG12GC17GA11GA10CG7CT48AT7TC5TG5TA18-N-N-N30AG3CT1CT14-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT9CGCG4-N-N-N2AC2CTAG7GA17AT5AG15-N-N-N9AC35-N-N-N11GA23CTCATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG15TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA3AC3AG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT23TC3GA21TA1CT5AGCT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG8CT3AT16GA21-N-N5GA2CT2GA23AT5T-G-T-8-N-N-N-N-N-N-N-N-N-N-N-N4CTGC12-N-N-N-N-N-N1TC3AG11CT11AT-N-N-N-N-N-N47TC8AC28GATA17GT5TC26CT12GC7GA1GA12GA8CT12GA25TC18CG4TC14AG26GA9AG2TGACTC4ATCT3GNGNTNGNCNCNANANTNANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT6CA2CTCT1C-C-C-2AG2AT3CA1GATA2GA3CTGA1-T-T-T4ACGA5GCG-G-2G-9AGAT25GC1CA3GA1GA6TGGA4AG5AT6CG2TGTAAG2GA2CT22AGCA7-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2-T-T-A-T-A-T8GA6CT27-N-N-N6AT5GC1GA21GA4AG20GA5CTAG6CA3CT6TA1AG10CA16-N-N-N26AG8TC3CT31GTAN-N-N-G14GA8TA8GA1TC4AC12TG5TGAG15CA5TC32CA3GA-N-N-N-N-N-N10AG8TA7-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA1GC3GA2TG2AGAG3GA9CTAT2TA1GAGA4ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG8CTACCA14CT13CT5AG10GA26TA2AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1AGGC1TAAC1TG4GT3G-1ACGTGAGCTACG2AC3TAGT1CG-T5CA20GA9-N-N-N3CATGGA38CTAGGC5TACA4AGAC-N-N-N11TC11AG11AG9AGAGCTGNANGNAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G1CT4CA2CACTGAAG3TC4CT3CT7TG7AG6AGGA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANTN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N56AGAG20-N-N-N-N-N-N-N-N-N29GA39TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6ATAC4AGCAAT11TG17AG5AG1AG21CT11CTTC10AC5AG2CA19TA11AC3AG4AC25GAAG9GT41CT2GA5TG15GACT3GA10CT13CA16AG2GA2TC17CT-N-N-N-N-N-N9-N-N-N11AC13GA25AG7AG11CT14TC69AGCT25GN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A11CGTC6GA2TC17GA7GT11AG1AGAG7AG4CT3CT7TC1CT3CT11TC15AG8GATC1TA10ATGTGTGT5TCTA34GA5GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6AN-N-G8CA12ACGA2GATG1TG1-N-N-N1TG10AGACAGAG1AG12ACGA1CNGNANGNCNTNGNANGNCNCNANGNCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C-G3AT2AG11TC9GC3CT10CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N17GA29TC4CG4GT1AG45AG10GA6-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092465,Ref.B.NL.00.671_00T36.AY423387,0,9659,11027,337,66,387,10086,10422,5.07e-100,363,88.724,299,plus,13AG10GA6-N-N-N54CG1GT36-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GAAG8TC5GA24CA1GA15
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,7208,1,6597,5,7212,0.0,7146,85.752,6181,plus,14TC3-N-N-N5ACAG3GA21GA1TCCT16TCCT4-N5GA12-N-N14-N-N10CA5TC13TA7-N17TGCA2GT7GA1-N-N-N4TCGACA11AC16AG12-N1GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA28-N2-C2ACCNAN3-A10GT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTC2TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N-G5TC4TC18-N7-N8ATGC40TC15AT20CT4-N2AG1GA16-N9-N18-N19-N-N-T1TN6-N12-N14-C-C2-NTNGN5TC1-N6AN14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N2TC5TGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N16-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G7TA2-N-N-N-N-N-N-NAN12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N48CTACAG43CA1GACT28AG5GA5TC11CT17GA2GA17AG2GA2AG5GA2CAGT1TC25AG4CT3TA1CA33AG7GA1GA11AG11GC18-N-N-N2GC14GA14CA12AC1TC1AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N32GC5AG15CG2CA35AG7TG11-C-N-NTN8AG12AT37TC87TG1AG11GT9GA4GA9CA1AGCA4GA34AC9GA7CG10-N-N-N-N-N-N-N-N-NCA11GA16CT15CA1TC29CT5CTGATC17AG60TC5GA11TG30-N-N-N5GA29GA8AG8AG6TC41AG7AG27-N-N-N-N-N-N-N-N-N6GA5CT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4GC27AG12-N-N-NCACT1AG13CT11GA5TC1TCTA2TC1AG23GA49-N-N-N-N-N-N-N-N-N20-N7GA11CTGA3-N-N-N-N-N-N-N-N-N-N-N-N3GA14CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN6GA9TC1-N-N-N-N-N-N6AG1CA21-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG40AG26CT20TA13AG11AG6GA95GA50AG5CT32AG40GA43AGCT15AG14AG5CT36AG16GA5TCGA3AC54TC29TC2TA69AG1GA26AC8CT1CT27CT14GT53TC2GA35TC20AG8GA27GA13AG14AG4AG7TC67CT24TG28TC23AG8CT23AG2CT11GACT16GA23GAGA12CA30GA50TC12CA51AT21GA14AG3AG14AG32GA1TC27-N-N-N15TC1AG24GA9TC30AG11CT21CT13GA2AG14GA11TC23TC5AG30GA1CT1AG19CA7GT24CT11CT19AG66AC1GA11AGCT6GA24GA14CT53GA57-N-N-N2AT44CT15AG8-N-N-N2GA14TC5CT6-N-N-N3TC40TA11GA15CT2AG8AG61GA8AG11CT5CT2GA38AT21AG2AGAC1GATC5AG3TC17GA5AG11CA25AG4AG55AT36GA56AG28CT18-N-N-N45GA28TC77TC2CT57-N-N15GA14TC6CT2AG1AT3AG9AG1AGAGTA5GT21ACTC43-N-N-N-N-N-N8AG25TA52GA3GA9AC17CA29TC5TC11GC14TG13GATCGA7TC30CN-N-N-A16GA12AG20-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT23GC50AG9TC9GN2-A7AG11AG5AG1GA27AT3-N-N-N2TC5AC2GA2AG2GA14AT21-N-N-N41TC2-T-N-N12AG21AG3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TG15GA6TG8-N-N6CA35GA17TC14CT28AC5GC37-N-N-N-N-N-N12TCCA3AGGAGA4GC12TC7CT23-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC2GA4TA2GCAC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT13CT11GA2CA22TC6CA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N15AT2GA1GT6AC3GT15TC5AC-N-N14GA1ANTNCNANGNGNANGNGN2TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT8TA11-N-N-N-N-N-N2AG17CT5GA2CA-N-N-N-N-N-N17CT20AG15TC19CT64GA19AGAT15GT5TC12AG20CG23GC10AG31CG6TG6AG2
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,3103,6609,9390,7331,10418,0.0,2323,77.345,2400,plus,2GA5CG1-G1CA2AG3AG21GA3AGTC4AGAC3GA8AGAT10CTGA4CT17GA2GA11GA6GC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNANGNGNANCNTNANANTNANCNCN7GA5TC12TC14AG9-N-N-N62GA3GAGAATGA4AGGAAC17TC5GC15-A-N-NCN17CT21TC7GA19GA4-N-N-N10AG5ATAC3AT5AG6TC21AG2TCGAAC1AT5TGCA18TC1GA14GA3CA2AC1AG3-C-C-A-G-A-GGA14CA3TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N3GA5ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN2GAAC7GT4TA1CA1GT1AG2AGGAAG2GA1CA4GA1GA9CA1ACGA8AGAC6CAAGCAAG1GA6-G-G-A-A-A-TCA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGAGA1CA5GACTAC3GA22TA6AGCT2TC5CG30CT2CTAT2TA2GCCAGATC6GACTGA1GT2CT3-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNGNTN1CG1GA6CG2AC2CATAAGCGTG1GCGAGAGA3TC1TC2CA2-G-A-A2AG3ACTA5AC4AC16TA5-N-N-N4GTAG6GA34AT3GC8-N-N-N43G-C-A-2ANANCNANCNANANCNANANANTNGNGNTNGNGNCNGNANGN2T-G-G-G-A-C-C-C-A-G-A-T-1GA2GA1GC4TA1AT2CG22GA32CT23GA9AG19AG3-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20-G-N-N-N-N-NANAGCG1TA1CA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N50GC8AG18-N-N-N-N-N-N-N-N-N1TA21AG12CT7AG17AG32AG5TC34GA15AG39AG26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AT8AC1AG6GAGAGTAC3TC18GC9GA7TC3GAAG7TC2AT11CG7GA5AG32GA12GA1CT15GA10CT18AT22TC2AG26GA11AG20CT11AG2CT7GA7GA2-N-N-N-N-N-NTC8-N-N-N19CTCA2CA33GAGTATTCCG14TC3AG5CT6AGTA3CT8TC4TG14TA26CT1GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GA26GA38TC5TC5TC1TC3TC3TG7GT5AG9AG9CT1AG5AG2AGTC12CTTCTGAC10CG3GA14AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N13GT9-G-T-A-G-T-G2-N-N-N1GTGT6GCTC1GA12AG6-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNGNANANCNTNANANGNCNCNANGCAG2AC13AG2GA7GA15TC4GA3TC4CA3CA18TC6TC7AC2TGAT2TC20AG6-N-N-N-N-N-N-N-N-N-N-N-N5CT10GC6AG28GC4CG7CT42TC9AG3GA-N-N-N21GA1TCCT16TCCT9GA25AG10CA3-N-N-N-N-N-N2TC13TA25CA2GA11-N-N-N3GACA11AC4-N-N-N12AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,735,9075,9709,5,739,2.48e-153,541,79.184,582,plus,14TC3-N-N-N5ACAG3GA21GA1TCCT16TCCT4-N5GA12-N-N14-N-N10CA5TC13TA7-N17TGCA2GT7GA1-N-N-N4TCGACA11AC16AG12-N1GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA28-N2TC1AT1AN-N3-A10GT4TN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N-G5TC4TC18-N7-N8ATGC40TC15AT20CT4-N2AG1GA16-N9-N18-N19-N-N2-N6-N12-N14TCTC1GT-N-N-N5TC1-N6AN14
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,280,386,634,10651,10929,2.59e-58,225,84.643,237,plus,10-N2-N6-N6-N9-N-N-NATGC10-N14-N10-N6TC14-N1AT5-N-N14-N-N-N-N-N1CT6AG1GA1-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N15TCTC1GT5TC11A-9
-OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,11027,280,9460,9708,10651,10929,2.59e-58,225,84.643,237,plus,10-N2-N6-N6-N9-N-N-NATGC10-N14-N10-N6TC14-N1AT5-N-N14-N-N-N-N-N1CT6AG1GA1-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N15TCTC1GT5TC11A-9
-OQ092464,Ref.B.NL.00.671_00T36.AY423387,0,9556,11027,9866,484,9400,569,10422,0.0,9226,83.742,8262,plus,22AG2-N21-N9-N16CT1-N19-N-N-T1TNGA5-N12-N14TC2-T-N-NCN7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N14-G-A-A-G-A-A9AG17-N-N-N-N5-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G-T-A-C-G-C-C-T-A-A-A-A-A-N-N-N-N-N-N-N-T10-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N24GA34GA29AG33GA11GA20GT5AG6AG17TC3AG9GA40AT31CGAC2AG3CA2TG26TA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG7CA4GA2AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1CT6AG20CTAC1TC2GA71TC6-N-N-N26GACT67TC17AG50AC93-N-N-N-N-N-N-N-N-N29CA5AG35GA31GA36CT15CT7CT2AG3TGGCTCAT7GA23AC2AG3-N-N-N9GT1AG11CT2GA17AG32AC14GA2AG5TC11AG11AT2AG9-N-N-N-N-N-N-N-N-N10CG1CG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGCGC1AG23TCTAAT2GA1GA8AG1-N-N-N17CT17TC5TC1AG12TC5GN4GA17GN3AGGN22CT3-N-N-N-N-N-N-N-N-NGN12AN6-N9CT14-N-N-N-N-N-N-N-N-N-N-N-N48-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N24-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N5AG9GA1TC6AG3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20GA14AG6CA1CA23AG20TC29CA3AGCA3AG75GA7CTTA11GA58AG6AC4TC17CT59TC47CT9AC13GA32TC9GA25TC41GA41TC2CT2AG35TC73TC33CT71TC74AG16AG6GA3TC11CT4GA12AGCA30TC17AT53GA3ACGNTC3AN32TN22CT16AG27CT2GA12GA2AG11AGGC18GA5GA5GA2AG55TC18GA59AG7GA1AG4AG11TA15CT23AG1CT27-N-N-N8GA4GA1CT12GA13AG91GA2AG20GA17TG8CT5GA5AG24AG7AG12GA2TC2CA3CATG50GA5GA3TC64AG17TC1AG12AG17CA5AC14AG47CT3GA47-N-N-N2CA2TA41CT24-N-N-N17CT3GA7-T-N-NCN3TC7GA44AG14CT12GA61GA8GA50AC18GCGC16AG16CT110TG14TC25ATCT34GA3CT11GA6GA43AG3-N-N-N9CA37CT83GA17GA63-N-N6GA21CT12TGTG3AG10GAGAGA4GT6AGGA11CA14AG14TA8GA8TG-N-N-N-N-N-N2GT5GA78AG1GA1AG8GC17GA1TC20CG7CT46AG1AT7TC5CG5TA18-N-N-N8AG25CT16-N-N-N-N-N-N-N-N-N-N-N-N28AG32AG20GA13AC2-N14TC7GA7AG15CT9CGCG4-N-N-N5CTAG7GA17AT5AG15-N-N-N9AC35-N-N-N11GA4GA18CT1TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG3GAAG6CT3AG15TN-N-C6TC33GA11CA1TACA3TC8GACA30TC2CG43-N-N-N-N-N-N9GA6CAAG19CTTA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT5-A2CN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT25AGTC22TA7AG30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT3AT38-N-N5GA5GA8AG14AT13-N-N-N-N-N-N-N-N-N-N-N-N5TCGA11-N-N-N-N-N-N1TC3AG23AT-N-N-N-N-N-N47TC8AC29TA23TC26CT12GC7GA1GA12GA8CT12GA25TC18CG4TC5GA8AG26GA9AG2TGACTC4ATCT2CTANANTNANANTNANCNCNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT5GA3CTCT3AG2AT3CA2CA2GA3CTGAGA-T-T-T4AC5A-A-1GC2G-4GA4AGAT25GC5GA1GA5GATGGA4AG5AT6CG2TGTAAG5CT26AG1ATCA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GT8GA6CT27-N-N-N12GC1GA21GA4AG20GA5CT11CT8AG3TC6CA16-N-N-N26AG8TC3CT31GT-N-N-N15GA8TA8GA1TC17TG5TG16CA5TC32CA4-N-N-N-N-N-N27-N-N-N-N-N-N-N-N-N-N-N-N4CACA15-N-N-N-N-N-N-N-N-N-N-N-N17ACAC3AG2AG1AG1GA9AG8GA8TG2AGAG3GA9CTAT2TA1GAGA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2GA6AG6CA1CTACCA14CT6GA6CT5AG10GA29AC1AG18AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G3AT2CA1A-1TC2TC3AG1G-G-3AGAT1GCGTTA2AG1TAGCACCA3GAAGCT5CA20GA9-N-N-N3CATGGA39AGGC4TC1CA4AGAC-N-N-N11TC15AT7AG8GTAGAGATANANCN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T4GA3CT1CG8CT3CT15AG7GA47AG5AG3AG23-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3GA52AGAG20-N-N-N-N-N-N-N-N-N1TA34CT32TC22CT27GA1GA12AC16GA23AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT11TG15GC1AG5AG23CT12TC8AG1AC5AG2CA31AC3AG4AC25GAAG9GT41CT2GA5TG15GACT14CT13CA16AG2GA2TC17CT-N-N-N-N-N-N9-N-N-N11AC39AG7AG11CT9AG4TC69AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12CGTC9TC17GA7GT11AG1AGAG7AG4CT3CT9CT3CT11TC15AG8GATC1TA11GTGTGT5TCTA40GAGACT1-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9TA11GAACGA2GATG1TG1-N-N-N1TG12TGAG1AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT7AC1-N-N-N-N-N-N4CT21TG5GA-N-N-N-N-N-N-N-N-N-N-N-N17GA39GT1AG45AG2CT14-N-N-N54CG1GT26GA9-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GA9TC5GA24CA1GA15
-OQ092464,Ref.B.NL.00.671_00T36.AY423387,0,9556,11027,335,6,325,10088,10422,3.64e-99,361,88.657,297,plus,11AG2CT14-N-N-N54CG1GT26GA9-N-N-N-N-N-N1CT33GT5TCAC8GA5-N-N-N18AT1CT-N-N-N19TAGA8GA8AG11GA5AG4GA9TC5GA24CA1GA15
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,7220,61,6658,5,7217,0.0,7152,85.748,6191,plus,14TC3-N-N-N3CA1ACAG9AT15GA25-N5GA9TC2-N-N14-N-NCTTC9TC1AG16TA7-N17-G-A-A-G-T-T-A-G-A-A-G-ATA1-N-N-N-C-C-A-A-C-A10TC1GC1TA5CT7GTAG3AG2AT5-N1GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT22-N4AT1-N-N2AG11CT1AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N7AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GTCT3-N-N-N6TC5AC17-N7-N9GC15CT6CT19AG1CT1GA35-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N1AG6TGAGGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6AG2-N-N-N13-N-N17-N-N-N-N-N-N16-G-C-G-A-G-G-G-G-N-N-N-N-C-G-G-C-G-A-N-N-C-T-G-N-N-N-N-N-G-T-G-A-G10-N-N-N-N-N-N-N-NTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49ACAG27AG5AG3CA4CT12CA49TGCT4GA11GC30GT1TC21TC48AG7GA25GC2AG15-N-N-N3CA17G-4-ATA18AC4AC1GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA23CG1TCTA35AG20-N-N-N8AG12AT53AG1AG2TG38TC27TG13GT9GA13AG43AC28-N-N-N-N-N-N-N-N-NCA25TA2CT17TC5GA30GATC3TC8TC4AG54GA14ATAT7AG5GA17TC3CT2-N-N-N11AG2TC29AG8AG38GA2GA5AC5CT2AG27-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-C-T2TCGA28TC9-N-N-N1CTAT32TC1TC3AC20AG26AG5GA21-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA25AG3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N11GA18-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA9AGAG34AG11GA50TA4AG3AG7AG21AG45GA91CT2TC20TC8AG101AG14AG50TC14TC17GA65GA5TC35AG14CA9AG11AG16CT22CT92GAGA2AC5AG59GA20AG23AG19AG100AGAT15TC20CA14AG26TCGC4AG32GA5TC18GA12CA30GA17GA24AT1GA6CT11CA17AG1TC26AG26GA35GA30GA3TC25-N-N-N2CT12TC1AG2TC8AG26CG26TG11CT17AG20AG26TC23TC2AG2AG4GA2CT3CA18GA16GA6CA7AT11CT44AG20GA18CT26AC1GA19GA24GA14CT63TG13GAAG20AGCA10-N-N-N5TA7GA3CT5CT39AG2AG5-N-N-N30-N-N-N19CT18CT29GA15AG61GA8AG11CT5CT6CT22GA3GA7AT2TC18AG5GA6AG21GA17TA29CAAG40AG8GT99AG40GA6-N-N-N2CT42GA1CT26TC68GA14AG54-N-N15CA20AGCT4CT3AGAG8AG7GT10CT12AC1CT26TC5GA8AT-N-N-N-N-N-N8AG6GA40CT30GA6AG5TG18CA24CT4TC5TC11GC14TG3AT2GT6GATCTA11CAAG13AG11-N-N-N17GA13TC12GA6-N-N-N-N-N-N-N-N-N-N-N-N4GT23GC4TC39AG15TC1TC5GA1-N22AG7GA27AT3-N-N-N6AGAG6AG3TC1CT7CA19AG5-N-N-N8TCTA31TC2-T-N-N12AG4AG16AG5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17GA15-N-N42GA3CG46CT10AC43-N-N-N-N-N-N9CG3CA3AG6GC13ATGT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC6CTTA2GCTC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT7GATA1AC27-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5GA5TC2CGAT5AG5AC3GT22-N-N16ANTNCNANGNGNANANGN2TA1GA2GA18C-A-C-C-A-T-5AG21AG-N-N-N-N-N-N22AC4CA2-N-N-N-N-N-N14TC23AG15TC14AG16CTCA7GA41TC15CGCT5AT21TC12AG25CT24TC36TG6TG6AG2GT4
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,3128,6663,9403,7303,10420,0.0,2413,78.261,2448,plus,4CA2AC5AG6T-AC1TG3GA1ATCG1-TGA6GATA6AG23TCGACG6AC4AG1AGAG4AG1AGAC14CT5AT3GA7GA2GA10GTGA6AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN7TA5TC2AG6TC10CT16-N-N-N6AT7AG41AT12GA4AG1AC23ACCA15-N-N-N19AG9GA23TC18-N-N-NAG5GA9ATAC9AG31TC1AC1AT2AG15TC12TC14TA2-C-C-G-T3-C-ATGTATG1AG4GA3CAAG4AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N1AG1GA1CA3ANTNAN8-G-N-N-N-N-N-N-N-N-N-N-NAN23GT3AGAC1GA1CA3GA4ACGA5GA5GA3TC1GACGAC18-G-G-A2GT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9GA7TG14AG16TC3TC13CG21CTAT5AC1GA18A-A-T-GT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AGCT3CT3AG2-C-T-G-A-A-G-G-G-T-C-A-A3CATC5-A-G-GTA1AG1AGGA3CA5TC5GA21-N-N-N4GTAG6GA22TC10AGAT2GA7AG1-N-N-N21TC1AGTC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTNCNCNGACAGT2-CGA4CT1CACGCT1TC8TC26TC44GA11GA21-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2AG4GA12-G-N-N-N-N-NANAGCGGACA1GA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT46GC26-A-N-N-N-N-N-N-N-NGN36CT29AC44GA20TC2CA16AG44AG9AG11-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TC5AC10ATAC3TC18GC1AG21GCATCT4TC2AT43GA14GA5GA24GA10CT18AT7CA14TCAT1AG5GT15AG4GA41GA2AG2CT7GA1TC5GA1TC-N-N-N-N-N-N9-N-N-N2AC16CT37GAGTGT1AG14TC3TG2GA14CT4AG23GA28GA24AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GA26GA5CT20GT11TC5TC11TC45AG2AGTC1GT12TG6CA23AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N22TA5CG2GN-N-N-A11GA2AG17-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9C-C-A-G-C-T-11ATGA23TC17CA6CG3TC13ACTC20GA17AG3-N-N-N-N-N-N-N-N-N-N-N-N5GT10GC33AG1GC4AG1GA6GA41TC6CA2AG4-N-N-N5AT15GA30GA9TC15AGCTTC9TC1AG-N-N-N-N-N-N16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-N-N-N-A-A-T-A10TC1GC1TA1TC-N-N-N3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,735,9104,9719,5,739,5.52e-137,486,76.735,564,plus,14TC3-N-N-N3CA1ACAG9AT15GA25-N5GA9TC2-N-N14-N-NCTTC9TC1AG16TA7-N17-G-A-A-G-T-T-A-G-A-A-G-ATA1-N-N-N-C-C-A-A-C-A10TC1GC1TA1TC3CT7GTAG3AG2AT5-N1GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT22-N4AT1-N-N2AG11CT1AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-C2TG9-N7AG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N7GTCT3-N-N-N6TC5AC17-N7-N9GC15CT6CT19AG1CT1GA35-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N14
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,335,59,360,10086,10420,2.37e-73,275,80.000,268,plus,16TC6CA2AG4-N-N-N5AT15GA30GA9TC15AGCTTC9TC1-G-N-N-N-N-NAN16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-N-N-N-A-A-T-A10TC1GC1TA2-N-N-N3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,285,423,675,10645,10929,6.82e-64,243,86.316,246,plus,5-NAC9-N2-N6-N6-N9-N-N-N1GC10-N5CT6CT1-N10-N8AG1CT1GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,11027,285,9466,9718,10645,10929,6.82e-64,243,86.316,246,plus,5-NAC9-N2-N6-N6-N9-N-N-N1GC10-N5CT6CT1-N10-N8AG1CT1GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,1751,1,1746,455,2202,0.0,2186,93.946,1645,plus,254-A7GA1AG35GA4T-T-68GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG16TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA12CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG20AG44CT17TC47TC27TG99CG36GA23AG2GA30GATC36TC32CT11AG5CTAT7AG35GA20AG17AG8AG2CT26CT8GA9AG7AG30AG1GA14ACGA12AG24AG1CT9CT25TC24AG25GA9TC11CT24GT7AG12CT13GA8CT7AG26CA14TC5AT7CA5
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,301,550,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,9386,9635,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,180,1,180,9540,9719,2.04e-69,259,100.000,180,plus,180
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,9497,1,9493,151,9632,0.0,13151,98.473,9352,plus,13TG3GT7GA5TC56TG51GA129GC68TC84AG159AC359GC71CT3AG41GA79AG256YCWAYC2WA103AG146WA2AG38GA142TC72GT141TC52AG298TC8AG101AG125AG539AG65GA7GA4TC55GA2AG131GA13CT66TC25GA9AG38AG38CT11TC53TC50GA11CT1AG12GA6CA8AG263AG349AT21AG12AG313GA254ACAC26TC108GA105TC119AG229-T41AG5AG81CA45GA54CG3CA3AGGA18TC32TC11AC2-T-A-G49AG41GA69GA1GA51AG114GA215GAGA5CA3T-A-A-T-A-C-C-A-A-T-A-G-T-A-G-22GAAG6GA54AGAG24CT18GA30CA231TG16CT9AG33CAAC48TA99GACA225AC21TA17GA34CT61AG8GA207GC122AG68CT81AC3TC290AC4GA85AG143AG14GA38TC52AG146GA285GA25AG11TC47GA58AG11TG181GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,547,8947,9493,1,547,0.0,752,97.989,536,plus,23AC57GA37TC43TG3GT7GA5TC56TG51GA129GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,484,1,484,9236,9719,0.0,676,98.760,478,plus,17GA58AG11TG181GC68TC84AG59
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,4082,1,4082,1,4082,0.0,5487,97.036,3961,plus,14TCGAGC5GAACAG56GA21GA4CT5TA23TA18TG9GT7GA5TCGACA11AC16AG1AG11GA5GT10AG10AGTA5AG56AT6TC7TA7ATTG77GC79GA48TC103TC12AG148TC1CG12CTACAG44GA154AG27AG7GA25GC3GA31GA27AC3AG2GACT125AG138TG4CT41GA92CT18AC22GA8TC59TC107GA17CG6TC31GA17AG14GT46AG20AG2GA2AT35TC29GA88CT22CT49TC5AT16GC41GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG105AG11AG12GA52CT128CT21TA31AG12CT86
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,634,1,634,9086,9719,0.0,813,94.795,601,plus,14TCGAGC5GA1AG56GA21GA3AGCT5TA23TA18TG5GT3GA14GACA11AC16AG1AG17GT10AG10AGTA5AG28AG27AT6TC7TA7ATTG77GC79GA48TC84
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,403,494,2.15e-30,131,98.913,91,plus,18GC73
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,9488,9579,2.15e-30,131,98.913,91,plus,18GC73
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,8446,666,9069,1323,9673,0.0,9611,90.161,7615,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108CA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG35GA5AG2TC11AG17AG8AG38GA2GA14AG31CT4GAGA1AT4CT1AC4CA35CACT6AG28TC5AG44GA18GA5CT29AG11TCCT19C-T-2C-C-T-C-A-G-A-G-C-C-G-A-C-C-A-G-A-A-A-3CT28C-C-A-G-C-C-C-C-T-19TC5AT2-A-G-A11TC14AC1AG2GA8GA5T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA14GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG8AT2CA27AG22AG6AG55TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA34CA31GA28TC38CT35AG91TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC16AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT67AG5GT13GA26AT1AC53AG6TC28AG10GAAT17CT5AGCACTAT5AC2AT1AG1CT4AG3TC29AG35AC10TC2-T17AGCA15AG2GATC2TGGA2AG2AG26AC38GAGA3CG46GT5TC3CAAC43AC8TG3CA3AGGA18TC1CT5CT14AG9TC4TC2TA2GCACGA3TG26GACT22AT8GAGT39TC1AGAGAT5AG5AC3GT30CT5G-G-A-T-C-A-G-G-A-4TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC33GA1GA5TA37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG9G-T-A-G-G-2ATTA1AC2CT1AGATTACG1CAAG1TG1AG1-G1CA1AG2A-C-3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3AC2TC4CAAG4TC2AG3CT2TC33AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA35AG8GA11AG11TC2CT9AG5AG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39TA2ACAC2GA1-C-C2-A-G-A-G-G-A-C11AT2TGAT1GA3CT3GACA1G-A-T-7GA4AG20CT3G-3-G2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA19TG5AC12ACTCGA7AT42CTAT6GA19ATGT1GATA2AG1-A-C-T-T3-G-T3-G-A2-G-G-T2TA1-T3-A-C-T-G-A-A4CG1AG1AC1ACTA5AC5GA25GT7GA28TC8GAACTA6GA2CT17AG2AGAC21C-A-A-3AGTC1G-T-3G-1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA32AG1AG3GAC-G-T-8AT7CT38GC3CA16AG29AG12CT29AC28AG15GA5TG17CA56AG14AG10CT9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA21AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG12GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT5AT4AG21GA2TA2AG2GACT28G-A-A-2A-A-T-T-G-A-T-C-C-A-A-G-G-C-C-T-G-C-T-G-C-A-A-G-G-A-G-G-G-A-2AG17CA1GA4AG18TC8TC26TG2AG4TC41AG2AG2CT10GC33AG6TG1GA48TCGAGC5GA11AT9TC5GA1TC14AC13GA3AG14AG13TA23TA18TG5CTCA1AGGA4GAAG8GA12AC1TA5CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,627,46,669,1326,700,0.0,792,94.258,591,minus,33TC20TC68TG1GT16AT7AG3GATC3GACTCTTG4TG15CT11CT31CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT53AT1-T-T-T55
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,588,8482,9069,1,588,0.0,673,89.966,529,plus,14TCGAGC5GAAC10AT9TC5GA1TC14AC13GA3AG14AG6GA6TA23TA18TG5CGCA1AGGT4GAAG1GA5TCGA12AC1TA5CT8AG13GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,8140,882,8985,1584,9666,0.0,9469,91.032,7410,plus,6TC32TC59TC77GA5AG17CT17TA5AG29CT8GA32GT23CT6TA2GA1GA10AG14GA12GT34TC29GA60AT14AG12CT7GA11CT4CT3AG6AC4AG17GA11TG1TC5ATGAAG13TCTC23CA7AG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA17AG41CT13AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG57AG7TC32GA11TC56CT69CT45CT39AG95AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA2GA9GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA31CT10GA3AG5TA5AG12TA13AG38CT38AG12AG10GA2TC23TC2AG2AG2AT4CT18CT3GA1CT18AG2TA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG11GA5AG35CT6AC1AG30TA71TC26AG61GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29CA18CG7AGCA22GT99AG92GA13GA14TC23GA32AG17AG2TC34GA31CA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTA-G-6CT1AG3GA1GA14AT35AG25GA27CA29TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC14GA2GA12AGTC10CA9GA2AT21GT1GC24ACGA9GA17AG6TC19AG8AG8AG1GAAT11GA2CT9GACT6TC6CT4AG23AG23TCCA23GC7TC2-T12AG4AGGA2CT5GA6AG2CATC1ACCGCA2TG2AG33GA20GA10GAGA5GT2CT4GA23AT8CAGACGGTAT2CT3TA9GC46AG3CA4GA1TC2CT1GA2ACCT7TC4TC27TC4TC2TA2GCAC4TG26TA1TA14CT2TG5TC6CA20ATGT8AGGA1GA10AT2CA8AC3GT36G-G-A-C-C-A-4GAAT2T-G-G-4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-4TG5CG20CTAG4CT5AG2-C-T-A4GAGA1CA1CT36AG6GA28CT11CT11CT5CT14TC34AT2-T-G-G7AG14TCGACTAG9AG10TA76CG6CG6AG1CTAT1CG2TG1GACT-G-A-T7TCAC2CT1AG2CGCT1-G-C-G-G-G-A-G-A-A-T-G3GA1AGTG5-G4AG2GA1CA12TC3GA3CG4GATG8AG9AG3CG8CT17GA2GA3AC3TAAG1GTGA6AC12T-A-C-C-A-G-C-T-A-T-A-G-5TC2AG7TA5AGCT81GA5GTGA6ACTG16TC5AC6TC51TC24GA3TG15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC10GA3TA2AC1AG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA4AG39GA1GC9AC8GAAGTC8GA9-G-G3ATGA1GT1GA-A6GA7CG23GA7TC16AG23AT26ATAT2GA2CG3AT-T6ACA-2GAT-A-C-3AGGT10AT4TG2AG1-G-A-C1TCTA5AC10AGGA4GAGA6GA14GA46TA23AG3CT2CATC21T-G-A-2CAGT2T-A-A-C-A-C-1AT1TC2AG69CA36GA46CT46AC5AG14AG8TA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC16ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGTAT4TC2ATAC10CG46GA30GA10GT18AT4TC20AGAG20AG37CT22TA7GA2GC28CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG9TC7AG25GA5GAGT39GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT10AG5AT4TAAG1TGCG6CA3AG2GT1GAGT3GA6GA1ATAG23CG14GA4AG25GA9TACA9AG7TG6AC8AC12GA7A-G-G-6GA3AG2AG8CT7GC27AT7GC49TC5TC8CAAG25GA5AC7GA16GA25AG1AC28TA13AG1GT2AG5GTGA1TGGA5AG6CA1GA8GA3AC2TG17AG2AT12CT3TC1AG16TA5AG21CT1GA16AC1AG13AT15GT7TG19AG11G-10AGAC11AT22GC56AT22GA48AC31
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,846,40,881,1539,694,0.0,1076,94.563,800,minus,15CT14GA2GA23CT26CA22AC30AG2TC17AG38CT29GT17TC11AG23CT53CG35GA5AG1TG5GT20TCCT20TC69AGCT13AT8TC7CT17TG1CA75CT2TC29CT6CT31CT6TCTGGA23CT47AT-T-T-T-T12GATG21TC25
+MN090376,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,8985,9719,582,8404,8985,1,581,0.0,693,91.753,534,plus,8TC5TC9AG25GA5AC7GA16GA27AC28TA13AG1GT2AG6GA1TGGT5AG1GA4CATCGA8GA3AC2TG17AG2AT6GA5CT3TC1AG16TA5AG21CT1GA4GA11AC1AG13AT15GT7TG19AG11G-10AGAC11AT22GC56AT22GA48AC31
+MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,9719,9070,477,9480,577,9627,0.0,10903,92.381,8379,plus,25AG1-C-C-C-T-T-T-T-A-G-T-C-A-G-T-G-T1AGTA23C-5TG2T-A-GCAT11TGAG20GA29AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT89
+MK115581.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9495,9719,544,8946,9480,1,542,1.17e-179,628,90.809,494,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AG13GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT89
+MK115690.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9084,652,9689,652,9670,0.0,10957,92.459,8399,plus,15AG51AG25-T-G-A-G-T-A-C-G-C-C-A-A2TA71CTACAGGA17GA25GA6GA5CA38CT39AC17GT34GA29AG15GA25GC3GA51GA1GA5AC6GA4A-C-C-A-G-C-AGCT21AG8TC89AG11CT6CT119TG10AG35GA62TA83CT11AG23GA20TC71AG47TA5AG11GA26GA11TC5AG11AG2GT16CT13GA40AG1GT12TC5CT8TA7TC3AC1AG18AG1GA49CA1AT26AG12CT7GA22AG27GA13TC5ATGA15TC14ACAC7CA4CA12GA9AGAG35GA61CA77AG122TC8AG95CT5AG29AT8GA68CT11AT101CA20CTAG59GA82AG4AT16AG10AC36CT21TC9AG2AG19AG7TC52GT17CT2GA19CT15AC35AG8CT14CT8AG26AC5GA3GA32AG17TC1AG11GA76AG9GA95GA21GA16GA25GA3AG11AG12GA13AG38CT17AG47TC29AG7CT43AG2CA37TA20AG20TC17GA33AC21GA123GA29AT2CA59GA170CT11GA12GA7CT3AC17CA11GACA12AT21AG7AG4AG9CT8AG2GA17CA44CT2TA5GA71TC60GA14TA14CT26CA29GA73AC32TC68GC4CA1CA20AG3AG16AG6GT6AG14AG1AC20AG5TC16AT6CT3CT1GA43CT36GAAG22AG1CA35TC11AC14TG1TC1AT10TC1GT49TC4GA12AG8GA15CT19AG39GAAG12CA6AG3TC11GA27GA27GT23CT8GA18AG14TA9GT18CT2TC2-T33ACAG6CG10AG25AGTA26CT8GA13CA13CA9AT24CA4GC36AG6GA2TG3CA3AGGA9TC41TC4TC2TA2GC5TG26GACTCA21AT8TA31GA24AC3GT15TC20G-G-A-T-C-A-T-G-A-4TA11AG-T-G-G-A-G-A-T-G-G-G-G-G13TC51TC29AG7AC12CT34CT33TC21AG3GT5AT34AG87CG4CA1TG6AG1GT3GA3TA1AG3G-C-A-4GT1A-G-A-1TC5C-A-C-2AG2AGTC2TG1CGTA1ATCG2C-4C-C-A-C-T-2T-2TA1G-T-T-G-G-2GA2AG2GA19CT2CGTCGA12AG6AG4GA5TA3GACT20GA17GAAC2TC2AG5GA3AG1TC19CA79GA4GAATGA4AG1ACTG16AC5AC15GA47CA34AG5ATAC3AT4AG6AG7TC17TCGA9CA4GATA33TA2AC1CG3-C-C-A-G-A-G3GA11GA3TGAT1GA2GACT4GA1T-A-T-7GA1CT2AG4GA6CT4TA1CA3AGCT1AG1AG3CA4GA7ATAT2GA5GA6AGAC19-G-A-A1GT5GA6GA6GATGGC7GA18AGCT2TC1ACTATC39GATC22CTAT5AG1GAGCGTAT1TG6AGCA8GA2GA2GC6CA1AG1-G-A-C-A-C-A5AC10AG28GA34AT4CA6CA2CTGTACGA15TC5CT16GT3GAAG1G-C-T-3G-G-G-2CTAG1CGAT6CT19AG17CA15GA3CT40GA4CA13AG23TACA1CA5CT47GC5AG87AC28AG15GA44CA25CT4AC19AG13CT11TAGC1TG6CA2AC3TC18AC9GA12AG1AT5TC2ATGC9GA1CA8CA28CT1AG8CT12CT15GA4TA4CT11CT6AT47AG2AG26AC7CT30GA3AC26CTCA1GA3CA12CAAG17CT2AGCA6GA1TC4TC3AG3AC9TA3CT7AG13CATG32CT1GA49CT8CT2TC2GA11GT1GA30TC38AG10GT1TG1GA1GACAAG6TG10ACTG36AGGACT5AT4AG8TC2AG9TA5AG1AGGA28AG8AT14ATGA12TC18GA24-A-C-A-G-C-A4AC8AC4AG7GA5CA1A-A-A-4AG11AG2CT10GCGA11CT26CTTG44AC5TC9AG12TC12GA5AC24GA25AGCTTC4TA23TA24GT1GA1GA9ACGC6AG8CAGC1TA14AG6AT18AG4AG7CT2CG25CA5CT5AG3AC21ATTC5C-T-A-G-A-A-C-T-G-C-T-G-A-C-A-T-14TC2TG31G-6TC16AT21CTGC21CT22GT34GA84
+MK115690.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,602,9088,9689,1,585,0.0,679,89.701,540,plus,8AC5TC8ACAG12TC12GA5AC24GA26CTTC4TA23TA26GA1GT7GA1ACGC2TC3AG8CAGC1TA14AG6AT6GA11AG4AG7CT2CG25CA5CT3GA1AG3AC21ATTC5C-T-A-G-A-A-C-T-G-C-T-G-A-C-A-T-14TC2TG31G-6TC16AT21CTGC21CT22GT34GA84
+MK115571.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9394,9719,9061,410,9377,577,9625,0.0,10733,91.855,8323,plus,25-G-A-C-C-C-T-T-T-T-A-G-T-C-A-G3-G-G-A28AGCATC1GT1GA1CATG1-G-A-A-ATG2TA3TC1-G-A-G3AC2CT3-G1TC1TC1-G-G1AC2-GTG2AT2-T-G1GATGGC4CA2-G-C2CG3-CAGCACGTG1AGACAG4-C-T-G-G-TAG4-C-G-C-C3CACA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC6AG12TC1TA2AG6TC1CA52AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG2AG14AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC1GT6TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT8CT37AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC7AG4AG17CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT19AG6AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT32TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC1TC4TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-A-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC10AC13GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA7GA6AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115571.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9394,9719,542,8845,9377,1,540,2.31e-175,613,90.037,488,plus,14TC8ACAG18CT6GA5AC10AC13GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA7GA6AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115514.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9382,9719,9072,369,9381,577,9624,0.0,10860,92.262,8370,plus,25A-C-TG1ACACTCCT1CT3-T4G-1CT1C-C-C-2A-C-T-28A-G-3T-4TA8TGAG20GA29AG23-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4TG1TA-T-G-A15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T12GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1A-A-16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT81CT4
+MK115514.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9382,9719,541,8850,9381,1,539,8.58e-176,615,90.203,488,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT81CT4
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,9152,512,9583,577,9686,0.0,10851,91.882,8409,plus,24-A-G-A-C-C2-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27-G-G2T-3GATA1AG1TG1GA2A-T-C-C-C-T-C-T-2TA3TC4A-TGCACG3AT1CT1CG1A-A-T-29AG23-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG33CT31CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA4AG2CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT8GC1TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT4TG1TA-T-G-A15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T12GA7TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG11AG2AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5C-2TA1A-A-16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC25A-T-C-T-C-T-A-G-C-A-G-1G-G-G-C-G-C-25
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,668,8973,9614,1,649,0.0,688,86.976,581,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC25A-T-C-T-C-T-A-G-C-A-G-1G-G-G-C-G-C-25-G-A4-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,79,273,351,577,649,8.05e-10,64.0,78.481,62,plus,28TC2GTGT2AGCTTC2AT1A-T-C-C-C-T-CTCGCGTA27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,81,405,485,577,649,5.83e-09,61.1,76.543,62,plus,28TC2GTGT2AGCTTC2AT1A-T-C-C-C-T-C-A-CTCGCGCA27
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,31,273,303,9662,9692,8.42e-04,44.0,96.774,30,plus,28TC2
+MK115488.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9623,9719,31,405,435,9662,9692,8.42e-04,44.0,96.774,30,plus,28TC2
+MK115030.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9126,9719,9112,34,9126,646,9679,0.0,10568,90.935,8286,plus,21AG41-A23CG21GA3TA59CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA18GT50GATC12AG12AG1TGGA20CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG38AG7AG20AG18CT73GA11AG11TG2GA18TG19CG23GA29CT36CA3CA24CT23GA30GATC7TC34GA2TC29GA2TC8GT8TG44TC14CT14AG8AG6TC31GA2GA11CT41AT5CTTA8GA5GA27AT30AG4TC50GA57TC9CT7GA17CT26GA4CA14TC5AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG5AG11AG49AG11AG61GA3CT9TC30AG13AT29CT3CA25CT2TC8AG40GA36GA6AG11GA4AG21AT16GA8TC11GA51CA19AT21CT30GA21AG29TC5CTAG10AG23CT15GA7AGGA94GAGC66AG6CT17AG18GA10CT38TC51CGAT9CA41AG2GA14CT5CT2TC16AG21GA24GA43GA28CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG33AG13TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA6CT19AG4CT1AGCA12GA17CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGAC9AG3AG8CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC32TA77TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA7AC11CTCT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3T-1TC2-A2GCAC5CT11GC13GACT24TC6TA1AC17TA11GA24AC3GT27AG5CA2-A1GA1CACT1GTGC2GC1AC2AG1C-AG1CAAG2-G-G-GTG14TC1TA2TC11GT7AC8-T-A3-A3CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT5AT14CAAT29GA53GA3CT18CG6TG9A-A-T-2AG2T-C-T-AG3CGGACTCA4CT1ACTC4C-T-T-6AGTCAGAGTG1C-TG3TG5A-T-A-A-C-3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT12GA2GA11G-A-A-G-G-T-1GA2G-A-A-7G-G-G-2AGAC4GA1AT3TC2AG24AG40TA30GA5ATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10-A-A-A3-T-C-C4AC2CG1TG12GA6TGAT1GAGC2CT2AGCA1TA6GAGA4AG8GA15GA1GAAGAC1GA1TA6GA18TC2TGAC7AG4AC6-G-A-A1GT12GA6CATG23GA2AT2GA1TC3TC36AT7GA18ATAT5AG8A-T-G-7TAAGAGTG1GCGA3GAGATC6TGCG2AG1AGGA3TA5AC30TA8GA9GA22CAAGAT2GA35GACT2GATC12A-A-G-C-A-A-CT5TC1GATC5TGAT1AC4CT6GA59CA18AG11CA1TG20AG2GA12AG5CA1TA8CG44GC3GA52AG14AG66GA8TG71AGAC6CT6AGTC8A-C-C-C-T-A-G-A-T-1GT4GA6AG2TAGC9CA1AC3TC8AT1CG7AC1AGGA6GA11GAAG1AT5TC1TCATAC10CG4AG2GA5AG6CA13CA7CA9GA24GA4TA3CA1GT5AG12AT26AG20AG2AG4GT8AG20CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11TG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT10GA1CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC27AG3AC1GTTG6CG2GA9C-A-G-8AG19GC18GA16GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG9AG5GT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT99CAAGCTTG1ATATG-G-4C-41
+MK115030.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9126,9719,598,8529,9126,1,594,0.0,670,89.632,536,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1ATAG1AG15GT3GCACAGCG1CG8AG2GACG35GA25TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT99CAAGCTTG1ATATG-G-4C-41
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+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,9036,130,9032,649,9627,0.0,10320,90.317,8161,plus,18AG72-A-C-T-G-G-T-G-A-G-T-A-C-G-C-C-A-A-A-A-A47GA23CTACAG6GA31GA6GA29AG2GA75GT19GA7AG8TA13GATC20AG48AG20GAAG28TC1AG2GACT35GC53GA20AT2TC11AG17CA29GA38TC17AG2TC30TG22GT23GA2GA23CT2CT14GA47CT2CT47TC59TC77GA5AG14AG2CT17TA5AG29CT8GA32GT23CT3AGAC1GA2GA1GA10AG14GA12GT34TC29GA60AT14AG12CT19CT4CT3AG5GAAC4AG17GA11TG1TC5AT1AG13TCTC23CA7AG2CT3CT1GATA9AGAG20TC1AC6GA3GA54GA8CA4AG3AG55AG16-C3G-7TC30AG19TC35TC20TC8AG40GA43AGCT11ACGA2AG25GA31AG7AC32GA11TC56CT69CT5AG13AG25CT39AG83TA11AC63GA7AG19AG6GATC40TC51CGATAG8GA23TC8AG8AG2GA23TC20GA11AC9GA4GA2GA12GA43GA2AG2CT36AT40TC38CTTC24CTAG54GA31CT10GA3AG5TA5AG12TA13AG38CT38AG12AG13TC23TC2AG2AG2AT4CT18CT3GA1CT18AG1TCTA44CT19AG53GA12AC4CT32AG6CA16CT32GA30TG10AG2GA11GA14AG8AT2TA5AG35CT8AG9AG52TC39TC26AG25TC35GA5AG14CT5CT28CA12AT9CACG3CT6AG2AGAC1GA1AG4AG18AG2GAGA4AG2AG8CA29TA18CG7AGCA10GA11GT99AG92GA13GA14TC23GA32AG13TC3AG2TC34GA30AGCA1TCGA8CT9TC7AGCT2AGAT9GA13GT22ACGCAT38A-3GTA-G-6CT1AG3GA1GA14CT35AG25GA57TC3AG1TC11AC12CA1AG3AT10TC1GT6TC29TC14GA2GA12AGTC10CA9GA2GT21GT1GC25GA9GA17AG6TC19AG8AG8AG1GAAT11GA2CT9GACTAT5TC2CT3CT4AG23AG23TCCA9CT13GC7TC2-T12AG4AGGA2CT5GA6AG2CATC1ACCGCA2TG2AG2GA30GA20GA11GA8CT4GA14GA8AT8CAGACGGTAT2CT3TA9GC46AG3CA4GA1TC1AGCT4ACCT7TC4TC7AG4GA14TC4TC2TA2GCAC4TG26TA1TA14CT2TG5TC6TA20ATGT8AGGA1GA10AT2CA8AC3GT36G-G-A-C-C-A-4GAAT2T-G-G-4CA2CT12AGA-C-C-A-T-G-C-T-C-A-T-T-3GA6CG17GT2CTAG4CT5AG2-C-T-A5GA1CA1CT36AG35CT11CTCA10CT5CT14TC34AT2-T-G-G22TCGACTAG9AG10TA76CG6CG8GT9AGGACT4CA2TCAC2CT1AG2CGCT2TC-G-G-G2TA2-G1GT2-T-G-G-A1-A7AG2GA8TC5TC3GACT2CG4GACGAC7AG9AG3CG8CT9GA7GA2GA3AC3TAAG1GTGA6AC12T-A-C-C-A-G-A-T-A-T-A-G-5TC2AG7TA2GT2AGCT51-T-T-G-T-G-C-C-C-C-G-G-C-T1-G-T-T-T-T-G-C-G-A-T-T-C-T-A-A-A-A-T-G-T-A-A-T-A-A-T-A-A-G-A-C-G-T-T-C-A-A-T-G-G-A-A-C-A-G-G-A-C-C-A-T-G-T-A-C-A-A-A-T-G-T-C-A-G-C-A-C-A45TC24GA3TG15AGATAC6TA1TGAG3GA4CA16AGTC1AG3GAAC1AT31TC14TA2AC1AG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA4AG3AC35GA1GC9AC8GAAGTC8GA9-G-G3ATGA1GT1GA-A6GA7CG23GA7TC16AG23AT26ATAT2GA2CG3AT-T6ACA-2GAT-A-C-3AGGT7TC2AT4TG2AG1-G-A-C1TCTA5AC10AGGA5GA6GA14GA46TA23AG3CT2CATC21T-G-A-2CAGT2T-A-A-C-A-C-1AT1TC2AG29AG39CA36GA46CT46AC5AG14AG8CA20AG20AG21AC7GA36GA10AG11TA47CT9AGAC13AGGC16ATAC4AGGATATC1CG9AC3TC10CG7AC1AG7GA11GAAGGCGT5TC2ATAC10CG46GA22CA7GA10GT18AT4TC20AGAG20AG60TA7GA2GC28CA1GA35GT2AGCA4CT1CA1TC4TC3AGAG2AC9TA3CT13TG17AG25GA5GAGT39GA17GA11CT23CT11CT36TG11TG1GA3AG2AGTC2TG10ACTG11CG25GACT10AG5AT4TAAG1TGCG6CA3AG2GT1GAGT3GA6GA1ATAG23CG14GA4AG25GA9TACA9AG7CG6AC8AC12GA7A-G-G-6GA3AG2AG8CT7GC27AT7GC49TC5TC8CAAG25GA5AC7GA16GA25AG1AC28TA9GA3AG1GT2AG5GTGA1TGGA5AG6CA1GA8GA3AC2TG17AG2AT12CT5AG2TG1AG11TA5AG21CT1GA16AC1AG13AT15GT7TG2-A-C27G-10AGAC11AT22GC56AT22GA41
+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,543,8492,9032,1,542,4.15e-180,629,90.792,493,plus,8TC5TC9AG25GA5AC7GA16GA27AC28TA9GA3AG1GT2AG6GA1TGGT5AG1GA4CATCGA8GA3AC2TG17AG2AT6GA5CT5AG2TG1AG11TA5AG21CT1GA4GA11AC1AG13AT15GT7TG2-A-C27G-10AGAC11AT22GC56AT22GA41
+MK115211.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9032,9719,150,1,129,782,633,2.35e-34,145,84.667,127,minus,23-T-T-T-T-T-G-G-C-G-T-A-C-T-C-A-C-C-A-G-T72TC12AG16-C4
+MK115158.1,Ref.47_BF.ES.08.P1942.GQ372987,0,9143,8926,8919,162,9029,68,8923,0.0,9530,87.790,7830,plus,27A-C-C-T-2T-A-2TCAC2GA1TG1CGCACA1CGCT1AG1T-C-TA1TC3CGTA38AT1AG21-C-T-G-G-T-G-A-G-T3-C-C-A-A-A-A-A-T-T-T-T43GA20AG2CT1AG6GA20GA9CAAC6GA2AG26AG2GA11ATGC82GA7AG4TC8AG8GATC20GA3AC2GTAG25CT2GA11AG21AGCT6A-G-C-10CA9GA37AGTCGC8AC3GA8GC1CT2AT26GA2AG2AG8GA38CA12GTCG15GA5GC3CT4CT23TC9TC7AC2TC2CT23TC5GA17GA2GT2TCGC16AG5GT11CT5AT5CT17GA6GCGA11AGTC2TC6AG7AG5AT5CT11AC5GA29TC3AGCT7CT9GA6AG5GA14CT5AG3CA6AT4AGCTTC18TA7GT35GA3GT1AG32AG2TA3GCCAAG32GA11AG11GA14GA16TC4AGACCT3GACA1TGCT1GA1GA19TA4AG4AG8GT2TC19AG17GA23GA12AG8GA20TC2TC5GA8AT17CT9CAAG18CT4CTTC2AG1GA3AGAC4AG11AG4ACGA8CGAG1TG5GA2AGAG2A-C-A-5TC2TC4AC9GA1CA2TA2A-C-C-3AG3AG2CT3-C-C-CAT1GATG9AG21TC12GAGAAG7GA2AGCA1AG38GA8AC2GA1GA1CT1AG7GA6GA40AG12GA3-A3G-14CA1TG21AG19TC26GA8TC47AG22GAAG2TC14GA2AG22CT6TC4ACGA23TC36AG7AC20TA11GA26GA11CT2CT5AG17AG2CT2CT5GA27CT1GA8TA21CT2GT2AG4CA8AG101CT5TC8AG1GA24AG11GA2TG2AC63GA22GATC4GA6TC4CT32AC2TC20CA30CGATAG4CA3GA2AG4GA15TC8AG11GA23TC17GA2GA5TC1AG3AC5AG3GA7GA8ACGA14GA4AG32CTCT13GA5AG15AT40TC17TC5AG14CTTC22AGAT10TC16AG3AG24GA25AG2GA2CT20TA4AG3AG9TA13AC14TC32TC2CTTC4GA2AG17AG50TC2AG2AG2AT4CT18CT3GA1CT1GA9AG6AG19AC26TC1AT9GA41AG20GA14AG2CT8GA30CA1AC18GT22AG5GA26CT3TG10AG2GA11GA5AG8GA11TA16GA9AG8TC5CT8AC8AG11AG28TA52TC26AG22AG2TC35GA5AG49CA22CACG3CT8TC1AC1GA25AG3GA4AG2AG38TA11GA5AGCG7AGCA14GA7GT26AG34AG37AG20AC73TC3CG22TA2TC11GA8AG2AC8TC8CA11AG17AG2TA34GA10AG19AG2TAGA14AT16AC4GAGA3GA2TC1GAGAGAGA5GTTC3AC9AT9AG7GA6TC3GA13AW4GAAG1GA3GAGACA2GA1CT7GA14CT3CA7AG23AG21AC1AGAG3GAAG5CG6GA9AG3AG11AG6CA1GA9AG25AGCA25TC9GA1AC17TC14GA2GA2CT10TC10CG1ATCA4AG1GA1AGGC6AG14GCACGA4CTGTGAAGCT1GRARGA2TC9GA9GA44AG8AG10GAAT8TC2GA2CT9GC7TC2CT3CT1GA14TCGA1AC2TC5AG10CAAG5GT6CA7AG2TG8AT2GAGC7TC14AG2TCCA1GT2CT4GAGA9CA2ACCGCA2TG6GA29GA20GA2TC17CT4GATA2CT8AG1AGGA7AT8CAGACGGTAT6TA54GR1AC8GAAGTCAGAGCT4ACCT7TA4TC7AG10TC1CT13CT5AG18TC11TGTCTA3AT13TG33ATGT4CG3AGGA1GA1AG2GT1CT1GAGAAT2CA4TC38TC2AG2GA2CT11GAGT4CACA1CG5GA1TG4AC1CT1AT5AC2TG2GAGT2GTGAG-C-C-A-C-C-3CA2C-T-T-G-G-G-A-3C-4A-C-3TA2TA1-T1AT3GA1CG1CT72CT2AG8CT7TC3CT5CT14TC30GA1AGGTAT3-G-A-A21TCGACTAG8TC23GA8CT41CA5CT8TC5CT4CA1GA1-T-A-C-T2-C-A-C-C-A-C-T-A-A2-C-T-A-G-C1AT5GACT1CG15CT2TC5TC3GACT6ACGCCA2TCAG4A-T-A-A-2TA1CA2AG1-G1CG18GAAC11AG3A-3A-1GA2-C-A2TC2TA2CT2C-T-A-T-A-A-3CT2AC13AG7TA5AGCT12CT9GA37GA26GT6AC1TG16TC4GA7TC29AG18CT2TC13TC10GA4GA2GA4TC2AG3AC5TA4TAAG1CT1GA3TACA3CG12AG2AG2CT3AT2GA2GAAGAC10CT7AGAG27AG8GC1GAAG1CT18CT9GA30GA13GA1GC7AG1AC7TCGAAGTA6AG1GA11AC1GAGTGA1GA14CT23GA11CT1GC6TC3AG29CTAC15TA3AG1TG1GA1AGCA4GAGAATGA1AT1AC2GAT-A-C-2GA1GT6AGTCAT4AT1T-1AC1TC1T-T-10CA6GA5GA6GA5AT47CT1AC4GATC14TC8AGCA2CT2CG18GA2AGTAG-3CA1G-A-1AG1C-A-C-2CG3AG1TC11GA7GA6GAAG39CA17GA18GA19GC17AT1AT6CT46AG3AG1AGAG13AG7AT21AG12TC7AG29GA47AG11TA12CA2CA26CTTA13AGAC14GC3TC12ATAC1CT-A3G-1TC1TG2CT5TG35CT9GAAGGT10AG8AC2AT7AG40TC11TC7CA13AT4GC23TC21AG4TA15AG1TAGA34TC8AG2GA2TC7TA2TA6CTGC21AG8GA34AG3AGCA1TCAG3CAAGTC12AC8GA7GA10TG41TC7GAGTAT30GCCT6GA2TC8TC5GA11CT20TCGA1CT8CT2CTGA7CA4CT21GATA9TCAT8ATAGTC1TGTG7AG2AC12CG18GA11GA13GAGA2TAAG1TGCG6CA3AG1GAGTGA1GT3GA6GA1AT14GA6GA1TC1ACGT3GACT6TA5AG7CTAC11-A6A-8TACA9AG3TC3CG7CT3GC4TC1GTTG18G-A-A-5GT2AG5GA2TC38AT12GT1AC9CTAT39CT3CAAGAGCA10TG11GA5CT3AC7GA2CA39AG1AC2AG6CT10AG17GA3AG1GT2AC8TG13CA9GAGA5ATTG4TC7TCGA3AG3GA5GA5CG2CTTGCA3GC8GATC1AGGA16CA1GA8TCCTCAGATG5GA9AC13CT6AG10GT24GA2AG10AGGA6CT3AGAC31AG2
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+MK114705.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9411,9719,91,8973,9063,9629,9719,9.52e-29,126,97.802,89,plus,62AC10CT17
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+MK115009.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9207,9719,9078,150,9207,636,9627,0.0,9749,87.905,7980,plus,31AG41-A23CG21GA3TA38TG20CG3AG8AC3AG10TCAGCGCT9AGAG16GA17AG30CT2CT14GATA13CT2GA5TA2AG15GT50GATC9CT2AG12AG1TGGA20CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC11AG8AGCG1ACTA24AG10AG28AG18CT8AG41AG1AG20GA11AG11TG2GA10AG7TG19CG22AG9AG20CT24AG3AG7CA28CT20AGAG1GACT4CT24GATC7TC14AG7AG10AG3TC11AG16AGGA2TC8GT8TG10AG18AG14TC14CT14AG8AG6TC32AG13CT41GT5CTTA7AGGA4AGGA12AG14AT28AG1AG10AG17AG6AG7AGAG6AG8AG23AG6C-1G-A-C-T-A-A-G-A-C-13AG7TC9CT15AG9CT26GA4CA14TC2AG2AT4GA5GA4TC15AC3AT4CA1AG15GA10AG20AC1ACAG1ACTA7AG5AG11AG47AG1AG11AG2AG16AGAGAGAG5AG2AG29GA3CT9TC30AG10GA2AT12AG16CT3CA2AG22CT2TC8AG21TC7AG3AG6GA36GA6AG11GA4AG2AG9AGAG7AT8AG7GA8TC44AG1AG16CA19AT10AGAG9CT2AG49AG5AG23TC5CTAG10AG23CT15GA6AGAGGA3AG25AG3AG4AG55GAGC31AG15AG18AG6CT14AG2AG17AG5AG5CT14GA12AG10TC4AG3AGAG24AG16CGAT9CA10AG27AGAG1AG2GA7AG6CT5CT2TC4AG11AG46GA72CTAG33GA11AG2ACGA2AG5AG44AGGA13CT3AG26GA24GA2CATC4GACG12AGAG22AG2TC8AG7AG1AG3TCGA9AG18AG11AGAG2AG5CT17AG3CT3AG28AG10TC9AG2AGAG9TC2AGAG11AG9AGGA8GTGA1CT3AG10GA6TA6TCAT16GA4AG7CA6CT19AG4CT1AGCA12GA17CA3AGAGGA21AC1GA19GA16CT10AG6AG1TC2CT7AGAG2CA12AG6AG31AGAC1AG7AG1GA10CT5AG10AG8AT8AG16AG16AG52GA6TC11CG1TC6AG53AG5AG7AG21AG4CT18GC28CT3AC1CT19AG11TC9AT21AG1CTAG4AG4AGAG10AG2AG3AG1AGGA15AG1TA14TC9AG8AG13TAAG27AG48TC2TC51AG35CT14TA18AG22GA1AT71TC33CA4AG6AG58AG3CA21CT2AG5AGAG7CAAG1AG3AG1GT4CT19AC1AC6AG2CT22TC3AG3AT2AT13AC8AGAG32AG2CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA6AG7AG1AG7TC5AG8TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG7AG5AGGA2AG16CTCT12TC4CT2TC2-T10AG6AG9GA5ACAG3TC22AG17CATC9AG3AG14AG4TAGA10AC16CAGA24CT4CT7AGGC29AG19TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT8CT2GC13GACT24TC6TA1AC10AG6TA11GA18AG5AC3GT33CA-G3GA1CACT1ATGC2GC1AC2AG1C-C-1CG1CGTA1-G-G-G-G9AG4TC1TA2TC5AGAG3AGGT1AG5AC8CT1-C-A-G1CA2CA4AG16AGAGAG8AG1AG3AG8TC38GT6AGATGA10AG3AC2CA25GA6GA7CT3AG1AT14CAAT10AG18GA28AG24GA3CT18CG6TG9A-A-2TG2AGTACA1AG1C-T-1GAC-C-4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-3TG5AGT-G-A-A-A-2AG8AG21GA3CG4GA1AC7AG7ACCAAG6CT5CT4CT9AG2GA2GA11GA1AT4G-T-A-A-A-A-A-T-A-4GCGA2A-A-A-6AT3TC2AG24AG21AG18TA13AG16GA5ATGA6ACAG6AG8GCAC5GC28AG32CT4CT18AG2AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG12GA6TGAT2GC2CT2AGCA1TA4AG2GA4AG8GA4AG11-G2AC2GA2TGA-4GA18TC2TGAC7AG4AC5-G-G-A2GT12GA6CATG13AGAG8GA2AT2GA1TC3TC12AG3AG19AT7GA16AG1ATAT11AG1A-A-T-8TAAGAGTG1ACGA4GATC6TGCG2AG1AGGA3TA5AC30TA8GA5AG3GA22CAAGATAG1GA35GACT2GATC10AG1GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CT6GA3AG5AG9AG8AG7AG22CA6AG8AG2AG11CA1TG20AG1AGGA12AG1AGAG2CA1TA1AG6CG6AG7AGAG19AG8GC3GA10AG41AG14AG40AGAG22AG1GA8TG1AG14AG14AGAG6AGAGAG29AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAAC6AG2CA1AC3TC5AG2AT1CG3AGAG2AC1AG7GA11GAAG1AT5TC1TCATAC10CG4AG2GA5AG6CA13CA7CA9GA1AG11AGAG4AG4GA4TA3CA1GT1AG3AG1AG10AT10AG6AG8AG2AG17AG2AG4GT13AG9AG5CT8GA2AG2GT7TA11AC3AG18AG3CT7AGGA4AG2AG3AG8GA2CG5CTGTAC8CA1TCAG3TC3AG5CT4AG6CT13TG9TC13AG12AG4CTGAGA4AG5AG8AG8AGAGAG2AGAG5AC2GC2GA4AG2AG9GA7AG10AC13AT14CTAG7AC15AG9AGAGAG11TG5AG3GCCT1TG11TG11CG1CA16AG4AG1GACT13AG3AGAG5TG5GA3GTCATGCTAGAT1GACT1AG8GA1CTAG3AG3GA1AG3AG9A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-9AG3CA2AG3AGAG20AG3GA10CA1TC31AC1GTTG6CG12CG2AG2A-A-A-2AG5AGAG12GC18GA15AGGC4CG5AC22AG11TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC3AG3AG5TA18TG8AGGA12GA1GATA1AG9AC1TA8ACGA3CT1ATAG1AG7AG1AG5GT3GCACAGCG1CG8AG2GACG35AG1AG23TC1AT4GA10CTTC3AC2TG6AGAG11AGAG10G-14AG3AG4AT1AG20GC21CT10AG9AG20AG19AG37
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+MK115491.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9422,9719,9144,312,9387,577,9686,0.0,10905,92.104,8422,plus,25-G-A-C3-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A23C-TA1TA2TG1AC2A-2GA1T-C-C-C-TG1TG3TGCGTGCATA1GC3TA2CA2C-C-G-AT4GC1T-A-2TGACGAAG5AG18AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT96TC26G-A-C-T-C-G-C-25
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+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,7800,1191,8938,1230,8996,0.0,8979,90.526,7061,plus,2CG17-G-A-C7AG5GA33AGGA4CT15CT5TC3AGTA6TC5ACACAG15CT4GAAG13AG7CA13GA13GC3GA24CA19GA14CT20AG13ACGA27GA8CT14CA1GA7GA10TC1CT3GA2TG34TA7AGGA37AG27TAGA11AG65CTCTAG9AG24GA3GA47AC4GT17CT11CT16GA28AG76GA8GA30AG55GA11GA11TC17GA8GA11AG2AG20AG35AC14TC5GA20CG3GATC79GTCG15TC14GA2GA14GA5TC18CT1AG3AG13GA3TA4AG8GA29AG11GA14CT2GA2GA23CT8GT32GA6AGCTAG5AG41AG8AG20TCGC15GA21AG9TG27GA46CA1GA32CT12TA4AG8AG8GA5TA5GA11AG14GA11GA11AG1AG4AG29CG4TA41AG11TC1GA63CT17TC17AG20GA5CG20AC8CA8AG2CT2TC5TG26TG3GA4GA12AG5CT22GA21TC8CT10AG4CT9CT6TA10GA6AT7TCCA19GA12TA6AG22AC10AG9AG7GA11AG57TC4CTTC28AG5GA50CTAG41TC16AG8AG44GA32GA14TA44TC3AC31CA26CT5TC2CT3GA7AG2CT14AG23TC38GA35GA5AG14GA23CT33AG31GA6TA10AG95CT2CG35CT5AC41CT36GA20TAGA10CT8GA9CT9GA5TC1GA2AG5GT1TG4AG10GC4TC1CT1AC25CT11GA2TG5AC2AGAGAT5CAAG32CA11CT2GA20AG3AGAGGA2CA5TC14TA1AGACGC16CT44AT6GT9GT48CT15TC2GA8GATG2AC1TC4AG4CT18CT4CG3GA5GA25GA11GA5GA2AG5TC9GA27GAAT14TC2CT7TC6TC2GCAG1CA5AG5CTGA9CA9TC6AG10AG15TC8AC7CT11AG10AG20TC2GT2GA1GA5AG20CT5CA4CA12CT20TG7CA2AC15GA2CT5AT28GC46CG7AGAGGA1AC2AC2GA8AGAC1CT5CT14AGCT6CA5AC5GA6GTGT2CG20GC1AGCG24TC6CA30AG9TC2AGAT4AT9GA40CT8GA2AG8GT5AG1GT7GCAT10AG2GA8CTTA11AGCA36AG5GA53GA20GA17GA21TG6GT13GA7TYGACTAG4AC11TC3GA38CTTC22CT5TC7TC3GACA11GT1CG1AGCA7-C-T-A-A-T-A-C-C-A-A-T-A-G-T-A-C-C-G-C-C-G-A-G7-A1AGTC2CA7CA1AG28AGAC4CGAG6GT1AG33GA17A-A-G-6G-A-T-2T-A-G-C-T-T-T-A-A-T-A-A-T-A-A-33TC5AC5TC38CT3AG12AT3AG7GA6CTAG2GA3CAAG11AC2GA7CA10TA2AG21GA9GA15TC17AG2CG1GA18CG7CTTA1GA7TC24GAAGCACA6AG7CT8GA2CT2TC3AT7AG5TA3CAAC1GACTAG10AG4ATTA4GA30AG9CT9-A3G-2GA1GA6GA1TC19CA7CA11GAGAGC5AT11CT2TGCA4GC25CTAG10AT18TC1AT13CA24AGTC1AC2GATAAGCGTA3-G2TGTAGT1AG1TG2TG1CA2GAT-17TC1AG5GAGA21AG22TC9CG1TA10AG3TCTA1AC35TA6GC1GA1GA2AG2GC1-A-A-C-G-A-G-A-C-T4CT12CA6GA26TC21GA16CG50AG1AG4CT1C-T-G-27AG29AG22GA1AT21GA19AG48TC2AG18CT1GA18CA46TC35CT12AG4AG6GA17GC1GA7AG8GATC9CGAGAC11TC17GA1GA3GA16AT3AT3TC2GCCA1CT7GA4ACCA2CT7GA7AGGATC8AC41CA2AGAG4GT9GA22AG5AG14TC8GA2AG10GA1TC30AG15CA22GC4AGCG9AGAGCACT9CG2CA9AT3CT3AC3GA47CT1GA24AG13AGTC7CT9GA9AG20AG2AT57AG11GT9CT2GA13CA8GATC4CA1AC5AG5AG5AG19GA15GTTG4T-2T-T-G-G-A-23AG5-A-A-C-T-A-A-G-C-C5GA12AT2GA10TC4CA10CA22AG7CG7TC7CA30-G-G-G12TC5TC1GAGA5AG33TC1GA42AC1GA2AT8GA35CT29CT11AG11GA2TC26AG9CG5AC4GCCA9CA5CA2GA3AG2GA21TA3AG15TA10GA6AGCT20AC4AG5TG7GTAG3ACAG4CATA18AG11CT1AG2TC3AC30G-24-G37CT5CT-T33TA22GA2GA45AC26
+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,1137,58,1194,1219,86,0.0,1395,92.964,1057,minus,2TC11TA2CT83TC41AC8AG17GA2TC48TC17AGCT3AG8TC28CT9AG2GA2AT5TC19TG48AG23TC13CT66TC8TG23AG16TA23CA15AG17AG50CT26GC1GTGA17GA8GA9TC1AG3CT3CT1CTCT18TC2CTAT4GA11CT14AC4GACA3CT12GT2TC7CT9TC12CT4CT16TC4CT8CT5TC2GA3GCAT3CT41TC2CT49GT9CT17TC7TG12TC6TCGTGA7TG57GTTC4A-C-T-25
+MK116110.1,Ref.B.TH.90.BK132.AY173951,0,8967,8996,57,1,57,4,60,1.43e-11,69.7,91.228,52,plus,14TAAGGA8AG2TC28
+MK115527.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9481,9719,9071,480,9481,576,9625,0.0,10861,92.239,8367,plus,26-G-A-C-C-C-T-T2-A-G-T-C-A-G-T-G-T-G-G-A15C-3A-1ACTC2G-G-C-TA1GA1TGAG2TCAT2GA1TG1CGTACA2TGAG2TA17GA29AG35G-A-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT10AG25GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT7CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA25AT9GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA5AG23GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115527.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9481,9719,542,8949,9481,1,540,8.48e-179,625,90.775,492,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AG13GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK114997.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9055,9719,9035,70,9055,648,9621,0.0,10441,90.747,8199,plus,19AG41-A23CG21GA3TA59CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA69GATC9CT2AG12AG1TGGA20CT6CAAG11AG20GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG13CA23GAAG28AG18CT73GA11AG11TG2GA18TG19CG23GA29CT36CA3CA24CT23GA30GATC7TC34GA2TC8TC20GA2TC8GT8TG59CT14AG8AG6TC31GA2GA11CT47CTTA8GACT3AGGA21AG2GA2AT30AG4TC50GA57TC9CT25CT26GA4CA14TC5AT4GA5GA20AC3ATGA21GA10AG20AC1ACAG1ACTA6GAAG5AG11AG49AG11AG61GA3CT9TC30AG13AT29CT3CA25CT2TC8AG40GA27CA8GA6AG11GA4AG21AT16GA8TC11GA51CA19AT21CT30GA21AG29TC5CTCG10AG23CT15GA7AGGA94GAGC66AG6CT17AG18GA10CT38TC51CGAT9CA41AG2GA14CT5CT2TC16AG21GA24GA43GA20CA7CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG33AG13TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA6CT19AG4CT1AGCA30CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGAC9AG3AG8CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC1CA26CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC32TA77TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA25AGGACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT24GA23CT15TC2AG21GA2GT9CT5CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG10GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA20CT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CTCA7GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2ACAC5CT11GC14CT24TC6TA1AC17TA11GA24AC3GT27AG5CA5CACA-T1GTGC2GC1AC2AG1C-A-1CG1CGTA1-G-G-G-G14TC1TA2TC11GT7AC8CT1-C-A-G1CA2CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT4AGAT14CAAT29GA53GA3CT18CG6TG9A-G-2TG3-A-A-T-G-A2AC6TC3TAAG2AG1-A-G-C-G-G-G-A-G-A-A-T-G4CT3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT4GA7GA2GA2TC8GA1AT4G-T-G-G-A-A-A-T-A-4GCGA2A-A-A-4GA1AT3TC2AG24AG12AG27TA30GA4GAATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC1CT5AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG19TGAT1GAGC2CT2AGCA1TA6GAGA4AG8GA15GA1GAAGAC1GA1TA6GA11ACA-6TC2TGAC7AG4AC6-G-A-A1GT12GA7TG23GA2AT2GA1TC3TC36AT7GA18-T-T-T3GA5-T-G2TGAT1TC2G-2TG3-C-A-A-A-T-A-A-C6TGCG2AG1AG4TA5AC30TA8GA9GA12TC9CAAGAT2GA35GACT2GATC12GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CTAC5GA59CA18AG11CA1TG20AG2GA18CA1TA8CG44GC3GA52AG14AG66GA8CG71AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAGC9CA1AC3TC8GT1CG7AC1AGGA6GA11GAAG1ATCT4TC1TCATAC10CGTA3AG2GA5AG6CA13CA7CA9GA16GA7GA4TA3CA1GT5AG12AT26AG20AG2AG4GT29CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11CG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT10GA1CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC31AC1GTTG6CG2GA9CG8G-A-A-19GC18GA10TA5GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG3TG5AG5GT3GCACAGCG1CG8AG2GACG16TC18AG22AG2TC6GA10CTTC3AC2TG31G-23AT22GC21CT93
+MK114997.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9055,9719,537,8519,9055,1,536,6.00e-175,612,89.944,483,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1ATAG1AG3TG11GT3GCACAGCG1CG8AG2GACG16TC41AG2TC6GA10CTTC3AC2TG31G-23AT22GC21CT93
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,9023,565,9537,623,9625,0.0,10895,92.563,8352,plus,26A-C-T-C-TG4T-13TGAG20GA29AG35G-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC4AG8GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT18GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,542,9005,9537,1,540,6.18e-178,622,90.590,491,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GA5GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
+MK115518.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9537,9719,28,370,397,622,649,0.002,42.5,100.000,28,plus,28
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,8984,200,9165,768,9676,0.0,10431,90.895,8166,plus,51CG12AC14TCAGCGCT27GA48CT2CT14GATA13CT2GA5TA18GT50GATC9CT2AG4CA7AG1TGGA13AG6CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC20AGCG2TA35AG28AG18CT73GA11AG10CATG2GA18TG19CG23GA29CT36CA25TA2CT23GA30GATC7TC34GA2TC29GA2TC8GT8TG44TC14CT14AG8AG6TC31GA2GA11CT41AT5CTTA8GA5GA24GA2AT30AG10AG44GA57TC9CT25CT26GA4CA14TC5AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG5AG11AG49AG11AG65CT9TC30AG13AT29CT3CA25CT2TC8AG40GA36GA6AG11GA4AG21AT16GA8TC63CA19AT21CT52AG29TC5CTAG10AG23CT15GA7AGGA94GAGC55TC10AG6CT17AG18GA10CT38TC51CGAT9CA15AG25AG2GA14CT2AG2CT2TC16AG21GA24GA43GA28CTAG33GA14GCGA2AG51GA13CT30GA24GA2CATC4GACG36AG2TC22TCGA44AG5CT17AG47TC23TC2AG23GA8GTGA1CT14GA6TA6TCGT16GA12CA2TA3CT19AG4CT1AGCA12GA17CA5GA21AC1GA19GA16CT17AG1TC2CT11CA51AGGC9AG12CT1GA23AT8AG86GA6TC11CG1TC41GA24AG34CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG9AG18AG2GA17TA14TC110TC54AG35CT14TA41GA1AT71TC33CA74CA21CT2AG5AGAG7CAAG1AG5GT4CT19AC1AC6AG2CT22TC7AT2AT13AC45CT8AC19GA26GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6TC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA14AG9TC14TC7CT5AG2AG7GA12GA11AGCACTAT5TC3AG7AG3TC19AG14GA19CTCT12TC4CT2TC2-T17AG9GA5ACAG3TC40CATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC49TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT11GC13GACT24TC6TA1AC17TA11GA24AC3GT27AG5CA2GA2CACA-T1GTGC2GC1GC2AG1C-A-1CG1CGTA1-G-G-G-G14TC1TA2TC11GT7AC8CT1-C-A-G1CA2CA32AG5AG8TC38GT6AGATGA14AC2CA25GA6GA7CT5AT14CAAT29GA53GA3CT18CG6TG9A-A-2TG2AGT-C-T-A-3CGGACTCA4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-3TG5A-T-A-A-C-3AG8AG21GA3CG4GA1AC7AG2GA4ACCAAG6CT5CT4CT12GA2GA11GA1AT1G-T-A-G-T-G-G-A-A-7GCGA2A-A-A-4GA1AT3TC2AG24AG40TA30GA5ATGA6ACAG15GCAC5GC61CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG12GA6TGAT1GAGC2CT2AGCA1TA7GA4AG8GA15GA1GAAGAC1GA1TA6GA18TC2TGAC7AG4AC6-G-A-A1GT12GA6CATG23GA2AT2GA1TC3TC36AT7GA18ATAT14A-T-G-7CAAGAGTG1GCGA3GAGATC6TGCG2AG1AGGA3TA5AC30TA8GA9GA22CAAGAT2GA35GACT2GATC12GTA-G-C-A-A-C-5TC1GATC5TGAT1AC4CT6GA59CA18AG11CA1TG20AG2GA12AG1AG3CA1TA8CG44GC3GA52AG14AG66GA8TG71AGAC6CT6AGTC9C-C-C-1A-G-A-T-G-G-4GA6AG2TAGC9CA1AC3TC8AT1CG7AC1AGGA6GA11GAAG1AT5TC1TCATAC1CT8CG4AG2GA5AG6CA13CA7CA9GA24GA4TA3CA1GT5AG12AT26AG20AG2AG4GT29CT8GA2AG2GT7TA11AC26CT8GA20GA2CG5CTGTAC8CA1TC4TC3AG5CT11CT13TG9TC31CTGAGA40AC2GC2GA17GA18AC13AT14CTAG7AC27AG11TG5AG3GCCT1TG11TG11CG1CA16AG6GACT17AGAG5TG5GA1GA1GTCATGCTAGGT1GACT12CTAG7GA15A-G-G-C-C-A-G-T-A-A-G-A-G-A-G-C-C-A-13CA1GA30GA10CA1TC31AC1GTTG6CG2GA9CG8G-A-A-19GC18GA16GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA24AG7TA7TAGCTC13TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1AT2AG9AG5GT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT105ATTC41
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,592,8574,9165,1,591,0.0,690,90.878,538,plus,4TA9TC5AC2AC10CT15CA5AC22CT1GA24AGGA6TA7TAGCTC13TA18TG5TG3GT7GA4GATCGATA11AC1TA8ACGA3CT1AT2AG15GT3GCACAGCG1CG8AG2GACG35GA25TC1AT4GA10CTTC3AC2TG31G-23AT22GC21CT105ATTC41
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,129,1,128,778,650,1.18e-41,169,96.124,124,minus,19AT3CT21GC23-T41TC17
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,72,130,201,623,694,1.90e-21,102,98.611,71,plus,44AG27
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,48,9167,9214,463,510,5.46e-12,71.1,100.000,48,plus,48
+MK115065.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9214,9719,48,9167,9214,9548,9595,5.46e-12,71.1,100.000,48,plus,48
+MK115464.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9663,9719,9068,648,9663,640,9643,0.0,10103,89.314,8099,plus,27TGAGGA62AG22-A-A-A13AG20AGAG13TA24ACAG27AG10GA57CT2CT5TG9AT7AC4AG11AG6GA13CA29TA31AC1GA2AG6GA2CA16CT5AC8AG26GA8GA4TC8AC4ACGATC1CG2GACT20GT12CA31GA19AG3GA20CT2TC8GA2AG23GA95GA10AGAG30GA75CG2AG8GA27CT20AG11GA30TC9AG49GATCCT17AT8TG10AG15AG2AG11AG32AGAG7AG2AT35GA17AG42AGAC2TC41CT28AG6TC100AG18CA3AG9AG4CT52TC1AG3ATGA6GA7TC18GA1GA5AG3GC11GA9AGAG40AG5GA35CT17AG16AG17AGAG11CT30ACCTTC68CA6TC14AG4TC20TC8AG12CA7AG8AG3AG67AG8AG3AGAGAG2GA12AG61AG19AGGA11AG16AGAG12AG10CT6AG13GA6AG10AG5AG18AG11AG9AG33TC3AG9AG35AG4AG30TC24GA32AG5CT9AG17AG25AG11CTTC6AG2AG1AG2TC1GT11TC20CT8GT5AGAG52CA5TC27CT4AGAG1AG11AG14TCGC3AG9GA2AG19AG4GA7GA11GA4AC38AG3AG22AG36GATA11AG10GA50GA10CT3AG3AG64GA5AG8CT4GA9AG8GA2AG7AGAG2TA2CA1AG9AG16AG6CT4AGAG8CT25AG6AG5AG5GA2TC2TA14TC12AG10TC1AGAG12AG21GACT14GA6TA31AGCT1GA10GA6AT11AG39CT2AG4AC18AC1GA12AT46CT2TG4AG16AG5AG2AG32AG13CA12AG19AT2GA3AG12AG5AGAG45AG13TC11CT9AGAG8CT4AG20AG11TC34AG21AG31GA8AG11CT2CT2CT17GA1AG6GA3GA10AT8AC1CG10AG12AG11AG2AG3AGAGAGGA13GT3CA25AG45AG35CA93CA19GA46AG4GA25AG2TC2TC79AG61CA32CTAG5AGAG6CTCAAGAG28AGTC35GA34AG33AG5AG19AG1GA3GA2AG16AGCA6CA20CT8TC5TC6GT4AC12GA5AT10TC1GT6TC47GA12AG8GA15CT21GT2AG51AG7AC22CT5AG10GAAT25CTAT5TC11AG22AG10AG7AG1GA4TA31TC2-T10AG4CT1AG16AG1CT24AG18TC34GA3CG10AT14AG2CT25CT8GC46CG3CA3AGGA18TCATCT5CT9GA7TC6TC4TC2TA2TCACTA3TG2AG23GACT4TA15AG1GT8CA12AG11AG6GA1GA6TC15AC7TA1AGGA32TACAAT1GT-C2GC1GC2AG1CGAGGACG2TGTG-G-G2AG5AG5TC10AG1AG13AG4AG2GA4CACA1GA1GT19AGAG14GAAG7AC37AGGA8CT11AG43AG5AT1AG1AT6AG6GA16GA3AG10TA28AG9TC14GA3CT18CG6TG2TC6AT1TG1GA4AGGA3CTGATA3TCTACA2AG2CG2CGTCTGCGTG1-G-A2AGCA2CA1TG-G2-A-A-A5AG2GA1CA7AT12CG11AGGA1AG4AG1AGAC1AG6GTCAGT3CT11AC5TA2GA2GCAC7G-A-2AT2A-A-A-A-T-A-A-C-A-G-2GC6AC4GA5TC2AG14CT9AG5CT15AG18TA13AG7AG8GA13AC5GA5AC27GA12AG6AG55AG1GA10AT4AT4AG6AG6AC13TC4ACGAAC1GT1CTAG2CGGA4TATACT4TC27TA2ACACAG3-C-C-A-G-A-G1AG7AG9TGAT5CT4GA1T-A-T-4AG2GA1CT2AG2GA21GA1-A-G-C3TA4GA23CGACCA5GA2AG5CT-T2AG1TACAAT2CT1CA3A-12TGTCCA4GT5AGAG9GA8AG18AGAG1AG4CT5TC9TA2TCCA15CT1AG1ATCT3AT1A-T-G-5GTAGTG3TAGC-T1CA1-G-G3TA3GA1TC3CG1GAAGAGTA3AG1TC-A-C-A5AC4AC25CA8GA5AG29AG9AGCA3AT19AGGC1TA12AG1GTAG1GT3-A1AC3TA1-T-G-A-G-T-C-C-G3CT3TC9AG3AG1AG6AG3TC12AG24GA13AG2AG19AG20GA11AGAG2CA8AT8AGAG6AG8CAAG10AG8GC2GA2AGGA9AT11GA1GT1CA17AG20AG21TC18AGAG5TC18GA10AG12CA16AG2AGCA4AG9AG20AG9AG4CGGC6AGGA3G-G-C-4C-A-A-A-A-2TCA-C-A-A-A-A-G-3AG2TAGC1CG4AG1GA2AC3TC5AG3AG4AG3AC1AG7GA20TC2AT8AGCA6AG2TATACA3AG3AG24CA11AG11AG5AG4GA5TA2CA1AT18AT25AG3AG39AG9AG5CT11AG10TA7GA7AG3GC14AG11AGGA4AG12AG2GA7GAGT17TC3AG10AG9AG8AG26CA17GA1TCCG1AG15AGAG6AG1AG3AGAG16AG2AG9GA5CT1AG27CT11CTAG7TC4TC9AGAG9AG1AG1AT6AG2TG5AG2AGTC1AT8TA3TG12GA17AG4AG1GACT13AG24AGAT1GA2AGAG2AG1ACAC1GA1AT2GA1AGAG8AG2A-C-G-A-G-C-T-C-A-G-C-C-A-A-C-A-G-C-A-G-A-T-A-A-A-G-A-23AG3AGAG11AC7AG6TC8CA1TC7AGGC14TC7AC24AG6G-A-T-5AG13GC7TG13CA8TC2AG6CG7GT39GA2TC9AG3GA41TC10GA22AG2AG10CA19TA13CG11CA2GA14GA12AC4CT11CG6AT4AG18AG7CT3TA6AG14CA12AG11ACAT11TA2AT3AGGA11AC6TG1CT2CA11AG-C-T-G-G-G2-C-T-T-T-C-C1-G-G12AG3AG4CT1AGAG19GC7AT10-T13AG9AG20AG11TG7AG44TC8
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+MK115530.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9544,9719,9071,541,9544,577,9625,0.0,10835,92.129,8357,plus,25-G-A4-T-T-T-A-G-T-C-A-G-T-G-T-G-G-A27A-C-T-C-T-G-1TG1AC2A-2GA1TG1CGCATA1CGTGCGCA2TC1TACG2CG10GA29AG35G-A-A-4TA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG34TC64CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG5GA5GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA18CA4GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC1AT54GA16CT3AC16AC35AG4GA2AG15TA8CA35TC11AC14TG3AT10TC7AGTC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT6TGCT59GT5AT21TC12AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG5AG42GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA23AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115530.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9544,9719,542,9012,9544,1,540,3.24e-176,616,90.221,489,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115520.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9589,9719,8890,661,9500,755,9626,0.0,10711,92.463,8220,plus,3CACA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC6AG12TC1TA2AG6TC1CA52AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG2AG14AG81A-T-G-G-G-21AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC1GT6TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT8CT37AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT67GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC7AG4AG17CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT19AG6AG12GA35GA22GA52GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT32TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC1TC4TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-A-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC10AC13GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA7GA6AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT83T-5
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+MK115520.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9589,9719,99,9492,9589,4443,4345,9.70e-29,126,94.949,94,minus,4GT7GA36AG20CT9-A18
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+MK115570.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9485,9719,9069,479,9485,577,9625,0.0,10895,92.370,8377,plus,25A-C-TG1ACACTCCT1CT3-T5CT1C-C-C-3CA1G-G-G-AT40TGAG20GA29AG20-A-C-T-G-G-T-G-A-G-T-A2ACAC4TA24GA23AG14AG8GCAG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2GT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA24GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA29TC5TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTTA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA13GT4AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AG19GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC16AT22GC18GT2CT8ACGT87
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+MK115702.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9098,9719,8943,204,9098,747,9608,0.0,10376,90.876,8127,plus,2GT2TG1AC15TC48CG2CA8CTACAG27AG4GA4CAGA45CA8CT2CT29CT1AG7AC7AG2CA6GT50GATC12AG5GA8TGGA4GA2TC5AG14AG32GAAG14G-C-C-12AC3AG2GACT2AG17CT14GC5AG26CT5CTCT20AG13AT14AG18CT7GA92GA32GT5AG3GA16AG2GA55CG10CA10CTGA16CT18TC5CT16GA12GATC7TC58GA11TC17AG6GAGA51CT22GCAG38GA9AG13GA8AT16CT4GAGA1GT2CGAC1GA27AG14CT9CT23TC1TC29GA42CT2CT29AG12CT13GA8CT35G-G-A-G-A-G-C-C-T-C-A-G-G-C-C-A-A-C-A-G-C-C-C-C-A-C-C-A-G-T-14TC5AT7GA2GA1CT3TCTC12AG4GT9GAAC3CA3CT3GA9AGAG19ACGC1AC24AC19CT33GACGGT75GCCT9TC14AT2TA32TC17AG38TC8AG14GA27AG58AG14AG14AT27AG31GA80TC5AG18AG25CA26AC32CT81TA16AC29AC23CT56AG2AG3GCGA11AG6GATC28GA43GA19AGAT9GA5AC1TG33AG8CT23AG10AGAG20GA12TC58AG39AT7AC23AG11GA56GA53GA6TA1TC44AG25TC12CG40GA3TC6CT4AG66TG4TC30AG5GA1CT14GA13AC9CA5AG5AT15CTTA6AT11AG10CT9GA45AC21GA34AG4CT3AG16TC20GA21AG4GA2TC9TC21GA9AT2GA7GA36CT68TC12AG25GA14CT12AG82CT3AC1CT41AT21AG2AG1CT2AG4AG21GAGA16TA17GA11GA32AT11CA50TC59TC45TA13CT27GA28TC20GA11GA41AG17CA60CA30AGAG4AG3AG27GA3AC9AG37GAAGGA6GA17TC4GTCA4GA5GA38AG3GAGA9AC5CA2GA6AG1CA24CT10TC11AC12CA1TG3AT10TC1GT54GA22GT1GA37TG5AG53TC28AG2AG6CA1GT11GA12CACTAT5TC3AG11TC34GA20GT20TC2-T17AG16AG3TCCT1CG22TG13AGCA35GA10AC25CT21CT1CAGC5GC35GA1AC5GA2TG3TA1AC1AGGAGA1CA5GA9ACCT31TC1TCTA1TC2TA1A-G-A-1GCTC13AGCT16GAGT22AT8CA1TC40AG1AT2CA8AC3GT33G-G-G-G-G-A-T-C-3A-4TA1GA5GA14-G-G-T1CG1CG1ATTG1CGTG18AG2AG5TCAT3AG10CA34AG5AG8AC11CT90AG1GA5AGAG46TA2AG5AT5CT3GA4CT52CGCT5TG6AG5A-C-C-A-T-T-G-A-G-C-C-A-2CG4CA6ATGA6TG4-A-G-C5-A-A-T1TA2GAAT2GA9AG2GA1CA16GA3CG7CA6AG4AGGT1AC14CT1CT15GA2GA2GC3CT2GA1GA1ATAG3AC2AC5TA2GA5TC9TC7ATGC26AC5AG47GA6GA4AG1AC16ACAC5ACCA10TC82GA9CT7TA1AG6AG4GA22AC1AT6TA33-A-A-AGA4-T-C-C4AC2TG1TG2CG16TGAT1GA3CT4G-A-T-1TA7GA4AG3AC21AG2AC1GA1TA7CA9CA3GA1GA4AGAC6CAAG11-G-A-A1GT3GACA7GAAT6AG1CA29TC40AT4GAGC4AG3TACA1TA1GT1-CAT2CG1ATCT2CT1AGAT3-T-G1TATG4T-G-3TG1CG1A-6GA2AC1AG1TA3-A-G-T-G-A-C2CA4TCAC8TC29AGGA1GA29TCCA19GA14AG23GT1CA2A-C-1GCGA3GAGT2A-C-A-G-1ATACTC4CT15GA3AG6AG30CT9GA5AG65AGCGCA9AT14CT4GA26AC3CA46AG12CT10GT11GA32AC2AG15GA16GA7GAAG26CT17CT9AG14AGTC14GA1AT5AG1TAAC1CG6GA1CTAC1TCTATC3TC6CG7TC1CG20AG1ATAT4TC2CTACAC3CA4GA3GT4GA8GA43AG16GA5TA4CT11CT6AT8TA1AG14AGAG20AG37CT22GA1TC5GATC29CTCA36GAATCTAC15TC4AG12TA7AC94AC18GC4GA2AG41AC16TC22AG8TG3CT4AG2AGTC9-T-A-T-T-C-G-C-C-A-C-A-T-A-C-C-T-A-G-A18AG5CA33CAAG4AGAT2GT2AG4GC2GAAC16GACG2AG1AG5GC11GA12TC9TC7GA31AG3AC15TC43AC9GA5GA11CT7GC4TG44TC5TC1TC7AG9CT15GA5AC24GA24AGAGCT5TACT6TAGC14TA18TG9GA1GA5AG19AC16AG19GT3AC1CG8GA6AGTA5AG30AG3AC5ACATAG18GA10CT1AG5TGTC1GA15GT22AG1G-G-G-A-G-G-C-G-T-G-A-C-11-T22GC21CT3TC5GT47GA6GA15
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+MK115095.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9137,9719,9115,49,9137,649,9681,0.0,9873,88.195,8039,plus,18AG41-A23CG9AG11GA3TA11AG20AG26CG12AC3AG10TCAGCGCT11AG15GA48CT2CT12AG1GATA13CT2GA5TA2AG15GT44AG5GATC12AG7AG4AG1TGGA13AG6CT7AG32GA5AG21A-A-2G-6C-A-G-CT33CA1AC2AG8AG8AGCG27AG10AG28AG18CT50AG1AGAG19GA11AG11TG13AGAG6TG19CG22AGGA8AGAG19CT24AG3AG36CT10AG10AG1GA16AG13GATC7TC14AG18AGGA2TC28AGGA2TC2AG5GT8TG10AG18AG14TC14CT14AGAG7AG6TC46CT41GT5CTTA8GA4AGGA10AT1AG14AT30AG10AG17AG6AG7AG13AG26AG20AG7TC9CT14AGAG9CT26GA4CA14TC1AGAG2AT4GA5GA20AC3ATGA3CA17GA10AG20AC1ACAG1ACTA7AG3AG1AGAG10AG39AG7AG1AG11AG2AG12AG4AGAG6AG32GA3CT4AG4TC3AG14AG11AG2AG10AT12AG16CT3CA2AG22CT2TC8AG29AG3AG43GA6AG11GA4AG2AG5AG3AG8AT8AG5AG1GA8TC11GA31AG19CA13AG5AT8TC1AGAGAG8CT2AG49AG5AG23TC5CTAG10AG23CT15GA5AG1AGGA28AGAG3AG61GC31AG15AG18AG6CT14AG2AG17AG1AG2AGAGAG4CT38TC4AG3AGAG17AG23CGAT9CA10AG27AGAG1AG2GA2AG4AG6CT5CT2TC4AG11AG22AG23GA42AGGA24AG3CTAG33GA13AGGCGA2AG24GAAG23AGAGGA13CT3AG26GA24GA2CATC4GACG11AG1AG22AG2TC8AG7AGAG4TCGA1AG2AG23AG11AG3AG5CT17AG7AG28AG10TC12AG10TC2AG12AG8AG1GA8GTGA1CT3AG17TA6TCAT16GA4AG7CA6CT19AG4CT1AGCA12GA17CA3AGAGGA21AC1GA19GA16CT10AG5AGAG1TC2CT7AGAG2CA12AG5AG2AG29AGGC1AG7AG12CT5AG10AG8AT8AG16AGAG68GA6TC5AG5CG1TC60AG5AG7AG21AG4CT18GC28CT3AC1CT8GA22TC9AT21AG1CTAG4AG4AG11AG2AG3AGAG1GA9AG5AG1TA14TC32TA28AG48TC18AG24AG10AG35CT14TA18AG22GA1AT31AG39TC33CA52AG21CA21CT2AG5AGAG7CAAG1AG4AGGT4CT9CT9AC1AC6AG2CT22TC2AG4AT2AT5AG7AC8AGAG32AG2CT8AC46GACA2GA17CT8TC5TC11AC11GA2TG3AT10TC1GT6GC17GA23CT15TC2AG21GA2GT15CT8AG3TC1AG8CT12TC6GA6AG7AG1AG7TC14TC7CT5AG2AG7GA12GA11AGCACTAT5TC3AG7AG3TC19AG13AGGA2AG16CTCT12TC4CT2TC2-T10AG6AG9GA3AG1ACAG3TC22AG16AGCATC13AG14AG4TAGA10AC16CAGA24CT4CT2GC5GC13CT35TCCA3CG1GA8AC9GTGT5CT2GA11TG9TC3TAGC1CTTA2GCAC5CT10AGGC13GACT20AG3TC6TA1AC10AG6TA10AGGA24AC3GT27AG5C-G-3A-C-C-A-G-G-A-4TA8AC4AG5AG-G-G-G-G-T-G-G-A-G-A-T-G5TC1TA2TC5AG4AGGT7AC8CT1-C-A-G1CA2CA4AG17AG9AG5AG8TC36AG1GT6AGATGA14AC2CA25GA6GA7CT3AG1AT14CAAT29GA28AGAG23GA3CT18CG6TG9G-A-A-2AG2TGC-T-A-3TGGACTCA4CT1ACTC4CG1TA4TCAGAGTG1AGT-A-C-T-2ATTG5A-T-G-A-C-3AGGA7AG21GA3CG4GA1AC7AG7ACCAAG6CT5CT4CT12GA2GA11G-2AT1T-A-G-T-G-G-A-A-7ACGA2A-A-A-4GA1AT3TC2AG24AG40TA13AG16GA5ATGA6ACAG6AG8GCAC5GC28AG32CT1GA2CT21AG15CT4CT2TA2AG31TC1AC7AG25TC10GA2-G-A-A-T-C-C4AC2CG1TG7AG4GA6TGAT2GC2CT2AGCA1TA7GA4AG8GA17GAAGAC1GA1TA1AG4GA18TC2TGAC7AG4AC5-G-G-A2GT12GA7TG12AGAG9GA2AT2GA1TC3TC12AG3AGAG18AT7GA16AG1ATAT5AG5AG2A-T-G-7TAAGAGTG1ACGA4GATC6TGCG2AG1AGGA3TA5AC30TA8GA5AG3GA22CAAGAT2GA35GACT2GATC7AG2AGA-G-A-1CTA-A-C-5TC1GATC5TGAT1ACAG3CT6GA3AG2AG12AG8AG30CA15AG2AG11CA1TG22AG13AG1AG3CA1TAAG7CG6AGAG6AG20AG8GC3GA52AG14AG40AGAG24GA8TG1AG14AG15AGAG6AG9AG20AGAC6CT1AGAG4TC5AG3C-C-C-1A-G-A-T-A-G-4GA6AG2TAAC6AG2CA1AC3TC5AG2AT1CG3AG3AC1AG7GA7TC3GAAG1ATCT4TC1TCATAC10CG4AG2GA5AG6CA13CA5AG1CA9GA1AG11AG5AG4GA4TA3CA1GT5AG1AG10AT17AG8AG2AG17AG2AG4GT24AG4CT8GA2AG2GT7TA11AC22AG3CT8GA4AG6AG8GA2CG5CTGTAC8CA1TCAG3TC3AG5CT4AG6CT13TG9TC32GAGA10AG8AGAG7AGAGAG2AGAG5AC2GC2GA7AG9GA7AG10AC13AT14CTAG7AC14AGAG9AG1AG11TG5AG3GCCT1TG11TG11CG1CA16AG4AGAGGACT13AG3AGAG5TG5GA3GTCATGCTAGGT1GACT1AG8GA1CTAG3AGAG13AG4A-G-G-C-C-A-G-T-A-A-G-A-A-A-G-C-C-A-12AGCA2AG3AGAG19AG4GA10CA1TC31AC1GTTG6CG12CG4AG2AGA-A-A-5AG13GC18GA14AG1GC4CG5AC34TA9TC5AC13CT15CA5AC22CT1GA16AG7AG7TA7TAGCTC3AG9TA18TG9GA12GA1GATA11AC1TA8ACGA3CT1ATAG1AG7AG1AG2AG2AT3GCACAGCG1CG8AG2GACG61TC1AT4GA10CTTCAG2AC2TG3TC2AG13AG11A-13AG3AG4AT22GC21CT10AG30AG20AG42ATTC46
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+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,9027,371,9347,622,9625,0.0,10818,92.279,8330,plus,27AGAGAGTA1T-2A-1CA1G-T-G-G-CA2CGCAGA1AGCGAG2TA1T-3C-3GA9GA29AG35G-A-A-4TA24GA23AG14AG8TCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG34TC64CG39CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C8TC2ACTCGA10AG14AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG5GA5GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA18CA4GA29AG5CT50CT3CT14GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC1AT54GA16CT3AC16AC35AG4GA2AG15TA8CA35TC11AC14TG3AT10TC7AGTC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC13GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACT6TGCT59GT5AT21TC12AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TCAGAG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG4GAAGAC6AGAG4AG7GA9CT17GA2GA11GA6AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC2GA32AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT3GA-A-A-T20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T1GA1AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG5AG42GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT14TC6CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA23AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT13GA4GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,542,8815,9347,1,540,3.18e-176,616,90.221,489,plus,14TC8ACAG18CT6GA5AC24GA26CT21GA5TC1TA15GT5-A-G-A-G-A-A-G-T-T6GA5TCCA12AC1TA14AGCT12GAGA4GT8AG1AG6AG3AGTA5AG40ACAT14AT3AGGA11TC6TG4A-10TC16G-6TC39GC18GT2CT8ACGT87
+MK115490.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9347,9719,28,91,118,622,649,0.002,42.5,100.000,28,plus,28
+MK115576.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9266,9719,9048,269,9266,600,9625,0.0,10863,92.352,8356,plus,5TC2GTGT2AGCTTC2AT1ATTGCGCA23C-TA1TA2TG1AC2A-2G-1TACG1CGTACA2TG4T-C-T-1TC2C-13GA29AG35G-A-A-4TA24GA23AG14AG8GCCG44GA10TA31TC2CA5CT23GA2AC58AG8TA4GA8GATC12AG12CG2GA2CA22GC3GA31GA8A-G-T-15-ATG7GC2AT3-G-T15CT12CA23CG2CA43AG5CT14CG86TC17AG33TG99CG5CT33CT18TC22GA17TC8TC4AG47GA4TC7TC57TG4TC29AG8AG2AT8GA20AG5GA2GA5AC8AG32-A-A-C11ACTCGA25AG49TC5AG54TC11CT5AT26AG12CT4AG14CT2CT49TC5AT8TC7TC16AG1GT18CT2GATA9AGAG13GA13GC19TC1TA2AG6TC54AG65CT18CT21AG47CA7TC2CT17TC8AG101AG14AG50TC53CT20TC29TC60AG11AG4AC34CT3TC20GA3GC13GT71GA11TC80AG17AG83GA18AG1AG50AG5AG21GC37GA20GA3GA43GA2AG3TC3GA52GA13CGAC1TA2AC2GA107AG5GA3GA28AG13GA3AG2TC8AG11GA9GA7CT35CT32AG32TC23TC2AG2AG11CA14CT3GA1CT14GA3AG2TA7GT14AG46CT31AG29AC1GA23GA29AG5CT50CT3CT8AG5GA6GA10CT25AT2CA36GA10TCAC1AG2CA46AT9GA20TC36CT7GA65GA20CT5CTCT1GA3CT7GA26AT21AG2AGAC1GATC5AG18AG2GA17CA38CT122TC23TC15CA19GA51GA28TC44TC17GA11AG17CA60CA21CT8AGAG4AG3AGAG30AC56GA16CT3AC16AC35AG4GA2AG15TA6AG1CA35TC11AC14TG3AT10TC8TC38CA21AGAC8CT9GA1GAAG1GT12AG10GC25GA3AC30TC14TC16AG14GT18CACTGT17AG26CT6AG10GA13CTCT20TC2-T7CA26AG2GATCGT1CG55CT21CG7TC2CT46AC56CA3AGGAGA10GC6AC25TC6TC7CA1GA1ACCA4CT11GC4AG8GACT22AT7GATA1AC28AG2GAGA21AC3GT36GA2TACAATGAGTAC2AC1-C4CG-G2CA-T1CGTGTGAG23GT41GC23AG5AG7AC21GA15AGCACTCA6CT59GT5AT34AG26GA6AG53CG6TG6AG2CT1-G-A-A5TA15CT5TC1AG1-A2GAGT2AT1G-4CA1GA3AG1-G-A-G2GA1GA20CG5AGAC6AGAG4AG7GA9CT17GA2GA18AC3AC2TC4CAAG4TC2AG57TC38GA5GTGA6AC10TA12AC35AG9GA11AG15TC30ATAC9AG25TG5GCGAAC1CT2AG2CG33TGGA5TA4CG1CA1-C-C-A-G-A-G9AG8CTTGAT1GA3CT4G-C-C-1TA7GA4AG18CA8AGAC1GACA9TC12GA3TC1GAAGAC7AG8AT2-G-A-A1GT20TG2CA24AG3TC3TC1CG27TC6AT7GA18-T-T-T13-G-T-A3-A-A2-G-T-C-A3GACATC2CT3TGTG1GAAG2GAAC1ACCA5AC20GA10GT6AGGA31TC2AT3AC29TC1AG6GATC15CT1CGGC1GA1-A-A-T3AT1TC4CT26AG12GA35GA22GA21AG30GT46GC3GA16AG5GA1TAGA20AG5AG14AG17AG48GA23CA12GT6AG44CT30AG1TA9GA2AC3TC18AC21GAAG1ATCT4TC2AT11AG1GAGT4GA8GA29GA41AT11CT29AC3AG29GT7AG51GA31CA17AG17ACGA18TC10TA10CT21CATG2GA33AG36AGTC7CT9GA6GA10TG6GA7GA7AG7AGTC6TC9CA42AG14CA3TG11CG25GACTAT3TC5AG5GT22GT1GAGT10GA23AG16ATGA12TC17GA10GA33AC3CT8GA11AG5CGA-G-T-2AG16GC9GA19TA3AG1GC4CG1CA48TC9AG18CT6GA5AC24GA25AGCT21GA5TC1TA15GT5-A-G-A-T-A-A-G-A-T13CA12AC1TA14AGCT18GT8AG1AG6AG3AGTA5AG28AG11ACAT14AT3AGGA11TC6TG4A-27G-6TC39GC18GT2CT8ACGT87
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+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,9720,18,9686,1,9574,0.0,11694,92.407,8982,plus,21CA1ACAG9GT15GA4TC2TC8TC1TA11GA1GC1TG52TA4TC10GT8TG3GT7GA5TCGA10TC1AC1TA14AG6AT6GA5GT44GA7GA4GA27A-C-A-A-G-G-A-C-T-G-C-T-G-A-C-A-T-C-C-AT15AT7TG31G-46GC36AC42GA164-G1TG5GA12TC31AG25CT82GA3AC97CT3AG14GT20TC8TC7GA28AG16TG35GA19CT5GC26CT8GA19A-C-A-C-A-G-G-A-A-A-C-A-G-C-A-G-C-C-A-G-G-T-T-A-G-A-C-8AC6GACT26AG6CA1TC89AG50TC11TC75CG1AG20CT76CG11GA27CT41GA8TC93AT70CT20AG41GA8AC5AG29CA12AGGC1GA16GA11AG12GACT27GA5TC1TC5AG99AG12CT4AG20CT24C-C-A-13TG8TC2TG2AT16TC7AG8AG17T-C-C-7GA9AGAG46GA26GA23CA4AG3AG73CT117TC8AG101AG14AG119GA69TC38AG37CT86TC22AT5CA2GA9AC2GA26AG29AG6GA13AG19AG7TC4TC2CA17AG26GT48AG1CA32AGCT7AG5AG32GA4AG21GA24GA4GA18TC19GA26GA51GC4AC10TA52GACT55GA8GA19AG1TC11GA3AG77CT2CT14AG47TC29AG6ATAT22GA1CT21TA10TC33CT19AG35CT5GA24AC21GA12AG5GA20CT59TC21TC19GT107GA23AG8GA27TC26AG49CT11GA20CT5CT41AT21AG2AGAC8AG21GA17CA203CA5CT6CT15TC40GA28TC26TA126CA30AG9AG23TA7ACAC8AG27GA1AG10CT61GA50CA26CT8TC11AC14TG3AT19TC47GA37GT9CT13AC3GA2AG5AG47TC14TC24GA27AT9AG11TC19AG14GA33TC7TC2-T17AG16AG3TC40GA34GAGA13CA3TC11AG2CT25CT8GC43CA6CA3AGGA11GC6GC1CT5CT24TC7TA2AC5TG14CT11GACT4CA26CA31GA24AC3GT27AG5G-G-G-G-G-A-T-C-3A-4TA10-T-G-T-G-G-A-G-A-T-G-G-G8GT6TC1TA10AG16AG10CAA-A-C-10TC29AG7AC37AGGA66GA5AGAGAT21TC6GA5AG22AG27TC16GA5TC13CG1CT4TG3-A-C-T-G-A-T-T-T-G-A-A-G-A-A-T-G-A-T10CA3GT5TC2AG1-G-A-A-T-G3CA1-G-G1CGCA2TG2AG-A-G2GA15TA3CT1GAAGAC3GAAG8AG4AGAT1-C5G-9CT8GA11GA4CA6GA1GT4AC2ACGC1A-T-A-A-G-A-G-T-A-A-T-A-A-T-A-T-T-A-4T-T-C-2GA3AG1TC6CT11TC8AG71GA6GA6ACAG14GA23GA14TA53CA13AG4AGGT10AG28AG2TCGAAC1AT5AG40TA2AC1CG3-C-C-A-G-A-G19TGAT1GA3CT4GA1C-A-T-7GA1CT2AG20CTTACG9CA4CAAT21GAAGAC6GA2AG9AGGAGA1AT12GA7TG1CACA20GAGA6TC16AG30CA19ATATG-G-A-G-A-C-4GA1GT1TC5C-T-C-3TC2GA2AG7GA1T-A-G-T-G-C-T-A-C-T-A-T-C-A-4AG2TG2T-5TC2TA5AC4AC3TC1AG5GAGA12TA8GA33AGAT11CA4TC6CT18GATC12CT4AG2CAGC2CT1GA1AT18TG9AT76GA27GA8-A-G-T1AGCG1TA1GA6CT46GC3GA24TA21AG20AG66GA24GA45CT9AG14AG26AC1AG9AC1TC1TC18AC9GA20TC2AT5CA13GA14AG6AC21CA25GA10CT18AT14AG32AG37CT14CT4TC5CT4GA1TC29CA4GA31GAGT2CG14TC3AG6TA6TA3CT57GA40TC8CTGT6GA9AG8CT23CT11CT45AG2TG5AG18TG3TC7CG25GACT22AG13AGGTCG1AGTA11GA20AC5G-A-G-C-C-A-G-C-A-G-C-A-15GA30GA3CT24CG2AG37AG25GC33AG2GA61CA2AG9GT15GA4TC2TC8TC1TA11GA1GC1TG21AG30TA4TC10GT12GA14GA10TC1AC1TA14AG6AT12GT44GA7GA32AT4GA11C-C-A-C-A-A-G-A-A-C-T-G-C-T-G-A-C-A-A-7TG31G-46GC36AC31
+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,663,9,671,9077,9719,0.0,789,91.855,609,plus,3TG2CGTA22CA2AG9GT15GA4TC2TC8TC1TA11GA1GC1TG21AG30TA4TC10GT12GA14GA10TC1AC1TA14AG6AT12GT44GA7GA32A-C-A-A-G-G-A-C-T-G-C-T-G-A-C-A-T-C-C-AT15AT7TG31G-46GC36AC42GA133
+OQ092466,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9686,9719,509,9178,9686,1,489,3.68e-161,566,89.194,454,plus,21CA1ACAG9GT15GA4TC2TC8TC1TA11GA1GC1TG52TA4TC10GT8TG3GT7GA5TCGA10TC1AC1TA14AG6AT6GA5GT44GA7GA4GA27AT4GA11C-C-A-C-A-A-G-A-A-C-T-G-C-T-G-A-C-A-A-7TG31G-46GC36AC31
+OQ092463,Ref.B.TH.90.BK132.AY173951,0,9605,8996,8952,688,9605,1,8896,0.0,10987,93.186,8342,plus,4TC12GAAG12AC45-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T-G-A-G6-A-A-A-A48GA15GC16AG1GA10AC24AG36GA2GA20GA2AG9AG17TC3AG13TACG26AG16GA5AGCT12GA14TG26TG14GA20AGAG17GA6G-2A-C-5C-C-A-G-A-C-8CTCT23GA2CT2CG68GA125AG144AC19AG8CT2TC21CT38CT26TC31AG14AG3TGGCTCAT31AC2AG14AG11CT20AG53AT2TC8AG14AG17AG4CA1CT3GC17GA9CT8GA7AT15CT17TC5TCACAG18AG2AG1GA11AG9AG23CT5GA44GA35AG13AC21GA30CA1GAGA13GA9GA2TG6GA74AG23CA4CA63GA54GA35CT4AG5AGAC22CT107CT23GA32TC77GA53AG11GA8AG56GA20TG4TC79AT124TG3TC1AG16AG21CT38AT32GA9TC4AG5GA5TC80AG26GA28GA3AG11GA30CA26AT7CT11GATA61GA8GA17AG23GA3CT23AG37GA2TC16GA12CA47AG23AG20GA5AG2TC17TC14TG2AG38TG38TC11GA23TC32CT66TA4TC1AG12AG9AC7CA5AC26AG63TC25TA2CG5GA20GA68CT3TC7GA17AG29GA11CT44GA54AC30CA32TC9AG8CT5CT32TC38GA20CT35GA22ATCT83AG30CA67CG140GAGA33AG6GA16GT1TG4AGGA9GC1CA2TC26TA2CT11GA2TG2GT1AGAC10CAAG32CA5CT8GA20-G6G-7GA15TA25GT30CT22GA21TA48GA9TG9AG28AG53GA65CT6CA11AG1CA9CT12CAAT5AG2TC17AG7CT36AG10AG18CT1TC2AT2GAGA18AG15TC33GA3TG7CA1TA4TC8GACA1GA28TC2CA5GC50AC3AG3AC41CT10ACCT5GC6CT2CG22AGTG31CA31AG12AT15GT30CT2GA2GA14AG7T-T-G-16CTGCAT13GA8CTTA8AG7AT47TC13AG23GA6GA17TC49GT12GA8CY7AC4GA6TC42CT23CT17GA9AG3A-1AG1TG1A-C-A-C-C-5CT4GA6G-A-A-T-A-C-C-A-C-C-C-C-7AG1T-G-C-T-A-G-T-A-G-2GA5GT1AGTA2GC1GA10AG30CA4AGGA5AT27GA2CT16GA16TC35AC53AG26CTAG12AG4TACAAC10CA13AG21GA9GA11AG3TC26AG22CTTA28TG5GA2TATC12CA5TC6CT6AT7AG5TA3CA15AG2CT2TA2TA1GA9CACA19AG12AC4AG2AGAC2GA19AGCA6TG7GA4GA10G-G-G-2TC5GT6AG7TGCA1CA28CT5AG5AT20AT7AT2TA26GAAGGC3-G-A2TGTACATA2-A-C2AT3T-3TGCA2A-T-G-1CA1CA24GA6AG5CA40TCAG6TACA4AG3TCTA1AC8CT12AT13TA2GT2ACAC1TA4AG2GC4AGCACG2CT2GA2TC10AG14AG19TC38AG10CT54AG50AG1AG22AT34TC77CT1GA38AG26TC42AT7ATCG8GA35GA11AG4GA8TC44AT3TC2GC46GC41CA18GA5GA4GA10CT6AG40CT27AC1AG8GA29GC8CGAC6AG1CT15AT10CT7GA76GA11CGTC6GA17GA33AG10TC5TC5CT23CT3AG21CT1GTGAGT6TA15GC6AC37GA1TC13GTTG4T-2T-T-G-G-A-9AG17CA2GA2GA7ATG-C-A-17GA104-G-G-G12TC7GAGA29TC4CG4GC44TC13GAAC34CT29CT18AG1AC4ATTC32GA14TC23AG2GA6AT21TA12TA5AG15GA1AG4GAAG8TC11TG18CATA21TC8CT52GT75TG12
+OQ092463,Ref.B.TH.90.BK132.AY173951,0,9605,8996,576,38,613,8421,8996,0.0,756,95.833,552,plus,11GA11AC34CT29CT18AG6ATTC47TC23AG2GA6AT21TA12TA21GA1AG4GA9TC11TG18CATA30CT45TC6GT89TA98
+OQ092465,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9659,8890,8931,654,9563,1,8890,0.0,10476,91.278,8152,plus,18TA2CT13A-32T-TC11GTGAAG42CT32AT9TA1AT47GA26GA26AG16AG10AG19AG8GA2TC17GT5AG6AG17TC23CA30AT13AGCT19CA7TG8CT5GA49TC13AG3AG11AG2GA33TC2CT20GAGC2AC31AG2AG13CG3CT1GA39AG5CT8CT12CT4CT41AC29TC5GA17GA5TCGC16AG5AT11CT5AT5TA7CA16GCGA11AGTC2TC6AG7AG23AC5GA7AC2AC1AC5AG1GA8TC3AGCT7CT9GA6AG5GA2ACTCCTCT25AT6TC6GCCTCT2AG14GA6AGAG12AC2AC2AG5CT1AC6AG5AC2CT2CT5TCAT10AT2AG2AC4CGAGGC2AT4AT6AC3TC3ACGC1ATTG3AC16GA7AG14AT2AG12GATC5CG1CG3GC2C-C-A-12GA1GA1CT2TC2CT1GA1AG9AGGA1CT6GA5CT2CT14GA2TC5TC25GA21AG8CT11TC8GA22AGGA2CT17GA5AC8TC11AG9AT12CA15CT21TC40AG10GA20CACA1CA6AG9GA3GA2AG1TC18CT32GA1CA11GA47GA10CA1GC3CTTCTCGA4AC2CT8TC2AG4TC9TA8AG41AG5TC2CT11TC102GA7CT23GA32TC29AG38AG10GA117AG2CA116TC100GA16AG4TG3TC1AG14GA1AG42TC17GT42TC10AG5TC8TC14GA5GA29CT11GA4AG11GAAG7AG9GA11AG15AGGA33AG39AT19GATA13AG3GT55AG10TC3AG11TA14GA8GA15AG30CT6GA6CT1AG8AG1GA3AG8CA10CT81GA29TC11TG8CT5GA6TATA22AG1TC20CTTC4AG2TG5CA18TC10TC3CT20TG4AG20AC58AG12AG17CA5AC2CTCT73GA2AGGA34TG2TA27GT29GA37CT3TC7GA44AG2GA59TC35GA68TCGA15CATC2AG47AT27GA16AG14CT35GA8AG13AT3AT44GA45TC20CA64TG144GA8AC18AG5AG6AG8AG1GAGAAT3AG7GA11CA2TC1TC1AC6AG15TA20AT5GA3AG3CT3AT87GA9GA11GA9TC8CT56TA5TG32GA27CT2AG39AG34AC3CT53GA23CT8GA8AC2CTAG7GA17AT5AG53TC7TA9GA23CTCATC2AG2GA35TC13GA2TC5AG17TC6TACATA2TC2TC5GACA86GA3AC6CT16CT12GA9GT13ACCT5GCTA5CT27GA21TA7AGCT1CA23AG7AG18TG8GA32GA5TC12T-C-A-G-C-A-2TGG-T-T-5GA8CT29GACT3AG5AC3TC15TC8AG18AT1TC5TCCT21AGAC3TGAT2GATC17GT5TC26CT8AG3GA9GA12GA21GA10AT2GA8GA26TC5AG35GA13AGTG4ACCT3GAGA1GACACGATATTG3AG1CT3AGGA8CG2CGC-A-C-C-C-C-3TA1C-C-A-C-T-G-T-3T-2C-2GA4GT2TA2G-G-G-1A-G-G-6AG18AG5AT5CA2AG2GA25CT7GA2CT4AG11GA5AGCA4-A-C-A-A-G-C4GCGATC6GA24GA15AT7GA21GA17AC13CTAG6CAGA9TA22CT25GA51GA5AG20AGGA12AC12TG6AG2TA17AGTA25AG6CA1AC1GA3CTCTAT4AG6TG1TA11CACA24CT7ACAC6AG3GA6AG1TA9GA1GA1AG1GA2TG3AC3GA3AG11GAGAGA3-C-A-A5GA7TC3TCAG3AT25GA1AGACCT5AG3TC1AG15TC15TA2AC1AG4TA8CA1TA4TG-C-A-G4CA2GA1TGAG-C-A-C6GTGAGA1GA1AT3-A-G1CA1AT2-T5CT1CA24GA12CATG41GC4CGTCCA4AG5CT9CT8AGCT19T-11GAAT1CTAGCT1GCA-C-A-C-T-16TG7AG6AG48AG9AG56TA-C-A-A61AG14GA35GA32GA59GA29GA2AG26TC24GA17ATAC3GAAGCAATCG1GA6GA1TC17AG27AG2TG9CACT12TG27TA10GC4AG4ACAG24GA10GA17AG26GA26GA2TC7CT36TC7AG11CA18AC1AG11GA20GAAG9GAGT1CACG6GAAG1CT14TC7TACA5GA53AG6AG20GA11CGTC6GA5GC34AG10AG4CT11TC5CT17GA18GA2TG6GT1GACTATGT1GT6TA17AC16GA5GA7TA4AG21AT4TCGA3TG3AG3CA2AGACATAG20GA11GA1AT2AG25CT10CT19CT23CT8TC32GA5TC2TC8GA29TC2GA1CG4GT70TG21CA10CA27CACA30TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GAAG8TC5GA7AGTC3AG1GA3CA19CT5GA11CT4CT8AT10GA20
+OQ092465,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9659,8890,382,66,447,8509,8890,8.94e-130,462,92.147,352,plus,36TG21CA10CA27CACA30TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GAAG8TC5GA7AGTC3AG1GA3CA19CT5GA11CT4CT8AT10GA20
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,9788,1,9708,1,9719,0.0,11340,90.785,8886,plus,14TC8ACAG3GA21GA1TCCT16TCCT9GA36CA5TC13TA24TGCA2GT7GA5TCGACA11AC16AG13GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA30TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC7A-32TC6TC5TGAGGA39-A17-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T-G-A-G7T-75CTACAG43CA1GACT28AG5GA5TC11CT17GA2GA17AG2GA2AG5GA2CAGT1TC25AG4CT3TA1CA33AG7GA1GA11AG11GC20GC14GA14CA12AC1TC1AG2GACT35GC5AG15CG2CA35AG7TG11TC8AG12AT37TC87TG1AG11GT9GA4GA9CA1AGCA4GA34AC9GA7CG10CA11GA16CT15CA1TC29CT5CTGATC17AG60TC5GA11TG35GA29GA8AG8AG6TC41AG7AG33GA5CT6GC27AG12CACT1AG13CT11GA5TC1TCTA2TC1AG23GA76GA11CTGA6GA14CT49TC5AT6GA9TC7AG1CA31GA10AG40AG26CT20TA13AG11AG6GA95GA50AG5CT32AG40GA43AGCT15AG14AG5CT36AG16GA5TCGA3AC54TC29TC2TA69AG1GA26AC8CT1CT27CT14GT53TC2GA35TC20AG8GA27GA13AG14AG4AG7TC67CT24TG28TC23AG8CT23AG2CT11GACT16GA23GAGA12CA30GA50TC12CA51AT21GA14AG3AG14AG32GA1TC42TC1AG24GA9TC30AG11CT21CT13GA2AG14GA11TC23TC5AG30GA1CT1AG19CA7GT24CT11CT19AG66AC1GA11AGCT6GA24GA14CT53GA59AT44CT15AG10GA14TC5CT9TC40TA11GA15CT2AG8AG61GA8AG11CT5CT2GA38AT21AG2AGAC1GATC5AG3TC17GA5AG11CA25AG4AG55AT36GA56AG28CT63GA28TC77TC2CT72GA14TC6CT2AG1AT3AG9AG1AGAGTA5GT21ACTC51AG25TA52GA3GA9AC17CA29TC5TC11GC14TG13GATCGA7TC30CA16GA12AG21GA2GT23GC50AG9TC11GA7AG11AG5AG1GA27AT5TC5AC2GA2AG2GA14AT62TC2-T12AG21AG3AC2TG15GA6TG14CA35GA17TC14CT28AC5GC49TCCA3AGGAGA4GC12TC7CT24TC2GA4TA2GCAC5CT13CT11GA2CA22TC6CA44AT2GA1GT6AC3GT15TC5AC14GA2TACA-T1GTGC2GC1AC2AG1CGAGGACG1CTTG-G-G8GT8TA13AG17CT5GA2CA17CT20AG15TC19CT64GA19AGAT15GT5TC12AG20CG23GC10AG31CG6TG6-G-A-T-T-T-G-A-A-G4CA5TA-T-A-C2GA1GA3-G-T-A-G-C-G-G-G-A-G-A-A-T-G-A-T-A3CG1-G1CA2AG3AG21GA3AGTC4AGAC3GA8AGAT10CTGA4CT17GA2GA11GA6GCT-A-C-T-A-A-T-A-G-G-A-C-T-A-A-11GA5TC12TC14AG71GA3GAGAATGA4AGGAAC17TC5GC15CA17CT21TC7GA19GA14AG5ATAC3AT5AG6TC21AG2TCGAAC1AT5TGCA18TC1GA14GA3CA2AC1AG3GC-C-A-G-A-G-A14CA3TGAT1GA3CT4GA1A-A-T-7GA4AG2GAAC7GT4TA1CA1GT1AG2AGGAAG2GA1CA4GA1GA9CA1ACGA8AGAC6CAAGCAAG1GA6CG-G-A-A-A-T-A2GAGA1CA5GACTAC3GA22TA6AGCT2TC5CG30CT2CTAT2TA2GCCAGATC6GACTGA1GT2CT3ATAT1GAGA2CG1GA6CG2AC2CATAAGCGTG1GCGAGAGA3TC1TC2CA3TA1-G-T-G3ACTA5AC4AC16TA9GTAG6GA34AT3GC52CT1GA2AG2C-A-2A-A-A-T-G-G-T-G-G-C-G-A-G-A-A-T-G-G-G-A-C-C-C-A-G-A-T-T-G-G-C-G-A-G-4TA1AT2CG22GA32CT23GA9AG19AG32AGAGCG1TA1CA53GC8AG19TA21AG12CT7AG17AG32AG5TC34GA15AG39AG32AT8AC1AG6GAGAGTAC3TC18GC9GA7TC3GAAG7TC2AT11CG7GA5AG32GA12GA1CT15GA10CT18AT22TC2AG26GA11AG20CT11AG2CT7GA7GA2TC27CTCA2CA33GAGTATTCCG14TC3AG5CT6AGTA3CT8TC4TG14TA26CT1GA37GA26GA38TC5TC5TC1TC3TC3TG7GT5AG9AG9CT1AG5AG2AGTC12CTTCTGAC10CG3GA14AG6GACT23GT9-G-T-A-G-T-G3GTGT6GCTC1GA12AG6GA3AG1T-A-A-G-C-C-A-G-A-A-G-A-13AG2GA7GA15TC4GA3TC4CA3CA18TC6TC7AC2TGAT2TC20AG11CT10GC6AG28GC4CG7CT42TC9AG3GA21GA1TCCT16TCCT9GA25AG10CA5TC13TA25CA2GA14GACA11AC16AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-9
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,635,1,634,9086,9719,0.0,755,91.811,583,plus,14TC9AG3GA21GA1TCCT16TCCT9GA25AG10CA5TC13TA25CA2GA14GACA11AC16AG16AG2GT10AG6CG3AGTA5AG11AG9CT1GA4AG25TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-9
+OQ092462,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9714,9719,637,9075,9710,1,636,0.0,749,91.366,582,plus,14TC8ACAG3GA21GA1TCCT16TCCT9GA36CA5TC13TA24TGCA2GT7GA5TCGACA11AC16AG13GA2AG2GT10AG6CG3AGTA5AG11AG9CT1GA30TC1AT3AGGA10GT4TC2TG31-G5TC4TC33ATGC40TC15AT20CT6AG1GA96TCTC1GT5TC11A-11
+OQ092464,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9556,8890,8917,592,9460,1,8890,0.0,10536,91.533,8162,plus,18TA2CT45T-TC11GTGAAG42CT27-A-C-T-G-G-T-G-A-G-T-A-C-G-C-C-A-A-T-T46GA34GA35AG10AG28GA20GT5AG6AG17TC13GA3GT5CA30AT13AGCT24CA2TG8CT5GA47AG19AG11AG2GA34AC22GAGC2AC31AG2AG13CG3CT1GA27GACT10AG5CT21CT4CT23TC17AC29TC5GA17GA5TCGC16AG5AT11CT5AT5TA7CA16GCGA11AGTC2TC6AG7AG23AC5GA7AC2AC1AC5AG1GA12AGCT7CT9GA6AG5GA2AC1CTCT25AT6TC6GCCTCT2AG14GA6AGAG12AC2AC2AG5CT1AC6AG5AC5CT5TCAT10AT2AG2AC4CGAGGC2AT4AT6AC3TC3ACGC1ATTG3AC16GA7AG14AT2AG12GATC5CG1CG3G-T-A-1CTAG12GA1GA1CT2-C7A-9AGGA1CT6GA5CT2CT14GA2TC5TC14TC5GA4GA21AG8CT11TC8GA22AGGA2CT17GA5AC8TC11AG9AT34AG15TC25AG3AC10AG10GA20CACA1CA6AG9GA3GA2AG1TC51GA1CA3AG7GA47GA10CA1GC3CTTC1GA4AC2CT8TC2AG4TC18AG35AG11TC2CT11TC102GA7CT23GA32TC29AG38AG10GA117AG2CA116TC100GA16AG8TC1AG14GA1AG42TC17AT59TC23GA5GA29CT16AG12AG17GA11AG3AG11AGGA24GA8AG39AT15TC22GT55AG10TC3AG11TA23GA15AG30CT6GA4GA1CT1AG8AG1GA3AG19CT81GA23GA17TG8CT5GA6TATA22AG22CTTC4AG2TG24TC10TC3CT20TG4AG20AC20TC37AG12AG17CA2GA2AC2CTCT73GA2AGGA34CG2TA27GT13CT15GA37CT3TC7GA44AG62TC35GA15CA53GA15CATC2AG14CT60GA16AG50GA8AG13AT3CT44GA2GA42TC20CA37CT26TG144GA8AC18AG5AG15AG1GAGAAT11GA11CA2TC26TA8GA11GT5GA3AG3CT3AT68GA1AG16GA9GA1TC19TC8CT46AG9TA5CG54GA8AG39AG34AC3CT53GA23CT8GA11CTAG7GA17AT5AG53TC7TA9GA4GA18CT1TC2AG2GA35TC13GA2TC5AG17TC6TACATA2TC2TC5GACA86GA6CA3CT16CT12GA9GT13ACCT7CA3GTCT23CT1AGTC22TA1TC5AG2CA23AG5GA1AG18TG38TC2GA5TC2AG8A-T-C-A-G-C-3TG5GA9TGGA27GA4AG5AC3TC15TC8AG18AT1TC5TCCT21AGAC3TGAT3TC23TC26CT8AG3GA9GA12GA21GA10AT2GA8GA26TC41GA13AGTG4ACCT2CT5TGATCTCG1CA1AGGC3C-A-A-8CA5CGC-A-C-T-A-C-3TA1GTCA1GA4AG1GA10GA1G-A-G-2AG18AG5AT8AG2GA5GA19CT10CT4AG11GA9AG3TA2TC4GCGATC6GA24GA23GA21GA17AC13CT8GA15TC16CT25GA51GAGA4AG20AGGA25TG9TA17AGTA25AG6CA1AC5CTCTAT11TG13CACA24CT7ACAC6AG3GA6AG1TA9GA1CA1AG4TG3AC3GA3AG11GAGAGA-A-A-T-C-A-A5GA7TC3TCAGCA2AT22GA2GA1AGACCT5AG3TC1AG15TC18AC1AG4TA8CA1TA4TG-C-A-G4CA2GA1TGAG-C-A-C6GTGA2GA1ATAG2TACGAT3GAACCT5CT1CA24GA12CATG39TC1GC4TGACCA4AG5CT9CT9CT2AT16G-A-A-A-9AG1CAAT1CTAG-T26AG55AG9AG55-A-A-C10GA52AG14GA7TA34CT25GA59GA29GA2AG26TC24GA22GA2ATCG1GA6GA1TC15GC1AG7GA19AG2TG9CA10AG2TG38GC4AG4ACAG24GA10GA17AG26GA29TC7CT36TC7AG11CA18AC1AG32GAAG9GAGT1CACG6GAAG1CT9AG4TC7TACA5GA53AG6AG32CGTC12GC34AG10AG4CT17CT17GA18GA2TG6GT1GACT1GT1GT6TA17AC22GA7TA13TC11GAAT4TCGA3TG3AG3CA5AG20GA-C-T-G-A-G-C-C-A-G-C-A-A30CT10CT19CT23CT8TC26TG5GA5TC2TC8GA32GA6GT50CT7AG11TG21CA10CA27CACA15GA14TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GA9TC5GA7AGTC3AG1GA3CA19CT5GA16CT8AT10GA20
+OQ092464,Ref.28_BF.BR.99.BREPM12817.DQ085874,0,9556,8890,380,6,385,8511,8890,4.64e-128,456,91.842,349,plus,14CT7AG11TG21CA10CA27CACA15GA14TC20AG8GT5TAAC8GA26TC18TA34GA1AG4GA9TC5GA7AGTC3AG1GA3CA19CT5GA16CT8AT10GA20
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,9751,61,9718,1,9719,0.0,11550,91.734,8945,plus,14TC6CA1ACAG9AT15GA30GA9TC16CTTC9TC1AG16TA24-G-A-A-G-T-T-A-G-A-A-G-ATA1-C-C-A-A-C-A10TC1GC1TA5CT7GTAG3AG2AT6GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA185TC5AG6TGAGGA8AG45-G-A-G-G-C-G-A-G-G-G-G-C-G-G-C-G-A-C-T-G-G-T13TA72ACAG27AG5AG3CA4CT12CA49TGCT4GA11GC30GT1TC21TC48AG7GA25GC2AG18CA17G-4-ATA18AC4AC1GACT33CA23CG1TCTA35AG28AG12AT53AG1AG2TG38TC27TG13GT9GA13AG43AC28CA25TA2CT17TC5GA30GATC3TC8TC4AG54GA14ATAT7AG5GA17TC3CT13AG2TC29AG8AG38GA2GA5AC5CT2AG42-G-C-T2TCGA28TC10CTAT32TC1TC3AC20AG26AG5GA60CT7GA25AG38TC5AT16TC12GA28GA9AGAG34AG11GA50TA4AG3AG7AG21AG45GA91CT2TC20TC8AG101AG14AG50TC14TC17GA65GA5TC35AG14CA9AG11AG16CT22CT92GAGA2AC5AG59GA20AG23AG19AG100AGAT15TC20CA14AG26TCGC4AG32GA5TC18GA12CA30GA17GA24AT1GA6CT11CA17AG1TC26AG26GA35GA30GA3TC27CT12TC1AG2TC8AG26CG26TG11CT17AG20AG26TC23TC2AG2AG4GA2CT3CA18GA16GA6CA7AT11CT44AG20GA18CT26AC1GA19GA24GA14CT63TG13GAAG20AGCA15TA7GA3CT5CT39AG2AG54CT18CT29GA15AG61GA8AG11CT5CT6CT22GA3GA7AT2TC18AG5GA6AG21GA17TA29CAAG40AG8GT99AG40GA8CT42GA1CT26TC68GA14AG69CA20AGCT4CT3AGAG8AG7GT10CT12AC1CT26TC5GA8AT8AG6GA40CT30GA6AG5TG18CA24CT4TC5TC11GC14TG3AT2GT6GATCTA11CAAG13AG28GA13TC12GA10GT23GC4TC39AG15TC1TC5GA23AG7GA27AT9AGAG6AG3TC1CT7CA19AG13TCTA31TC2-T12AG4AG16AG22GA57GA3CG46CT10AC52CG3CA3AG6GC13ATGT30TC6CTTA2GCTC4TG26GACT22AT7GATA1AC32GA5TC2CGAT5AG5AC3GT39T-C-A-G-G-2GT1A-T-T-G-2GA18C-A-C-C-A-T-5AG21AG22AC4CA16TC23AG15TC14AG16CTCA7GA41TC15CGCT5AT21TC12AG25CT24TC36TG6TG6AG2GT1-G-A-A5TA5CA2AC5AG6TCAG1T-3GA1ATCG1GT-A6GATA6AG23TCGACG6AC4AG1AGAG4AG1AGAC14CT5AT3GA7GA2GA10GTGA6AC3AC7TA5TC2AG6TC10CT22AT7AG41AT12GA4AG1AC23ACCA34AG9GA23TC18AG5GA9ATAC9AG31TC1AC1AT2AG15TC12TC14TA2-C-C-G-T3TCTATG1-G1-G4GA3CAAG4AT2TGAT1GA3CT2AG1GA1C-A-T-12AG23GT3AGAC1GA1CA3GA4ACGA5GA5GA3TC1GACGAC18-G-G-A2GT12GA7TG14AG16TC3TC13CG21CTAT5AC1GA18ATA-T-G-6AGCT3CT3AG1-A-C-T-G-A-A-G-G-G-T-C-A4CATC5TAAGAGTA2-T-G-A3CA5TC5GA25GTAG6GA22TC10AGAT2GA7AG22TC1AGTC20GATACTCA2GAA-G-G-4CT1CACGCT1TC8TC26TC44GA11GA32AG4GA12AGAGCGGACA1GA6AT46GC26GA36CT29AC44GA20TC2CA16AG44AG9AG20TC5AC10ATAC3TC18GC1AG21GCATCT4TC2AT43GA14GA5GA24GA10CT18AT7CA14TCAT1AG5GT15AG4GA41GA2AG2CT7GA1TC5GA1TC11AC16CT37GAGTGT1AG14TC3TG2GA14CT4AG23GA28GA24AG12GA26GA5CT20GT11TC5TC11TC45AG2AGTC1GT12TG6CA23AG6GACT32TA5CG2GA11GA2AG26C-C-A-G-C-T-11ATGA23TC17CA6CG3TC13ACTC20GA17AG8GT10GC33AG1GC4AG1GA6GA41TC6CA2AG9AT15GA30GA9TC15AGCTTC9TC1AG16TA25-A-A-G-A-T-A1-A-A-G-A-G-G-C-C-A-A-T-A10TC1GC1TA1TC3CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26AT3AG11CT1AG2TC2-G16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA166
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,636,59,675,9084,9719,0.0,705,88.994,566,plus,16TC6CA2AG9AT15GA30GA9TC15AGCTTC9TC1AG16TA23-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G-C-C-A2GA10TC1GC1TA5CT7GTAG3AG2AT7GACTAG6AC1AG2AG8AG3AGTA5AG10AC17AGAT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA166
+OQ092467,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9936,9719,636,9104,9720,1,636,0.0,699,88.836,565,plus,14TC6CA1ACAG9AT15GA30GA9TC16CTTC9TC1AG16TA24-G-A-A-G-T-T-A-G-A-A-G-ATA1-C-C-A-A-C-A10TC1GC1TA1TC3CT7GTAG3AG2AT6GAGACTAG6AC1AG2AG8AG3AGTA5AG10AC18AT26AT3AG11CT1AG2-C2TG16AG9GTCT9TC5AC33GC15CT6CT19AG1CT1GA168
diff --git a/tests/expected-results-large/errors.json b/tests/expected-results-large/errors.json
index c635e13..66b1327 100644
--- a/tests/expected-results-large/errors.json
+++ b/tests/expected-results-large/errors.json
@@ -59,18 +59,28 @@
             "sequence_name": "KX505501.1",
             "error": "LongDeletion",
             "message": "Query sequence contains a long deletion."
+        },
+        {
+            "sequence_name": "KX505501.1",
+            "error": "Scramble",
+            "message": "Sequence is plus-scrambled."
         }
     ],
     "MN691959": [
         {
             "sequence_name": "MN691959",
-            "error": "InternalStopInOrf",
-            "message": "Smaller ORF vpu at 5625-5871 contains an internal stop codon at 5688"
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
         },
         {
             "sequence_name": "MN691959",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF tat_exon2 at 7937-8030 contains an internal stop codon at 7982"
+            "message": "Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6124"
+        },
+        {
+            "sequence_name": "MN691959",
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
         }
     ],
     "MN692074": [
@@ -140,11 +150,6 @@
             "sequence_name": "MN692145",
             "error": "InsertionInOrf",
             "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-        },
-        {
-            "sequence_name": "MN692145",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
         }
     ],
     "MN090335": [
@@ -176,7 +181,7 @@
         {
             "sequence_name": "MN090335",
             "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
+            "message": "Sequence is minus-scrambled."
         },
         {
             "sequence_name": "MN090335",
@@ -210,6 +215,11 @@
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a missing splice donor site, --."
         },
+        {
+            "sequence_name": "MN090376",
+            "error": "Scramble",
+            "message": "Sequence is minus-scrambled."
+        },
         {
             "sequence_name": "MN090376",
             "error": "InternalInversion",
@@ -229,6 +239,16 @@
         }
     ],
     "MK115690.1": [
+        {
+            "sequence_name": "MK115690.1",
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
+        },
+        {
+            "sequence_name": "MK115690.1",
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 243"
+        },
         {
             "sequence_name": "MK115690.1",
             "error": "PackagingSignalDeletion",
@@ -238,11 +258,6 @@
             "sequence_name": "MK115690.1",
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a mutated splice donor site, G-."
-        },
-        {
-            "sequence_name": "MK115690.1",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
         }
     ],
     "MK115571.1": [
@@ -304,8 +319,23 @@
     "MK115030.1": [
         {
             "sequence_name": "MK115030.1",
-            "error": "DeletionInOrf",
-            "message": "ORF gag at 315-1857 can have maximum deletions 30, got 33"
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
+        },
+        {
+            "sequence_name": "MK115030.1",
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 270"
+        },
+        {
+            "sequence_name": "MK115030.1",
+            "error": "Scramble",
+            "message": "Sequence is minus-scrambled."
+        },
+        {
+            "sequence_name": "MK115030.1",
+            "error": "InternalInversion",
+            "message": "Sequence contains an internal inversion."
         }
     ],
     "MK115498.1": [
@@ -345,19 +375,19 @@
             "sequence_name": "MK115211.1",
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a missing splice donor site, --."
-        }
-    ],
-    "MK115158.1": [
-        {
-            "sequence_name": "MK115158.1",
-            "error": "FrameshiftInOrf",
-            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
         },
         {
-            "sequence_name": "MK115158.1",
-            "error": "InsertionInOrf",
-            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 252"
+            "sequence_name": "MK115211.1",
+            "error": "Scramble",
+            "message": "Sequence is minus-scrambled."
         },
+        {
+            "sequence_name": "MK115211.1",
+            "error": "InternalInversion",
+            "message": "Sequence contains an internal inversion."
+        }
+    ],
+    "MK115158.1": [
         {
             "sequence_name": "MK115158.1",
             "error": "PackagingSignalDeletion",
@@ -372,8 +402,13 @@
     "MK114705.1": [
         {
             "sequence_name": "MK114705.1",
-            "error": "InternalStopInOrf",
-            "message": "Smaller ORF nef at 8357-8972 contains an internal stop codon at 8789"
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 78 positions."
+        },
+        {
+            "sequence_name": "MK114705.1",
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF nef at 8796-9417 contains out of frame indels that impact 122 positions."
         }
     ],
     "MK114856.1": [
@@ -432,47 +467,57 @@
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "ORF gag at 315-1857 contains an internal stop codon at 360"
+            "message": "ORF gag at 789-2292 contains an internal stop codon at 834"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "ORF pol at 1619-4661 contains an internal stop codon at 1718"
+            "message": "ORF pol at 2084-5096 contains an internal stop codon at 2183"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "ORF env at 5788-8356 contains an internal stop codon at 5914"
+            "message": "ORF env at 6224-8795 contains an internal stop codon at 6350"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF vif at 4605-5184 contains an internal stop codon at 4644"
+            "message": "Smaller ORF vif at 5040-5619 contains an internal stop codon at 5079"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF vpr at 5123-5414 contains an internal stop codon at 5282"
+            "message": "Smaller ORF vpr at 5558-5850 contains an internal stop codon at 5717"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "DeletionInOrf",
-            "message": "Smaller ORF tat_exon1 at 5394-5609 can have maximum deletions 30, got 54"
+            "message": "Smaller ORF tat_exon1 at 5830-6045 can have maximum deletions 30, got 54"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF rev_exon2 at 7938-8214 contains an internal stop codon at 7995"
+            "message": "Smaller ORF rev_exon2 at 8377-8653 contains an internal stop codon at 8434"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF nef at 8357-8972 contains an internal stop codon at 8543"
+            "message": "Smaller ORF nef at 8796-9417 contains an internal stop codon at 8982"
         },
         {
             "sequence_name": "MK115009.1",
             "error": "APOBECHypermutationDetected",
-            "message": "Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 1.786005214078088e-40)."
+            "message": "Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 1.3731449337509935e-41)."
+        },
+        {
+            "sequence_name": "MK115009.1",
+            "error": "Scramble",
+            "message": "Sequence is minus-scrambled."
+        },
+        {
+            "sequence_name": "MK115009.1",
+            "error": "InternalInversion",
+            "message": "Sequence contains an internal inversion."
         }
     ],
     "MK115387.1": [
@@ -503,32 +548,17 @@
         {
             "sequence_name": "MK116110.1",
             "error": "InternalStopInOrf",
-            "message": "ORF gag at 789-2292 contains an internal stop codon at 849"
-        },
-        {
-            "sequence_name": "MK116110.1",
-            "error": "FrameshiftInOrf",
-            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 77 positions."
-        },
-        {
-            "sequence_name": "MK116110.1",
-            "error": "InsertionInOrf",
-            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
+            "message": "ORF gag at 140-1643 contains an internal stop codon at 194"
         },
         {
             "sequence_name": "MK116110.1",
             "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 93 deletions with max tolerance of 10 deletions."
+            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 22 deletions with max tolerance of 10 deletions."
         },
         {
             "sequence_name": "MK116110.1",
             "error": "MajorSpliceDonorSiteMutated",
-            "message": "Query sequence has a missing splice donor site, --."
-        },
-        {
-            "sequence_name": "MK116110.1",
-            "error": "InternalInversion",
-            "message": "Sequence contains an internal inversion."
+            "message": "Query sequence has a mutated splice donor site, CC."
         }
     ],
     "MK115527.1": [
@@ -575,18 +605,33 @@
     "MK115065.1": [
         {
             "sequence_name": "MK115065.1",
-            "error": "DeletionInOrf",
-            "message": "ORF gag at 315-1857 can have maximum deletions 30, got 33"
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
+        },
+        {
+            "sequence_name": "MK115065.1",
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 270"
         },
         {
             "sequence_name": "MK115065.1",
             "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 82 deletions with max tolerance of 10 deletions."
+            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 75 deletions with max tolerance of 10 deletions."
         },
         {
             "sequence_name": "MK115065.1",
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a missing splice donor site, --."
+        },
+        {
+            "sequence_name": "MK115065.1",
+            "error": "Scramble",
+            "message": "Sequence is plus-scrambled."
+        },
+        {
+            "sequence_name": "MK115065.1",
+            "error": "InternalInversion",
+            "message": "Sequence contains an internal inversion."
         }
     ],
     "MK115464.1": [
@@ -674,11 +719,6 @@
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a mutated splice donor site, GA."
         },
-        {
-            "sequence_name": "MK115520.1",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
-        },
         {
             "sequence_name": "MK115520.1",
             "error": "InternalInversion",
@@ -767,47 +807,52 @@
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "ORF gag at 236-1757 contains an internal stop codon at 374"
+            "message": "ORF gag at 789-2292 contains an internal stop codon at 927"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "ORF pol at 1537-4561 contains an internal stop codon at 1636"
+            "message": "ORF pol at 2084-5096 contains an internal stop codon at 2183"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "ORF env at 5691-8271 contains an internal stop codon at 6018"
+            "message": "ORF env at 6224-8795 contains an internal stop codon at 6551"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF vif at 4505-5087 contains an internal stop codon at 4616"
+            "message": "Smaller ORF vif at 5040-5619 contains an internal stop codon at 5151"
+        },
+        {
+            "sequence_name": "MK115095.1",
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
         },
         {
             "sequence_name": "MK115095.1",
             "error": "DeletionInOrf",
-            "message": "Smaller ORF tat_exon1 at 5297-5512 can have maximum deletions 30, got 54"
+            "message": "Smaller ORF tat_exon1 at 5830-6045 can have maximum deletions 30, got 54"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF vpu at 5528-5774 contains an internal stop codon at 5594"
+            "message": "Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6127"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF rev_exon2 at 7853-8129 contains an internal stop codon at 7910"
+            "message": "Smaller ORF rev_exon2 at 8377-8653 contains an internal stop codon at 8434"
         },
         {
             "sequence_name": "MK115095.1",
-            "error": "DeletionInOrf",
-            "message": "Smaller ORF nef at 8272-8905 can have maximum deletions 30, got 48"
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 213"
         },
         {
             "sequence_name": "MK115095.1",
             "error": "APOBECHypermutationDetected",
-            "message": "Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 2.055256122735383e-31)."
+            "message": "Query sequence shows evidence of APOBEC3F/G-mediated hypermutation (p = 9.460464921885922e-40)."
         }
     ],
     "MK115490.1": [
@@ -849,96 +894,18 @@
             "sequence_name": "OQ092466",
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a mutated splice donor site, GC."
-        },
-        {
-            "sequence_name": "OQ092466",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
         }
     ],
     "OQ092463": [
         {
             "sequence_name": "OQ092463",
             "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 33 deletions with max tolerance of 10 deletions."
+            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 26 deletions with max tolerance of 10 deletions."
         },
         {
             "sequence_name": "OQ092463",
             "error": "MajorSpliceDonorSiteMutated",
             "message": "Query sequence has a missing splice donor site, --."
         }
-    ],
-    "OQ092465": [
-        {
-            "sequence_name": "OQ092465",
-            "error": "MajorSpliceDonorSiteMutated",
-            "message": "Query sequence has a mutated splice donor site, GA."
-        }
-    ],
-    "OQ092462": [
-        {
-            "sequence_name": "OQ092462",
-            "error": "FrameshiftInOrf",
-            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
-        },
-        {
-            "sequence_name": "OQ092462",
-            "error": "InsertionInOrf",
-            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 255"
-        },
-        {
-            "sequence_name": "OQ092462",
-            "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 23 deletions with max tolerance of 10 deletions."
-        },
-        {
-            "sequence_name": "OQ092462",
-            "error": "MajorSpliceDonorSiteMutated",
-            "message": "Query sequence has a missing splice donor site, --."
-        },
-        {
-            "sequence_name": "OQ092462",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
-        }
-    ],
-    "OQ092464": [
-        {
-            "sequence_name": "OQ092464",
-            "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 28 deletions with max tolerance of 10 deletions."
-        },
-        {
-            "sequence_name": "OQ092464",
-            "error": "MajorSpliceDonorSiteMutated",
-            "message": "Query sequence has a missing splice donor site, --."
-        }
-    ],
-    "OQ092467": [
-        {
-            "sequence_name": "OQ092467",
-            "error": "FrameshiftInOrf",
-            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
-        },
-        {
-            "sequence_name": "OQ092467",
-            "error": "InsertionInOrf",
-            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 237"
-        },
-        {
-            "sequence_name": "OQ092467",
-            "error": "PackagingSignalDeletion",
-            "message": "Query Sequence exceeds maximum deletion tolerance in PSI. Contains 22 deletions with max tolerance of 10 deletions."
-        },
-        {
-            "sequence_name": "OQ092467",
-            "error": "MajorSpliceDonorSiteMutated",
-            "message": "Query sequence has a missing splice donor site, --."
-        },
-        {
-            "sequence_name": "OQ092467",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
-        }
     ]
 }
\ No newline at end of file
diff --git a/tests/expected-results-large/nonintact.fasta b/tests/expected-results-large/nonintact.fasta
index 9113fa3..36ca6f6 100644
--- a/tests/expected-results-large/nonintact.fasta
+++ b/tests/expected-results-large/nonintact.fasta
@@ -5623,656 +5623,3 @@ TGGCCCGAGAGCTGCATCCGGAGTACTACAAGGATTGCTGACACCGAGCTTTCTACAAGG
 GACTTTCCGCTGGGGACTTTCCAGGGAGGCGTGGCCGGGGCGGGACTGGGGAGTGGCGAG
 CCCTCAGATGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTCTTGTTAGAC
 CAGAT
->OQ092465
-TTATATAAATATTCAGACATTCAGAAAAATATAGAGAATGATGTAACAAATACTCTGTAC
-TTGCCACTGGAAGGGCTAATTTACTCCCAGAAAAGACAAGATATCCTTGATCTGTGGGTC
-TACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGA
-TATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAA
-GAGGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGAT
-GACCCAGAGAAAGAAGTGTTAGTATGGAGATTTGACAGTCGCCTGGCATTTCATCACATG
-GCCCGAGAGCTGCATCCGGAGTACTACAAGGACTGCTGACACCGAGCTTTCTACAAGGGA
-CTTTCCGCTGGGGACTTTCCAGGGAGGTGTGGCCGGGGCGGGACTGGGGAGTGGCGAGCC
-CTCAGATGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTCTTGTTAGACCA
-GATCTGAGCCTGGGAGCTCTCTGGCTAACTGGGGAACCCACTGCTTAAGCCTCAATAAAG
-CTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAG
-ATCCCTCAGACTCTCTTAGTCAGTGTGGAAAAATCTCTAGCAGTGGCGCCCGAACAGGGA
-CTTGAAAGCGAAAGGGAAACCAGAGGAGATCTCTCGACGCAGGACTCGGCTTGCTGAAGC
-GCGCACGGCAAGAGGCGAGGGGCGGCGACTGGAGAGTACGCCTAATTTTGACTAGCGGAG
-GCTAGAAGGAGAGAGATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGG
-TGGGAAAAAATTCGGTTAAGGCCAGGAGGAAAGAAAAAATATAAATTAAAACATATAGTA
-TGGGCAAGCAGGGAACTAGAACGGTTTGCAGTTAATCCTGGCCTGTTAGAAACATCAAAA
-GGCTGTAGACAAATATTGGAACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTT
-AAATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAACAGATAGATGTAAAA
-GACACCAAGGAAGCTTTAGATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGTA
-CAGCAAGCAGCAACTGACACAGGAAACAACAGCCAGGCCAGCCAAAATTACCCTATAGTG
-CAGAATCTCCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGG
-GTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTA
-TCAGAAGGAGCCACCCCACAAGACTTAAACACCATGCTAAACACAGTGGGGGGACATCAA
-GCAGCCATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTG
-CATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGAC
-ATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCT
-ATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGG
-ATGTATAGTCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAATCCTTTAGAGAC
-TATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAAT
-TGGATGACAGAAACATTATTGGTCCAAAATGCAAACCCAGACTGCAAGACTATTTTAAAA
-GCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGA
-CCTGGCCATAAAGCAAGAGTTTTGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTGCC
-ATAATGATGCAGAGAGGCAATTTCAGGAGCCAAAGAAAGACTGTTAAGTGTTTCAACTGT
-GGCAAAGAAGGGCATATAGCTAAAAATTGCAGGGCCCCTAGAAAAAGGGGCTGTTGGAAA
-TGTGGAAAAGAAGGACACCAAATGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGG
-AAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCA
-ACAGCCCCACCAGCAGAGAGCTTCAGGTTCGGGGAGGAGACAACAACTCCCTCTCAGAAG
-CAGGAGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAAC
-GACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGACACAGGAG
-CAGATGATACAGTATTAGAAGACATGACTTTGCCAGGAAGATGGAAACCAAAAATGATAG
-GGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTTGTAGAAATCTGTG
-GACATAAAGCTATAGGTACAGTTTTAGTAGGACCTACACCTGTCAACATAATTGGAAGAA
-ATCTGTTGACTCAAATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTAC
-CAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAG
-AAAAAATAAAAGCATTAGTAGAAATCTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAA
-AAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTA
-CTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGG
-AAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTAC
-TGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAAGTATACTG
-CATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGC
-TTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAG
-AGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATG
-TAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGATGAATTAAGACAACATC
-TGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTT
-GGATGGGGTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGTTGCCAGAAA
-AAGACAGTTGGACTGTTAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTC
-AGATTTACCCAGGGATTAAGGTAAAGCAATTATGTAGACTCCTTAAGGGAACCAAGGCAC
-TAACAGAAGTAGTACCACTAACAAGAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAAA
-TTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCAACAAAAGACTTAATAGCAGAGT
-TACAGAAGCAGGGACAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATC
-TGAAAACAGGAAAATATGCAAGAATGAGAGGTGCCCACACTAATGATGTAAAACAGCTAA
-CAGAGGCAGTGCAAAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAGT
-TTAAACTACCCATACAAAGAGAAACATGGGACACATGGTGGACAGAGTATTGGCAAGCCA
-CCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGT
-TAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTTTATGTAGATGGTGCAGCTAACAGGG
-AGACTAAATTAGGAAAAGCAGGATATGTTACTAATAGAGGAAGACAAAAAGTTGTCTCCC
-TAACTGACACCACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATT
-CGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATCCAAGCAC
-AACCAGATAAAAGTGAATCAGAGTTAGTTAATCAAATAATAGAACAGTTAATAAAAAAGG
-ACAAAGTATACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAG
-ATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCC
-AAGATGATCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGC
-CACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGCCAGTTAAAAGGGGAAG
-CCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACACTTAG
-AAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTA
-TTCCAGCAGAGACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGATGGC
-CAGTAAAAACAATACATACAGACAATGGTGGCAATTTCATCAGTACTACAGTTAAGGCCG
-CCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGCATACCCTACAATCCCCAAAGTCAAG
-GAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATCATAGGACAGGTAAGAGATCAGG
-CTGAACATCTTAAGACAGCAGTACAAATGGCAGTATACATACACAATTTTAAAAGAAAAG
-GGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATAC
-AAACTAAAGAATTACAAAAACAAATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGG
-ACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAG
-TAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTA
-GGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATT
-AGGACATGGAAAAGTTTAGTAAAACACCATATGTATATTTCAAAGAAAGCTAAGGGATGG
-ATTTATAAGCATCACTATGACAGTATTAATCCAAAAATAAGTTCAGAAGTTCACATCCCA
-CTAGGGGATGCAAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGAC
-TGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTA
-GACCCTGGCCTAGCAGACCGACTAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCT
-GCTATAAGAAATGCCATATTAGGACGTATAGTTAGTCCTAGTTGTGATTATCAAGCAGGA
-CATAACAAGGTAGGGTCTCTACAGTACTTGGCACTAACAGCACTAATAACACCAAAAAAG
-ATAAAGCCACCTTTGCCTAGTGTTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAG
-AAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGC
-TTAAGAATGAAGCTGTTAGACACTTTCCTAGGCCATGGCTACACAGCTTAGGGCAACATA
-TCTATGAAACATATGGAGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAAC
-AACTGCTGTTTATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATCCTTCAAC
-GGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAGATTAGAGCCCTGGAAGCATCCAGGA
-AGTCAGCCTAGGACTGCTTGTACCTCTTGTTATTGTAAGCAGTGTTGCTTTCATTGCCAA
-GTTTGTTTCATAACAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGA
-CGAAGAGCTCATCAAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAGTAAGTAGTA
-CATGTAATGCAACCTTTAGTAATATCAGCAATAGTAGCATTAGTAGTAGTAGCGATAATA
-GCAATAGTTGTGTGGTCCATAGTACTCATAGAATATAGGAAAATATTAAGACAAAGAAAA
-ATAGACAGGATAATTGATAGAATAAGGGAAAGAGCAGAAGACAGTGGCAATGAGAGCGAG
-GGGGATCAGGAAGAATTATCAGCACTTGTTGTGGAGATGGGGCACGATGCTCCTTGGGAT
-GTTAATGATCTGTAGCGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGT
-GTGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGGTACAGA
-GGTACATAATGTGTGGGCTACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGT
-AGTATTGGGAAATGTGACAGAGAATTTTAACATGTGGAAAAATGACATGGTAGAACAGAT
-GCATGAGGATATAATCAGTTTATGGGATCAAAGTCTAAAACCATGTGTAAAATTAACCCC
-ACTCTGTGTTACTTTGAATTGCACTAATTATAATAACACTGGTGCCAATAATACCACTAG
-TACCAATACTACCACCCCTAGTACCACTGTTAGTAGCGAGGAAAGGATGGGGGAAGGAGA
-AATAAAAAACTGCTCTTTCAATATCACCACAAGCCTAAGAGATAAGATGCAGAAAGAATA
-TGCACTCTTTTATAGACCTGATATAGTACCAATAGATAATACTAGTTATAGGTTGATAAG
-TTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTAACCTTTGAGCCAATTCCCAT
-ACATTATTGTGCCCCAGCTGGTTTTGCGATTCTAAAGTGTAACAATAAGACGTTCAATGG
-ATCAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGT
-GTCAACTCAACTACTGTTAAATGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGA
-AAATTTCTCAGACAATGCTAAAAACATAATAGTACATCTGAATAAATCTGTAGAAATTAC
-TTGTATAAGACCCAACAACAATACAAGAAAAAGTATACCTATGGGACCAGGGAAAGCATT
-TTTTGCAACAGGAGCCATAATAGGAGATATAAGACAAGCACATTGTAAAATTAATAAAAC
-GAAATGGAATAACACTTTAGAGCAGGTATTTAAAAAGTTAAGAGAACAATTTGGGAATAA
-TAAGACAATAATCTTTAATCACTCCTCAGGAGGGGACCCAGAAATTGTAACGCACAATTT
-TAATTGTGGAGGGGAATTTTTCTACTGTAATACATCAAAACTGTTTAATAGTACTTGGAA
-TGAGACTAGTTATTGGAAGGGTGAAGGGTCAAACAATGACACTATCACACTCCCATGCAG
-AATAAAGCAAATTATAAACCTGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCAT
-CAGAGGACTCATTAAATGTTCATCAAATATCACAGGGCTACTATTAACAAGAGATGGTGG
-TAACGAGAGCGAGACCACCGACACTGAGACCTTCAGACCTGTAGGAGGAAATATGAAGGA
-CAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAATAGC
-ACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGATTAGGAGC
-TATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATAACGCT
-GACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGCTGAG
-GGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCA
-GGCAAGAGTCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGAATTTGGGG
-TTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAA
-AAATCTGACACAGATTTGGGATAACATGACCTGGATGCAATGGGAAAAAGAAATTGACAA
-TTACACAAGCTTAATATACACCTTAATTGAAGAATCGCAAAACCAACAAGAAAAGAATGA
-ACTAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTGACATAACAAA
-GTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAAT
-AGTTTTTGCTGTGCTTTCTATAGCGAATAGAGTTAGGCAGGGATACTCACCATTATCGTT
-TCAGACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGGAGAAGG
-TGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAGCAATTATCTG
-GGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGAT
-TGTAACGAGGATTGTGGAACTTCTGGGACGCGGGGGGTGGGAACTCCTCAAGTATTGGTG
-GAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCTATTAGCTTGCTTAATGC
-TACAGCCATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTATTACAAAGAGCAGG
-GAGAGCTTTTCTCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGGCTTTGCTATA
-AAATGGGTGGCAAGTGGTCAAAAAGTAGTGTGGTTGGATGGCCTAAAATAAGGGAAAGAA
-TGAGACGAGCTGAGCCAGCAGCAGAACCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAG
-ACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGATTGTG
-CCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTCAGGCCTCAGGTACCTT
-TAAGACCAATGACTTATAAGGCAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGG
-GACTGGAAGGGCTAATTTACTCCCAGAAAAGACAAGATATCCTTGATCTGTGGGTCTACC
-ACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATC
-CACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGAGG
-CCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGATGACC
-CAGAGAAAGAAGTGTTAGTATGGAGATTTGACAGTCGCCTGGCATTTCATCACATGGCCC
-GAGAGCTGCATCCGGAGTACTACAAGGACTGCTGACACCGAGCTTTCTACAAGGGACTTT
-CCGCTGGGGACTTTCCAGGGAGGTGTGGCCGGGGCGGGACTGGGGAGTGGCGAGCCCTCA
-GATGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTCTTGTTAGACCAGAT
->OQ092462
-TGGAAGGGCTAATTTACTCCCAAAAAAGGCAAGATATCCTTGATCTGTGGGTTCACCACA
-CACAAGGCTATCTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATCCCC
-TGACTTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATCAGGTAGAAGAGGCCA
-ATGCAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATAGAGGACCCGG
-AGAAAGAAGTCTTAATGTGGAAGTTTGACAGCCACCTAGCATTCCGTCACATGGCCCGAG
-AGCTGCATCCGGAGTATTACAAAGACTGCTGACAGCGAGTTTTCTACAAGGGACTTTCCG
-CTGGGGACTTTCCAGGAGGTGTGGTCTGGGCGGGACTGGGGAGTGGCGAGCCCTCAGAAG
-CTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTTTGGTTAGACCAGATCAGAG
-CCTGGGAGCTCTCTGGCCAACTAGAGGACCCACTGCTTAAGCCTCAATAAAGCTTGCCTT
-GAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGATCCCTCA
-GACTTTGTTAGTTAGTGTGGAAAAATCTCTAGCAGTGGCGCCCGAACAGGGACTTGAAAG
-TGAAAGTAGAACCAGAGGAGCTCTCTCGACGCAGGACTCGGCTTGCTGAGCGCGCACGGC
-AAGAGTACGCCATAAAATTTTGACTAGCGGAGGCTAGAAGGAGAGAGATGGGTGCGAGAG
-CGTCAGTATTAAGCGGGGGAGAATTAGACAAATGGGAAAAAATTCGGTTAAGGCCAGGGG
-GAAAGAAAAAATATCAGCTAAAACATATAGTATGGGCAAGCAGGGAACTAGAGCGATTTG
-CAGTTAATCCCGGCCTGTTAGAAACATCGGAGGGCTGTAGACAAATACTAGGGCAACTAC
-AGCCCGCTCTTCAGACAGGATCAGAAGAACTTAAATCACTATTTCATACAGTAGCAACCC
-TCTATTGTGTGCATCAAAAGATAGAGGTGAAAGACACCAAAGAAGCTTTAGAGAAGATAG
-AGGAAGAGCAAAAGAAAAGTAAGAAAAAGGCACAGCAAGCAGCCGCTGACACAGGAAATA
-ACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACATGCAGGGACAAATGGTACATC
-AGCCCCTATCACCTAGAACTTTAAATGCATGGGTAAAAGTAATAGAAGATAAGGCTTTCA
-GTCCAGAAGTAATACCCATGTTTACAGCATTATCAGAAGGAGCCACCCCACAAGATTTAA
-ATACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCA
-TCAATGAGGAAGCTGCAGAATGGGATAGATTACATCCAGTGCAGGCAGGGCCTGTTGCGC
-CAGGCCAGCTACGAGAGCCAAGGGGAAGTGACATAGCAGGAACTACTAGTAACCTTCAGG
-AGCAAATAGCATGGATGACACATAATCCACCTGTCCCAGTAGGAGAAATCTATAAAAGAT
-GGATACTTCTGGGATTAAATAAAATAGTAAGAATGTACAGCCCCGTCAGCATTCTGGACA
-TAAAACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAA
-GAGCTGAGCAGGCTTCACAGGATGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAGA
-ATGCGAACCCAGATTGTAAGACTATTTTGAAAGCATTAGGACCAGCAGCTACATTAGAAG
-AAATGATGACAGCATGTCAGGGAGTAGGAGGACCCAGCCATAAAGCAAGAGTTTTGGCTG
-AAGCAATGAGCCAAGTAGCAAATCCAGCTAGCATAATGATGCAGAGAGGCAATTTTAGAA
-ACCAAAGAAAGCCTATTAAGTGTTTCAACTGTGGCAAAGAGGGGCATATTGCTAAAAATT
-GCAGGGCCCCTAGGAAAAGGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAG
-ATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGGTCTGGCCTTCCCGCAAGGGGAGGC
-CAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGT
-TTGGGGAAGAGACGACAACTCCCTCTCAGAAACCGGAGCCGATAGACAAGGAACTGTATC
-CTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGAGG
-GCAACTAAAGGAAGCTCTATTAGACACAGGAGCAGATGATACAGTTTTAGAAGAAATGAA
-TTTGCCAGGAAAATGGAAGCCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAG
-ACAGTATGATCAGATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTGTTAGT
-AGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAAATTGGCTGCACTTT
-AAATTTTCCCATTAGCCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGG
-CCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTG
-TACAGAAATGGAAAAGGAAGGAAAAATCTCAAAAATTGGGCCTGAAAATCCATACAATAC
-TCCAATATTTGCCATAAAGAAGAAAGATGGTAATAAATGGAGAAAATTAGTAGATTTCAG
-AGAACTTAATAAGAGAACTCAAGACTTTTGGGAAGTTCAATTAGGAATACCACATCCTGC
-TGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGT
-TCCCTTAGATAAGGACTTCAGGAAGTATACTGCATTTACAATACCTAGCACAAACAATGA
-GACACCAGGGATTAGATACCAGTACAATGTGCTGCCACAGGGATGGAAAGGATCACCAGC
-AATATTCCAAAGTAGCATGACAAAAATTTTGGAGCCTTTTAGAAAACAAAATCCAGACAT
-AGTTATTTATCAATACATGGATGATTTATATGTAGGGTCTGACTTAGAAATAGGGCAGCA
-TAGAGCAAAAATAGAGGAACTGAGACAACATCTATTGAAGTGGGGATTTACCACACCAGA
-CAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCCGATAA
-ATGGACAGTACAGCCTATATTGCTGCCAGAAAAAGACAGCTGGACTGTTAATGACATACA
-GAAGTTAGTGGGAAAATTGAACTGGGCAAGTCAGATTTACCCAGGAATCAAAGTAAGGCA
-GCTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTGGTACCACTAACAGCAGA
-AGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTA
-TTATGACCCATCAAAAGATTTAATAGCAGAACTACAGAAGCAGGGGCAAGGCCAATGGAC
-ATATCAAATTTATCAAGAGCCATATAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAG
-AGGTACCCACACTAATGATATAAAACAATTAACAGAGGCAGTGCAAAAAATAGCTACAGA
-AAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAATTACCCATACAAAAGGAAACATG
-GGAAGCATGGTGGATAGAGTATTGGCAAGCCACCTGGATTCCTGAATGGGAGTTTGTCAA
-TACCCCTCCCTTAGTGAAACTATGGTACCAGTTGGAAAAAGAACCCATAGTGGGAGCAGA
-AACTTTCTATGTAGATGGGGCAGCTAATAGGGAAACTAAATTAGGAAAAGCAGGATATGT
-TACTGACAAAGGAAGACAAAAAGTTGTCCCCCTAACGGACACAACAAATCAGAAGACTGA
-GCTACAAGCAATTCATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTAACAGA
-CTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAGAGTGAATCAGAACTAGT
-CAGTCAAATAATAGAGCAGTTAATAAAGAAGGAAAAGGTCTACCTGGCATGGGTACCAGC
-ACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAGTTAGTCAGTGCTGGAATCAGGAA
-AGTACTATTTTTAGATGGAATAGATAAGGCCCAAGAAGAACATGAGAAATATCACAGTAA
-TTGGAGAGCAATGGCTAGTGACTTTAACCTGCCACCTATAGTAGCAAAGGAAATAGTAGC
-CAGTTGTGACAAATGTCAGTTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCC
-TGGAATATGGCAGCTAGATTGTACACATCTAAAAGGAAAAATTATCCTGGTAGCAGTTCA
-TGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAAGAAACAGC
-ATACTTTCTCTTGAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGG
-CAGCAATTTCACCAGTAATGTGGTTAAGGCTGCCTGTTGGTGGGCGGGGATCAAACAGGA
-ATTTGGCATTCCCTACAATCCCCAAAGTCAAGAAGTAATAGAATCTATGAATAAAGAATT
-AAAGAAAATTATAGGACAGGTAAGAGATCAGGCAGAACATCTTAAGACAGCAGTACAAAT
-GGCAGTATTCGTCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGA
-AAGAATAATAGACATAATAGCAACAGACATACAAACCAAAGAATTACAAAAACAAATTAC
-AAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACC
-AGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAA
-AGTAGTGCCAAGAAGAAAAGCAAAGATTATCAGGGATTATGGAAAACAGATGGCAGGTGA
-TGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAAGAGTTTAGTAAAACATC
-ATATGCATATATCAAGGAAAGCTAAGAATTGGTTGTATAGACATCACTATGAAAGCATTC
-ATCCAAGAATAAGTTCAGAAGTACACATCCCACTAGGGGATGCTAGATTAGTAATAACAA
-CATATTGGGGTCTGCTTACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAG
-AATGGAGGGAAAGGAGATATAGAACACAAGTAGACCCTGACCTAGCAGACCAACTAATTC
-ATCTGTATTATTTTGATTGTTTTTCAGAGTCTGCTATAAGAAATGCCTTATTAGGACGTG
-TAGTTAGTCCTAGGTGTGAATATCAAGCAGGACATAACCAGGTAGGATCTCTACAGTACT
-TGGCACTAACAGCATTAATAACACCAAAAAGGAGAAAGCCACCTTTGCCTAGTGTTAGGA
-AACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAAAGGGAGCCATA
-CAATGAATGGGCACTAGAACTTTTAGAGGAACTTAAAAGTGAAGCTGTTAGACATTTTCC
-TAGGATATGGCTTCATGGATTGGGACAGCATATCTATGAAACATATGGGGATACTTGGGC
-AGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGG
-ATGTCGACATAGCAGAATAGGCATTAATCTACAGAGGAGAGCAAGGAATGGATCCAGTAG
-ATCCTAGCCTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAGACTGCTTGTACCAATT
-GTTATTGTAAAAAGTGCTGCTTTCATTGCCAAGTTTGTTTCATAAAAAAAGGCTTAGGCA
-TCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCAAGGCAGTGAGACTC
-ATCAAGTTTCTCTACCAAAGCAGTAAGTAGTACATGTAATGCGACCTTTAGAAATAGCAG
-CAATAGTAGCACTAGTAGTAGCAGTACTAATAGCAATAGTTGTGTGGTCTATAGTACTCA
-TAGAATATAGGAAAATATTAAGACAAAGAAAAATAGACAGGATAGTGGATAGAATAAGAG
-AAAGAGCAGAAGATAGTGGAAATGAGAGTGAAGGGGATCAGGAGGAATTATCAGCACTGG
-TGGAGAGGGGGCACCTTGCTCCTTGGGATATTGATGATCTGTAGTGCCACAGAGAACTTG
-TGGGTCACAGTCTACTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTTTATTTTGT
-GCATCAGATGCCAAAGCATATGATACAGAGGTACATAATGTTTGGGCCACACATGCCTGT
-GTACCCACAGACCCCAGCCCACAAGAAGTAGTATTGAAAAATGTGACAGAAAAGTTTAAT
-ATGTGGAAAAATAACATGGTAGAACAGATGCATCAGGATATAATCAGTTTATGGGATGAA
-AGCCTAAAACCATGTGTAAAATTAACCCCACTCTGTGTTACTTTAAATTGCACTAATGCT
-ACTATCAGTGGTAATGCAACAGAAGAAATAAAAAACTGCTCTTTCAATGTCAATACAAAA
-ATAGGAGGTAAGAAGCAGAAAGAACGTGCACTTTTTTATAAACTTGATGTAGTACCAATA
-GATGATGATAGTACTAATAGGACTAATACCAGCTATAGGTTGATAAGTTGTAACACTTCA
-GTCATTACACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCC
-CCGGCTGGTTTTGCGATTCTAAAGTGTGGAGATAAAGAGTTCAATGGAACAGGACTATGT
-AGAAATGTCAGCACAGTCCAATGTACACATGGAATCAGGCCAGTAGTATCAACTCAATTG
-CTGTTGAATGGCAGTCTAGCAGAAGGAGAGGTAGTAATTAAATCTGAAAATATCACGAAC
-AATGTTAAAACCATAATAGTACAGCTAAATGAAACTGTATCAATTAATTGTACAAGACCT
-AGCAACAATACAAGAAGAAGCATACATATGGGACCAGGGAGAGCCTTTTATGCAACAGGA
-GAAATAATAGGAGATATAAGGAAAGCACAGTGTATCCTGAATAAGACAGACTGGAGTGAC
-ACTTTAACAAGGATAGCTAAAAAATTACACAAGCAATTTCATGGACCAATAGCATTTGAG
-CAATCCTCAGGAGGGGACCCTGAAATTACAATGCACACTTTTAATTGTGGAGGGGAATTT
-TTCTACTGCAACACATCAGCGTTGTTTAGCGGGACCTGGAATGGTACTGCTTGGACTAAT
-GCTACTTGGGGTAATATTGCAGGTAACAATATCACACTCCAATGCAGAATAAAACAATTT
-ATAAACAGATGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGAGGAGAAATT
-AGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGCAGTAACACAACA
-AATGGTGGCGAGAATGGGACCCAGATTGGCGAGAATGTGACCCAGATCTTCAGACCTGGA
-GGAGGGGATATGAGGGACAATTGGAGAAGTGAATTATACAAATATAAAGTAGTAAAAATT
-GAGCCATTAGGAATAGCACCCACCAAGGCAAAAAGAAGAGTGGTGCAGAGAGAAAAAAGA
-GCAGTAACATTCGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGC
-GCAGCGTCAATGACACTGACGGTACAGGCCAGACTATTATTGTCTGGTATAGTGCAACAG
-CAGAACAATCTGCTGAGAGCTATTGAGGCGCAACAACATCTGTTGCAACTCACAGTCTGG
-GGCATCAAACAGCTTCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAGGGATCAACAG
-CTCCTAGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTACTGTGCCTTGGAAT
-GCTAGTTGGAGTAATAAAACTCTGGAAAAAATTTGGGGGAACATGACCTGGATGGAGTGG
-GAGAGAGAAATTGACAATTATACAGACTTAATATACACCTTAATTGAACAATCGCAGAAC
-CAACAAGAAAAGAATGAACAAGAATTATTGGAATTGGATAAATGGGCAGGCTTGTGGAAT
-TGGTTTGACATAACAAACTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGT
-TTAGTAGGTTTAAGAATAGTTTTTGCTGTGCTTTCTATAGTAAATAGAGTTAGGCAGGGA
-TACTCACCATTATCATTCCAGACCCGCCTCCCAGCCTCGAGGGGACCCGACAGGCCCGAA
-GGAACCGACGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGATCATTAGTGAACGGA
-TTCTTAGCACTCATCTGGATCGACCTGCGGAGTCTGTTCCTCTTCAGCTACCTCCGCTTG
-AGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAG
-GCCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCT
-GTTAGTTTGCTTAATGCTATAGCTATATCAGTAGCGGAGGGAACAGATAGGATTATAGAA
-GCAATACAAAGAATTTGTAGAGCTATCTTACACATACCTACAAGGATAAGACAGGGCTTA
-GAAAGGGCTTTGCTATAAGATGGGTGGCAAGGGGTCAAAAATGAGGGGATGGGTTGCTGT
-AAGGGAAAAAATGAGGCGAACTAAGCCAGAAGATGAGCCAGCAGCAAATGGGGTGGGGGC
-AGCATCTCGAGACTTGGAGAAATATGGCGCACTCACAAGTAGCAATACAGTAGCTACTAA
-TGCTGATTTAGCTTGGCTAGAAGCACAAGAGGAAGAGGAGGTGGGCTTTCCAGTCAGACC
-TCAAGTACCTTTAAGACCAATGACTTACAAGGGAGCTCTAGATCTCAGCCACTTTTTAAA
-AGAAAAGGGGGGACTGGAAGGGCTAATTTACTCCCAAAAAAGGCAAGATATCCTTGATCT
-GTGGGTTCACCACACACAAGGCTATCTCCCTGATTGGCAGAACTACACACCAGGGCCAGG
-GATCAGATATCCCCTGACTTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATCA
-GGTAGAAGAGGCCAATGCAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGG
-GATAGAGGACCCGGAGAAAGAAGTCTTAATGTGGAAGTTTGACAGCCACCTAGCATTCCG
-TCACATGGCCCGAGAGCTGCATCCGGAGTATTACAAAGACTGCTGACAGCGAGTTTTCTA
-CAAGGGACTTTCCGCTGGGGACTTTCCAGGAGGTGTGGTCTGGGCGGGACTGGGGAGTGG
-CGAGCCCTCAGAAGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTTTGGTT
-AGACCAGATCAGAGCCTGGGAGCTCTCTGGCCAACTAGAGGACCCACTGCTTAAGCCTCA
-ATAAAGCTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAA
-CTAGAGATCCCTCAGACTTTGTTAGTTAGTGTGGAAAAATCTCTAGCAGTTACA
->OQ092464
-TTCATTGGAAGGGCTAATTCACTCCCAAAAAAGACAAGATATCCTTGATCTGTGGGTCTA
-CCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGGTA
-TCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGA
-GGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGATGA
-CCCAGAGAAAGAAGTGTTAGTATGGAGGTTTGACAGTCGCCTGGCATTTCATCACATGGC
-CCGAGAGCTGCATCCGGAGTACTACAAGGACTGCTGACATCGAGCTTTCTACAAGGGACT
-TTCCGCTGGGGACTTTCCAGGGAGGCGTGGCCGGGGCGGGACTGGGGAGTGGCGAGCCCT
-CAGATGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTCTCTGGTTAGACCAGA
-TCTGAGCCTGGGAGCTCTCTGGCTAACTGGGGAACCCACTGCTTAAGCCTCAATAAAGCT
-TGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGAT
-CCCTCAGACTCTCTTAGTCAGTGTGGAAAATCTCTAGCAGTGGCGCCCGAACAGGGACTT
-GAAAGCGAAAGGGAAACCAGAGGAGATCTCTCGACGCAGGACTCGGCTTGCTGAAGCGCG
-CACGGCAAGAGGCGAGGGGCGGCGTTTGACTAGCGGAGGCTAGAAGGAGAGAGATGGGTG
-CGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGATGGGAAAGAATTCGGTTAAGGC
-CAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAAC
-GGTTCGCAGTTAATCCTGGCCTGTTAGAAACATCAAAAGGCTGTAGACAAATATTGGAAC
-AGCTACAGCCAGCCCTTCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAGTAG
-CAACCCTCTATTGTGTGCATCAAAAGATCGATGTAAAAGACACCAAGGAAGCTTTAGATA
-AGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAG
-GAAACAACAGCCAGGCCAGCCAAAATTACCCTATAGTGCAGAACATTCAGGGGCAAATGG
-TACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGG
-CTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCGCTATCAGAAGGAGCCACCCCACAAG
-ATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCTATGCAAATGTTAAAAG
-AAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCTA
-TTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCC
-TTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATA
-AAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGGATGTATAGCCCTACCAGCATTC
-TGGACATAAGACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAA
-CTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAATTGGATGACAGAAACATTATTGG
-TCCAAAATGCAAACCCAGATTGCAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACAC
-TAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCTGGCCATAAAGCAAGAGTTT
-TGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTACCATAATGATGCAGAGAGGCAATT
-TAAGGAGCCAAAGAAAGACTGTTAAGTGTTTCAACTGTGGCAAAGAAGGGCATATAGCTA
-AAAATTGCAGGGCTCCTAGGAAAAGGGGCTGTTGGAAATGTGGAAAAGAAGGACACCAAA
-TGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCCACAAGG
-GGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCT
-TCAGGTTTGGGGAAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAAGAAA
-TGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGAT
-AGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGA
-CATGACTTTACCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAA
-AGTAAGACAGTATGATCAGATACTCGTAGAAATCTGTGGACATAAAGCTATAGGTACAGT
-ATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTAACTCAGATTGGTTG
-CACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAAT
-GGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGA
-AATCTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATA
-TAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGA
-TTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACA
-TCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTT
-TTCAGTTCCCTTAGATAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAA
-CAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATC
-ACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCC
-AGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGG
-GCAGCATAGAACAAAAATAGAGGAATTAAGACAACATCTGTTGAAGTGGGGATTTACCAC
-ACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGATATGAACTCCATCC
-TGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAGGACAGTTGGACTGTCAATGA
-CATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGT
-AAAGCAATTATGTAAACTCCTTAGGGGAACCAAGGCACTAACAGAAGTAATACCACTAAC
-AAGAGAAGCAGAGCTAGAACTGGCAGAGAACAGGGAAATTCTAAAAGAACCAGTACATGG
-AGTGTATTATGACCCAACAAAAGACTTAATAGTAGAAATACAGAAGCAGGGGCAAGGCCA
-ATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAG
-AATGAGAGGTGCCCACACTAATGATGTAAAACAACTAACAGAGGCAGTGCAAAAAATAAC
-CACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAGTTTAGACTACCCATACAAAGAGA
-AACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTT
-TGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGG
-AGCAGAGACTTTCTATGTAGATGGTGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGG
-ATATGTTACTAACAGAGGAAGACAAAAAGTTGTCTCCCTAACTGACACAACAAATCAGAA
-GACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGT
-AACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGA
-GTTAGTTAATCAAATAATAGAACAGTTAATAAAAAAGGACAAGGTATACCTGGCATGGGT
-ACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAAT
-CAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGACGATCATGAGAAATATCA
-CAGTAATTGGAGAGCAATGGCTAGTGACTTTAACCTGCCACCTGTAGTAGCAAAAGAAAT
-AGTAGCCAGCTGTGATAAATGCCAGTTAAAAGGGGAAGCCATGCATGGACAAGTAGACTG
-TAGTCCAGGAATATGGCAACTAGATTGTACACACTTAGAAGGAAAAGTTATCCTGGTAGC
-AGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGA
-AACAGCATACTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGA
-CAATGGCGGCAATTTCATCAGTACTACAGTTAAGGCCGCCTGCTGGTGGGCGGGGATCAA
-GCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAA
-AGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGT
-ACAAATGGCAGTATACATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGC
-AGGGGAGAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACA
-AATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGACCCACTTTGGAA
-AGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGA
-CATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGC
-AGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGGACATGGAAAAGTTTAGTAA
-AACACCATATGTATATTTCAAGGAAAGCTAAGGGATGGGTTTATAAGCATCACTATGACA
-GTACTCATCCAAGAATAAGTTCAGAAGTTCACATCCCGCTAGGGGATGCGAAATTGGTAA
-TAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCT
-CCATAGAATGGAGGAAGAAGAGATATAGCACACAAGTAGACCCTGGCTTAGCAGACCAAC
-TAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGCCATATTAG
-GACATATAGTTAGTCCTAGCTGTGATTATCAAGCAGGACATAACAAGGTAGGATCTCTAC
-AGTACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTG
-TTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGA
-GCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACA
-CTTTCCTAGGCCATGGCTCCACAGCTTAGGGCAACATATCTATGAAACATATGGAGATAC
-TTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAG
-AATTGGGTGTCGACATAGCAGAATAGGCATCATTCAACGGAGGAGAGCAAGAAATGGAGC
-CAGTAGATCCTAGATTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAGGACTGCTTGTA
-CCTCTTGTTATTGTAAGCAGTGTTGCTTTCATTGCCAAGTTTGTTTCATAACAAAAGGCT
-TAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCCTCCAGACAGTC
-AGACTCATCAAGCTTCTCTATCAAAGCAGTAAGTAGTACATGTAATGCAACCTTTACACA
-TAGCAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGTGTGGTCTATAG
-TATTCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGATAATTGATAGAA
-TAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAGGGGGATCAAGAAGAATTATCAG
-CACTTGTGGAGATGGGGCATTGTGCTCCTTGGGATGTTAATGATCTGTAGTGCTACAGAA
-AAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACTACCACTCTA
-TTTTGTGCATCAGATGCTAAAGCATATGATACAGAGGTACATAATGTTTGGGCTACACAT
-GCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGGAAATGTGACAGAGAAT
-TTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGG
-GATCAAAGTCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTGAATTGCACT
-AATTATAATAACACCAATAATACCACTAGTACCAATGATACCACTAGTACCACTACTAGT
-AGCGGGGAAAAGATGAAGGAAGGAGAGATAAAAAACTGCTCTTTCAATATCACCACAAGC
-ATAAGAGATAAGGTGCAGAAAGAATATGCACTCTTTTATAAACCTGATATAGTACCAATA
-GATAATGATAATACTAGTTATAGGTTGATAAGTTGTAACACCTCAGTCATTACACAGGCC
-TGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCAGCTGGTTTTGCG
-ATTCTAAAGTGTAACGATAAGAAGTTCAATGGAACAGGATCATGTACAAATGTCAGCACA
-GTACAATGTACACATGGAATTAGGCCAGTAGTGTCAACTCAACTACTGTTAAATGGCAGT
-CTAGCAGAAGAAGAGGTAGTAATTAGATCTGAAAATTTCTCAGACAATGCTAAAACCATA
-ATAGTACATCTGAATGAATCTGTAGAAATTACTTGTATAAGACCCAACAACAATACAAGA
-AAAAGTATACCTATAGGACCAGGGAGAGCATTTTATGCAACAGGAGCCATAATAGGAGAT
-ATAAGACAAGCACATTGTAAAATTAATAAAACGAAATGGAATAACACTTTAGACCAGATA
-TTTAAAAAGTTAAGAGAACAATTTGGGAATAAGACAATAATCTTTACTCACTCCTCAGGA
-GGGGACCCAGAAGTTGTAACGCACAATTTTAATTGTGGAGGGGAATTTTTCTACTGTAAT
-ACAACAAAACTGTTTAATAGTACTTGGAATGAGACTAGTTATTGGAAGGATGAAAGGTCA
-AATGACAATGACACTATCACACTCCCATGCAGAATAAAGCAAATTATAAACCTGTGGCAG
-GAAGTAGGAAAAGCAATGTATGCCCCTCCCATTAGAGGATACATTAAATGTTCATCAAAT
-ATCACAGGGCTGCTAATAACAAGAGATGGTGGGAAAAACGAGAGCAACACCACCGAGACC
-TTCAGACCTGGAGGAGGAAATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAA
-GTAGTAAAAATTGAACCATTAGGAATAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAG
-AGAGAAAAAAGAGCAGTGGGAATAGGAGCTGTGTTCCTTGGGTTCTTGGGAGCAGCAGGA
-AGCACTATGGGCGCAGCGTCAATAACGCTGACGGTACAGGCCAGACTATTATTGTCTGGT
-ATAGTGCAACAGCAAAACAATCTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAA
-CTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTA
-AAGGATCAACAGCTCCTGGGAATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCT
-GTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGGATAACATGACC
-TGGATGGAATGGGAAAGAGAAATTGACAATTACACAAGCTTAATATACACTTTAATTGAA
-AAATCGCAAAACCAACAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCA
-AGTTTGTGGAATTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTCATAATG
-ATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGCGAATAGA
-GTTAGGCAGGGATACTCACCATTATCGTTTCAGACCCACCTCCCAGCCCCGAGGGGACCC
-GACAGGCCAGAAGGAATCGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCA
-TTAGTGAACGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGC
-TACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGC
-AGGGGGTGGGAACTCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTA
-AAGAATAGTGCTATTAGCTTGCTTAATGCCACAGCCATAGCAGTAGCTGAGGGGACAGAT
-AGGATTATAGAAGTATTACAAAGAGCTGGGAGAGCTTTTCTCCACATACCTAGAAGAATA
-AGACAGGGCTTAGAAAGGGCTTTGCTATAAGATGGGTGGTAAGTGGTCAAAGAGTAGTGT
-GGTTGGATGGCCTGCTATAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGATGGGGT
-GGGAGCAGCATCTCGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGC
-TACCAATGCTGATTGTGCCTGGCTAGAAGCACAAGAGGATGAGGAGGTGGGTTTTCCAGT
-CAGGCCTCAGGTACCTTTAAGACCAATGACTTACAAGGGAGCTGTAGATCTTAGCCACTT
-TTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAAAAGACAAGATATCCT
-TGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGG
-GCCAGGGATCAGGTATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCC
-AGATAAGGTAGAAGAGGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCT
-GCATGGGATGGATGACCCAGAGAAAGAAGTGTTAGTATGGAGGTTTGACAGTCGCCTGGC
-ATTTCATCACATGGCCCGAGAGCTGCATCCGGAGTACTACAAGGACTGCTGACATCGAGC
-TTTCTACAAGGGACTTTCCGCTGGGGACTTTCCAGGGAGGCGTGGCCGGGGCGGGACTGG
-GGAGTGGCGAGCCCTCAGATGCTGCATATAAGCAGCTGCTTTTTGCCTGTACTGGGTCTC
-TCTGGTTAGACCAGAT
->OQ092467
-CTAGCATGTTCTATGCCCTGGCCTACGCTCAGTCACTCAGTACATCTGAGGGCTTGTAAC
-TGGAAGGGCTAATTTACTCCCCAAAAAGACAAGAAATCCTTGATCTGTGGGTCTACCACA
-CACAAGGCTACTTCCCTGATTGGCAGAACTATACACCAGGGCCAGGGACTAGATATCCAT
-TAACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATGAAGGAGAGAATAGCT
-GCTTGCTACACCCGATGAACCAGCATGGGGCAGATGACACAGAAAGAGAAGTATTAATGT
-GGAAGTTTGACAGCAGCCTAGCATTTCATCACAAGGCCCGAGAGCTGCATCCGGAGTACT
-ACAAAAACTGCTGACACCAAGTTTCTACAAGGGACTTTCCACTGGGGACTGCCCAGGGAG
-GTGTGGCATGGGCGGGACTGGGGAGTGGCGAGCCCTCAGATGCTGCATATAAGCAGCCGC
-TTTTCGCCTGTACTGGGTCTCTCTAGCTGGACCAGATCTGAGCCTGGGAGCTCTCTGGCT
-AACTAGGGAACCCACTGCTTAAGCCTCAATAAAGCTTGCCTTGAGTGCTTCAAGTAGTGT
-GTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGATCCCTCAGACCCTTTTAGTCAGTGT
-GGAAAATCTCTAGCAGTGGCGCCCGAACAGGGACTTGAAAACGAAAGTAGAACCAGAGAA
-GCTCTCTCGACGCAGGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGTACGCCAAAATTT
-TTGACTAGCGGAGGCTAGAAGGAGAGAGATGGGTGCGAGAGCGTCAGTATTAAGCGGGGG
-AGAATTAGATAAATGGGAAAAAATTCGGTTAAGGCCAGGAGGAAAAAAACAATACAAATT
-AAAACATCTAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTTCT
-AGAGACATCAGAAGGGTGTAGACAAATACTGGGACAGCTACAACCAGCTCTTCAGACAGG
-ATCAGAAGAATTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAA
-GATAGAGGTAAAAGACACCAAGGAAGCTTTAGAGAAAATAGAGGAAGAGCAAAACCAAAG
-TAAGAAAAAAGCAGCAGCTGCAGCAGCTGACACAGGAAACAGAAGCCAGGTCAGCCAAAA
-TTACCCTATAGTGCAGAACCTCCAGGGGCAAATGGTACATCAGCCTTTATCACCTAGAAC
-TTTAAATGCATGGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCAT
-GTTTACAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAAT
-AGGTGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATTAATGAGGAAGCTGCAGA
-ATGGGATAGATTGCATCCAGTGCAGGCAGGGCCTGTTGCACCAGGCCAAATGAGAGAACC
-AAGGGGAAGTGACATAGCAGGAACTACTAGTAACCTTCAGGAACAAATAGGATGGATGAC
-ACATAATCCACCTATCCCAGTAGGAGATATCTATAAAAGATGGATAATTCTGGGGTTAAA
-TAAAATAGTAAGAATGTATAGCCCTGTCAGTATTCTGGATATAAAACAAGGACCAAAGGA
-ACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTGAGAGCCGAGCAAGCAACACA
-GGAAGTAAAGAATTGGATGACAGAAACTTTGCTGGTCCAAAATGCAAATCCAGATTGTAA
-GACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCA
-GGGAGTGGGGGGACCAGGCCACAAAGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAAC
-AAATTCAACTGTAATGATGCAGAGAGGCAATTTTAGGAATCAAAGAAAGACAGTTAAGTG
-TTTCAATTGTGGCAAAGAAGGGCATATAGCAAGAAATTGCAGGGCCCCTAGAAAAAAGGG
-CTGTTGGAAATGTGGAAAAGAAGGGCACCAAATGAAAGATTGTACTGAGAGACAGGCTAA
-TTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAA
-ACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCC
-CTCTCAGAAGCAGGGGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAAATCACT
-CTTTGGCAACGACCCCTCGTCACAATAAAAATAGGGGGGCAGCTAAAGGAAGCTCTATTA
-GATACAGGAGCAGATGATACAGTATTAGAAGATATGAATTTACCAGGAAAATGGAAACCA
-AAAATGATAGGAGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCGTA
-GAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATA
-ATTGGAAGAAATCTGTTGACTCAGATTGGCTGTACTTTAAATTTTCCCATTAGTCCTATT
-GAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCA
-TTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGA
-AAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCTATAAAGAAA
-AAAGATAGTACTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAA
-GACTTCTGGGAAGTTCAATTAGGAATACCGCATCCTGCAGGGTTAAAAAAGAAAAAATCA
-GTAACAGTACTAGATGTGGGTGATGCCTATTTTTCAATTCCCTTAGATAAAGACTTCAGG
-AAGTACACTGCATTTACCATACCTAGTACAAACAATGAGACACCAGGGATTAGATATCAG
-TACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACA
-AGGATATTAGAACCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGAT
-GATTTGTATGTGGGATCTGACTTAGAAATAGGACAGCATAGAACAAAAATAGAGGAACTG
-AGACAACATCTGTTGAAGTGGGGACTTACCACACCAGACAAAAAACATCAGAAAGAACCT
-CCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAG
-CTGCCAGAAAAAGATAGCTGGACTGTCAATGACATCCAGAAGTTAGTGGGAAAATTGAAT
-TGGGCAAGTCAGATTTATGCAGGAATTAAAGTAAGGCAATTATGTAAACTCCTTAGGGGA
-ACTAAAGCACTAACAGAAGTAGTACCACTAACAGCAGAAGCAGAGCTAGAACTGGCAGAA
-AACAGGGAGATTCTAAAAGAACCGGTACATGGAGTGTATTATGACCCAACGAAAGACCTA
-ATAGCAGAACTACAGAAGCAGGGGCAAAGTCAATGGACATATCAAATTTATCAAGAACCA
-TTTAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAGGGGTGCCCACACTAATGATGTG
-AAACAATTAACAGAGGCAGTGCAAAAAATAGCCATAGAAAGCATAGTAATATGGGGAAAG
-ACCCCTAAATTTAAATTACCTATACAAAAAGAAACATGGGAAACATGGTGGACAGACTAT
-TGGCAAGCCACCTGGATTCCTGATTGGGAGTTTGTCAATACCCCTCCCTTAGTAAAATTA
-TGGTACCAGTTAGAAAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCA
-GCTAATAGAGAAACTAGATCAGGCAAAGCAGGATATGTTACTGATAGAGGAAGACAAAAG
-GTTGTCCCCCTAACAGACACAACAAACCAGAAGACTGAGTTACAAGCAATTTATCTAGCT
-TTGCAGGATTCAGGATTAGAAGTAAACATAGTGACAGACTCACAATATGCACTAGGAATC
-ATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGTTA
-ATAAAGAAGGAAAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAAT
-GAACAAGTAGATAAATTAGTCAGTTCTGGAATCAGGAAGATACTATTTTTAGATGGAATA
-ACTAAGGCCCAAGATGATCATGAGAGATACCACAGCAATTGGAGAGCAATGGCTAGTGAT
-TTTAACCTGCCACCTATAATAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTA
-AAAGGAGAAGCCACGCATGGACAAGTAGACTGCAGTCCAGGAATATGGCAACTAGATTGT
-ACGCATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAA
-GCAGAAGTTATTCCAGCAGAGACAGGGCAAGAAACAGCATACTTTCTCTTAAAACTAGCA
-GGAAGATGGCCAGTAAAGACAGTACATACAGATAATGGCAGCAATTTCACCAGTGCTGCG
-GTTAAGGCCGCCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGTATTCCCTACAATCCC
-CAAAGTCAAGGAGTCATAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAAGTA
-AGAGAGCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTT
-AAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCA
-ACAGACATACAAACTAAAGAATTACAGAAACAAATCACAAAAATTCAAAATTTTCGGGTT
-TATTACAGGGACAGCAGAGACCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGT
-GAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAGGCA
-AAGATCATTAGAGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAG
-GATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATACATGTCTCAAAGAAAGC
-TAAGGGATGGGTTTATAGACACCACTATGAAAGCACCCATCCAAGAATAAGTTCAGAAGT
-ACATATCCCGCTAGGGGAAGCTAGATTAGTAATAGCAACATATTGGGGTCTGCATACAGG
-AGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGGGAAAAGAAATATAT
-CACACAAGTAGACCCTGACCTAGCAGACCAACTAATTCATCTGCATTATTTTGATTGTTT
-TTCAGAGTCTGCTATAAGAAATGCCATAGTAGGACGTTTAGTTAGCCCTCAGTGTGAATA
-TCAAACAGGACATAACAAGGTAGGATCTCTACAGTACTTGGCACTAGTAGCATTAATAAC
-GCCAAAAAAGAGAAAGCCACCTTTGCCTAGTGTTAGGAAATTGACAGAGGATAGATGGAA
-CAAGCCCCAGAAGACCAAGGACCACAGAGGGAGCCATATAATGAGTGGACACTAGAGCTT
-TTAGAGGAACTTAAGAGTGAAGCTGTTAGACATTTTCCTAGGATATGGCTCCATAACTTA
-GGACAATACATCTATGCAACTTATGGGGATACTTGGACAGGAGTGGAAGCTTTAATAAGA
-ATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGATGTCAACATAGCAGAATAGGC
-ATTACTCGACAGAGGAGAGCAAGGAATGGAGCCAGTAGATCCTAGACTAGAGCCCTGGAA
-GCATCCAGGAAGTCAGCCTAAGACTCCTTGTACCAATTGCTATTGTAAAAAGTGTTGCTT
-TCATTGCCAAGTCTGTTTCATAAAAAAAGCCTTAGGCATCTCCTATGGCAGGAAGAAGCG
-GAGACAGCGACGAAGACCTCCTCAAAACAGTGAGACTCATCAAGCAGCTCTATCAAAGCA
-GTAAGTAGTACATGTAATGCAACCCTTAGTAATATTAGCAATAGTAGCATTAGTAGTAGC
-AGCAATAATAGCAATAGTTGTGTGGACCATAGTGTTAATAGAATATAGGAAAATATTAAG
-ACAAAGAAAGATAGATAGCATAATTAATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAA
-TGAGAGTGAAGGAGATCAGGAAGAATTGTCGGCACTTGTGGAGATGGGGCACCATGTGGA
-AATGGGGCACCATGCTCCTTGGAATGTTGATGATCTGTAGTGCTAAAGAACAATTGTGGG
-TCACAGTTTATTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTTTATTTTGTGCAT
-CAAATGCTAAAGCATATGACCCAGAGGTGCATAATGTTTGGGCCACACATGCCTGTGTAC
-CCACAGACCCTAACCCACAAGAAGTACCATTGGAAAATGTGACAGAAAATTTTAATATGT
-GGAAAAATAACATGGTAGAACAGATGCATGAGGACATAATCAGTTTATGGGATCAAAGCT
-TAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTATTTTAAATTGCACTAATGTGAATG
-TTACTACTAACAATAATAGTAGTAGTGAGGAACAGATGGAGGTAGGAGAAATAAAAAACT
-GCTCTTTCAATATTGCCACAAGAATAAAAAATAAGATAAAGAAAGAATATGCACTTTTTA
-ATAGACTTGATGTAGTACCAATAGAGGATGATAATACAAGCTATATGTTGATAAATTGTA
-ATACCTCAGTCACTACACAGGCCTGTCCAAAGGTAACCTTTGAACCAATTCCCATACATT
-ATTGTGCCCCGGCTGGTTTTGCGATACTAAAATGTAATGATAAAAAGTTCAATGGAACAG
-GACCATGTAACAATGTCAGCACAGTACAATGTACACATGGAATTAAGCCAGTAGTGTCAA
-CTCAACTGCTGTTAAATGGTAGTCTAGCAGAAGAAGAGATAGTAGTTAGATCTGAAAATT
-TCACGAACAATGCTAAAACCATAATAGTACAGCTGAATAAAACTATAGAAATTAATTGTA
-TAAGACCCAACAATAATACAAGAAAAAGTATATCTTTAAGACCGGGGCAAGCAATTTATG
-CAACAGAAGACATAATAGGAAATATAAGACAAGCACATTGTAACATTAGGAGAAAAGACT
-GGGATAAAGCTTTAGAACAGGTAGTTGCAAAATTAAGAGAACAATTTAAGAATAAAACAA
-TAGTCTTTAATCAATCCTCAGGAGGAGACCCAGAAATTGTAATGCATAGTTTTAATTGTG
-CAGGGGAATTTTTCTACTGTAACACAACAAAGCTGTTTAATAGTACTTGGAATGTTAATA
-ACACTCGGAATAATACTACTGATAATAGCACCATCACTCTCCCGTGCAGAATAAAACAAA
-TTATAAACAGATGGCAGGAAGTAGGAAAAGCAATGTATGCTCCTCCCATCAAAGGGCAAA
-TTAAATGTTCATCAAATATTACAGGGTTATTATTAACAAGAGATGGTGGTGTCCGCGAGG
-ACAACGCCCCTGAGATCTTTAGACCTGGAGGAGGAGATATGAGGGATAATTGGAGAAGTG
-AATTATATAAATATAAAGTAGTAAAAATTGAGCCATTAGGAGTGGCACCCACCAAGGCAA
-AGAGAAGAGTGGTGCAAAGAGGAAAAAGAGCAGTAACGCTGGGAGCTATGTTCCTTGGGT
-TCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCA
-GGCAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATCTGCTGAGGGCTATTGAGGCGC
-AACAGCATATGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGG
-CTGTGGAAAGATACTTACAGGATCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAAC
-TCATTTGCACCACTGCTGTACCTTGGAATACTAGTTGGAGTAATAAATCTTTGGAAAAGA
-TTTGGAAAAACATGACCTGGATGGAGTGGGAGAAAGAAATTAACAATTACACAAGGACAA
-TATACACCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAGGAATTATTGG
-AATTGGATAAGTGGGCAAGTTTGTGGAATTGGTTTGACATAACAAACTGGCTGTGGTATA
-TAAAAATATTCATCATGATAGTAGGAGGTATAGTAGGGTTAAGAATAGTTTTTACTGTGC
-TTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTGTCATTCCAGACCCGCTTCC
-CAGCTCCGAGGGGACCAGACAGGCCCGAAGGAACAGAAGAAGAAGGTGGAGAGAGAGACA
-GAGACAGATCCGGGCAATTAGTGAACGGATTCTTTGCGCTTATCTGGGACGACCTGCAGA
-GCCTGTGCCTCTTCAGCTACCGCCGCTTGAGAGACTTACTCTTGATTGTAGCGAGGATTG
-TGGAACTTCTGGGACACAGGGGGTGGGAGGCCCTCAAATATTGGTGGAATCTCCTGCAGT
-ACTGGAGTCAGGAACTAAAGAAGAGTGCTGTTAGTTTGCTTAATGCCACAGCTATAGCAG
-TAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAAGAATTGGTAGAGCTATTCTCC
-ACATCCCTAGAAGAATAAGACAGGGCTTAGAAAGGGCTTTGCTATAAGATGGGTGGCAAG
-TGGTCAAAATGTAGTCTGGTTGGATGGCCTGCTATAAGGGAAAGAATGAGACGAGCTGAG
-CCAGCTCCAGCAGCAGAAGGGGTGGGAGCAGCATCTCGAGACTTGGAAAAACATGGAGCA
-CTCACAACTAGTAATACAGCAGCTAATAATGCTGCTTGTGCCTGGCTGGAAGCACAAGAG
-GAGGAAGAGGTGGGGTTTCCAGTCAGACCTCAGGTACCTTTAAGACCAATGACTTACAAA
-GGAGCTATGGATCTTGGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTTAC
-TCCCCAAAAAGACAAGAAATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCT
-GATTGGCAGAACTATACACCAGGGCCAGGGACTAGATATCCATTAACCTTTGGATGGTGC
-TTCAAGCTAGTACCAGTTGAGCCAGATGAAGGAGAGAATAGCTGTTTGCTACACCCGATG
-AACCAGCATGGGGCAGATGACACAGAAAGAGAAGTATTAATGTGGAAGTTTGACAGCAGC
-CTAGCATTTCATCACAAGGCCCGAGAGCTGCATCCGGAGTACTACAAAAACTGCTGACAC
-CAAGTTTCTACAAGGGACTTTCCACTGGGGACTGCCCAGGGAGGTGTGGCATGGGCGGGA
-CTGGGGAGTGGCGAGCCCTCAGATGCTGCATATAAGCAGCCGCTTTTCGCCTGTACTGGG
-TCTCTCTAGCTGGACCAGATCTGAGCCTGGGAGCTCTCTGGCTAACTAGGGAACCCACTG
-CTTAAGCCTCAATAAAGCTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGT
-GACTCTGGTAACTAGAGATCCCTCAGACCCTTTTAGTCAGTGTGGAAAATCTCTAGCAGT
-AACCCCAGGATGAAAATAGATGCCACATTTGAAGAGTCTCCAAGTTTGTGGTTCTATAGC
-AGACACCGCTTACAGAAAAGACAATGGAGCTGGGAGGAAAGGAAAAGGCAGCCTTGCATC
-CTAGGGGCCGGCTGCTGGGAGGAAACAGCACTCCTCCCCTCTATAACCCAAAGACAGCTT
-TGTGATAGCCACTTGCCAGAGTAGAATAAACCTCCC
diff --git a/tests/expected-results-large/orfs.json b/tests/expected-results-large/orfs.json
index c86efbe..ce391c6 100644
--- a/tests/expected-results-large/orfs.json
+++ b/tests/expected-results-large/orfs.json
@@ -116,18 +116,18 @@
             "name": "gag",
             "orientation": "forward",
             "start": 639,
-            "end": 2148,
-            "distance": 0.3007843137254913,
+            "end": 2142,
+            "distance": 0.05400000000000005,
             "protein": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*R*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGATCGATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAGGATAGAGATAAAAGACACCAAGGAAGCTTTAGAGAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAGGACACAGCAACCAGATCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAGTGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGAGTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCYWYCTWTCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAAGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGACCWGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGCCATAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAATTCAGCTACCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAGATTGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGAGTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAG"
+            "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*",
+            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGATCGATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAGGATAGAGATAAAAGACACCAAGGAAGCTTTAGAGAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAGGACACAGCAACCAGATCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAGTGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGAGTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCYWYCTWTCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAAGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGACCWGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGCCATAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAATTCAGCTACCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAGATTGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGAGTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 1934,
             "end": 4946,
-            "distance": 0.1750246791707799,
+            "distance": 0.03589232303090717,
             "protein": "FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
             "aminoacids": "FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAGTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATGAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAGCTGAGACAACATCTGTTGAGGTGGGGACTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAGGCAATTATGTAAACTCCTTAGGGGAACCAGAGCATTAACAGAAGTAATACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGTATAGTAATATGGGGAAAGACTCCTAGATTTAAACTACCCATACAAAAGGAAACATGGGAAACATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCTTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGGTATGTTACTAACAAAGGAAGACAAAAGGTTGTCCCCCTAACTAACACAACAAATCAGAAGACTGAGTTACAAGCAATTTATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATCAAAGTGAATCAGAGTTAGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGGTCTATCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAATACTATTTTTAGATGGAATAGATAAGGCCCAAGATGAACATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAGGAAACAGCATATTTTCTTTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTGCTACGGTTAAGGCCGCCTGTTGGTGGGCGGGAATCAAGCAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
@@ -137,7 +137,7 @@
             "orientation": "forward",
             "start": 4890,
             "end": 5469,
-            "distance": 0.34375,
+            "distance": 0.0625,
             "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAAAAGTTTAGTAAAACACCATATGTATGTTTCAGGGAAAGCTAGGGGATGGTTTTATAGACATCACTATGAAAGAACTCATCCAAGAATAAGTTCAGAAGTATACATCCCACTAGGGGATGCTAGATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGAACTAGCAGACCAACTAATTCATCTGTATTACTTTGACTGTTTTTCAGACTCTGCTATAAGAAAGGCCTTATTAGGACATATAGTTAGCCCTAGGTGTGAATATCAAGCAGGACATAACAAGGTAGGATCTCTACAATACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTACAAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAG"
@@ -146,18 +146,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 5408,
-            "end": 5699,
-            "distance": 0.375,
+            "end": 5702,
+            "distance": 0.21153846153845945,
             "protein": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS",
-            "aminoacids": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACATTTTCCTAGGATTTGGCTCCATGGCTTAGGGCAACATATCTATGAAACTTATGGGGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATCCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGCGTTACTCAACAGAAGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
+            "aminoacids": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*T",
+            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACATTTTCCTAGGATTTGGCTCCATGGCTTAGGGCAACATATCTATGAAACTTATGGGGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATCCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGCGTTACTCAACAGAAGAGAGCAAGAAATGGAGCCAGTAGATCCTAGACT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5679,
             "end": 5895,
-            "distance": 0.2777777777777777,
+            "distance": 0.29166666666666674,
             "protein": "MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ",
             "aminoacids": "MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ",
             "nucleotides": "ATGGAGCCAGTAGATCCTAGACTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAAACTGCTTGTACCACTTGCTATTGTAAAAAGTGTTGCTTTCATTGCCAAGTTTGTTTCATGACAAAAGCCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAGACAGTCAGACTCATCAAGTTTCTCTATCAAAGCAG"
@@ -167,7 +167,7 @@
             "orientation": "forward",
             "start": 5818,
             "end": 5896,
-            "distance": 0.46153846153846145,
+            "distance": 0.5769230769230769,
             "protein": "MAGRSGDSDEDLLKTVRLIKFLYQSS",
             "aminoacids": "MAGRSGDSDEDLLKTVRLIKFLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAGACAGTCAGACTCATCAAGTTTCTCTATCAAAGCAGT"
@@ -177,8 +177,8 @@
             "orientation": "forward",
             "start": 5910,
             "end": 6156,
-            "distance": 1.809876543209876,
-            "protein": "MQPIQIAIVALVVAIIIAIVV",
+            "distance": 0.7060975609756097,
+            "protein": "SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL",
             "aminoacids": "MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*",
             "nucleotides": "ATGCAACCTATACAAATAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGTGTGATCCATAGTAATCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGTTAATTGATAGACTAATAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAG"
         },
@@ -186,18 +186,18 @@
             "name": "env",
             "orientation": "forward",
             "start": 6070,
-            "end": 8656,
-            "distance": 0.4873684210526319,
+            "end": 8683,
+            "distance": 0.0867990654205606,
             "protein": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL",
-            "aminoacids": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*",
-            "nucleotides": "ATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAGGAAGCAACCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATGCAGAGGTACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTAGTTTAAAGTGCACTGATTTGGGGAATGCTACTAATACCAATAGTAGTAATACCAATAGTAGTAGCGGGGAAATGATGATGGAGAAAGGAGAGATAAAAAACTGCTCTTTCAATATCAGCACAAGCATAAGAAATAAGGTGCAGAAAGAATATGCATTCTTTTATAAACTTGATATAGTACCAATAGATAATGATACTACCAGCTATACGTTGACAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAATGTAATAATAAGACGTTCAATGGAACAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGATGTAGTAATTAGATCTGCCAATTTCACAGACAATGCTAAAACCATAATAGTACAGCTGAACCAATCTGTAGAAATTAATTGTACAAGACCCAACAACAATACAAGAAAAAGTATCCGTATCCAGAGAGGACCAGGGAGAGCATTTGTTACAATAGGAAAAATAGGAAATATGAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGCCACTTTAAAACAGATAGCTAGCAAATTAAGAGAACAATTTGGAAATAATAAAACAATAATCTTTAAGCAATCCTCAGGAGGGGACCCAGAAATTGTAACGCACAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAACACAACTGTTTAATAGTACTTGGTTTAATAGTACTTGGAGTACTGAAGGGTCAAATAACACTGAAGGAAGTGACACAATCACACTCCCATGCAGAATAAAACAATTTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGCGGACAAATTAGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGTAATAACAACAATGGGTCCGAGATCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGCTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGAATAACATGACCTGGATGGAGTGGGACAGAGAAATTAACAATTACACAAGCTTAATACACTCCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTAACATAACAAATTGGCTGTGGTATATAAAATTATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAGTGCTGTTAGCTTGCTCAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAGGAGCTTATAGAGCTATTCGCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGATTTTGCTATAA"
+            "aminoacids": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*DGWQVVKK*",
+            "nucleotides": "ATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAGGAAGCAACCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATGCAGAGGTACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTAGTTTAAAGTGCACTGATTTGGGGAATGCTACTAATACCAATAGTAGTAATACCAATAGTAGTAGCGGGGAAATGATGATGGAGAAAGGAGAGATAAAAAACTGCTCTTTCAATATCAGCACAAGCATAAGAAATAAGGTGCAGAAAGAATATGCATTCTTTTATAAACTTGATATAGTACCAATAGATAATGATACTACCAGCTATACGTTGACAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAATGTAATAATAAGACGTTCAATGGAACAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGATGTAGTAATTAGATCTGCCAATTTCACAGACAATGCTAAAACCATAATAGTACAGCTGAACCAATCTGTAGAAATTAATTGTACAAGACCCAACAACAATACAAGAAAAAGTATCCGTATCCAGAGAGGACCAGGGAGAGCATTTGTTACAATAGGAAAAATAGGAAATATGAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGCCACTTTAAAACAGATAGCTAGCAAATTAAGAGAACAATTTGGAAATAATAAAACAATAATCTTTAAGCAATCCTCAGGAGGGGACCCAGAAATTGTAACGCACAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAACACAACTGTTTAATAGTACTTGGTTTAATAGTACTTGGAGTACTGAAGGGTCAAATAACACTGAAGGAAGTGACACAATCACACTCCCATGCAGAATAAAACAATTTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGCGGACAAATTAGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGTAATAACAACAATGGGTCCGAGATCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGCTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGAATAACATGACCTGGATGGAGTGGGACAGAGAAATTAACAATTACACAAGCTTAATACACTCCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTAACATAACAAATTGGCTGTGGTATATAAAATTATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAGTGCTGTTAGCTTGCTCAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAGGAGCTTATAGAGCTATTCGCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGATTTTGCTATAAGATGGGTGGCAAGTGGTCAAAAAGTAG"
         },
         {
             "name": "tat_exon2",
             "orientation": "forward",
             "start": 8237,
             "end": 8333,
-            "distance": 1.243333333333333,
+            "distance": 0.19999999999999996,
             "protein": "RPTSQTRGDPTGPKE",
             "aminoacids": "RPTSQTRGDPTGPKE*KKKVERETETDPFD**",
             "nucleotides": "AGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGA"
@@ -207,7 +207,7 @@
             "orientation": "forward",
             "start": 8238,
             "end": 8514,
-            "distance": 0.4945054945054945,
+            "distance": 0.16483516483516492,
             "protein": "DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE",
             "aminoacids": "DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*",
             "nucleotides": "GACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAG"
@@ -217,7 +217,7 @@
             "orientation": "forward",
             "start": 8657,
             "end": 9278,
-            "distance": 0.5230392156862744,
+            "distance": 0.16991869918698432,
             "protein": "MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC",
             "aminoacids": "MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*",
             "nucleotides": "ATGGGTGGCAAGTGGTCAAAAAGTAGTGTGATTGGATGGCCTACTGTAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGCTTGTGCCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTCACACCTCAGGTACCTTTAAGACCAATGACTTACAAGGCAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAGAAGACAAGATATCCTTGATCTGTGGATCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATCCATTGACCTTTGGATGGTGCTACAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGAGGCCAATAAAGGAGAGAACACCAGCTTGTTACACCCTGTGAGCCTGCATGGAATGGATGACCCTGAGAGAGAAGTGTTAGAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTACTTCAAGAACTGCTGA"
@@ -788,48 +788,48 @@
             "name": "gag",
             "orientation": "forward",
             "start": 777,
-            "end": 2286,
-            "distance": 0.2522000000000002,
+            "end": 2292,
+            "distance": 0.1894,
             "protein": "MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGACAAGTGGGAAAAAATTCGGTTGAGGCCAGGGGGAAAGAAAAAATATAGATTAAAGCATATCGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAACCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATAATGGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTGTATAATACAGTAGCAACCCTCTATTGTGTACATCAAAGGATAGAGGTAAAAGACACCAAGGAAGCTTTAGAGAAGGTAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGGCGCAGGAAACAGCAGTCAGACCAGCACCAGCCAAAATTACCCTATAGTACAGAACATTCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTCTCAGCACTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTACATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAGCCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACTAATAATCCACCTATCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCCACCAGCATTCTAGACATAAGACAAGGACCAAAGGAGCCCTTTAGAGACTATGTAGATCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTAGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGTCCAGCAGCTACACTAGAGGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGTCATAAAGCAAGAGTTTTAGCGGAAGCAATGAGCCAAGCAACAAATTCAGCTGCCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAAAGTGTTAAGTGTTTTAATTGCGGCAAAGATGGGCACATAGCAAAAAATTGCAGGGCCCCTAGAAGAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGATTGTCCAGAGAGACAGGCTAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAACAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGAAGATAGACCAGGACCTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
+            "aminoacids": "MGARASVLSGGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQIMGQLQPALQTGSEELRSLYNTVATLYCVHQRIEVKDTKEALEKVEEEQNKSKKKAQQAAAGAGNSSQTSTSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQATNSAAIMMQRGNFRNQRKSVKCFNCGKDGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTTPSQKQEKIDQDLYPLASLKSLFGNDPSSQ*R*",
+            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGACAAGTGGGAAAAAATTCGGTTGAGGCCAGGGGGAAAGAAAAAATATAGATTAAAGCATATCGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAACCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATAATGGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTGTATAATACAGTAGCAACCCTCTATTGTGTACATCAAAGGATAGAGGTAAAAGACACCAAGGAAGCTTTAGAGAAGGTAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGGCGCAGGAAACAGCAGTCAGACCAGCACCAGCCAAAATTACCCTATAGTACAGAACATTCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTCTCAGCACTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTACATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAGCCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACTAATAATCCACCTATCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCCACCAGCATTCTAGACATAAGACAAGGACCAAAGGAGCCCTTTAGAGACTATGTAGATCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTAGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGTCCAGCAGCTACACTAGAGGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGTCATAAAGCAAGAGTTTTAGCGGAAGCAATGAGCCAAGCAACAAATTCAGCTGCCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAAAGTGTTAAGTGTTTTAATTGCGGCAAAGATGGGCACATAGCAAAAAATTGCAGGGCCCCTAGAAGAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGATTGTCCAGAGAGACAGGCTAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAACAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGAAGATAGACCAGGACCTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGGTAG"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 2078,
-            "end": 5141,
-            "distance": 0.23928215353938187,
+            "end": 5090,
+            "distance": 0.13958125623130613,
             "protein": "FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*KMAQFSKTPYIYFRES*",
-            "nucleotides": "TTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAACAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGAAGATAGACCAGGACCTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGGTAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATGAGTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAAATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGCACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATAGGGCCTGAGAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGACTTCAGAGAACTAAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCCTATTTTTCAGTTCCCTTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGGTTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAACCTTATAGAAAACAAAATCCAAACATAGTTATATATCAATACATGGATGATTTGTATGTAGGATCTGACCTAGAAATAGGGCAGCATAGAATAAAAATAGAAGAACTGAGACAACATCTGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGGTATGAACTCCATCCTGACAAGTGGACAGTACAGCCTATAGCGCTGCCAGAAAAAGAAAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAACTGGGCAAGTCAGATCTACCCAGGAATTAAAGTAAGGCAATTATGTAAACTACTTAGGGGAGCCAAAGCACTAACAGAAGTAATACCACTAACAAAAGAAGCAGAGCTAGAATTAGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCAGTGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAACAATTGACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTGATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAAGAAACATGGGAAGCATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAAACTAAATCAGGAAAAGCAGGATATGTTACTAATAGAGGAAGACAAAAAGTTATCCCCCTAACTGACACAACAAATCAGAAGACTGAGTTACATGCAATTTATCTAGCTTTGCAAGATTCGGGATTAGAAGTAAATATAGTAACAGACTCACAGTATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGGTCTATCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTGTTTTTAGATGGAATAGATAAGGCCCAAGAAGACCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTGGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTCATTCCAGCAGAGACAGGGCAGGAAGCAGCATACTTTATTTTAAAATTAGCAGGACGATGGCCAGTAGCAACAATACATACAGACAATGGCAGCAATTTCACCAGTGCTACAGTTAAGGCCGCCTGCTGGTGGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAACAATGAATTGAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACGTAATAGCAACAGACTTACAAACTAAAGAACTACAAAAACAAATTACAAAAATTCAACATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGAAATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATTATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAAGATGGCACAGTTTAGTAAAACACCATATATATATTTCAGGGAAAGCTAG"
+            "aminoacids": "FFRENLAFPQGEAREFSSEQTRANSPTRGELQVWGGDNNSLSEAGEDRPGPVSFSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPYRKQNPNIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIALPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVIPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTNRGRQKVIPLTDTTNQKTELHAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVATIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDVIATDLQTKELQKQITKIQHFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
+            "nucleotides": "TTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAACAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGAAGATAGACCAGGACCTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGGTAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATGAGTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAAATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGCACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATAGGGCCTGAGAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGACTTCAGAGAACTAAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCCTATTTTTCAGTTCCCTTAGACAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGGTTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAACCTTATAGAAAACAAAATCCAAACATAGTTATATATCAATACATGGATGATTTGTATGTAGGATCTGACCTAGAAATAGGGCAGCATAGAATAAAAATAGAAGAACTGAGACAACATCTGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGGTATGAACTCCATCCTGACAAGTGGACAGTACAGCCTATAGCGCTGCCAGAAAAAGAAAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAACTGGGCAAGTCAGATCTACCCAGGAATTAAAGTAAGGCAATTATGTAAACTACTTAGGGGAGCCAAAGCACTAACAGAAGTAATACCACTAACAAAAGAAGCAGAGCTAGAATTAGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGAGCAAGGCCAGTGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGGGGTGCCCACACTAATGATGTAAAACAATTGACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTGATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAAGAAACATGGGAAGCATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAAACTAAATCAGGAAAAGCAGGATATGTTACTAATAGAGGAAGACAAAAAGTTATCCCCCTAACTGACACAACAAATCAGAAGACTGAGTTACATGCAATTTATCTAGCTTTGCAAGATTCGGGATTAGAAGTAAATATAGTAACAGACTCACAGTATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGGTCTATCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTGTTTTTAGATGGAATAGATAAGGCCCAAGAAGACCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTGGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTCATTCCAGCAGAGACAGGGCAGGAAGCAGCATACTTTATTTTAAAATTAGCAGGACGATGGCCAGTAGCAACAATACATACAGACAATGGCAGCAATTTCACCAGTGCTACAGTTAAGGCCGCCTGCTGGTGGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAACAATGAATTGAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACGTAATAGCAACAGACTTACAAACTAAAGAACTACAAAAACAAATTACAAAAATTCAACATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGAAATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATTATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
         },
         {
             "name": "vif",
             "orientation": "forward",
             "start": 5034,
-            "end": 5613,
-            "distance": 0.5416666666666667,
+            "end": 5622,
+            "distance": 0.40104166666666674,
             "protein": "MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAAGATGGCACAGTTTAGTAAAACACCATATATATATTTCAGGGAAAGCTAGAGGATGGGTTTATAAACATCACTATGAAAACACTCATCCAAGAATAAGTTCAAAAGTATACATCCCACTAGGGGAAGCTAGACTGGCAGTAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAAGGAATATAGCACACAAGTAGACCCTAACCTAGCAGACCAACTAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGTCATATTAGGACATAGAGTTAGCCCTAGGTGTGAATATCAAGCAGGACATAACAAGGTAGGATCTTTACAGTACTTGGCACTAACAGCATTAGTAACACCAAAAAAGACAAAGCCACCTTTGCCTAGTATTACGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAGAACCAAGGGCCACCGAGGGAACCATACAATGAATGGGCACTAG"
+            "aminoacids": "MENRWQVMIVWQVDRMRIRRWHSLVKHHIYISGKARGWVYKHHYENTHPRISSKVYIPLGEARLAVTTYWGLHTGERDWHLGQGVSIEWRKKEYSTQVDPNLADQLIHLYYFDCFSESAIRNVILGHRVSPRCEYQAGHNKVGSLQYLALTALVTPKKTKPPLPSITKLTEDRWNKPQRTKGHRGNHTMNGH*SF*",
+            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAAGATGGCACAGTTTAGTAAAACACCATATATATATTTCAGGGAAAGCTAGAGGATGGGTTTATAAACATCACTATGAAAACACTCATCCAAGAATAAGTTCAAAAGTATACATCCCACTAGGGGAAGCTAGACTGGCAGTAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAAGGAATATAGCACACAAGTAGACCCTAACCTAGCAGACCAACTAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGTCATATTAGGACATAGAGTTAGCCCTAGGTGTGAATATCAAGCAGGACATAACAAGGTAGGATCTTTACAGTACTTGGCACTAACAGCATTAGTAACACCAAAAAAGACAAAGCCACCTTTGCCTAGTATTACGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAGAACCAAGGGCCACCGAGGGAACCATACAATGAATGGGCACTAGAGCTTTTAG"
         },
         {
             "name": "vpr",
             "orientation": "forward",
             "start": 5552,
-            "end": 5843,
-            "distance": 0.34375,
+            "end": 5846,
+            "distance": 0.5576923076923082,
             "protein": "MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS",
-            "aminoacids": "MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS*",
-            "nucleotides": "ATGGAACAAGCCCCAGAGAACCAAGGGCCACCGAGGGAACCATACAATGAATGGGCACTAGAGCTTTTAGAGGAGCTTAAGAGTGAAGCTGTTAGACATTTTCCTAGGATGTGGCTCCATGGCTTAGGGCAACACATCTATGAGACTTATGGGGATACTTGGACAGGAGTGGAAGCCTTAATAAGAAGTCTGCAACAACTGCTGTTCATTCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGAATTACTCCACAGAGGAGAACAAGAAATGGAGCCAGTAGATCCTAA"
+            "aminoacids": "MEQAPENQGPPREPYNEWALELLEELKSEAVRHFPRMWLHGLGQHIYETYGDTWTGVEALIRSLQQLLFIHFRIGCRHSRIGITPQRRTRNGASRS*S",
+            "nucleotides": "ATGGAACAAGCCCCAGAGAACCAAGGGCCACCGAGGGAACCATACAATGAATGGGCACTAGAGCTTTTAGAGGAGCTTAAGAGTGAAGCTGTTAGACATTTTCCTAGGATGTGGCTCCATGGCTTAGGGCAACACATCTATGAGACTTATGGGGATACTTGGACAGGAGTGGAAGCCTTAATAAGAAGTCTGCAACAACTGCTGTTCATTCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGAATTACTCCACAGAGGAGAACAAGAAATGGAGCCAGTAGATCCTAATCT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5823,
             "end": 6039,
-            "distance": 0.6833333333333336,
+            "distance": 0.45833333333333326,
             "protein": "MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ",
             "aminoacids": "MEPVDPNLEPWKHPGSQPKTACTTCYCKQCCYHCQVCFITKGLGISYGRKKRRQRRGSPQDSQIHQASLSKQ",
             "nucleotides": "ATGGAGCCAGTAGATCCTAATCTAGAGCCCTGGAAGCATCCAGGAAGCCAGCCTAAGACTGCTTGTACCACTTGCTATTGTAAACAGTGTTGCTATCATTGCCAAGTTTGTTTCATAACCAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAACGACGAGGATCTCCTCAAGACAGTCAGATTCATCAAGCTTCTCTATCAAAGCAG"
@@ -839,7 +839,7 @@
             "orientation": "forward",
             "start": 5962,
             "end": 6040,
-            "distance": 1.1153846153846154,
+            "distance": 0.6923076923076923,
             "protein": "MAGRSGDNDEDLLKTVRFIKLLYQSS",
             "aminoacids": "MAGRSGDNDEDLLKTVRFIKLLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAACGACGAGGATCTCCTCAAGACAGTCAGATTCATCAAGCTTCTCTATCAAAGCAGT"
@@ -848,18 +848,18 @@
             "name": "vpu",
             "orientation": "forward",
             "start": 6054,
-            "end": 6390,
-            "distance": 0.9555555555555557,
+            "end": 6300,
+            "distance": 0.552439024390244,
             "protein": "MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL",
-            "aminoacids": "MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL*CYRKIVGYSLLWGTCVERSKHHSILCIRC*",
-            "nucleotides": "ATGCAATCTTTAGCAATATTAGCAATAGTAGCATTAGTAGTAGCAGCCATAATAGCAATAGTTGTGTGGACCATAGTATTCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGTTAATTGATAGAATAAGAGAAAGAGCAGAAGATAGTGGCAATGAGAGTGAAGGGGATCATGAAGAATTATCAGCACTTATGGAGATGGGGCATCATGCTCCTTGGGATGTTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTTACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAAACACCACTCTATTCTGTGCATCAGATGCTAA"
+            "aminoacids": "MQSLAILAIVALVVAAIIAIVVWTIVFIEYRKILRQRKIDRLIDRIRERAEDSGNESEGDHEELSALMEMGHHAPWDVDDL*",
+            "nucleotides": "ATGCAATCTTTAGCAATATTAGCAATAGTAGCATTAGTAGTAGCAGCCATAATAGCAATAGTTGTGTGGACCATAGTATTCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGTTAATTGATAGAATAAGAGAAAGAGCAGAAGATAGTGGCAATGAGAGTGAAGGGGATCATGAAGAATTATCAGCACTTATGGAGATGGGGCATCATGCTCCTTGGGATGTTGATGATCTGTAG"
         },
         {
             "name": "env",
             "orientation": "forward",
             "start": 6217,
             "end": 8800,
-            "distance": 0.7447337278106514,
+            "distance": 0.5558411214953274,
             "protein": "MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ",
             "aminoacids": "MRVKGIMKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTKLEINSTKKTNSTNNGTNINATDDSWGEMKNCSFNTTASIRDKVQREFALFYKLDIVPIDNDDINYRLISCNTSVLTQACPKVSFEPIPIHYCAPAGFAILKCRDKNFNGTGQCKNVSTVQCTHGIRPVVSTQLLFNGSLAEEEVVIKSENITDNTKTIIVQLNASVAIVCTRPNNNTRKSIPIGPGRAFYAAGDIIGDIRRAHCILNKTTWDNTIEQVAKKLREQFENKTIVFSESSGGDPEITMISFNCGGEFFYCNSVQLFNSTWHNNGSSTTGSSSSEGNITLPCKIKQIINMWQEVGKAMYAPPIRGPISCESNITGLLLTRDGGNDANGNNTETFRPGGGNMRDNWRSELYRYKVVKIEPLGVAPTRAQRRVVQREKRAVGLGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICNTAVPWNTSWSNKSLDDIWHNMTWMEWEREIDNYTNIIYSLIEASQTQQEKNEQELLELDKWASLWNWFSISNWLWYIKIFIMIVGGLVGLRIVFTILSIVNRVRKGYSPLSFQTHLPAQRGPDRPEGTGDEGGEQDRDRSTHLVDGFLAIIWVDLRNLCLFLYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWRRELKNSAVSLLNATAIAVAEGTDRVIEGLRRAFRAIIHIPRRIRQGLERALQ*",
             "nucleotides": "ATGAGAGTGAAGGGGATCATGAAGAATTATCAGCACTTATGGAGATGGGGCATCATGCTCCTTGGGATGTTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTTACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAAACACCACTCTATTCTGTGCATCAGATGCTAAAGCATATGATACAGAGGCACATAATGTTTGGGCCACACATGCCTGTGTACCTACAGACCCCAACCCACAAGAAATAGGATTGGAAAATGTGACAGAAAATTTTAACATGTGGAAAAATAACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTACATTGCACTAAGTTGGAGATTAATAGCACTAAGAAGACTAATAGCACTAATAATGGTACTAACATCAATGCCACTGATGATAGTTGGGGGGAAATGAAAAACTGCTCTTTCAATACCACTGCAAGCATAAGAGATAAGGTACAGAGAGAATTTGCGCTTTTTTATAAACTTGATATAGTACCAATAGATAATGATGATATCAACTATAGGTTAATAAGTTGTAACACCTCAGTCCTTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAGAGATAAAAATTTCAATGGAACAGGACAATGTAAAAATGTCAGCACAGTGCAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGTTCAATGGCAGTCTAGCAGAAGAAGAGGTAGTAATTAAATCTGAAAATATCACAGACAATACTAAAACTATAATAGTACAGCTGAATGCATCTGTAGCAATTGTTTGTACAAGACCCAACAACAATACAAGAAAAAGTATACCTATAGGGCCAGGGAGAGCGTTTTATGCAGCAGGAGATATAATAGGAGACATAAGACGAGCACACTGTATCCTTAACAAAACAACATGGGATAACACAATAGAACAGGTAGCTAAAAAATTAAGAGAACAATTTGAGAATAAGACAATAGTCTTTAGTGAATCCTCGGGAGGGGACCCAGAAATTACAATGATTAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAGTACAACTGTTTAATAGTACTTGGCATAATAATGGGAGTAGTACTACAGGGTCAAGTAGCAGTGAAGGCAATATCACACTCCCATGCAAAATAAAACAAATTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGAGGACCAATTAGCTGCGAGTCAAATATTACAGGGTTGCTACTAACAAGAGATGGTGGGAATGACGCTAACGGGAACAACACCGAGACCTTCAGACCTGGAGGAGGAAATATGAGGGACAATTGGCGAAGTGAATTATATAGATACAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAGGGCACAGAGAAGAGTGGTACAGAGAGAAAAAAGAGCAGTGGGTCTCGGAGCCTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATAACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATATGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGCTTTGGGGTTGCTCTGGAAAACTCATCTGCAACACTGCTGTGCCTTGGAATACTAGTTGGAGTAACAAATCTCTGGATGATATTTGGCATAACATGACCTGGATGGAGTGGGAAAGAGAAATTGACAATTACACAAACATAATATACAGCTTAATTGAGGCATCGCAAACCCAGCAAGAAAAGAATGAACAAGAATTACTAGAATTAGACAAATGGGCAAGTCTGTGGAATTGGTTTAGCATATCAAACTGGCTGTGGTACATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTACTATACTTTCTATAGTGAATAGAGTTAGGAAGGGATACTCACCATTATCGTTTCAGACCCACCTCCCAGCCCAGAGGGGACCCGACAGGCCCGAAGGAACCGGAGACGAAGGTGGAGAGCAAGACAGAGACAGATCCACTCACTTAGTGGATGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAACCTGTGCCTCTTCCTCTACCACCGCTTGAGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATACTGGTGGAACCTTCTGCAGTATTGGAGGCGGGAACTAAAGAATAGTGCTGTTAGCTTGCTTAATGCCACAGCCATAGCAGTAGCTGAGGGGACAGATAGAGTTATAGAAGGATTGCGCAGAGCTTTTAGAGCTATTATCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGAGCTTTGCAATAA"
@@ -869,7 +869,7 @@
             "orientation": "forward",
             "start": 8381,
             "end": 8489,
-            "distance": 1.1392857142857142,
+            "distance": 0.28666666666666596,
             "protein": "RPTSQPRGDPTGPKEPETKVESKTETDPLT",
             "aminoacids": "RPTSQPRGDPTGPKEPETKVESKTETDPLT*WMDS*",
             "nucleotides": "AGACCCACCTCCCAGCCCAGAGGGGACCCGACAGGCCCGAAGGAACCGGAGACGAAGGTGGAGAGCAAGACAGAGACAGATCCACTCACTTAGTGGATGGATTCTTAG"
@@ -879,7 +879,7 @@
             "orientation": "forward",
             "start": 8382,
             "end": 8658,
-            "distance": 0.8681318681318682,
+            "distance": 0.4505494505494505,
             "protein": "DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE",
             "aminoacids": "DPPPSPEGTRQARRNRRRRWRARQRQIHSLSGWILSNYLGRPAEPVPLPLPPLERLTLDCSEDCGTSGTQGVGSPQILVEPSAVLEAGTKE*",
             "nucleotides": "GACCCACCTCCCAGCCCAGAGGGGACCCGACAGGCCCGAAGGAACCGGAGACGAAGGTGGAGAGCAAGACAGAGACAGATCCACTCACTTAGTGGATGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAACCTGTGCCTCTTCCTCTACCACCGCTTGAGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATACTGGTGGAACCTTCTGCAGTATTGGAGGCGGGAACTAAAGAATAG"
@@ -889,7 +889,7 @@
             "orientation": "forward",
             "start": 8801,
             "end": 9425,
-            "distance": 0.5563380281690138,
+            "distance": 0.6089430894308867,
             "protein": "MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN",
             "aminoacids": "MGGKWSKCSIVGWPTVRERIRRAEPAAEGVGAVSRDLEKHGAITSSNANNADCTWLEAQKEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGIIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPERVEEENKRENRCLLHPMSQHGMDDPEKEVLQWRFDSRLAFHHVARELHPEYYKN*NC*",
             "nucleotides": "ATGGGTGGTAAATGGTCAAAATGTAGTATAGTTGGATGGCCTACTGTAAGGGAAAGAATAAGACGAGCAGAGCCAGCAGCAGAAGGGGTGGGAGCAGTATCTCGAGACCTGGAAAAGCATGGAGCAATCACAAGTAGCAATGCTAACAATGCTGATTGTACCTGGCTGGAAGCCCAAAAAGAAGAGGAGGAGGTAGGCTTTCCAGTCAGGCCTCAGGTACCCTTAAGACCAATGACTTACAAGGCAGCCTTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGATAATTTACTCCCAAAAAAGACAAGATATTCTTGATCTGTGGGTCTACAACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGACTAGATTTCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGAGAGGGTAGAAGAGGAGAATAAAAGAGAGAACCGCTGCTTGTTACACCCTATGAGCCAGCATGGGATGGATGACCCAGAGAAAGAAGTGCTACAGTGGAGGTTTGACAGCCGCCTAGCCTTTCACCACGTAGCCAGAGAGCTGCATCCGGAGTACTATAAGAACTAGAACTGCTGA"
@@ -1237,7 +1237,7 @@
             "orientation": "forward",
             "start": 176,
             "end": 1685,
-            "distance": 0.34274509803921616,
+            "distance": 0.22580000000000022,
             "protein": "MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP",
             "aminoacids": "MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHTPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRKNVKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*",
             "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGCGGAGAATTAGATAGATGGGAAAAAATTTACCTAAGGCCAGGGGGAAAGAAAAAATATAGATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTCAACCCTGGCCTGTTAGAGTCATCAGAAGGCTGCAGGCAAATTCTGGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAGTCCTCTATTGTGTACATCAAAGGATAAATGTAAAAGACACCAAGGAAGCTCTAGACAAAATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAACAAGCAGCAGCTGACACAGGAAACAGCAGCAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTACAGGGGCAAATGGTACATCAACCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAATAGAAGAAAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCACTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAGATGTTAAAAGAAACCATCAATGATGAGGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGCCCTATTGCACCAGGCCAGATGAGGGAACCAAGGGGAAGTGACATAGCAGGAACCACTAGTACCCTTCAGGAACAAATAGGATGGATGACACATACTCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGGTTAAATAAAATAGTAAGAATGTATAGCCCTGTCAGCATTTTGGACATAAGACAAGGACCAAAGGAACCCTTTAGGGATTATGTAGACCGGTTCTATAAAACTCTAAGGGCTGAGCAAGCGTCACAGGATGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAATCCAGATTGTAAGACCATTTTAAAAGCATTAGGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGGGGACCCGGCCACAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAAATCAGCCTCCATAATGGTGCAGGGAGGCAATTTTAGGAACCAAAGAAAGAATGTTAAGTGTTTCAATTGTGGCAAAGAAGGACACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAGGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATTTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGGGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAA"
@@ -1246,18 +1246,18 @@
             "name": "pol",
             "orientation": "forward",
             "start": 1477,
-            "end": 4489,
-            "distance": 0.25557749259624885,
+            "end": 4567,
+            "distance": 0.21934197407776668,
             "protein": "FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*",
-            "nucleotides": "TTTTTTAGGGAAGATTTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGGGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAGGAGGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAGAAATTTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCAGTCAACATAATTGGAAGAAATCTGTTGACCCAGCTTGGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAGGCATTAATAGAAATTTGTGCAGAAATGGAAAAGGAAGGGAAAATTACAAAAATTGGGCCTGAGAATCCATATAATACTCCAGTGTTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCCGAGAACTTAATAAGAGAACACAAGACTTCTGGGAAGTTCAACTAGGAATACCACATCCCGCAGGGTTAAAAAGGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCATATTTTTCAGTTCCTTTAGACAAAGACTTCAGAAAGTATACTGCATTTACCATACCCAGTATAAACAATGAGGCACCAGGAGTTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAGGAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGAGCAGCACAGAACAAAAATAGAGGAACTGAGACAACATCTGTTGGGGTGGGGACTCACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGACAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAGTTGAATTGGGCAAGCCAGATCTATCCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCATATTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAGCAGGGGGGAGACCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCCTAGAAGCCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTACCTATACAAAAGGAAACATGGGAAATGTGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAATAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAGACTAAATTAGGAAAAGCAGGGTATGTTACGGACAGAGGAAGACAAAAGGTTGTCTCCCTAATGGACACAACAAATCAGAGGACTGAGTTACACGCAATTCATCTAGCTTTGCAGGATTCAGGATCAACAGTAAACATAGTGACAGACTCACAATATGCCTTAGGGATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGCTAATAAAAAAGGAAAAGATTTACCTGGCATGGGTCCCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTAATGGAATCAGAAAAATACTATTTCTGGATGGAATAGATAAGGCCCAAGAAGAACATGAAAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAGGAGAACCTATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATACATAGAAGCAGAAGTTATTGCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTGGCAGGAAGATGGCCAGTAAAAATAATACATACAGACAATGGCAGCAATTTCACCAGCACTACGGTTAAGGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGTATTCCCTACAATCCTCAAAGTCAAGGAGTAGTAGAATCTATGAATAATGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTTCAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGAACCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGATATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCCTTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
+            "aminoacids": "FFREDLAFPQGEAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSNGIRKILFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*NMEQFSKTPYAYFKESSEMGLQTSL*",
+            "nucleotides": "TTTTTTAGGGAAGATTTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGGGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAGGAGGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAGAAATTTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCAGTCAACATAATTGGAAGAAATCTGTTGACCCAGCTTGGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAGGCATTAATAGAAATTTGTGCAGAAATGGAAAAGGAAGGGAAAATTACAAAAATTGGGCCTGAGAATCCATATAATACTCCAGTGTTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCCGAGAACTTAATAAGAGAACACAAGACTTCTGGGAAGTTCAACTAGGAATACCACATCCCGCAGGGTTAAAAAGGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCATATTTTTCAGTTCCTTTAGACAAAGACTTCAGAAAGTATACTGCATTTACCATACCCAGTATAAACAATGAGGCACCAGGAGTTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAGGAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGAGCAGCACAGAACAAAAATAGAGGAACTGAGACAACATCTGTTGGGGTGGGGACTCACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGACAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAGTTGAATTGGGCAAGCCAGATCTATCCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCATATTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAGCAGGGGGGAGACCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCCTAGAAGCCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTACCTATACAAAAGGAAACATGGGAAATGTGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAATAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAGACTAAATTAGGAAAAGCAGGGTATGTTACGGACAGAGGAAGACAAAAGGTTGTCTCCCTAATGGACACAACAAATCAGAGGACTGAGTTACACGCAATTCATCTAGCTTTGCAGGATTCAGGATCAACAGTAAACATAGTGACAGACTCACAATATGCCTTAGGGATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGCTAATAAAAAAGGAAAAGATTTACCTGGCATGGGTCCCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTAATGGAATCAGAAAAATACTATTTCTGGATGGAATAGATAAGGCCCAAGAAGAACATGAAAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAGGAGAACCTATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATACATAGAAGCAGAAGTTATTGCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTGGCAGGAAGATGGCCAGTAAAAATAATACATACAGACAATGGCAGCAATTTCACCAGCACTACGGTTAAGGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGTATTCCCTACAATCCTCAAAGTCAAGGAGTAGTAGAATCTATGAATAATGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTTCAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGAACCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGATATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCCTTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATGGGTTTACAGACATCACTATGA"
         },
         {
             "name": "vif",
             "orientation": "forward",
             "start": 4433,
             "end": 5012,
-            "distance": 0.46354166666666674,
+            "distance": 0.38020833333333326,
             "protein": "MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATGGGTTTACAGACATCACTATGAAAGCCATAATCCAAAAACAAGTTCAGAAGTACACATCCCATTAGGGGAAGCAAGATTGGTAATAAAAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGCCAGGGAGTATCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGGCCTGGCAGACCAACTAATTCACCTGTATTATTTTGATTGTTTTTCAGAATCTGCTATAAGGAATGCCATATTAGGACATAGAGTTAGTCCTAGGTGTGAATATCAGGCAGGACATAACAAGGTAGGATCCCTACAATACTTGGCATTAACAGCATTAATAACACCAAAAAGGAGAAAGCCACCTTTGCCCAGTGTTACAAAATTAACAGAGGACAGATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAG"
@@ -1266,18 +1266,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 4951,
-            "end": 5242,
-            "distance": 0.39583333333333326,
+            "end": 5245,
+            "distance": 0.5192307692307698,
             "protein": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS",
-            "aminoacids": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*",
-            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAGCTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGGGGTGGAAGACATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
+            "aminoacids": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEDIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*L",
+            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAGCTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGGGGTGGAAGACATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAGCTT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5222,
             "end": 5441,
-            "distance": 0.5416666666666667,
+            "distance": 0.5972222222222223,
             "protein": "MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ",
             "aminoacids": "MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*",
             "nucleotides": "ATGGAGCCAGTAGATCCTAGCTTAGAGCCCTGGAAACATCCAGGAAGTCAACCTATGACTGCTTGTAACAATTGCTATTGTAAACGGTGTTGCTTTCATTGCCAAGTTTGCTTCACAAGAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGTAA"
@@ -1287,7 +1287,7 @@
             "orientation": "forward",
             "start": 5361,
             "end": 5439,
-            "distance": 0.5384615384615385,
+            "distance": 0.6538461538461537,
             "protein": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "aminoacids": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGT"
@@ -1297,7 +1297,7 @@
             "orientation": "forward",
             "start": 5453,
             "end": 5699,
-            "distance": 0.4814814814814814,
+            "distance": 0.780487804878049,
             "protein": "MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM",
             "aminoacids": "MHILEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSAIVEMGHLVPWDGDDM*",
             "nucleotides": "ATGCATATCTTAGAAATAGCAGCAATAGTAGGATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTGGTCTATAGTATTAATAGAATATAGGAAAATTTTAAGACAAAGGAAAATAGACAGGTTAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAAAGTGACGGGGACCAGGAGGAATTATCAGCAATTGTGGAGATGGGGCATCTTGTTCCTTGGGATGGTGATGATATGTAG"
@@ -1307,7 +1307,7 @@
             "orientation": "forward",
             "start": 5616,
             "end": 8217,
-            "distance": 0.545964912280702,
+            "distance": 0.5768691588785053,
             "protein": "MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL",
             "aminoacids": "MKVTGTRRNYQQLWRWGILFLGMVMICSARNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNNTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAMGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWNPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*",
             "nucleotides": "ATGAAAGTGACGGGGACCAGGAGGAATTATCAGCAATTGTGGAGATGGGGCATCTTGTTCCTTGGGATGGTGATGATATGTAGTGCCAGAAACTTGTGGGTCACAGTCTATTATGGGGTACCTGTATGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGAGACAGAGAAGCATAATGTTTGGGCAACCCATGCCTGTGTACCCACAGACCCCAGCCCACAGGAAGTAGCATTGGAAAATGTGACAGAAACATTTAACATGTGGAAAAATGACATGGTAGAGCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTGAAACTAACCCCACTCTGTGTTACTTTAAATTGCACTGATAATTTAAATCTAAATCGCCCTAACAATAATACTTGTAGTAATAATACTAATTATAATATAACGGAAAAAGGAGAAATAAAAAACTGCTCTTTCAATGTCACCACAGGAATAAGAGATAGGGTGACAAAAGAACATGCACTTTTCTATAAACTTGATGTAGTACCAATAGATGAAGGTAGTGGAAATACTACGGGCAAATATAGGATGATAAATTGTAACACCTCAGTCATTACACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTTTTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAAAGATAAGAAATTCAATGGAACAGGAGAATGTAGAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGCTGAACGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGCCAATCTCTCGAACAATGCTAAAACCATAATAGTACAGCTGAATAAATCTGTAAAAATTAATTGTACAAGACCCAACAATAATACAAGAAGAAGTATACACATAGGACCAGGGAGGGCATTTTATGGAACAGACATAATAGGGGATATAAGACAAGCGCATTGTAACATTAGTGGGAAAGATTGGAATGACACTTTAAAACAGATAGTTATAAAATTAAAAGAAAAATTTGAGAATAAAACAATAGTCTTTACTCAATCCTCAGGAGGGGACCCAGAGATAGTGATGCATAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACAACACAGCTGTTTAATAGTACTTGGAATAATAATACTTGGAATGGTACTGATAATTGGAATGGTACTGAATCAAATAGCACTATCACACTCCCATGCAGAATAAAACAAATTATAAACTTGTGGCAGGAAGTAGGAAGAGCAATGTATGCCCCTCCCATCCAAGGGCAAATTAGATGTTCATCAAATATTACAGGGCTGCTGCTAGTAAGAGATGGTGGAAGCAACAATAGTAGTAATGATACAGAGACCTTCAGGCCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTCAAAATTGAACCATTAGGAATAGCACCCACCCATGCAAAGAGAAGAGTGGTGCAAAGGGAAAAAAGAGCAATGGGACTTGGAGCTTTCTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAGTGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAAAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTTTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTAATGTGCCCTGGAATATTAGTTGGAACCCTAGATGGAATAGATCTCTAGATGAGATTTGGACTAACATGACCTGGAAGCAGTGGGAAAAGGAAATTGACAATTACACAGACATAATATATAACTTAATTGAACAATCACAGAACCAACAAGAACAGAATGAACAAGACTTATTGGCATTAGATAAGTGGGCAAGTTTGTGGAATTGGTTTGACATTACACAGTGGCTATGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGATAGGTTTAAGAATAGTTTTTACTATACTGTCTATAGTAAATAGAGTTAGGCAGGGATACTCACCATTGTCATTGCAGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAGTGCAGTTAGCTTGCTCAACACCACAGCAATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTATTACAAAGAGGCTTTAGAGCTATTCTCCACATACCTACACGAATAAGACAGGGCTTAGAAAGGGCTTTGCTATAA"
@@ -1317,7 +1317,7 @@
             "orientation": "forward",
             "start": 7798,
             "end": 7891,
-            "distance": 0.8,
+            "distance": 0.4866666666666659,
             "protein": "RPSSQPRGDPTGPKEQKKEVERETEAHPRD",
             "aminoacids": "RPSSQPRGDPTGPKEQKKEVERETEAHPRD*",
             "nucleotides": "AGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAG"
@@ -1326,18 +1326,18 @@
             "name": "rev_exon2",
             "orientation": "forward",
             "start": 7799,
-            "end": 8084,
-            "distance": 0.4945054945054945,
+            "end": 8075,
+            "distance": 0.4285714285714286,
             "protein": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE",
-            "aminoacids": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*CS*",
-            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAGTGCAGTTAG"
+            "aminoacids": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*",
+            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAG"
         },
         {
             "name": "nef",
             "orientation": "forward",
             "start": 8218,
             "end": 8866,
-            "distance": 0.6995098039215688,
+            "distance": 0.7959349593495859,
             "protein": "MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC",
             "aminoacids": "MGNKLSRGLRAGWPAIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNTDVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*",
             "nucleotides": "ATGGGTAACAAGTTGTCAAGAGGGCTCAGGGCTGGATGGCCTGCCATAAGGGAGAGAATGAGACGAGCTAGGCCAGTAAGAGAGCCAGAGCCAGCAGCAGCTGGGGTGGGAGCAGCATCTCGAGACCTGGAAAGACATGGAGCACTTACAAGTAGCAATACAGCAGCTACCAATACTGATGTTGCCTGCCTGGAAGCACAACAGGAGGAGGAAGAGGTGGGTTTTCCAGTCAGACCTCAGGTACCTTTAAGGCCAATGACTTACAAGGGAGCTCTAGATATTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGATGGGCTAATTTACTCCAAAAGAAGACAAGACATCCTTGATCTGTGGCTCTACAACACACAAGGCTACTTCCCTGACTGGCAGAACTACACACCAGGGCCAGGAGTCAGATTTCCACTGTGTTTTGGATGGTGCTTCAAGCTAGTACCAGTTGATCCAGATAAGGTAGAAGAGGCCAGTGTAGGAGAGAACAACTGCTTGTTAAGCCCCGAAAACCTGCATGGAATGGAGGACGAACACAGAGAAGTATTGCAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTATTACAAGGACTGCTGACACTGA"
@@ -1573,7 +1573,7 @@
             "orientation": "forward",
             "start": 316,
             "end": 1819,
-            "distance": 0.1918000000000002,
+            "distance": 0.3517171717171721,
             "protein": "MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP",
             "aminoacids": "MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFNTVAVLYCVHQRIEIKDTKEALDKIEEEQNKSKKKTQQAAADPGNSNQVSQNYPIVQNMQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSASVMMQKGNFRSQRKMVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFPQSRTEPTAPPEESFSFGEKTTTPSQKQEPIDQELYPMSSLKSLFGNDP*SQ*",
             "nucleotides": "ATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGACAAATGGGAGAAAATTCGGTTAAGGCCAGGGGGAAAGAAACAATATAAGTTAAAACATATAGTATGGGCAAGCAGGGAACTGGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAGGAACTTAAATCATTATTTAATACAGTAGCAGTCCTCTATTGTGTGCATCAAAGGATAGAGATAAAAGACACCAAGGAAGCTTTAGACAAGATAGAGGAAGAACAAAACAAAAGTAAGAAAAAGACACAGCAAGCAGCAGCTGACCCAGGAAATAGCAACCAGGTCAGCCAAAATTACCCTATAGTGCAGAACATGCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTGAAAGTAGTAGAAGAGAAGGCTTTTAGCCCAGAAGTAATACCCATGTTTTCAGCCTTATCAGAAGGAGCCACCCCACAAGATTTGAACACGATGCTAAACACAGTGGGGGGACATCAAGCAGCTATGCAAATGTTAAAAGAAACTATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCGATTGCACCAGGCCAGATGAGAGAACCGAGGGGAAGTGACATAGCAGGAACCACCAGTACCCTTCAGGAGCAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTACAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGTCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGATCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAGAATGCAAACCCAGATTGTAAGACCATTTTAAAAGCATTAGGTCCAGCAGCTACACTAGAAGAAATGATGACAGCATGCCAGGGAGTGGGAGGACCCGGCCATAAGGCAAGAGTTTTGGCGGAAGCAATGAGCCAAGTAACAAACTCAGCTTCCGTGATGATGCAGAAAGGCAATTTTAGGAGCCAAAGAAAGATGGTTAAGTGTTTCAATTGTGGCAAAGAAGGACACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAGGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCAAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAACTTTCCTCAAAGCAGAACAGAACCAACAGCCCCACCAGAGGAGAGCTTCAGTTTTGGGGAAAAGACAACAACTCCTTCTCAGAAGCAGGAGCCGATAGACCAGGAACTATACCCTATGTCTTCCCTCAAATCACTCTTTGGCAACGACCCTTAGTCACAGTAA"
@@ -1583,7 +1583,7 @@
             "orientation": "forward",
             "start": 1611,
             "end": 4623,
-            "distance": 0.1992023928215354,
+            "distance": 0.26447105788423153,
             "protein": "FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED",
             "aminoacids": "FFRENLAFPQGEARELSSKQNRTNSPTRGELQFWGKDNNSFSEAGADRPGTIPYVFPQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVKQYDQISVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDMVIYQYMDDLYVGSDLEIGQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTEVVPLTEEAELELAENREILKEPVHGVYYDPTKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWESWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKSGKAGYVTDRGRQKVISLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIQKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNIPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVTTIHTDNGPNFTSNAVKAACWWAGVKQEFGIPYNPQSQGVVESMNKQLKQIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAACTTTCCTCAAAGCAGAACAGAACCAACAGCCCCACCAGAGGAGAGCTTCAGTTTTGGGGAAAAGACAACAACTCCTTCTCAGAAGCAGGAGCCGATAGACCAGGAACTATACCCTATGTCTTCCCTCAAATCACTCTTTGGCAACGACCCTTAGTCACAGTAAGGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTGTTAGAAGAAATGAGTCTACCAGGAAGATGGAAGCCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAAACAGTATGATCAGATATCAGTAGAAATTTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCTGTCAATATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGTACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTAAGGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCAATAAAGAAAAAAGACAGTACTAAATGGAGAAAGTTAGTAGATTTTAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACACCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCCTAGATAAAGACTTCAGGAAATATACTGCATTTACCATACCTAGTACAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTACTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAGAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATGGTTATATATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAACTGAGACAACATCTGTTGAAGTGGGGGTTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAACTGCCAGAGAAAGACAGCTGGACTGTCAATGATATACAGAAATTAGTGGGAAAGTTGAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAGGCAGTTATGTAAACTACTTAGAGGAGCCAAGGCGCTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAAATCCTAAAAGAACCAGTGCATGGAGTGTATTATGACCCAACAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGTCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAACTTGAAAACAGGAAAATATGCAAGAACAAGGGGTGCTCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTAATATGGGGAAAGACCCCTAAATTTAGACTACCCATTCAAAAAGAAACATGGGAATCATGGTGGACAGAATATTGGCAAGCCACTTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAAAAAGAACCCATAATAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAAACAAAATCAGGAAAAGCAGGATATGTCACTGACAGAGGAAGACAAAAAGTTATCTCCCTAACTGACACAACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAGGCACAACCAGATAAAAGCGAATCAGAGTTAGTCAATCAAATAATAGAGCAATTAATACAAAAGGAAAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAATTGGGGGAAATGAACAAGTAGATAAATTAGTCAGTTCTGGAATCAGAAAGGTACTATTTTTGGATGGAATAGATAAGGCCCAAGAAGATCATGAAAAATATCACAGTAATTGGAGAGCAATGGCTAGTGACTTTAACATACCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAATTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCTAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGACAGGAAACAGCATACTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAACAACAATACATACAGACAATGGCCCCAACTTCACCAGTAATGCAGTTAAGGCCGCCTGTTGGTGGGCAGGGGTCAAACAAGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTTGTAGAATCTATGAATAAACAATTAAAACAAATTATAGGACAGGTAAGAGAGCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAACTTCTTTGGAAAGGTGAGGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTACCAAGAAGAAAAGCAAAAATTATTAGGGATTATGGAAAACAGATGGCAGGTGATGGTTGTGTGGCAAGTAGACAGGATGAGGATTAA"
@@ -1593,7 +1593,7 @@
             "orientation": "forward",
             "start": 4567,
             "end": 5149,
-            "distance": 0.42812499999999987,
+            "distance": 0.5668393782383419,
             "protein": "MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH",
             "aminoacids": "MENRWQVMVVWQVDRMRINMWKSLVKYHIHNSGKARGWCYRHHYESRHPRISSEVHIPLGGEARLVVTTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPDLADQLIHLYYFNCFSESAIRQAILGHRVSPRCEYQAGHNKVGSLQYLALIALIPPKRRKPPLPSVRKRTEDRWNEPQRTKGHRESHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGGTTGTGTGGCAAGTAGACAGGATGAGGATTAACATGTGGAAAAGTTTAGTAAAATACCATATACATAATTCAGGGAAGGCTAGGGGATGGTGTTATAGACATCACTATGAAAGCAGACATCCAAGAATAAGTTCAGAAGTACACATCCCACTAGGAGGAGAGGCTAGACTAGTAGTGACAACATATTGGGGCCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAAGGAGTCTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGACCTAGCAGACCAACTAATTCATCTGTATTATTTTAATTGTTTTTCAGAATCTGCTATAAGACAAGCCATATTAGGACATAGAGTTAGTCCTAGGTGTGAATATCAAGCAGGACATAATAAGGTAGGATCTCTGCAGTACTTGGCACTAATAGCATTAATACCACCAAAAAGGAGAAAGCCACCTTTGCCTAGTGTGAGGAAACGGACAGAGGATAGATGGAACGAGCCCCAGAGGACCAAGGGCCACAGAGAGAGCCATACAATGAATGGACACTAG"
@@ -1602,18 +1602,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 5088,
-            "end": 5382,
-            "distance": 0.44230769230769296,
+            "end": 5379,
+            "distance": 0.46875,
             "protein": "MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS",
-            "aminoacids": "MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS*T",
-            "nucleotides": "ATGGAACGAGCCCCAGAGGACCAAGGGCCACAGAGAGAGCCATACAATGAATGGACACTAGAACTTTTAGAAGAGCTTAAAAGAGAAGCTGTTAGGCACTTTCCTAGGGCATGGCTTCACGGCCTGGGACAACATATCTATGAAACTTATGGAGATACTTGGGCAGGAGTGGAAGCTCTAATAAGAATTCTGCAACAACTGGTGTTTATTCATTTCAGAATTGGATGTCAGCACAGCAGGATAGGCATTCTTACCCATAGAAGAGCAAGAAATGGAGCCAGTAGATCCTAGACT"
+            "aminoacids": "MERAPEDQGPQREPYNEWTLELLEELKREAVRHFPRAWLHGLGQHIYETYGDTWAGVEALIRILQQLVFIHFRIGCQHSRIGILTHRRARNGASRS*",
+            "nucleotides": "ATGGAACGAGCCCCAGAGGACCAAGGGCCACAGAGAGAGCCATACAATGAATGGACACTAGAACTTTTAGAAGAGCTTAAAAGAGAAGCTGTTAGGCACTTTCCTAGGGCATGGCTTCACGGCCTGGGACAACATATCTATGAAACTTATGGAGATACTTGGGCAGGAGTGGAAGCTCTAATAAGAATTCTGCAACAACTGGTGTTTATTCATTTCAGAATTGGATGTCAGCACAGCAGGATAGGCATTCTTACCCATAGAAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5359,
             "end": 5578,
-            "distance": 0.5694444444444444,
+            "distance": 0.5416666666666667,
             "protein": "MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ",
             "aminoacids": "MEPVDPRLEPWKHPGSQPRTACTSCYCKKCCYHCPRCFLTKGLGISYGRKKRRQRRRTPQDNQNHQVSLSKQ*",
             "nucleotides": "ATGGAGCCAGTAGATCCTAGACTGGAGCCCTGGAAGCATCCAGGGAGTCAGCCTAGGACTGCGTGCACCAGTTGCTATTGTAAAAAGTGTTGCTATCATTGCCCGCGATGCTTCTTAACAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAACTCCTCAAGATAACCAGAACCATCAAGTTTCTTTATCAAAACAGTGA"
@@ -1623,7 +1623,7 @@
             "orientation": "forward",
             "start": 5498,
             "end": 5579,
-            "distance": 0.7153846153846151,
+            "distance": 0.75,
             "protein": "MAGRSGDSDEELLKITRTIKFLYQNSE",
             "aminoacids": "MAGRSGDSDEELLKITRTIKFLYQNSE",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAACTCCTCAAGATAACCAGAACCATCAAGTTTCTTTATCAAAACAGTGAG"
@@ -1633,7 +1633,7 @@
             "orientation": "forward",
             "start": 5590,
             "end": 5860,
-            "distance": 0.7073170731707319,
+            "distance": 0.5308641975308646,
             "protein": "MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL",
             "aminoacids": "MQSLEILAIVALVVAFIIAIVVWSIVLIEYRKIRRQKRIDRILDRIRERAEDSGNESEGDQEELAALVEMGNHAHLGMGHHAPWDVNDL*",
             "nucleotides": "ATGCAATCCTTAGAAATATTAGCAATAGTAGCATTAGTAGTAGCATTTATAATAGCAATAGTTGTTTGGTCTATAGTACTCATAGAATATAGGAAAATAAGAAGACAAAAGAGAATAGACAGGATACTTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAAGGGGACCAAGAAGAATTGGCAGCCCTCGTGGAGATGGGGAACCATGCTCATTTGGGGATGGGCCACCATGCTCCTTGGGATGTCAATGACCTGTAA"
@@ -1642,28 +1642,28 @@
             "name": "env",
             "orientation": "forward",
             "start": 5753,
-            "end": 8315,
-            "distance": 0.5410046728971969,
+            "end": 8342,
+            "distance": 0.5740566037735857,
             "protein": "MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL",
-            "aminoacids": "MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL*",
-            "nucleotides": "ATGAGAGTGAAGGGGACCAAGAAGAATTGGCAGCCCTCGTGGAGATGGGGAACCATGCTCATTTGGGGATGGGCCACCATGCTCCTTGGGATGTCAATGACCTGTAATGCAGAAGACTCGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTCTATTTTGTGCATCAGATGCCAAAGCATATGACACAGAGGTACACAATGTCTGGGCCACACATGCTTGTGTACCCACAGACCCCAACCCACAAGAAGTAGAATTAAATGTGACAGAAAATTTTAATGCATGGAAAAATAACATGGTAGATCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTAAACTGCACTGAGTTGAAGAATAGCACTGGAGAAATGAAAAACTGTTCTTTTAATGCCACCACAGCAATAAGAGATAAGGTGCAAAAACAATATGCACTTTTTTATAGACTTGATGTAGTACAAATTAAGGATGATAATACCAGCTATAATACCAGATATAGGTTGATAAATTGTAACTCCTCAACCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAAGGATAAGAATTTCAATGGAACAGGACTATGTGAAAATGTTAGCACAGTACAATGTACACATGGAATTAGACCAGTAGTATCAACTCAACTGTTGTTAAATGGCAGTCTAGCAGAAGGAGATGTAGTAATTAGATCTAAAAATTTCTCTAACAGTGCTCAAACCATAATAGTACAATTAAACGAAACTGTAGAAATTAATTGTACAAGACCCAACAATAATACAAGAAAAAGTATACATATAGGACCAGGGAGAGCATTTTATGCAACAGGAGACATAATAGGAGATATAAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGAGACTTTAAAAAAGATAGCTGATAAATTAAGGGAACAATTTAAAAGGGAGACAATAGTCTTTAACCAATCCTCAGGAGGGGACCCAGAGATTGTAATGCACAGTTTTAATTGTAGAGGGGAATTTTTCTACTGTAATACAACACAACTGTTTAATAGTACTTGGAATAGTACTACAGGAGTAAATGGTACAGGAGCAAATAATACAGAAGTAAATATTATCACACTCCCATGCAAGATAAAGCAAATTGTAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGTGGACAAATTAGTTGTTCATCAAATATTACAGGGCTACTACTACTAAGAGATGGTGGTAATAGCAATGACACGGATAACACGACTGAAATCTTCAGACCTGGAGGAGGAGATATGAGAGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTACAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAGGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTCTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCATCAATAACGCTGACGGTACAAGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATATGTTGCAGCTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTAGAAAGATACCTTAAGGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATCTGCACCACTAATGTGCCTTGGAATAGTAGTTGGAGTAATAAAAATCTGAGTTATATCTGGAATAACATGACCTGGATGCAGTGGGAAAAAGAAATTGACAATTACACAGAGGAAATATACAACTTAATTGAACAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTGGATAAATGGGCAAGTTTGTGGACTTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTTATAATGATAGTAGGAGGCTTAATAGGTTTAAGAATAGTTTTTACTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCTCCTCCCAGCCGCGAGGGGACCCGACAGGCCCGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCAGTCACTTAGCGCATGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTTCCTCTTCAGCTACCACCACTTGAGAGACTTACTCTTGATTGTAGCGAGGGGAGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGCCAGGAACTAAAGAATAGTGCTGTCAGCTTGCTCAACGCCACAGCCATAGCAGTAGCTGAGGGGACAGATAGGTTTATAGAAGTATTGCAAAGAATTTTTAGAGCTATTATCCACATACCTACAAGAATAAGACAGGGCTTGGAAAGGGCTTTGCTATAA"
+            "aminoacids": "MRVKGTKKNWQPSWRWGTMLIWGWATMLLGMSMTCNAEDSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVELNVTENFNAWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTELKNSTGEMKNCSFNATTAIRDKVQKQYALFYRLDVVQIKDDNTSYNTRYRLINCNSSTITQACPKVSFEPIPIHYCAPAGFAILKCKDKNFNGTGLCENVSTVQCTHGIRPVVSTQLLLNGSLAEGDVVIRSKNFSNSAQTIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNISRAKWNETLKKIADKLREQFKRETIVFNQSSGGDPEIVMHSFNCRGEFFYCNTTQLFNSTWNSTTGVNGTGANNTEVNIITLPCKIKQIVNMWQEVGKAMYAPPISGQISCSSNITGLLLLRDGGNSNDTDNTTEIFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVGIGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKNLSYIWNNMTWMQWEKEIDNYTEEIYNLIEQSQNQQEKNEQELLELDKWASLWTWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAARGPDRPEGIGEEGGERDRDRSSHLAHGFLTIIWVDLRSLFLFSYHHLRDLLLIVARGVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRFIEVLQRIFRAIIHIPTRIRQGLERALL*NGRHILKT*",
+            "nucleotides": "ATGAGAGTGAAGGGGACCAAGAAGAATTGGCAGCCCTCGTGGAGATGGGGAACCATGCTCATTTGGGGATGGGCCACCATGCTCCTTGGGATGTCAATGACCTGTAATGCAGAAGACTCGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTCTATTTTGTGCATCAGATGCCAAAGCATATGACACAGAGGTACACAATGTCTGGGCCACACATGCTTGTGTACCCACAGACCCCAACCCACAAGAAGTAGAATTAAATGTGACAGAAAATTTTAATGCATGGAAAAATAACATGGTAGATCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTAAACTGCACTGAGTTGAAGAATAGCACTGGAGAAATGAAAAACTGTTCTTTTAATGCCACCACAGCAATAAGAGATAAGGTGCAAAAACAATATGCACTTTTTTATAGACTTGATGTAGTACAAATTAAGGATGATAATACCAGCTATAATACCAGATATAGGTTGATAAATTGTAACTCCTCAACCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAAGGATAAGAATTTCAATGGAACAGGACTATGTGAAAATGTTAGCACAGTACAATGTACACATGGAATTAGACCAGTAGTATCAACTCAACTGTTGTTAAATGGCAGTCTAGCAGAAGGAGATGTAGTAATTAGATCTAAAAATTTCTCTAACAGTGCTCAAACCATAATAGTACAATTAAACGAAACTGTAGAAATTAATTGTACAAGACCCAACAATAATACAAGAAAAAGTATACATATAGGACCAGGGAGAGCATTTTATGCAACAGGAGACATAATAGGAGATATAAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGAGACTTTAAAAAAGATAGCTGATAAATTAAGGGAACAATTTAAAAGGGAGACAATAGTCTTTAACCAATCCTCAGGAGGGGACCCAGAGATTGTAATGCACAGTTTTAATTGTAGAGGGGAATTTTTCTACTGTAATACAACACAACTGTTTAATAGTACTTGGAATAGTACTACAGGAGTAAATGGTACAGGAGCAAATAATACAGAAGTAAATATTATCACACTCCCATGCAAGATAAAGCAAATTGTAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGTGGACAAATTAGTTGTTCATCAAATATTACAGGGCTACTACTACTAAGAGATGGTGGTAATAGCAATGACACGGATAACACGACTGAAATCTTCAGACCTGGAGGAGGAGATATGAGAGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTACAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAGGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTCTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCATCAATAACGCTGACGGTACAAGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATATGTTGCAGCTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTAGAAAGATACCTTAAGGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATCTGCACCACTAATGTGCCTTGGAATAGTAGTTGGAGTAATAAAAATCTGAGTTATATCTGGAATAACATGACCTGGATGCAGTGGGAAAAAGAAATTGACAATTACACAGAGGAAATATACAACTTAATTGAACAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTGGATAAATGGGCAAGTTTGTGGACTTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTTATAATGATAGTAGGAGGCTTAATAGGTTTAAGAATAGTTTTTACTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCTCCTCCCAGCCGCGAGGGGACCCGACAGGCCCGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCAGTCACTTAGCGCATGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTTCCTCTTCAGCTACCACCACTTGAGAGACTTACTCTTGATTGTAGCGAGGGGAGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGCCAGGAACTAAAGAATAGTGCTGTCAGCTTGCTCAACGCCACAGCCATAGCAGTAGCTGAGGGGACAGATAGGTTTATAGAAGTATTGCAAAGAATTTTTAGAGCTATTATCCACATACCTACAAGAATAAGACAGGGCTTGGAAAGGGCTTTGCTATAAAATGGGAGGCATATTCTCAAAACGTAA"
         },
         {
             "name": "tat_exon2",
             "orientation": "forward",
             "start": 7896,
-            "end": 7989,
-            "distance": 0.4866666666666659,
+            "end": 7992,
+            "distance": 0.6935483870967742,
             "protein": "RPSSQPRGDPTGPKESEKKVERETETDPVT",
-            "aminoacids": "RPSSQPRGDPTGPKESEKKVERETETDPVT*",
-            "nucleotides": "AGACCCTCCTCCCAGCCGCGAGGGGACCCGACAGGCCCGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCAGTCACTTAG"
+            "aminoacids": "RPSSQPRGDPTGPKESEKKVERETETDPVT*R",
+            "nucleotides": "AGACCCTCCTCCCAGCCGCGAGGGGACCCGACAGGCCCGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCAGTCACTTAGCGC"
         },
         {
             "name": "rev_exon2",
             "orientation": "forward",
             "start": 7897,
             "end": 8173,
-            "distance": 0.4945054945054945,
+            "distance": 0.5274725274725274,
             "protein": "DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE",
             "aminoacids": "DPPPSREGTRQARRNRRRRWRERQRQIQSLSAWILNNYLGRPAEPVPLQLPPLERLTLDCSEGSGTSGTQGVGSPQVLVESPAVLEPGTKE*",
             "nucleotides": "GACCCTCCTCCCAGCCGCGAGGGGACCCGACAGGCCCGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCAGTCACTTAGCGCATGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTTCCTCTTCAGCTACCACCACTTGAGAGACTTACTCTTGATTGTAGCGAGGGGAGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGCCAGGAACTAAAGAATAG"
@@ -1672,11 +1672,11 @@
             "name": "nef",
             "orientation": "forward",
             "start": 8316,
-            "end": 8940,
-            "distance": 0.6943089430894234,
+            "end": 8994,
+            "distance": 0.6674757281553398,
             "protein": "MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC",
-            "aminoacids": "MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC*",
-            "nucleotides": "ATGGGAGGCATATTCTCAAAACGTAATGGGGGTGGGTGGCCTGCAATAAGGGAAAGAATGAGACGAGCTCAGCCAGCAGCAGATGGGGTAGGAGCAGCATCTCGAGACCTGGAAAGACATGGAGCTCTCACAAGTAACAATACACCAGCTAACAATGCTGATTGTGCCTGGCTGGAAGCACAGGAAGAGGGGGAAGAAGTGGGTTTCCCAGTCAGACCTCAGGTACCTTTAAGACCAATGACATACAAGGGAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGTTAATTTACTCCCAACAAAGACAAGATATCCTTGATCTGTGGGTCTACAACACACAGGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATAAGATATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTGCCAATGGAACCAGAGGATGTAGAAAAGGCCACTGAAGGAGAGGACAACATCTTGTTACACCCTGTGAACCAGCATGGGATGGACGACTCAGAGAGAGAAGTGTTAGTGTGGAAGTTTGACAGCCGCCTAGCATTCCGTCACGTGGCCCGAGAGATACATCCGGAGTACTACAAGAACTGCTGA"
+            "aminoacids": "MGGIFSKRNGGGWPAIRERMRRAQPAADGVGAASRDLERHGALTSNNTPANNADCAWLEAQEEGEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPMEPEDVEKATEGEDNILLHPVNQHGMDDSEREVLVWKFDSRLAFRHVAREIHPEYYKNC*QRAFYKGLSARDFPGEA*",
+            "nucleotides": "ATGGGAGGCATATTCTCAAAACGTAATGGGGGTGGGTGGCCTGCAATAAGGGAAAGAATGAGACGAGCTCAGCCAGCAGCAGATGGGGTAGGAGCAGCATCTCGAGACCTGGAAAGACATGGAGCTCTCACAAGTAACAATACACCAGCTAACAATGCTGATTGTGCCTGGCTGGAAGCACAGGAAGAGGGGGAAGAAGTGGGTTTCCCAGTCAGACCTCAGGTACCTTTAAGACCAATGACATACAAGGGAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGTTAATTTACTCCCAACAAAGACAAGATATCCTTGATCTGTGGGTCTACAACACACAGGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATAAGATATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTGCCAATGGAACCAGAGGATGTAGAAAAGGCCACTGAAGGAGAGGACAACATCTTGTTACACCCTGTGAACCAGCATGGGATGGACGACTCAGAGAGAGAAGTGTTAGTGTGGAAGTTTGACAGCCGCCTAGCATTCCGTCACGTGGCCCGAGAGATACATCCGGAGTACTACAAGAACTGCTGACAGCGAGCTTTCTACAAGGGACTTTCCGCTAGGGACTTTCCAGGGGAGGCGTGA"
         }
     ],
     "MK114705.1": [
@@ -1685,7 +1685,7 @@
             "orientation": "forward",
             "start": 532,
             "end": 2053,
-            "distance": 0.339019607843138,
+            "distance": 0.21479999999999988,
             "protein": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ",
             "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELKSLFNTIAVLYCVHQRIDVKDTKEALNKIEEEQNKSKKKAQQAAADTGNSSQSSQVSQNYPIVQNHQGQMVYQALSPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIIMGLNKIVRMYSPISILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATGGATNIMMQKGNFRNQGKPIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKIWPSHKGRPGNFLQNRPEPTAPPEESFRFGEETTAPPQKQEPTDKELYPFSSLKSLFGNDPSSQ*R*",
             "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGCGAATTAGATAGATGGGAGAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAGTTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCGGTTAATCCTGGCCTGTTAGAAACATCAGAGGGCTGTAGGCAAATACTGGGACAGCTACAACCGTCCCTTCAAACAGGATCAGAAGAACTTAAATCATTATTTAATACAATAGCAGTCCTTTATTGCGTACATCAAAGGATAGATGTAAAAGACACCAAGGAAGCTCTAAATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAGCAAGCAGCAGCTGACACAGGAAACAGCAGTCAGAGCAGTCAAGTCAGCCAAAATTACCCTATAGTGCAGAACCATCAGGGGCAAATGGTATATCAGGCTCTATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCCGAGGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAGGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTACATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGGACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACACATAATCCACCTATCCCAGTAGGAGAAATTTATAAAAGATGGATAATCATGGGGTTAAATAAAATAGTAAGAATGTATAGCCCTATCAGCATTCTGGACATAAGACAAGGACCAAAAGAACCTTTTAGAGATTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAAGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACCATTCTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGGGGACCCAGCCACAAAGCAAGAGTCTTGGCTGAAGCAATGAGCCAAGCAACAGGTGGTGCAACTAACATAATGATGCAGAAAGGCAATTTTAGGAACCAAGGAAAACCTATTAAGTGTTTCAATTGTGGCAAAGAAGGGCACCTAGCTAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGACTGCTCTGAGAGACAGGCTAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGAAGGCCAGGGAATTTCCTCCAGAACAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAGCTCCCCCTCAGAAGCAGGAGCCGACAGACAAGGAACTGTATCCCTTCTCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAGTAAAGATAG"
@@ -1695,7 +1695,7 @@
             "orientation": "forward",
             "start": 1839,
             "end": 4851,
-            "distance": 0.23652517275419527,
+            "distance": 0.17248255234297116,
             "protein": "FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
             "aminoacids": "FFRENLAFPQGKAREFPPEQTRANSPTRRELQVWGRDNSSPSEAGADRQGTVSLLFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRAKVENLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVITLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATESIVVWGKIPKFRLPIQKETWETWWMEYWQATWIPEWEFVSTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVIPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQEDHEKYHSNWKAMASDFNIPPVVAKEIIASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGEYCAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGAAGGCCAGGGAATTTCCTCCAGAACAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAGCTCCCCCTCAGAAGCAGGAGCCGACAGACAAGGAACTGTATCCCTTCTCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAGTAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAGTTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAAATACCCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTAAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAACCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCCGTATTTGCCATAAAGAAAAAGGATAGTACTAAATGGAGAAAGTTAGTAGATTTCAGAGAGCTTAATAAAAGAACTCAAGACTTTTGGGAGGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCATATTTCTCAGTTCCTTTAGATGAAAGCTTCAGAAAGTATACTGCATTTACCATACCTAGTACTAACAATGAGACACCCGGGATTAGGTATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAAAGTAGCATGACGAAAATCTTAGAACCTTTTAGAAAACAAAATCCAGACATAGTTATCTACCAATACATGGATGATTTATACGTAGGATCTGACTTAGAAATAGAGCAGCATAGAGCAAAAGTAGAGAACCTGAGAGAGCATCTGTTGAGGTGGGGATTTACCACACCAGACAAAAAGCATCAGAAAGAACCTCCATTTCTTTGGATGGGCTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAGCTAAGGCACTAACAGAAGTGATAACACTAACAGAAGAAGCAGAGCTAGAATTGGCAGAAAACAGAGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAGTAGCAGAAATACAGAAGCAGGGGCAAGGTCAATGGACCTATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAACAAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAAGCAGTTCAAAAAATAGCCACAGAGAGCATAGTAGTATGGGGAAAGATTCCTAAATTTAGATTACCCATACAGAAAGAAACATGGGAAACATGGTGGATGGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAGTACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAGACTAAAAAAGGAAAAGCAGGATATGTTACTGACAGAGGAAGGCAAAAAGTTATCCCCTTAACTGACACAACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGACAAGAGTGAATCAGAGTTAGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGAGAAGGTCTACCTGACATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCAGGAATCAGGAAAATACTATTTTTGGATGGAATAGATAAGGCCCAGGAAGATCATGAGAAATATCATAGTAATTGGAAAGCAATGGCTAGTGATTTTAACATACCACCTGTGGTAGCAAAAGAGATAATAGCCAGCTGTGATAAATGTCAGCTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTCCATGTAGCCAGTGGGTACATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGATGGCCAGTAAAAATAATACATACAGATAATGGTAGCAATTTCACCAGCACTACAGTCAAGGCCGCCTGCTGGTGGGCAGGTGTTAAGCAGGAGTTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTGGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGAGTACTGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAGGGACCAGCAAAGCTGCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGAAATCAAAGTAGTACCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
@@ -1705,7 +1705,7 @@
             "orientation": "forward",
             "start": 4795,
             "end": 5383,
-            "distance": 0.31770833333333326,
+            "distance": 0.34375,
             "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWVYRHHYESTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYNTQVDPGLADQLIHMYYFDCFSESAIRQAILGHRVSPSCEYQAGHNKVGSLQYLALAVLVAPKKIKPPLPSVARLTEDRWNKPRKIKGHRESHTMNGH*NF*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAAAAGTCTAGTAAAACACCATATGTATATTTCAAAGAAAGCTAAGGGATGGGTTTACAGACACCACTATGAAAGCACTCATCCAAGAATAAGTTCAGAAGTACACATCCCACTAGGGGATGCTAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGCCAGGGAGTCTCCATAGAATGGAGGAAAAAGAGATATAACACACAAGTAGACCCTGGCCTAGCAGACCAACTAATTCATATGTACTATTTTGATTGTTTTTCAGAATCTGCTATAAGACAAGCCATATTAGGACATAGAGTTAGTCCTAGTTGTGAATATCAAGCAGGACATAACAAGGTAGGATCTCTGCAATACCTGGCACTAGCAGTATTAGTAGCACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTCGCGAGACTGACAGAGGATAGATGGAACAAGCCCCGGAAGATCAAGGGCCACAGAGAGAGCCATACAATGAATGGGCACTAGAACTTTTAG"
@@ -1714,18 +1714,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 5313,
-            "end": 5598,
-            "distance": 0.43437499999999996,
+            "end": 5601,
+            "distance": 0.46153846153846234,
             "protein": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS",
-            "aminoacids": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS*",
-            "nucleotides": "ATGGAACAAGCCCCGGAAGATCAAGGGCCACAGAGAGAGCCATACAATGAATGGGCACTAGAACTTTTAGAGGAGCTTAAGAGGGAAGCTGTTAGACATTTTCCTAGGGAATGGCTCCATAGCTTAGGACAACATATCTATGAAACTTATGGGGACACTTGGGCAGGAGTAGGAGCCATAATAAGAATACTGCAACAATTACTGTTTATTCATTTCAGAATTGGGTGTCACCATAGCAGGATAGGCATACTGAGGAGAACAAGAAATGGAGCCCGTAGATCCTAG"
+            "aminoacids": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPREWLHSLGQHIYETYGDTWAGVGAIIRILQQLLFIHFRIGCHHSRIGILRRTRNGARRS*T",
+            "nucleotides": "ATGGAACAAGCCCCGGAAGATCAAGGGCCACAGAGAGAGCCATACAATGAATGGGCACTAGAACTTTTAGAGGAGCTTAAGAGGGAAGCTGTTAGACATTTTCCTAGGGAATGGCTCCATAGCTTAGGACAACATATCTATGAAACTTATGGGGACACTTGGGCAGGAGTAGGAGCCATAATAAGAATACTGCAACAATTACTGTTTATTCATTTCAGAATTGGGTGTCACCATAGCAGGATAGGCATACTGAGGAGAACAAGAAATGGAGCCCGTAGATCCTAGACT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5578,
             "end": 5797,
-            "distance": 0.41666666666666674,
+            "distance": 0.6222222222222225,
             "protein": "MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ",
             "aminoacids": "MEPVDPRLEPWKHPGSQPRTPCNNCYCKKCCFHCQVCFTKKGLGISYGRKKRRQRRGPPRDSQIHQVPLPKQ*",
             "nucleotides": "ATGGAGCCCGTAGATCCTAGACTGGAACCCTGGAAGCATCCAGGAAGTCAGCCTAGGACTCCTTGTAACAATTGCTATTGTAAAAAGTGCTGCTTTCATTGCCAAGTTTGCTTCACAAAAAAGGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGCGACAGAGACGAGGACCTCCTCGAGACAGTCAGATTCATCAAGTTCCTCTACCAAAACAGTAA"
@@ -1735,7 +1735,7 @@
             "orientation": "forward",
             "start": 5717,
             "end": 5798,
-            "distance": 0.75,
+            "distance": 0.8653846153846154,
             "protein": "MAGRSGDRDEDLLETVRFIKFLYQNSK",
             "aminoacids": "MAGRSGDRDEDLLETVRFIKFLYQNSK",
             "nucleotides": "ATGGCAGGAAGAAGCGGCGACAGAGACGAGGACCTCCTCGAGACAGTCAGATTCATCAAGTTCCTCTACCAAAACAGTAAG"
@@ -1745,7 +1745,7 @@
             "orientation": "forward",
             "start": 5809,
             "end": 6055,
-            "distance": 0.5185185185185186,
+            "distance": 0.7963414634146342,
             "protein": "MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL",
             "aminoacids": "MQPLEISAIVALVVVAIIAIVVWTIVLLEYRKILRQKKIDRLINRISERAEDSGNESDGDQEELSALMEMGRLAPWNVDDL*",
             "nucleotides": "ATGCAACCTTTAGAGATATCAGCAATAGTAGCATTAGTAGTAGTAGCAATAATAGCAATAGTTGTGTGGACCATAGTACTCTTAGAGTATAGGAAAATATTAAGGCAAAAGAAAATAGACAGATTAATTAATAGAATAAGTGAAAGAGCAGAAGACAGTGGCAATGAGAGTGACGGGGATCAAGAAGAATTGTCAGCTCTTATGGAGATGGGGCGCCTTGCTCCTTGGAATGTTGATGATCTGTAG"
@@ -1755,7 +1755,7 @@
             "orientation": "forward",
             "start": 5972,
             "end": 8549,
-            "distance": 0.567251461988304,
+            "distance": 0.5660046728971964,
             "protein": "MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL",
             "aminoacids": "MRVTGIKKNCQLLWRWGALLLGMLMICSATNMWVTVYYGVPVWKDATTTLFCASDAKAYDTEIHNVWATHACVPTDPDPQEVVLENVTENYNMGKNNMVEQMHEDIISLWDQSLKPCVLLTPFCVTLNCTDANITSTNNSRDKKEGESTLEETKGEIKNCSFNMTSSMSDKSQKQRALFYKLDVVQIDETNNNSYRLISCNTSVVTQACPKVSFDPIPIHYCAPAGFAILKCNNKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENFTNNAKTIIVQLKTPVQINCTRPNNNTRKRISMGPGRVIYATGQIIGDIRKAHCNISRAEWNTTLKQIVTQLRKQWNRTIIFNSSSGGDPEIVMHSFNCRGEFFYCNTTKLFNSTWPRNSTWNNTEGSNDTEIITLPCRIKQIVNRWQEVGKAMYAPPIQGQISCSSNITGLLLVRDGGINTSESNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGLLGAAGSTMGAASVTLTVQTRLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSYEDIWNNMTWMEWEKEIDNYTGLIYTLIEKSQNQQEINEQELLSLDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTPRPAPRGPDRPEEIEEGGGERDRDRSVRLVTGFFALFWDDLRSLCLFSYHHLRDLILIVVRVVEILGRRGWEALKYWWNLLQYWSQEIKNSAISLLNATAIAVAEGTDRIIGVVQRTWRAFIHIPRRIRQGFERALL*",
             "nucleotides": "ATGAGAGTGACGGGGATCAAGAAGAATTGTCAGCTCTTATGGAGATGGGGCGCCTTGCTCCTTGGAATGTTGATGATCTGTAGTGCTACAAACATGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGATGCAACCACCACTCTATTCTGTGCATCAGATGCTAAAGCATATGATACAGAGATACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCGACCCACAAGAAGTAGTACTGGAAAATGTGACAGAAAATTATAATATGGGAAAAAATAACATGGTGGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTACTCTTAACCCCATTCTGTGTCACTTTAAATTGCACTGATGCTAACATCACCAGCACTAATAATAGTAGAGATAAGAAGGAAGGAGAAAGTACATTGGAGGAGACGAAAGGAGAAATAAAAAACTGCTCTTTCAATATGACTTCAAGCATGAGCGATAAGTCTCAGAAACAACGTGCACTTTTTTATAAGCTTGATGTGGTACAAATAGATGAGACTAATAATAATAGTTATAGGTTGATAAGTTGTAACACCTCAGTCGTCACACAGGCTTGTCCAAAGGTATCCTTTGATCCAATCCCTATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAATAATAAGAAATTCAATGGAACAGGACCATGTAAAAATGTCAGCACAGTACAATGTACACATGGAATTAAACCTGTAGTGTCAACCCAACTGCTGTTAAATGGTAGTCTAGCAGAAGAAGAAGTAATGATTAGATCTGAAAATTTCACGAACAATGCTAAAACCATAATAGTGCAGCTGAAGACACCTGTACAAATTAATTGTACAAGACCCAACAACAATACAAGAAAAAGGATAAGTATGGGACCAGGGAGAGTAATTTATGCAACAGGACAAATAATAGGAGATATAAGAAAAGCACATTGCAACATTAGTAGAGCAGAATGGAATACAACTTTAAAGCAGATAGTTACACAATTAAGAAAGCAGTGGAATAGAACCATAATCTTTAACTCATCCTCAGGAGGGGACCCAGAAATTGTGATGCACAGTTTTAATTGTAGAGGGGAATTTTTCTACTGTAATACAACAAAACTATTTAATAGTACTTGGCCACGTAATAGTACTTGGAATAATACTGAAGGGTCAAATGACACTGAAATAATCACACTCCCGTGCAGAATAAAACAAATTGTAAACAGGTGGCAGGAAGTAGGCAAAGCAATGTATGCCCCTCCCATCCAAGGACAAATTAGTTGTTCATCAAATATTACAGGGCTGCTACTAGTTAGAGATGGTGGAATTAACACCAGTGAGAGCAACGAGACCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAGGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATGCTGGGAGCTATGTTCCTTGGGCTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAGTGACGTTGACGGTACAGACCAGACTATTATTGTCTGGTATAGTGCAACAGCAGAACAATCTGCTGAGGGCTATTGAGGCGCAGCAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGACTCCTAGCTGTGGAAAGATACCTACAGGATCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAACTCATCTGCACCACTACTGTGCCTTGGAACACTAGTTGGAGTAATAGATCTTATGAAGATATTTGGAACAACATGACCTGGATGGAGTGGGAAAAAGAAATTGACAATTACACAGGCTTAATATACACCTTAATTGAAAAATCGCAGAACCAGCAGGAAATAAATGAACAAGAACTATTGTCATTGGATAAGTGGGCAAGCCTGTGGAATTGGTTTAATATAACAAATTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGATAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATACTCACCATTGTCATTGCAGACCCCCCGCCCAGCCCCAAGGGGACCCGACAGGCCCGAAGAAATCGAAGAAGGAGGTGGAGAAAGAGACAGAGACAGATCAGTGCGATTAGTGACTGGATTCTTCGCACTTTTCTGGGACGATCTACGAAGCCTGTGCCTCTTCAGCTACCACCACTTGAGAGACTTAATCTTGATTGTAGTGAGGGTTGTGGAAATTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTGCAGTACTGGAGTCAGGAAATAAAGAATAGTGCTATCAGCTTGCTCAACGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGAATCATAGGAGTAGTACAAAGAACTTGGAGAGCTTTTATCCACATACCTAGGAGAATAAGACAGGGCTTTGAAAGGGCTTTGCTATAA"
@@ -1765,7 +1765,7 @@
             "orientation": "forward",
             "start": 8130,
             "end": 8226,
-            "distance": 1.0,
+            "distance": 0.9733333333333327,
             "protein": "RPPAQPQGDPTGPKKSKKEVEKETETDQCD",
             "aminoacids": "RPPAQPQGDPTGPKKSKKEVEKETETDQCD**",
             "nucleotides": "AGACCCCCCGCCCAGCCCCAAGGGGACCCGACAGGCCCGAAGAAATCGAAGAAGGAGGTGGAGAAAGAGACAGAGACAGATCAGTGCGATTAGTGA"
@@ -1775,7 +1775,7 @@
             "orientation": "forward",
             "start": 8131,
             "end": 8407,
-            "distance": 0.6263736263736264,
+            "distance": 0.5494505494505495,
             "protein": "DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE",
             "aminoacids": "DPPPSPKGTRQARRNRRRRWRKRQRQISAISDWILRTFLGRSTKPVPLQLPPLERLNLDCSEGCGNSGTQGVGSPQILVESPAVLESGNKE*",
             "nucleotides": "GACCCCCCGCCCAGCCCCAAGGGGACCCGACAGGCCCGAAGAAATCGAAGAAGGAGGTGGAGAAAGAGACAGAGACAGATCAGTGCGATTAGTGACTGGATTCTTCGCACTTTTCTGGGACGATCTACGAAGCCTGTGCCTCTTCAGCTACCACCACTTGAGAGACTTAATCTTGATTGTAGTGAGGGTTGTGGAAATTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTGCAGTACTGGAGTCAGGAAATAAAGAATAG"
@@ -1785,7 +1785,7 @@
             "orientation": "forward",
             "start": 8550,
             "end": 9138,
-            "distance": 1.0289215686274478,
+            "distance": 0.4593495934959331,
             "protein": "MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK",
             "aminoacids": "MGGKWSKKSGGGWPAVREKMKRTEPAAEGVGAASRDLDKYGAITSSNTAQTNPDCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDMSHFLKEKGGLEGLIHSQKRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPLTFGGCFK*CVPVCCVTLVTRDPSDHFSQRGKSLAVAPEQGPESESRTRGDLSTQDSAC*",
             "nucleotides": "ATGGGTGGAAAATGGTCAAAAAAGAGTGGGGGTGGATGGCCTGCTGTAAGGGAAAAAATGAAGCGAACTGAGCCAGCAGCAGAGGGGGTGGGAGCAGCATCTCGAGACCTGGACAAATATGGAGCAATCACAAGTAGCAATACAGCACAGACCAATCCTGATTGTGCCTGGCTAGAAGCACAAGAAGAGGAAGAGGTAGGCTTTCCAGTCAGACCCCAGGTACCTTTGAGACCAATGACTTACAAGGCAGCTGTGGATATGAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAAGAGACAAGATATCCTTGATCTGTGGATCTATCACACACAAGGCTACTTCCCTGATTGGCAAAATTACACACCAGGGCCAGGGGTCAGATATCCACTGACCTTTGGAGGGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGATCCCTCAGACCATTTTAGTCAGCGTGGAAAATCTCTAGCAGTGGCGCCCGAACAGGGACCTGAAAGCGAAAGTAGAACCAGAGGAGATCTCTCGACGCAGGACTCGGCTTGCTGA"
@@ -1908,18 +1908,18 @@
             "name": "gag",
             "orientation": "forward",
             "start": 302,
-            "end": 1907,
-            "distance": 1.8788235294117652,
+            "end": 1715,
+            "distance": 1.8444000000000005,
             "protein": "MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC",
-            "aminoacids": "MGARASVLSGGKLDR*EKIYLRPEGKKKYRLKHIV*ASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPLSPRTLNA*VKVIEEKAFSPEVIPMFSALSERATPQDLNTMLNTVRGHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRGSDIAGTTSTLQEQIR*MTHNPPIPVGEIYKRWIILRLNKIVRMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC*KCRKERHQMKDCTKRPD*DG*FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*GRGNSSSSEAGDERPRTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEINLPGK*",
-            "nucleotides": "ATGGGTGCTAGAGCGTCAGTATTAAGCGGCGGAAAATTAGATAGATAGGAAAAAATTTACCTAAGGCCAGAAGGAAAGAAAAAATATAGATTAAAACATATAGTATAGGCAAGCAGGGAGCTAGAACGATTCGCAGTCAACCCTGGCCTGTTAGAGTCATCAGAAGGCTGCAGGCAAATTCTAGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAGTCCTCTATTGCGTACATCAAAGGATAAATGTAAAAGACACCAAGGAAGCTCTAGACAAAATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAACAAGCAGCAGCTGACACAGGAAACAGCAGCAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTACAGGGGCAAATAGTACATCAACCATTATCACCTAGAACTTTAAATGCATAGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCACTATCAGAAAGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGAGAGGACATCAAGCAGCCATGCAGATGTTAAAAGAAACCATCAATGATGAGGCTGCAGAATAGGATAGATTGCATCCAGTGCATGCAGGCCCTATTGCACCAGGCCAGATGAAAGAACCAAGAGGAAGTGACATAGCAGGAACCACTAGTACCCTTCAGGAACAAATAAGATAGATGACACATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTAAGGCTAAACAAAATAGTAAGAATGTATAGCCCTGTCAGCATTTTGGACATAAGACAAAGACCAAAAGAACCCTTTAAAGATTATGTAGACCGATTCTATAAAACTCTAAAGGCTGAGCAAGCGTCACAGGATGTAAAAAATTAGATGACAGAAACCTTGTTAGTCCAAAATGCGAATCCAGATTGTAAGACCATTTTAAAAGCATTAGGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTAAGAGGACCCGGCCACAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAAGTCAGCCTCCATAATAGTGCAAGGAGGCAATTTTAAGAACCAAAGAAAGAATGTTAAGTGTTTCAATTGTGGCAAAGAAAGACACACAGCCAAAAATTGCAGGGCCCCTAAGAAAAAAGGCTGTTAAAAATGTAGAAAGGAAAGACACCAAATGAAAGATTGTACTAAGAGACCAGACTAAGACGGCTAATTTTTTAAGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAGAGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGAGGAAGAGGCAACAGCTCCTCCTCAGAAGCAGGAGACGAAAGACCAAGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAGGAGGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATAAATTTGCCAGGAAAATAG"
+            "aminoacids": "MGARASVLSGGKLDR*EKIYLRPEGKKKYRLKHIV*ASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHQRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPLSPRTLNA*VKVIEEKAFSPEVIPMFSALSERATPQDLNTMLNTVRGHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRGSDIAGTTSTLQEQIR*MTHNPPIPVGEIYKRWIILRLNKIVRMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVRGPGHKARVLAEAMSQVTKSASIIVQGGNFKNQRKNVKCFNCGKERHTAKNCRAPKKKGC*KCRKERHQMKDCTKRPD*DG*FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*",
+            "nucleotides": "ATGGGTGCTAGAGCGTCAGTATTAAGCGGCGGAAAATTAGATAGATAGGAAAAAATTTACCTAAGGCCAGAAGGAAAGAAAAAATATAGATTAAAACATATAGTATAGGCAAGCAGGGAGCTAGAACGATTCGCAGTCAACCCTGGCCTGTTAGAGTCATCAGAAGGCTGCAGGCAAATTCTAGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAGTCCTCTATTGCGTACATCAAAGGATAAATGTAAAAGACACCAAGGAAGCTCTAGACAAAATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAACAAGCAGCAGCTGACACAGGAAACAGCAGCAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTACAGGGGCAAATAGTACATCAACCATTATCACCTAGAACTTTAAATGCATAGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCACTATCAGAAAGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGAGAGGACATCAAGCAGCCATGCAGATGTTAAAAGAAACCATCAATGATGAGGCTGCAGAATAGGATAGATTGCATCCAGTGCATGCAGGCCCTATTGCACCAGGCCAGATGAAAGAACCAAGAGGAAGTGACATAGCAGGAACCACTAGTACCCTTCAGGAACAAATAAGATAGATGACACATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTAAGGCTAAACAAAATAGTAAGAATGTATAGCCCTGTCAGCATTTTGGACATAAGACAAAGACCAAAAGAACCCTTTAAAGATTATGTAGACCGATTCTATAAAACTCTAAAGGCTGAGCAAGCGTCACAGGATGTAAAAAATTAGATGACAGAAACCTTGTTAGTCCAAAATGCGAATCCAGATTGTAAGACCATTTTAAAAGCATTAGGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTAAGAGGACCCGGCCACAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAAGTCAGCCTCCATAATAGTGCAAGGAGGCAATTTTAAGAACCAAAGAAAGAATGTTAAGTGTTTCAATTGTGGCAAAGAAAGACACACAGCCAAAAATTGCAGGGCCCCTAAGAAAAAAGGCTGTTAAAAATGTAGAAAGGAAAGACACCAAATGAAAGATTGTACTAAGAGACCAGACTAAGACGGCTAATTTTTTAAGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAGAGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGA"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 1613,
             "end": 4703,
-            "distance": 1.9012833168805523,
+            "distance": 1.89531405782652,
             "protein": "AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED",
             "aminoacids": "FFKEDLAFPQGKAREFSPEQTRANSPASRELQV*GRGNSSSSEAGDERPRTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEINLPGK*KPKMIKRIRSFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKSGIDSPRVKQWPLTEEKIKALIEICAEIEKEKKITKIRPENPYNTPVFAIKKKDSTK*KKLVDFRELNKRTQDF*EVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPEVKYQYNVLPQR*KRSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLR*GLTTPDKKHQKKPPFL*ISYELHPDK*TVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQRRDQ*TYQIYQEPFKNLKTEKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*KMWWTKYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVNKAANRKTKLRKAEYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIEGNEQVDKLVSNRIRRVLFLDRIDKAQEEHEKYHSN*RAMASNFNLPPVVAKEIVASCDKCQLKGEPMHRQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGR*PVKIIHTDNGSNFTSTTVKAAC**AEIKQEFSIPYNPQSQRVVKSMNNKLKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYRKQMAGDDCVASRQDED*NIEQFSKTPYAYFKESSEIGLQTSL*",
             "nucleotides": "TTTTTTAAGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAGAGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGAGGAAGAGGCAACAGCTCCTCCTCAGAAGCAGGAGACGAAAGACCAAGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAGGAGGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATAAATTTGCCAGGAAAATAGAAACCAAAAATGATAAAAAGAATTAGAAGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAGAAATTTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACGCCAGTCAACATAATTAGAAGAAATCTGTTGACCCAGCTTAGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGTAAAATTAAAGTCAGGAATAGATAGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAGGCATTAATAGAAATTTGTGCAGAAATAGAAAAGGAAAAGAAAATTACAAAAATTAGGCCTGAGAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGAAAAAAATTAGTAGATTTCCGAGAACTTAATAAGAGAACACAAGACTTCTAAGAAGTTCAACTAAGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAGTTCCTTTAGACAAAGACTTCAGAAAGTATACTGCATTTACCATACCCAGTATAAACAATGAGGCACCAGAAGTTAAATATCAGTACAATGTGCTTCCACAGAGATAGAAAAGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAGGAAAATCCAGACATAGTTATCTATCAATACATAGATGATTTGTATGTAAGATCTGACTTAGAAATAGAGCAGCACAGAACAAAAATAGAAGAACTGAGACAACATCTGTTAAGGTGAGGACTCACCACACCAGACAAGAAACATCAGAAAAAACCTCCATTTCTTTAGATAAGTTATGAACTCCATCCTGATAAATAGACAGTACAGCCTATACAGCTGCCAGACAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTAAGAAAGTTGAATTAGGCAAGCCAGATCTATCCAGAGATTAAAGTAAAGCAATTATGTAAACTCCTTAGAGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGAGAGATTCTAAAAGAACCAGTACATGGAGCATATTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAGCAGAGGAGAGACCAATAGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGAGAAATATGCAAGAACGAGAGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCCTAGAAGCCATAGTAATATGAAGAAAGACTCCTAAATTTAAACTACCTATACAAAAAGAAACATAGAAAATGTGGTGGACAAAGTATTGGCAAGCCACCTAGATTCCTGAGTAAGAATTTGTCAATACCCCTCCCTTAGTAAAACTATAGTACCAGTTAGAGAAAGAACCCATAGTAAGAGCAGAAACTTTCTATGTAAATAAGGCAGCTAATAGAAAGACTAAATTAAGAAAAGCAGAGTATGTTACGGACAGAAGAAGACAAAAGGTTGTCTCCCTAATAGACACAACAAATCAGAGGACTAAGTTACACGCAATTCATCTAGCTTTGCAGGATTCAGGATCAACAGTAAACATAGTGACAGACTCACAATATGCCTTAAAGATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGCTAATAAAAAAAGAAAAGATTTACCTGGCATAAGTCCCAGCACACAAAAGAATTGAAGGAAATGAACAAGTAGATAAATTAGTCAGTAATAGAATCAGAAGAGTACTATTTCTAGATAGAATAGATAAAGCCCAAGAAGAACATGAAAAATATCACAGTAATTAGAGAGCAATGGCTAGTAATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAGGAGAACCTATGCATAGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAAGAAAAATTATCCTAGTAGCAGTTCATGTAGCCAGTAGATACATAGAAGCAGAAGTTATTGCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGATAGCCAGTAAAAATAATACATACAGACAATGGCAGCAATTTCACCAGCACTACAGTTAAAGCCGCCTGTTAGTAGGCAGAGATCAAGCAGGAATTTAGTATTCCCTACAATCCTCAAAGTCAAAGAGTAGTAAAATCTATGAATAATAAATTAAAGAAAATTATAGGACAGGTAAAAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCATAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTTCAAAAATTCAAAATTTTCAGGTTTATTACAGGGACAGCAGAGAACCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGATATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCCTTAGAGATTATAGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATAGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATAGGTTTACAGACATCACTATGA"
@@ -1938,18 +1938,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 5087,
-            "end": 5378,
-            "distance": 1.2177083333333347,
+            "end": 5381,
+            "distance": 1.0679487179487188,
             "protein": "MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT",
-            "aminoacids": "MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT*AEVEAIIRTLQQLLFIHFRIRCQHSRIGIIRQRRARNRASRS*",
-            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAAGGCCACAAAAGGAGCCATACAATAAATGGACATTAGAGCTCTTAGAAGAGCTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTAGGCAGAGGTAGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTAGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATAGAGCCAGTAGATCCTAG"
+            "aminoacids": "MEQVPEDQRPQKEPYNKWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDT*AEVEAIIRTLQQLLFIHFRIRCQHSRIGIIRQRRARNRASRS*L",
+            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAAGGCCACAAAAGGAGCCATACAATAAATGGACATTAGAGCTCTTAGAAGAGCTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTAGGCAGAGGTAGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTAGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATAGAGCCAGTAGATCCTAGCTT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5412,
             "end": 5574,
-            "distance": 1.151388888888889,
+            "distance": 1.0958333333333334,
             "protein": "MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ",
             "aminoacids": "MTACNNCYCKRCCFHCQVCFTTKSLGISYGRKKQRQRRRASHSSQNHQAALPEQ",
             "nucleotides": "ATGACTGCTTGTAACAATTGCTATTGTAAACGGTGTTGCTTTCATTGCCAAGTTTGCTTCACAACAAAAAGCTTAGGCATCTCCTATGGCAGGAAGAAGCAGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAG"
@@ -1959,7 +1959,7 @@
             "orientation": "forward",
             "start": 5497,
             "end": 5575,
-            "distance": 0.6538461538461537,
+            "distance": 0.7692307692307692,
             "protein": "MAGRSRDSDEELLTAVRIIKRLYQSS",
             "aminoacids": "MAGRSRDSDEELLTAVRIIKRLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCAGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGT"
@@ -1968,18 +1968,18 @@
             "name": "vpu",
             "orientation": "forward",
             "start": 5589,
-            "end": 5868,
-            "distance": 0.7098765432098768,
+            "end": 5835,
+            "distance": 0.9975609756097563,
             "protein": "MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP",
-            "aminoacids": "MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP*DSNDM*CQQLVGHSLL*",
-            "nucleotides": "ATGCATGCCTTAGAAATAGCAGCAATAGCAGGATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTGGTCTATAGTATTAATAGAATATAAGAAAATTTTAAGACAAAGGAAAATAGACAGGTTAATTAATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGACGAGGACCAAGAGGAATTATCCGCACTTGTGGAGATGAGGCATCTTGTTCCTTAAGATAGTAATGATATGTAGTGCCAACAACTTGTAGGTCACAGTCTATTATAA"
+            "aminoacids": "MHALEIAAIAGLVVAAIIAIVVWSIVLIEYKKILRQRKIDRLINRIRERAEDSGNESDEDQEELSALVEMRHLVP*DSNDM*",
+            "nucleotides": "ATGCATGCCTTAGAAATAGCAGCAATAGCAGGATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTGGTCTATAGTATTAATAGAATATAAGAAAATTTTAAGACAAAGGAAAATAGACAGGTTAATTAATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGACGAGGACCAAGAGGAATTATCCGCACTTGTGGAGATGAGGCATCTTGTTCCTTAAGATAGTAATGATATGTAG"
         },
         {
             "name": "env",
             "orientation": "forward",
             "start": 5752,
             "end": 8353,
-            "distance": 1.875672514619878,
+            "distance": 1.878154205607472,
             "protein": "MKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD",
             "aminoacids": "MRVTRTKRNYPHLWR*GILFLKIVMICSANNL*VTVYYKVPV*KEATTTLFCASDAKAYETEKHNV*ATHACVPTDPSPQEVALENVTETFNM*KNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDNLNLTCPNNNTCSNNTNYNMKEKGEIKNCSFNVTTGIRDKVTKEHALFYKLNVVPIDEDSKNTTGKYKMINCNTSVITQACPKVSFKPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEKIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYRTDIIRDIRQAHYNISKKD*NDTLKQIVIKLKEKFKNKTIVFTQSSGEDPEIVMHSFNCREEFFYCNTTQLFNST*NNST*NSTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQRQIRCSSNITGLLLVRDGRSNNSSNDTETFRPRGRDMKDN*RSKLYKYKVVKIKPLRIAPTHAKRRVVQKEKRAIRLEAFFLRFLRAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQAKVLALERYLKDQQLLRI*SCSGKLICTTNVPWNISWSPRWNRSLDKI*TNMT*KQ*EKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQ*L*YIKIFIIIVRGLISLRIVFTILSIVNKVRQGYSPLSLQTLLPTQRGPDRPERTEERGRKKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLKDLLLIAARIVELLGRRK*EALKY**NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*",
             "nucleotides": "ATGAGAGTGACGAGGACCAAGAGGAATTATCCGCACTTGTGGAGATGAGGCATCTTGTTCCTTAAGATAGTAATGATATGTAGTGCCAACAACTTGTAGGTCACAGTCTATTATAAAGTACCTGTATAGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGAGACAGAGAAGCATAATGTTTAGGCAACCCATGCCTGTGTACCCACAGACCCCAGCCCACAGGAAGTAGCATTAGAAAATGTGACAGAAACATTTAACATGTAGAAAAATGACATGGTAGAGCAGATGCATGAGGATATAATCAGTTTATAGGATCAAAGCCTAAAGCCATGTGTGAAACTAACCCCACTCTGTGTTACTTTAAATTGCACTGATAATTTAAATCTAACTTGCCCTAACAATAATACTTGTAGTAATAATACTAATTATAATATGAAAGAAAAAGGAGAAATAAAAAACTGCTCTTTCAATGTCACCACAGGAATAAGAGATAAGGTGACAAAAGAACATGCACTTTTCTATAAACTTAATGTAGTACCAATAGATGAAGATAGTAAAAATACTACGGGCAAATATAAGATGATAAATTGTAACACCTCAGTCATTACACAAGCCTGTCCAAAGGTATCCTTTAAGCCAATTCCCATACATTTTTGTGCCCCGGCTAGTTTTGCGATTCTAAAGTGTAAAGATAAGAAATTCAATAGAACAGGAGAATGTAGAAATGTCAGCACAGTACAATGTACACATAGAATTAGGCCAGTAGTATCAACTCAACTGCTGCTAAACGGCAGTCTAGCAGAAGAAAAGATAGTAATTAGATCTGCCAATCTCTCGAACAATGCTAAAACCATAATAGTACAGCTGAATAAATCTGTAAAAATTAATTGTACAAGACCCAACAATAATACAAGAAGAAGTATACACATAGGACCAGGGAGGGCATTTTATAGAACAGACATAATAAGAGATATAAGACAAGCGCATTATAACATTAGTAAGAAAGATTAGAATGACACTTTAAAACAGATAGTTATAAAATTAAAAGAAAAATTTAAGAATAAAACAATAGTCTTTACTCAATCCTCAGGAGAAGACCCAGAGATAGTGATGCATAGTTTTAATTGTAGAGAGGAATTTTTCTACTGTAATACAACACAGCTGTTTAATAGTACTTAGAATAATAGTACTTAGAATAGTACTGATAATTAGAATAGTACTGAATCAAATAGCACTATCACACTCCCATGCAGAATAAAACAAATTATAAACTTGTGGCAGGAAGTAAGAAGAGCAATGTATGCCCCTCCCATCCAAAGGCAAATTAGATGTTCATCAAATATTACAGGGCTGCTGCTAGTAAGAGATGGTAGGAGCAACAATAGTAGTAATGATACAGAGACCTTCAGGCCTAGAGGAAGAGATATGAAGGACAATTAGAGAAGTAAATTATATAAATATAAAGTAGTCAAAATTAAACCATTAAGAATAGCACCCACCCATGCAAAGAGAAGAGTGGTGCAAAAGGAAAAAAGAGCAATAAGACTTGAAGCTTTCTTCCTTAGGTTCTTAAGAGCAGCAGGAAGCACTATAGGCGCAGCGTCAGTGACGCTGACAGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAAAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTAAGGCATCAAGCAGCTCCAGGCAAAAGTCCTGGCTTTAGAAAGATACCTAAAAGATCAACAGCTCCTAAGGATTTAAAGTTGCTCTGGAAAACTCATTTGCACCACTAATGTGCCCTGGAATATTAGTTGGAGCCCTAGATGGAATAGATCTCTAGATAAGATTTAGACTAACATGACCTAGAAGCAGTAAGAAAAAGAAATTGACAATTACACAGACATAATATATAACTTAATTGAACAATCACAGAACCAACAAGAACAGAATGAACAAGACTTATTGGCATTAGATAAGTAGGCAAGTTTGTAAAATTAGTTTGACATTACACAGTAGCTATAGTATATAAAAATATTCATAATAATAGTAAGAGGCTTGATAAGTTTAAGAATAGTTTTTACTATACTGTCTATAGTGAATAAAGTTAGGCAAGGATACTCACCATTGTCATTGCAGACCCTCCTCCCAACCCAGAGAGGACCCGACAGGCCCGAAAGAACAGAAGAAAGAGGTAGAAAGAAAGACAGAGGCACATCCACGAGATTAGTGCATAGATTCTTAGCACTCATCTAGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAAAGACTTACTCTTAATTGCGGCGAGAATTGTAGAACTTCTAGGACGCAGAAAGTAAGAAGCACTGAAGTATTAGTAGAATCTCCTGCAGTATTAGAGTCAGGAAATAAAGAATAGTGCAGTTAGCTTGCTCAACACCACAGCAATAGCAGTAGCTGAGAGGACAGATAAAATTATAGAAGTATTACAAAGAGGCTTTAGAGCTATTCTCCACATACCTACACGAATAAGACAGGGCTTAGAAAAGGCTTTGCTATAA"
@@ -1989,7 +1989,7 @@
             "orientation": "forward",
             "start": 7934,
             "end": 8027,
-            "distance": 1.0,
+            "distance": 0.6866666666666661,
             "protein": "RPSSQPREDPTGPKEQKKEVERKTEAHPRD",
             "aminoacids": "RPSSQPREDPTGPKEQKKEVERKTEAHPRD*",
             "nucleotides": "AGACCCTCCTCCCAACCCAGAGAGGACCCGACAGGCCCGAAAGAACAGAAGAAAGAGGTAGAAAGAAAGACAGAGGCACATCCACGAGATTAG"
@@ -2009,7 +2009,7 @@
             "orientation": "forward",
             "start": 8609,
             "end": 8996,
-            "distance": 1.7137254901960792,
+            "distance": 1.6390243902439028,
             "protein": "MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR",
             "aminoacids": "MTYKRALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFR*CFKLVPVDPDKVEEASVRENNCLLSPENLHRMEDEHREVLQWRFDSRLAFHHIARELHPEYYKDC*",
             "nucleotides": "ATGACTTACAAGAGAGCTCTAGATATTAGCCACTTTTTAAAAGAAAAAGGGGGACTGGATGGGCTAATTTACTCCAAAAGAAGACAAGACATCCTTGATCTGTGGCTCTACAACACACAAGGCTACTTCCCTGACTGGCAGAACTACACACCAGGGCCAGGAGTCAGATTTCCACTGTGTTTTAGATAGTGCTTCAAGCTAGTACCAGTTGATCCAGATAAAGTAGAAGAGGCCAGTGTAAGAGAGAACAACTGCTTGTTAAGCCCCGAAAACCTGCATAGAATGGAGGACGAACACAGAGAAGTATTGCAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACATAGCCCGAGAGCTGCATCCGGAGTATTACAAGGACTGCTGA"
@@ -2243,19 +2243,19 @@
         {
             "name": "gag",
             "orientation": "forward",
-            "start": 291,
-            "end": 1650,
-            "distance": 2.122400000000001,
+            "start": 0,
+            "end": 1557,
+            "distance": 2.1186000000000007,
             "protein": "MVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA",
-            "aminoacids": "MLTGLYILTILFNPRITHLL*ISPTGIGGLFVIHPICS*RVLVVPAISLPLGSLIWPGATGPACTGCNLSHSAASSLMVSFNICIAA*CPPTVFSMVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA*CTICPWRFCTIG*FWLTWLLFPAPAAACCAFILLLFCSSSILSSAPLVSCISIL*CIQ*RTATVLYNDLSSSDPVWRDGCSCPSICLQPSDVSNRPGLTANRSSSLLAHTRCFNLYFFFPPGLNRIFSHWSNFPPLNTDALAPISLLLASAR*KLFWRTHQSPKQ*AK*IQLP**CRKAILGTKRRLLSVSTVVK*GI*QKIAGPPGERAVGNVDRKDTR*KIVVRDRLIF*GNSGLPTRGGQGISFRADQSQQPHQRRASGLGKRQQLPLRSRSR*TGNYIP*LPSNHSLATTPRLNKSRGATKGSSIRYRSR*",
-            "nucleotides": "ATGCTGACAGGACTATACATTCTTACTATTTTATTTAATCCCAGGATTACCCATCTTTTATAGATATCTCCTACTGGGATAGGTGGATTATTTGTCATCCATCCTATTTGTTCCTGAAGGGTACTAGTAGTTCCTGCTATATCACTTCCCCTTGGTTCTCTCATTTGGCCTGGTGCAACAGGCCCTGCATGCACTGGATGCAATCTATCCCATTCTGCAGCTTCCTCATTGATGGTCTCTTTTAATATTTGCATTGCTGCTTGATGTCCCCCCACTGTATTTAGCATGGTGTTTATATCTTGTGGGGTGGCTCCTTCTGCTAATGCTGAAAACATAGGTATTACTTCTGGGCTAAAAGCCTTTTCTTCTACTACTTTTACCCATGCATTTAAAGTTCTAGGTGACATGGCCTGATGTACCATTTGCCCCTGGAGGTTTTGCACTATAGGGTAGTTTTGGCTGACCTGGCTGTTATTTCCTGCGCCAGCTGCTGCTTGCTGTGCTTTCATCTTGCTTTTGTTTTGCTCTTCCTCTATCTTATCTAGCGCTCCCTTGGTGTCTTGTATCTCTATCCTTTGATGTATACAATAGAGGACCGCTACTGTATTATATAATGATTTAAGCTCTTCTGACCCTGTTTGGAGGGATGGCTGTAGCTGTCCCAGTATTTGTCTACAGCCTTCTGATGTTTCTAACAGGCCAGGATTAACTGCGAATCGTTCTAGCTCCCTGCTTGCCCATACTAGATGTTTTAACCTATATTTTTTCTTTCCTCCTGGCCTTAACCGAATTTTTTCCCATTGGTCTAATTTTCCCCCGCTTAATACTGACGCTCTCGCACCCATCTCTCTCCTTCTAGCCTCCGCTAGGTAAAAACTTTTTTGGCGTACTCACCAGTCGCCGAAGCAATGAGCCAAGTAAATTCAACTACCGTAATGATGCAGAAAGGCAATTTTAGGAACCAAAAGAAGACTGTTAAGTGTTTCAACTGTGGTAAAATAGGGCATATAGCAAAAAATTGCAGGGCCCCCAGGAGAAAGGGCTGTTGGAAATGTGGACAGGAAGGACACCAGATGAAAGATTGTAGTGAGAGACAGGCTAATTTTTTAGGGAAACTCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAAGAGACAGCAACTCCCCCTCAGAAGCAGGAGCCGATAGACAGGGAACTATATTCCTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCTCAATAAAAGTAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGA"
+            "aminoacids": "PESESRTREVLSTQDSAC*ALWPGPPTP*HAVIISSSVAAGPNAFKIVLQSGFAFWTNKVSVIQFFTSCEACSALRVL*NRST*SLKGSFGPCFMSKMLTGLYILTILFNPRITHLL*ISPTGIGGLFVIHPICS*RVLVVPAISLPLGSLIWPGATGPACTGCNLSHSAASSLMVSFNICIAA*CPPTVFSMVFISCGVAPSANAENIGITSGLKAFSSTTFTHAFKVLGDMA*CTICPWRFCTIG*FWLTWLLFPAPAAACCAFILLLFCSSSILSSAPLVSCISIL*CIQ*RTATVLYNDLSSSDPVWRDGCSCPSICLQPSDVSNRPGLTANRSSSLLAHTRCFNLYFFFPPGLNRIFSHWSNFPPLNTDALAPISLLLASAR*KLFWRTHQSPKQ*AK*IQLP**CRKAILGTKRRLLSVSTVVK*GI*QKIAGPPGERAVGNVDRKDTR*KIVVRDRLIF*GNSGLPTRGGQGISFRADQSQQPHQRRASGLGKRQQLPLRSRSR*TGNYIP*",
+            "nucleotides": "CCTGAAAGCGAAAGTAGAACCAGAGAAGTTCTCTCGACGCAGGACTCGGCTTGCTGAGCTTTATGGCCGGGTCCCCCCACTCCCTGACATGCTGTCATCATTTCTTCTAGTGTAGCTGCTGGTCCCAATGCTTTTAAAATAGTCTTACAATCTGGGTTTGCATTTTGGACCAACAAGGTTTCTGTCATCCAATTTTTTACATCCTGTGAAGCTTGCTCGGCTCTTAGGGTTTTATAGAACCGGTCTACATAGTCTCTAAAGGGTTCCTTTGGTCCTTGTTTTATGTCCAAAATGCTGACAGGACTATACATTCTTACTATTTTATTTAATCCCAGGATTACCCATCTTTTATAGATATCTCCTACTGGGATAGGTGGATTATTTGTCATCCATCCTATTTGTTCCTGAAGGGTACTAGTAGTTCCTGCTATATCACTTCCCCTTGGTTCTCTCATTTGGCCTGGTGCAACAGGCCCTGCATGCACTGGATGCAATCTATCCCATTCTGCAGCTTCCTCATTGATGGTCTCTTTTAATATTTGCATTGCTGCTTGATGTCCCCCCACTGTATTTAGCATGGTGTTTATATCTTGTGGGGTGGCTCCTTCTGCTAATGCTGAAAACATAGGTATTACTTCTGGGCTAAAAGCCTTTTCTTCTACTACTTTTACCCATGCATTTAAAGTTCTAGGTGACATGGCCTGATGTACCATTTGCCCCTGGAGGTTTTGCACTATAGGGTAGTTTTGGCTGACCTGGCTGTTATTTCCTGCGCCAGCTGCTGCTTGCTGTGCTTTCATCTTGCTTTTGTTTTGCTCTTCCTCTATCTTATCTAGCGCTCCCTTGGTGTCTTGTATCTCTATCCTTTGATGTATACAATAGAGGACCGCTACTGTATTATATAATGATTTAAGCTCTTCTGACCCTGTTTGGAGGGATGGCTGTAGCTGTCCCAGTATTTGTCTACAGCCTTCTGATGTTTCTAACAGGCCAGGATTAACTGCGAATCGTTCTAGCTCCCTGCTTGCCCATACTAGATGTTTTAACCTATATTTTTTCTTTCCTCCTGGCCTTAACCGAATTTTTTCCCATTGGTCTAATTTTCCCCCGCTTAATACTGACGCTCTCGCACCCATCTCTCTCCTTCTAGCCTCCGCTAGGTAAAAACTTTTTTGGCGTACTCACCAGTCGCCGAAGCAATGAGCCAAGTAAATTCAACTACCGTAATGATGCAGAAAGGCAATTTTAGGAACCAAAAGAAGACTGTTAAGTGTTTCAACTGTGGTAAAATAGGGCATATAGCAAAAAATTGCAGGGCCCCCAGGAGAAAGGGCTGTTGGAAATGTGGACAGGAAGGACACCAGATGAAAGATTGTAGTGAGAGACAGGCTAATTTTTTAGGGAAACTCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAAGAGACAGCAACTCCCCCTCAGAAGCAGGAGCCGATAGACAGGGAACTATATTCCTTAG"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 1393,
             "end": 4405,
-            "distance": 0.19182452642073788,
+            "distance": 0.19680957128614174,
             "protein": "FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED",
             "aminoacids": "FFRETLAFPQGEAREFPSEQTRANSPTRGELQVWGRDSNSPSEAGADRQGTIFLSFPQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEMCLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVRLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPDMVIYQYMDDLYIGSDLELGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVVPLTREAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARIKGTHTNDVKQLTQAVQKIATESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRDTKLGKAGYVTDRGRQKIVPLTDTTNQKTELQAIYLALQDSGSEVNIVSDSQYAIGILQAQPDKSESELVNQIIEQLIKKEKVYLTWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVNTIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGRYSAGERIVDMIASDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED*",
             "nucleotides": "TTTTTTAGGGAAACTCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAGGAGAGCTTCAGGTTTGGGGAAGAGACAGCAACTCCCCCTCAGAAGCAGGAGCCGATAGACAGGGAACTATATTCCTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCTCAATAAAAGTAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGTGTTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAATATGATCAGATACCCATAGAAATCTATGGACATAAAGCTATAGGTACAGTGTTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATTTGTTGACTCAGATTGGGTGCACTTTAAATTTTCCCATTAGTCCTATCGAAACTGTACCAGTAAGATTAAAGCCAGGAATGGATGGCCCAAAAATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAGATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGGGAACTTAATAAGAGAACTCAAGATTTCTGGGAAGTTCAATTGGGAATACCGCATCCCGCAGGATTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCATTAGATAAAGACTTTAGGAAGTATACTGCATTTACCATACCCAGTGTAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAGCTAGCATGACAAAAATTTTAGAGCCTTTTAGGAAGCAAAATCCAGACATGGTTATTTATCAATACATGGATGATCTATATATAGGATCTGACTTGGAATTAGGACAGCATAGGACAAAAATAGAGGAACTGAGACAACATCTATTGAGGTGGGGGTTTACCACACCAGACAAGAAGCATCAGAAAGAACCTCCATTCCTCTGGATGGGGTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAACACTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTAGGAAAATTAAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAGGCAGTTATGTAAACTCCTTAGAGGAACCAAATCACTAACAGAAGTAGTACCACTAACAAGAGAGGCAGAGCTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCGGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAATTACAAAAGCAGGGACAAGGCCAGTGGACTTATCAGATTTATCAAGAACCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAATAAAGGGTACCCACACTAATGATGTAAAACAATTAACACAGGCTGTGCAAAAAATAGCCACAGAAAGCATAGTAATATGGGGAAAAACTCCTAAATTTAGACTACCCATACAAAAAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATCCCTGAGTGGGAGTTTGTTAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGACCCCATAGTAGGAGCAGAAACATTCTATGTCGATGGGGCAGCCAATAGGGATACTAAATTAGGAAAAGCAGGATATGTTACTGACAGGGGAAGACAAAAAATTGTCCCCCTAACTGACACAACAAATCAGAAGACTGAGTTACAAGCAATTTACCTAGCTCTGCAGGATTCAGGATCAGAAGTAAACATAGTATCAGACTCACAGTATGCAATAGGAATTCTTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGAAAAAGTCTACCTGACATGGGTGCCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTATTATTCTTAGATGGAATAGATAAGGCCCAAGAAGAACATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCCATAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGTTAAAAGGAGAAGCCATACATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTGGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTGGCCAGTGGATATATTGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGAAACAGCATATTTTATCTTAAAATTAGCAGGAAGATGGCCAGTAAACACAATACATACAGACAATGGCAGCAACTTCACTAGCACTGCGGTTAAAGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGGGATCAAGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGAGGTACAGTGCAGGGGAAAGAATAGTAGACATGATAGCATCAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAACAGTGAAATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGACTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGATTAA"
@@ -2265,7 +2265,7 @@
             "orientation": "forward",
             "start": 4349,
             "end": 4928,
-            "distance": 0.43229166666666674,
+            "distance": 0.546875,
             "protein": "MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRINAWKSLVKHHMHVSRKVERWVYKHHYESTNPRISSEVHIPLGDARLKITTYWGLHTGERDWHLGQGVSIEWRKKSYNTQVDPEVADQLIHLYYFDCFSESAIRKAIVGHRVSPSCEYQAGHNKVGSLQYLALAALVKSKKTKPPLPSVTKLTEDRWNKPQRTKGRRGNHIMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGATTAATGCATGGAAAAGCTTAGTAAAGCACCATATGCATGTTTCAAGGAAAGTTGAGAGATGGGTTTATAAACATCACTATGAAAGTACTAATCCAAGAATAAGTTCAGAAGTACACATCCCACTAGGGGATGCTAGATTAAAAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGCCAGGGAGTCTCCATAGAATGGAGAAAAAAGAGCTATAATACACAAGTAGACCCTGAAGTAGCAGACCAACTAATCCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAAAGCCATAGTAGGACATAGAGTTAGTCCTAGTTGTGAATATCAAGCAGGACATAACAAGGTAGGATCCCTACAGTACTTGGCATTAGCAGCATTAGTAAAATCAAAAAAGACAAAGCCACCTTTGCCTAGCGTTACGAAGCTGACGGAGGATAGATGGAACAAGCCCCAGAGGACCAAGGGCCGCAGAGGGAACCATATAATGAATGGGCACTAG"
@@ -2274,18 +2274,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 4867,
-            "end": 5161,
-            "distance": 0.5576923076923082,
+            "end": 5158,
+            "distance": 0.48333333333333317,
             "protein": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP",
-            "aminoacids": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP*P",
-            "nucleotides": "ATGGAACAAGCCCCAGAGGACCAAGGGCCGCAGAGGGAACCATATAATGAATGGGCACTAGAGCTTTTAGAGGAGCTTAAGAGAGAAGCTGTTAGACATTTCCCTAGGATATGGCTTCAGAGCTTAGGACAATACGTCTATGAAACTTATGGGGATACTTGGACAGGAGTGGAAGCCATAATAAGAATTTTGCAACAAATGCTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATTATTCGACGAGGGAGAACAAGAAATGGAGCCAGTAGACCCTAGCCT"
+            "aminoacids": "MEQAPEDQGPQREPYNEWALELLEELKREAVRHFPRIWLQSLGQYVYETYGDTWTGVEAIIRILQQMLFIHFRIGCQHSRIGIIRRGRTRNGASRP*",
+            "nucleotides": "ATGGAACAAGCCCCAGAGGACCAAGGGCCGCAGAGGGAACCATATAATGAATGGGCACTAGAGCTTTTAGAGGAGCTTAAGAGAGAAGCTGTTAGACATTTCCCTAGGATATGGCTTCAGAGCTTAGGACAATACGTCTATGAAACTTATGGGGATACTTGGACAGGAGTGGAAGCCATAATAAGAATTTTGCAACAAATGCTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATTATTCGACGAGGGAGAACAAGAAATGGAGCCAGTAGACCCTAG"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5138,
             "end": 5357,
-            "distance": 0.5972222222222225,
+            "distance": 0.6111111111111112,
             "protein": "MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ",
             "aminoacids": "MEPVDPSLAPWKHPGSQPKTACTNCYCKKCCLHCQVCFTKKGLGISYGRKKRRQRRRPPQSSKAHQNPLPKQ*",
             "nucleotides": "ATGGAGCCAGTAGACCCTAGCCTAGCGCCCTGGAAGCACCCAGGAAGTCAGCCTAAGACTGCTTGTACCAATTGCTATTGTAAAAAGTGCTGCTTACATTGCCAAGTTTGTTTCACAAAAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAAGCAGTAAGGCTCATCAAAATCCTCTACCAAAGCAGTAA"
@@ -2295,7 +2295,7 @@
             "orientation": "forward",
             "start": 5277,
             "end": 5355,
-            "distance": 0.6923076923076923,
+            "distance": 0.5769230769230769,
             "protein": "MAGRSGDSDEDLLKAVRLIKILYQSS",
             "aminoacids": "MAGRSGDSDEDLLKAVRLIKILYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAAGCAGTAAGGCTCATCAAAATCCTCTACCAAAGCAGT"
@@ -2305,7 +2305,7 @@
             "orientation": "forward",
             "start": 5369,
             "end": 5615,
-            "distance": 0.75609756097561,
+            "distance": 0.48124999999999996,
             "protein": "MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL",
             "aminoacids": "MQSLQIGAIVALVVGTIIAIVVWSIVLIEYRKILRQKKIDRIIDRIVERAEDSGNESEGDQEELSALVERGHDAPWNVNDL*",
             "nucleotides": "ATGCAATCTTTGCAAATAGGAGCAATAGTAGCATTAGTAGTAGGAACAATAATAGCAATAGTTGTGTGGTCTATAGTACTCATAGAATATAGGAAAATATTAAGACAAAAGAAAATAGATAGAATAATAGATAGAATAGTAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAAGGAGACCAGGAAGAGTTATCAGCACTGGTGGAAAGGGGGCATGATGCTCCTTGGAATGTTAATGATCTGTAG"
@@ -2315,7 +2315,7 @@
             "orientation": "forward",
             "start": 5532,
             "end": 8073,
-            "distance": 0.5280373831775704,
+            "distance": 0.5259128386336873,
             "protein": "MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL",
             "aminoacids": "MRVKETRKSYQHWWKGGMMLLGMLMICSAATNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLGNVTEDFNAWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILHCTDVNNTRNGMTGELKNCSFNITTKITNKVQKEYALFYKLDVVPINNKDNDTSFNNNSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGYAILRCNNETFSGKGPCTNVSSIQCTHGIRPVVSTQLLLNGSLAKQEVVIRSQNFSDNVKTIIVQLKTPVKINCTRPNNNTRKSIHAGPGKVIYATGEIIGDIRQAHCNISAAEWNDTLGQIVTKLQEQFGNKTIVFNQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWNNNGTNTWNSTGNITLPCKIRQIVNMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGNESESETFRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREKRAIGTLGAVFLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEISNYTQLIYTLIEESQSQQEKNEQELLALDKWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEEDGGERDRDRSTRLVTGFLPLFWDDLRSLCLFSYHRLRDLLLIAARIVELLGHRGWEILKHWWSLLQYWSQELKKSAVSLLNATAIAVAEGTDRIIEVVQRACRAILHIPVRLRQGLERALL*",
             "nucleotides": "ATGAGAGTGAAGGAGACCAGGAAGAGTTATCAGCACTGGTGGAAAGGGGGCATGATGCTCCTTGGAATGTTAATGATCTGTAGTGCTGCAACAAATTTGTGGGTCACAGTCTATTATGGGGTACCTGTATGGAAGGAAGCAACCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATACAGAGGTACATAATGTTTGGGCCACGCATGCCTGTGTACCCACGGACCCCAACCCACAAGAAGTATTATTGGGAAATGTGACAGAAGATTTTAATGCATGGAAAAATAACATGGTAGAGCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCTTAAAGCCATGTGTAAAATTAACCCCACTTTGTGTTATTTTGCATTGCACTGATGTCAACAATACTAGAAATGGGATGACAGGAGAACTAAAAAACTGCTCTTTCAATATCACCACAAAAATAACAAATAAGGTACAGAAAGAATATGCACTCTTTTATAAACTTGATGTAGTACCAATAAATAATAAGGATAATGATACTAGCTTTAATAATAATAGCTATAGGTTGATAAGTTGTAACACCTCAGTTATTACACAGGCTTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTACTGTACCCCGGCTGGTTATGCAATTCTAAGGTGTAACAATGAGACATTCAGTGGAAAAGGGCCATGTACAAATGTCAGCTCAATACAATGTACACATGGAATTAGGCCAGTAGTGTCAACTCAACTGCTGTTAAATGGCAGTCTAGCAAAACAGGAGGTAGTAATTAGATCTCAAAATTTCTCGGACAATGTTAAAACCATAATAGTACAGCTGAAGACCCCTGTAAAAATTAACTGTACAAGGCCCAATAACAATACAAGAAAAAGTATACATGCAGGACCAGGGAAAGTAATTTATGCAACAGGAGAAATAATAGGAGATATAAGACAAGCACATTGCAACATTAGTGCAGCAGAGTGGAATGATACTTTAGGACAGATAGTTACAAAATTACAAGAACAATTTGGGAATAAAACAATAGTCTTCAATCAATCGTCAGGAGGGGACCCAGAAATTGTAACACACAGTTTTAATTGTGGAGGGGAATTTTTTTACTGTAATTCAACACAACTGTTTAATAGTACTTGGAATAATAATGGTACTAATACTTGGAATAGTACAGGTAATATCACACTCCCATGTAAAATAAGGCAAATTGTAAACATGTGGCAGAAAGTAGGAAAAGCAATGTATGCTCCTCCCATCCGTGGACAAATTAAATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGTAACGAGAGTGAGAGCGAAACCTTCAGACCTGGCGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAGAATTGAACCATTAGGACTAGCACCCACTAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAATAGGAACACTGGGAGCTGTGTTCCTTGGGTTCTTGGGAACAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGGCAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATCTGCTGAAGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATTAAACAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTACAGGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGCAATAAATCTCTGAATGAAATTTGGGATAACATGACCTGGATGGAGTGGGAAAAAGAAATTAGTAATTACACACAATTAATATACACTTTAATTGAAGAATCGCAGAGCCAGCAAGAAAAGAATGAACAAGAATTATTGGCACTAGATAAGTGGGACAGCTTGTGGAGTTGGTTTAGTATAACAAAATGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTAATAGGGTTAAGAATAGTTTTTACTGTACTTTCTATAGTAAATAGAGTTAGGCAGGGATATTCACCATTGTCATTTCAGACCCGCTTCCCAGCCCCGAGGGGACCCGACAGGCCCGAAGGAATCGAAGAAGACGGTGGAGAGAGAGACAGAGACAGATCCACACGCTTAGTAACCGGATTCTTACCACTTTTCTGGGACGACCTGAGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACACAGGGGGTGGGAAATCCTCAAACATTGGTGGAGTCTCCTACAATATTGGAGTCAGGAACTAAAAAAAAGTGCTGTTAGCTTGCTCAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTAGTACAAAGAGCTTGTAGAGCTATTCTCCACATACCTGTAAGACTAAGACAAGGCTTAGAAAGAGCTTTGCTATAA"
@@ -2325,7 +2325,7 @@
             "orientation": "forward",
             "start": 7654,
             "end": 7750,
-            "distance": 0.4866666666666659,
+            "distance": 0.5,
             "protein": "RPASQPRGDPTGPKESKKTVERETETDPHA",
             "aminoacids": "RPASQPRGDPTGPKESKKTVERETETDPHA**",
             "nucleotides": "AGACCCGCTTCCCAGCCCCGAGGGGACCCGACAGGCCCGAAGGAATCGAAGAAGACGGTGGAGAGAGAGACAGAGACAGATCCACACGCTTAGTAA"
@@ -2345,7 +2345,7 @@
             "orientation": "forward",
             "start": 8074,
             "end": 8695,
-            "distance": 0.5601626016260086,
+            "distance": 0.4668269230769231,
             "protein": "MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC",
             "aminoacids": "MGGKWSKSSVVGWPAVRERIRRAGPAAEGVGAVSRDLDKHGAITSNNTPATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGMIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPLETEQVEAATGGENNCLLHPLNQHGMDDPEREVLMWKFDSSLAFHHRAKELHPEYYKDC*",
             "nucleotides": "ATGGGTGGCAAGTGGTCAAAAAGTAGTGTGGTTGGATGGCCTGCTGTAAGGGAAAGAATAAGAAGAGCTGGGCCAGCAGCAGAAGGGGTGGGAGCAGTATCTCGAGACCTGGACAAACATGGAGCAATCACAAGTAACAATACACCAGCTACTAATGCTGCTTGTGCCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTTAGGCCTCAAGTACCTTTAAGACCAATGACTTACAAGGGAGCTTTGGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGATGATATACTCCCAGCAAAGACAAGATATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGACCAGGGGTCAGGTTTCCACTGACCTTTGGATGGTGCTTCAAACTAGTACCACTTGAGACAGAGCAGGTAGAAGCGGCCACTGGAGGAGAGAACAACTGCTTGTTACACCCTTTGAACCAGCATGGGATGGATGACCCGGAGAGAGAAGTACTAATGTGGAAGTTTGACAGCAGCCTAGCATTTCATCACAGAGCCAAAGAGCTGCATCCGGAGTACTACAAAGACTGCTGA"
@@ -2693,7 +2693,7 @@
             "orientation": "forward",
             "start": 221,
             "end": 1736,
-            "distance": 0.3545098039215693,
+            "distance": 0.24380000000000024,
             "protein": "MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP",
             "aminoacids": "MGARASVLSGGELDRWEKIYLRPGGKKKYRLKHIVWASRELERFAVNPGLLESSEGCRQILGQLQPALQTGSEELRSLYNTVAVLYCVHPRINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINAEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNFRNQRRNVKCFNCGKEGHTAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*K*",
             "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGCGGAGAATTAGATAGATGGGAAAAAATTTACCTAAGGCCAGGGGGAAAGAAAAAATATAGATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTCAACCCTGGCCTGTTAGAGTCATCAGAAGGCTGCAGGCAAATTCTGGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAGTCCTCTATTGCGTACATCCAAGGATAAATGTAAAAGACACCAAAGAAGCTCTAGACAAAATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAACAAGCAGCAGCTGACACAGGAAACAGCAGCAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTACAGGGGCAAATGGTACATCAACCCTTATCACCTAGAACTTTAAATGCATGGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCACTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAGATGTTAAAAGAAACCATCAATGCTGAGGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGCCCTATTGCACCAGGCCAGATGAGGGAACCAAGGGGAAGTGACATAGCAGGAACCACTAGTACCCTTCAGGAACAAATAGGATGGATGACACATAATCCACCTATCCCAGTAGGAGATATCTATAAAAGATGGATAATCCTGGGGTTAAATAAAATAGTAAGAATGTATAGCCCTGTCAGCATTTTGGACATAAGACAAGGACCAAAGGAACCCTTTAGGGATTATGTAGACCGGTTCTATAAAACTCTAAGGGCTGAGCAAGCGTCACAGGATGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAATCCAGATTGTAAGACCATTTTAAAAGCATTAGGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGGGGACCCGGCCACAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAAATCAGCCTCCATAATGGTGCAGGGAGGCAATTTTAGGAACCAAAGAAGGAATGTTAAGTGTTTCAATTGTGGCAAAGAAGGACACACAGCCAAAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAGGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAGGGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGGGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAG"
@@ -2703,7 +2703,7 @@
             "orientation": "forward",
             "start": 1522,
             "end": 4534,
-            "distance": 0.2466929911154987,
+            "distance": 0.20438683948155534,
             "protein": "FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED",
             "aminoacids": "FFREDLAFPQGKAREFSPEQTRANSPASRELQVWGRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICAEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPDIVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLGWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTINDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGAYYDPSKDLIAEVQKQGGDQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIALEAIVIWGKTPKFKLPIQKETWEMWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLMDTTNQRTELHAIHLALQDSGSTVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKIYLAWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEPMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYYRDSREPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAGGGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTGGGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAGGAGGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACCCATAGAAATTTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCAGTCAACATAATTGGAAGAAATCTGTTGACCCAGCTTGGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAGGCATTAATAGAAATTTGTGCAGAAATGGAAAAGGAAGGGAAAATTACAAAAATTGGGCCTGAGAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCCGAGAACTTAATAAGAGAACACAAGACTTCTGGGAAGTTCAACTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCATATTTTTCAGTTCCTTTAGACAAAGACTTCAGAAAGTATACTGCATTTACCATACCCAGTATAAACAATGAGGCACCAGGAGTTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAGGAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGATTTAGAAATAGAGCAGCACAGAACAAAAATAGAGGAACTGAGACAACATCTGTTGGGGTGGGGACTCACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATACAGCTGCCAGACAAAGACAGCTGGACTATCAATGACATACAGAAGTTAGTGGGAAAGTTGAATTGGGCAAGCCAAATCTATCCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGCATATTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAGCAGGGGGGAGACCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCCTAGAAGCCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTACCTATACAAAAGGAAACATGGGAAATGTGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAGACTAAATTAGGAAAAGCAGGGTATGTTACGGACAGAGGAAGACAAAAGGTTGTCTCCCTAATGGACACAACAAATCAGAGGACTGAGTTACACGCTATTCATCTAGCTTTGCAGGATTCAGGATCAACAGTAAACATAGTGACAGACTCACAATATGCCTTAGGGATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGCTAATAAAAAAGGAAAAGATTTACCTGGCATGGGTCCCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTAGTGGAATCAGAAAAGTACTATTTCTGGATGGAATAGATAAGGCCCAAGAAGAACATGAAAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAGGAGAACCTATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATACATAGAAGCAGAAGTTATTGCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTGGCAGGAAGATGGCCAGTAAAAATAATACATACAGACAATGGCAGCAATTTCACCAGCACTACGGTTAAGGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGTATTCCCTACAATCCTCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTTCAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGAACCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGATATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCCTTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
@@ -2713,7 +2713,7 @@
             "orientation": "forward",
             "start": 4478,
             "end": 5057,
-            "distance": 0.46354166666666674,
+            "distance": 0.38020833333333326,
             "protein": "MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRIRTWNSLVKHHMHISKKAQRWVYRHHYESHNPKTSSEVHIPLGEARLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVSPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKGSHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATGGGTTTACAGACATCACTATGAAAGCCATAATCCAAAAACAAGTTCAGAAGTACACATCCCATTAGGGGAAGCAAGATTGGTAATAAAAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGCCAGGGAGTATCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGGCCTGGCAGACCAACTAATTCACCTGTATTATTTTGATTGTTTTTCAGAATCTGCTATAAGGAATGCCATATTAGGACATAGAGTTAGTCCTAGGTGTGAATATCAGGCAGGACATAACAAGGTAGGATCCCTACAATACTTGGCATTAACAGCATTAATAACACCAAAAAGGAGAAAGCCACCTTTGCCCAGTGTTACAAAATTAACAGAGGACAGATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAG"
@@ -2722,18 +2722,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 4996,
-            "end": 5287,
-            "distance": 0.36458333333333326,
+            "end": 5290,
+            "distance": 0.4807692307692313,
             "protein": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS",
-            "aminoacids": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*",
-            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAACTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGGGGTGGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
+            "aminoacids": "MEQVPEDQGPQREPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAGVEAIIRTLQQLLFIHFRIGCQHSRIGIIRQRRARNGASRS*L",
+            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAACTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGGGGTGGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTGGGTGTCAACATAGCAGGATAGGAATTATTCGACAGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAGCTT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5267,
             "end": 5486,
-            "distance": 0.5416666666666667,
+            "distance": 0.5972222222222223,
             "protein": "MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ",
             "aminoacids": "MEPVDPSLEPWKHPGSQPMTACNNCYCKRCCFHCQVCFTRKGLGISYGRKKRRQRRRASHSSQNHQAALPEQ*",
             "nucleotides": "ATGGAGCCAGTAGATCCTAGCTTAGAGCCCTGGAAACATCCAGGAAGTCAACCTATGACTGCTTGTAACAATTGCTATTGTAAACGGTGTTGCTTTCATTGCCAAGTTTGCTTCACAAGAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGTAA"
@@ -2743,7 +2743,7 @@
             "orientation": "forward",
             "start": 5406,
             "end": 5484,
-            "distance": 0.5384615384615385,
+            "distance": 0.6538461538461537,
             "protein": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "aminoacids": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGT"
@@ -2753,7 +2753,7 @@
             "orientation": "forward",
             "start": 5498,
             "end": 5744,
-            "distance": 0.4444444444444444,
+            "distance": 0.751219512195122,
             "protein": "MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM",
             "aminoacids": "MHALEIAAIVGLVVAAIIAIVVWSIVLIEYRKILRQRKIDRLIDRIRERAEDSGNESDGDQEELSALVEMGHLVPWDGDDM*",
             "nucleotides": "ATGCATGCCTTAGAAATAGCAGCAATAGTAGGATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTGGTCTATAGTATTAATAGAATATAGGAAAATTTTAAGACAAAGGAAAATAGACAGGTTAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAAAGTGACGGGGACCAGGAGGAGTTATCAGCACTTGTGGAGATGGGGCATCTTGTTCCTTGGGATGGTGATGATATGTAG"
@@ -2763,7 +2763,7 @@
             "orientation": "forward",
             "start": 5661,
             "end": 8262,
-            "distance": 0.5424561403508774,
+            "distance": 0.5663551401869167,
             "protein": "MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL",
             "aminoacids": "MKVTGTRRSYQHLWRWGILFLGMVMICSANNLWVTVYYGVPVWKEATTTLFCASDAKAYETEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDNLNLNRPNNNTCSNNTNYNITEKGEIKNCSFNVTTGIRDRVTKEHALFYKLDVVPIDEGSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCKDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPGRAFYGTDIIGDIRQAHCNISGKDWNDTLKQIVIKLKEKFENKTIVFTQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNNSTWNGTDNWNGTESNSTITLPCRIKQIINLWQEVGRAMYAPPIQGQIRCSSNITGLLLVRDGGSNNSSNDTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTHAKRRVVQREKRAIGLGAFFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNISWSPRWNRSLDEIWTNMTWKQWEKEIDNYTDIIYNLIEQSQNQQEQNEQDLLALDKWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIVFTILSIVNRVRQGYSPLSLQTLLPTQRGPDRPEGTEEGGGERDRGTSTRLVHGFLALIWDDLRSLFLFSYHRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVLQRGFRAILHIPTRIRQGLERALL*",
             "nucleotides": "ATGAAAGTGACGGGGACCAGGAGGAGTTATCAGCACTTGTGGAGATGGGGCATCTTGTTCCTTGGGATGGTGATGATATGTAGTGCCAACAACTTGTGGGTCACAGTCTATTATGGGGTACCTGTATGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGAGACAGAGAAGCATAATGTTTGGGCAACCCATGCCTGTGTACCCACAGACCCCAGCCCACAGGAAGTAGCATTGGAAAATGTGACAGAAACATTTAACATGTGGAAAAATGACATGGTAGAGCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTGAAACTAACCCCACTCTGTGTTACTTTAAATTGCACTGATAATTTAAATCTAAATCGCCCTAACAATAATACTTGTAGTAATAATACTAATTATAATATAACGGAAAAAGGAGAAATAAAAAACTGCTCTTTCAATGTCACCACAGGAATAAGAGATAGGGTGACAAAAGAACATGCACTTTTCTATAAACTTGATGTAGTACCAATAGATGAAGGTAGTGGAAATACTACGGGCAAATATAGGATGATAAATTGTAACACCTCAGTCATTACACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTTTTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTAAAGATAAGAAATTCAATGGAACAGGAGAATGTAGAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGCTGAACGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGCCAATCTCTCGAACAATGCTAAAACCATAATAGTACAGCTGAATAAATCTGTAAAAATTAATTGTACAAGACCCAACAATAATACAAGAAGAAGTATACACATAGGACCAGGGAGGGCATTTTATGGAACAGACATAATAGGAGATATAAGACAAGCGCATTGTAACATTAGTGGGAAAGATTGGAATGACACTTTAAAACAGATAGTTATAAAATTAAAAGAAAAATTTGAGAATAAAACAATAGTCTTTACTCAATCCTCAGGAGGGGACCCAGAGATAGTGATGCATAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACAACACAGCTGTTTAATAGTACTTGGAATAATAGTACTTGGAATGGTACTGACAATTGGAATGGTACTGAATCAAATAGCACTATCACACTCCCATGCAGAATAAAACAAATTATAAACTTGTGGCAGGAAGTAGGAAGAGCAATGTATGCCCCTCCCATCCAAGGGCAAATTAGATGTTCATCAAATATTACAGGGCTGCTGCTAGTAAGAGATGGTGGGAGCAACAATAGTAGTAATGATACAGAGACCTTCAGGCCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTCAAAATTGAACCATTAGGAATAGCACCCACCCATGCAAAGAGAAGAGTGGTGCAAAGGGAAAAAAGAGCAATAGGACTTGGAGCTTTCTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAGTGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAAAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTTTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTAATGTGCCCTGGAATATTAGTTGGAGCCCTAGATGGAATAGATCTCTAGATGAGATTTGGACTAACATGACCTGGAAGCAGTGGGAAAAGGAAATTGACAATTACACAGACATAATATATAACCTAATTGAACAATCACAGAACCAACAAGAACAGAATGAACAAGACTTATTGGCATTAGATAAGTGGGCAAGTTTGTGGAATTGGTTTGACATTACACAGTGGCTATGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGATAGGTTTAAGAATAGTTTTTACTATACTGTCTATAGTGAATAGAGTTAGGCAGGGATACTCACCATTGTCATTGCAGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAGTGCAGTTAGCTTGCTCAACACCACAGCAATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTATTACAAAGAGGCTTTAGAGCTATTCTCCACATACCTACACGAATAAGACAGGGCTTAGAAAGGGCTTTGCTATAA"
@@ -2773,7 +2773,7 @@
             "orientation": "forward",
             "start": 7843,
             "end": 7936,
-            "distance": 0.8,
+            "distance": 0.4866666666666659,
             "protein": "RPSSQPRGDPTGPKEQKKEVERETEAHPRD",
             "aminoacids": "RPSSQPRGDPTGPKEQKKEVERETEAHPRD*",
             "nucleotides": "AGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAG"
@@ -2782,18 +2782,18 @@
             "name": "rev_exon2",
             "orientation": "forward",
             "start": 7844,
-            "end": 8129,
-            "distance": 0.4945054945054945,
+            "end": 8120,
+            "distance": 0.4285714285714286,
             "protein": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE",
-            "aminoacids": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*CS*",
-            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAGTGCAGTTAG"
+            "aminoacids": "DPPPNPEGTRQARRNRRRRWRERQRHIHEISAWILSTHLGRPAEPVPLQLPPLERLTLDCGEDCGTSGTQGVGSTEVLVESPAVLESGNKE*",
+            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAGGAACAGAAGAAGGAGGTGGAGAGAGAGACAGAGGCACATCCACGAGATTAGTGCATGGATTCTTAGCACTCATCTGGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGCGGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCACTGAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAAATAAAGAATAG"
         },
         {
             "name": "nef",
             "orientation": "forward",
             "start": 8263,
             "end": 8911,
-            "distance": 0.705392156862745,
+            "distance": 0.7471544715447078,
             "protein": "MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC",
             "aminoacids": "MGNKLSRGLRAGWPTIRERMRRARPVREPEPAAAGVGAASRDLERHGALTSSNTAATNADVACLEAQQEEEEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPGPGVRFPLCFGWCFKLVPVDPDKVEEASVGENNCLLSPENLHGMEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*",
             "nucleotides": "ATGGGTAACAAGTTGTCAAGAGGGCTCAGGGCTGGATGGCCTACCATAAGGGAGAGAATGAGACGAGCTAGGCCAGTAAGAGAGCCAGAGCCAGCAGCAGCTGGGGTGGGAGCAGCATCTCGAGACCTGGAAAGACATGGAGCACTTACAAGTAGCAATACAGCAGCTACCAATGCTGATGTTGCCTGCCTGGAAGCACAACAGGAGGAGGAAGAGGTGGGTTTTCCAGTCAGACCTCAGGTACCTTTAAGGCCAATGACTTACAAGGGAGCTCTAGATATTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGATGGGCTAATTTACTCCAAAAGAAGACAAGACATCCTTGATCTGTGGCTCTACAACACACAAGGCTACTTCCCTGACTGGCAGAACTACACACCAGGGCCAGGAGTCAGATTTCCACTGTGTTTTGGATGGTGCTTCAAGCTAGTACCAGTTGATCCAGATAAGGTAGAAGAGGCCAGTGTAGGAGAGAACAACTGCTTGTTAAGCCCCGAGAACCTGCATGGAATGGAGGACGAACACAGAGAAGTATTGCAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTATTACAAGGACTGCTGACACTGA"
@@ -3589,7 +3589,7 @@
             "orientation": "forward",
             "start": 2,
             "end": 1697,
-            "distance": 1.8823061630218694,
+            "distance": 1.8384000000000005,
             "protein": "MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC",
             "aminoacids": "SGFSFTFKSLFGRHLGDLKAKEKPEELSRRRTRLAERARQEARRGD**VRRNF*LAEARRREIGARASVLSGGELDR*EKIYLRPGRKKKYRLKHIVWASRELERFAVNPGLLKSSEGCRQILGQLQPALQTGSEELRSLYNTIAVLYCVHQKINVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSNSQVSQNYPIVQNLQGQIVHQPISPRTLNA*VKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVRRHQAAMQMLKETINDEAAE*DRLHPVHAGPIAPGQMKEPRRSDIAGTTSTLQEQIR*MTNNPPIPVGEIYKR*IILRLNKIVKMYSPVSILDIRQRPKEPFKDYVDRFYKTLKAEQASQDVKN*MTETLLVQNANPDCKTILKALRPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTKSASIMVQGGNLKNQRKNVKCFNCGKEGHTAKNCRAPKKKGC*KCGKKGHQMKDCTKRQANFLRKIWPSHKGRPKNFLQSRPEPTAPPAESFRFKEEATAPPQKQETKDQELYPLASLRSLFGNDP*YQ*",
             "nucleotides": "TCTGGTTTCTCTTTCACTTTCAAGTCCCTGTTCGGGCGCCATCTAGGGGACCTGAAAGCGAAAGAGAAACCAGAGGAGCTCTCTCGACGCAGGACTCGGCTTGCTGAGCGCGCACGGCAAGAGGCGAGGCGCGGCGACTAGTGAGTACGCCGAAATTTTTGACTAGCAGAGGCTAGAAGGAGAGAGATAGGTGCGAGAGCGTCAGTATTAAGCGGCGGAGAATTAGATAGATAGGAAAAAATTTACCTAAGGCCAGGGAGAAAGAAAAAATATAGATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTCAACCCTGGCCTGTTAAAGTCATCAGAAGGCTGCAGGCAAATTCTAGGACAGCTACAACCAGCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAATAGCAGTCCTCTATTGTGTACATCAAAAGATAAATGTAAAAGACACCAAAGAAGCTCTAGACAAAATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGCACAACAAGCAGCAGCTGACACAGGAAACAGCAGCAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTACAAGGGCAAATAGTACATCAACCCATATCACCTAGAACTTTAAATGCATAGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCACTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGAGAAGACATCAAGCAGCCATGCAGATGTTAAAAGAAACCATCAATGATGAAGCTGCAGAATAAGATAGATTGCATCCAGTGCATGCAGGCCCTATTGCACCAGGCCAGATGAAGGAACCAAGAAGAAGTGACATAGCAGGAACCACTAGTACCCTTCAGGAACAAATAAGATAGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATAGATAATCCTGAGGTTAAATAAAATAGTAAAAATGTATAGCCCTGTCAGCATTTTGGACATAAGACAAAGACCAAAGGAACCCTTTAAGGATTATGTAGACCGGTTCTATAAAACTCTAAAGGCTGAACAAGCGTCACAGGATGTAAAAAATTAGATGACAGAAACCTTGTTAGTCCAAAATGCGAATCCAGATTGTAAGACCATTTTAAAAGCATTAAGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTAGGAGGACCCGGCCACAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAAGTCAGCCTCCATAATGGTGCAAGGAGGCAATTTAAAGAACCAAAGAAAGAATGTTAAGTGTTTCAATTGTGGCAAAGAAGGACACACAGCCAAAAATTGCAGGGCCCCTAAGAAAAAAGGCTGTTAGAAATGTGGAAAGAAAGGACACCAAATGAAAGATTGTACTAAGAGACAGGCTAATTTTTTAAGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAAAGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTAAGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAA"
@@ -3599,7 +3599,7 @@
             "orientation": "forward",
             "start": 1489,
             "end": 4579,
-            "distance": 1.995034756703078,
+            "distance": 1.9898305084745753,
             "protein": "KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK",
             "aminoacids": "FFKEDLAFPQGKAKEFSPEQTRANSPASRELQV*GRGNSSPSEAGDEGPGTVSFSFPQITLWQRPIISIKIRRQLKEALLDTGADDTVLKEINLPGK*KPKIIEGIRGFIKVRQYDQVPIKICRHKAISTVLIRPTPVNIIRRNLLTQLSCTLNFPISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALIEICAEIEKERKITKIRPKNPYNTPVFAIKKKDSTK*RKLVDFRELNKRTQDF*KVQLRIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNEAPRVRYQYNVLPQR*KGSPAIFQSSMTKILEPFRKENPDIVIYQYIDDLYVRSDLEIEQHRTKIEELRQHLLK*RLTTPDKKHQKEPPFL*ISYELHPNKWTVQPIQLPDKDS*TVNDIQKLVRKLN*ASQIYPEIKVKQLCKLLRRTKALTEVVPLTEEAELELAENKEILKEPVHRAYYDPSKDLIAEVQKQGGDQWTYQIYQKPFKNLKTKKYARTRGAHTNDVKQLTEAVQKIALEAIVI*RKTPKFKLPIQKET*EM**TEYWQAT*IPE*EFVNTPPLVKL*YQLEKEPIVRAETFYVDRAANRETKLRKARYVTDRRRQKVVSLIDTTNQRTKLHAIHLALQDSGSTVNIVTDSQYALKIIQAQPDKSESELVSQIIEQLIKKEKIYLA*VPAHKRIRRNEQVDKLVSSRIRKVLFLDRIDKAQEEHEKYHSN*RAMASDFNLPPVVAKEIVASCDKCQLKREPMHGQVDCSPGIWQLDCTHLERKIILVAVHVASRYIEAEVIAAETGQETAYFILKLAGRWPVKIIHTDNGSNFTSTTVKAAC**ARIKQKFSIPYNPQSQGVVESMNNELKKIIGQVKDQAEHLKTAVQMAVFIHNFKRKRGIGGYSAEERIIDIIATDIQTKELQKQISKIQNFQVYYRDSREPLWKGPAKLL*KGEGAVVIQDNSDIKVVPRRKAKILRDYGKQMAGDDCVASRQDED*NMEQFSKTPYAYFKESSEMSLQTSP*",
             "nucleotides": "TTTTTTAAGGAAGATTTGGCCTTCCCACAAGGGAAGGCCAAAGAATTTTCTCCAGAGCAGACCAGAGCCAACAGCCCCGCCAGCAGAGAGCTTCAGGTTTAAGGAAGAGGCAACAGCTCCCCCTCAGAAGCAGGAGACGAAGGACCAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCATAATATCAATAAAAATAAGAAGGCAACTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAAAAGAAATAAATTTGCCAGGAAAATAGAAACCAAAAATAATAGAAGGAATTAGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAAAAATTTGTAGACATAAAGCTATAAGTACAGTATTAATAAGACCTACACCAGTCAACATAATTAGAAGAAATCTGTTGACCCAGCTTAGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATAGATAGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAGGCATTAATAGAAATTTGTGCAGAAATAGAAAAAGAAAGGAAAATTACAAAAATTAGGCCTAAGAATCCATATAATACTCCAGTGTTTGCCATAAAGAAAAAAGACAGTACTAAATAGAGAAAATTAGTAGATTTCCGAGAACTTAATAAAAGAACACAAGACTTTTAAAAAGTTCAACTAAGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGTGATGCATATTTTTCAGTTCCTTTAGACAAAGACTTCAGAAAGTATACTGCATTTACCATACCCAGTATAAACAATGAGGCACCAAGAGTTAGATATCAGTACAATGTGCTTCCACAAAGATAGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAAGAAAATCCAGACATAGTTATCTATCAATACATAGATGATTTGTATGTAAGATCTGACTTAGAAATAGAGCAGCACAGAACAAAAATAGAAGAACTGAGACAACATCTGTTAAAGTAAAGACTCACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTAGATAAGTTATGAACTCCATCCTAATAAATGGACAGTACAGCCTATACAGCTGCCAGACAAAGACAGCTAGACTGTCAATGACATACAGAAGTTAGTAAGAAAGTTAAATTAGGCAAGCCAGATCTATCCAGAGATTAAAGTAAAGCAATTATGTAAACTCCTTAGAAGAACCAAAGCACTAACAGAAGTAGTACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAAGGAGATTCTAAAAGAACCAGTACATAGAGCATATTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAGCAGGGAGGAGACCAATGGACATATCAAATTTATCAGAAGCCATTTAAAAATCTGAAAACAAAGAAATATGCAAGAACGAGAGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCCTAGAAGCCATAGTAATATAGAGAAAGACTCCTAAATTTAAACTACCTATACAAAAAGAAACATAAGAAATGTAGTAGACAGAGTATTGGCAAGCCACCTAGATTCCTGAGTAGGAATTTGTCAATACCCCTCCCTTAGTAAAATTATAGTACCAGTTAGAGAAAGAACCCATAGTAAGAGCAGAAACTTTCTATGTAGATAGGGCAGCTAATAGAGAGACTAAATTAAGAAAAGCAAGGTATGTTACGGACAGAAGAAGACAAAAAGTTGTCTCCCTAATAGACACAACAAATCAGAGGACTAAGTTACACGCAATTCATCTAGCTTTGCAGGATTCAGGATCAACAGTAAACATAGTGACAGACTCACAATATGCCTTAAAGATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGCTAATAAAAAAAGAAAAAATTTACCTGGCATAAGTCCCAGCACACAAAAGAATTAGAAGAAATGAACAAGTAGATAAATTAGTCAGTAGTAGAATCAGAAAAGTACTATTTCTAGATAGAATAGATAAAGCCCAAGAAGAACATGAAAAATATCACAGTAATTAAAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAAGAGAACCTATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAAGAAAAATTATCCTAGTAGCAGTTCATGTAGCCAGTAGATACATAGAAGCAGAAGTTATTGCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTGGCAGGAAGATGGCCAGTAAAAATAATACATACAGACAATGGCAGCAATTTCACCAGCACTACAGTTAAGGCCGCCTGTTAGTAGGCAAGGATCAAGCAGAAATTTAGTATTCCCTACAATCCTCAAAGTCAAGGAGTAGTAGAATCTATGAATAATGAATTAAAGAAAATTATAGGACAGGTAAAAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAAGGGGGATTGGGGGGTACAGTGCAGAGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTTCAAAAATTCAAAATTTTCAGGTTTATTACAGGGACAGCAGAGAACCACTTTGGAAAGGACCAGCAAAGCTCCTCTAGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGATATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCCTTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAAGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATGAGTTTACAGACATCACCATGA"
@@ -3609,7 +3609,7 @@
             "orientation": "forward",
             "start": 4445,
             "end": 5024,
-            "distance": 1.9072538860103636,
+            "distance": 1.8546875000000016,
             "protein": "MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR",
             "aminoacids": "MENRWQVMIVWQVDKMRIRTWNSLVKHHMHISKKAQR*VYRHHHESHNPKTSSEVHIPLREARLVIKTY*GLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHRVRPRCEYQAGHNKVGSLQYLALTALITPKRRKPPLPSVTKLTEDRWNKSQRTKGHKRSHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAAGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATGCATATTTCAAAGAAAGCTCAGAGATGAGTTTACAGACATCACCATGAAAGCCATAATCCAAAAACAAGTTCAGAAGTACACATCCCATTAAGGGAAGCAAGATTAGTAATAAAAACATATTAAGGTCTGCATACAGGAGAAAGAGACTGGCATTTAGGCCAGGGAGTATCCATAGAATGGAGGAAAAAGAGATATAGCACACAAGTAGACCCTGGCCTGGCAGACCAACTAATTCACCTGTATTATTTTGATTGTTTTTCAGAATCTGCTATAAGGAATGCCATATTAGGACATAGAGTTAGGCCTAGGTGTGAATATCAGGCAGGACATAACAAGGTAGGATCCCTACAATACTTGGCATTAACAGCATTAATAACACCAAAAAGGAGAAAGCCACCTTTGCCCAGTGTTACAAAATTAACAGAGGACAGATGGAACAAGTCCCAGAGGACCAAAGGCCACAAAAGGAGCCATACAATGAATGGACATTAG"
@@ -3618,18 +3618,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 4963,
-            "end": 5254,
-            "distance": 0.48958333333333326,
+            "end": 5257,
+            "distance": 0.5961538461538467,
             "protein": "MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS",
-            "aminoacids": "MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS*",
-            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAAGGCCACAAAAGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAACTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGAGGTAGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTAGGTGTCAACATAGCAGGATAAGAATTATTCGACAGAGGAGAGCAAGAAATAGAGCCAGTAGATCCTAA"
+            "aminoacids": "MEQVPEDQRPQKEPYNEWTLELLEELKSEAVRHFPRPWLHSLGQYIYETYGDTWAEVEAIIRTLQQLLFIHFRIRCQHSRIRIIRQRRARNRASRS*L",
+            "nucleotides": "ATGGAACAAGTCCCAGAGGACCAAAGGCCACAAAAGGAGCCATACAATGAATGGACATTAGAGCTCTTAGAAGAACTTAAGAGTGAAGCTGTTAGGCATTTTCCTAGACCATGGCTTCATAGCTTAGGACAATATATCTATGAAACTTATGGAGATACTTGGGCAGAGGTAGAAGCCATAATAAGAACCCTGCAACAACTGTTGTTCATTCATTTCAGAATTAGGTGTCAACATAGCAGGATAAGAATTATTCGACAGAGGAGAGCAAGAAATAGAGCCAGTAGATCCTAACTT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5288,
             "end": 5453,
-            "distance": 1.1791666666666667,
+            "distance": 1.1236111111111113,
             "protein": "MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ",
             "aminoacids": "MTACNNCYCKRCCFHCQVCFTRKGLGISHGRKKRRQRRRASHSSQNHQAALPEQ*",
             "nucleotides": "ATGACTGCTTGTAACAATTGCTATTGTAAACGGTGTTGCTTTCATTGCCAAGTTTGCTTCACAAGAAAAGGCTTAGGCATCTCCCATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGTAA"
@@ -3639,7 +3639,7 @@
             "orientation": "forward",
             "start": 5373,
             "end": 5451,
-            "distance": 0.5769230769230769,
+            "distance": 0.6538461538461537,
             "protein": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "aminoacids": "MAGRSGDSDEELLTAVRIIKRLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCACAGCAGTCAGAATCATCAAGCGGCTCTACCAGAGCAGT"
@@ -3649,8 +3649,8 @@
             "orientation": "forward",
             "start": 5465,
             "end": 5711,
-            "distance": 1.8469135802469132,
-            "protein": "MHALEIAAIVRLVVAAIIAIVV",
+            "distance": 1.3548780487804881,
+            "protein": "SIVLIEYKKILRQKKIDRLIDRIRERAEDSGNESDEDQEELSAIVEIGHLVP",
             "aminoacids": "MHALEIAAIVRLVVAAIIAIVV*SIVLIEYKKILRQKKIDRLIDRIRERAEDSGNESDEDQEELSAIVEIGHLVP*DSDDM*",
             "nucleotides": "ATGCATGCCTTAGAAATAGCAGCAATAGTAAGATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTAGTCTATAGTATTAATAGAATATAAGAAAATTTTAAGACAAAAGAAAATAGACAGGTTAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAAAGTGACGAGGACCAGGAAGAATTATCAGCAATTGTAGAGATAGGGCATCTTGTTCCTTAGGATAGTGATGATATGTAG"
         },
@@ -3659,7 +3659,7 @@
             "orientation": "forward",
             "start": 5628,
             "end": 8229,
-            "distance": 1.8793946449359673,
+            "distance": 1.8721962616822374,
             "protein": "MTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD",
             "aminoacids": "MKVTRTRKNYQQL*R*GILFLRIVMICSANNL*VTVYYEVPVWKEATTTLFCASDAKAYKTEKHNVWATHACVPTDPSPQEVALENVTETFNMWKNDMVEQMHEDIISL*DQSLKPCVKLTPLCVTLNCTDELNLNCPNNNTCSNNTKYNMTEEGEIKNCSFNVTTGIRDKVTKEHALFYKLDVVPIDESSGNTTGKYRMINCNTSVITQACPKVSFEPIPIHFCAPASFAILKCKDKKFNRTGECRNVSTVQCTHRIRPVVSTQLLLNGSLAEEEIVIRSANLSNNAKTIIVQLNKSVKINCTRPNNNTRRSIHIGPRRAFYRTDIIGDIRQAHCNISRKD*NDTLKQIVIKLKEKFKNKTIVFNQSSGKDPEIVMHSFNCREEFFYCNTTQLFNST*NNNT*NGTDN*NSTESNSTITLPCRIKQIINLWQEVRRAMYAPPIQGQIRCSSNITGLLLVRDSKSNNSSNDTKTFRPRRGDMKDN*RSELYKYKVVKIEPLRIAPTHAKRRVVQKEKRAIGLRAFFLKFLGAAGSTIGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTV*GIKQLQARVLALERYLKDQQLLKI*GCSRKLICTTNVP*NVS*SPR*NRSLDKI*TNMT*KQ*EKEIDNYTDTIYNLIEQSQNQQEQNEQDLLALDK*ASL*N*FDITQWL*YIKIFIMIVRGLISLRIVFTILSIVNRVRQRYSPLSLQTLLPTQRGPDRPERTEEGGREKDRGTSTRLVHRFLALI*DDLRSLFLFSYHRLRDLLLIVARIVELLRRRK*EALKYW*NLLQY*SQEIKNSAVSLLNTTAIAVAERTDKIIEVLQRGFRAILHIPTRIRQGLEKALL*",
             "nucleotides": "ATGAAAGTGACGAGGACCAGGAAGAATTATCAGCAATTGTAGAGATAGGGCATCTTGTTCCTTAGGATAGTGATGATATGTAGTGCCAACAACTTGTAGGTCACAGTCTATTATGAGGTACCTGTATGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATAAGACAGAGAAGCATAATGTTTGGGCAACCCATGCCTGTGTACCCACAGACCCCAGCCCACAGGAAGTAGCATTAGAAAATGTGACAGAAACATTTAACATGTGGAAAAATGACATGGTAGAGCAGATGCATGAGGATATAATCAGTTTATAAGATCAAAGCCTAAAGCCATGTGTGAAACTAACCCCACTCTGTGTTACTTTAAATTGCACTGATGAATTAAATCTAAATTGCCCTAACAATAATACTTGTAGTAATAATACTAAATATAATATGACGGAAGAAGGAGAAATAAAAAACTGCTCTTTCAATGTCACCACAGGAATAAGAGATAAGGTGACAAAAGAACATGCACTTTTCTATAAACTTGATGTAGTACCAATAGATGAAAGTAGTGGAAATACTACAGGCAAATATAGGATGATAAATTGTAACACCTCAGTCATTACACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTTTTGTGCCCCGGCTAGTTTTGCGATTCTAAAGTGTAAAGATAAGAAATTCAATAGAACAGGAGAATGTAGAAATGTCAGCACAGTACAATGTACACATAGAATTAGGCCAGTAGTATCAACTCAACTGCTGCTGAACGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGCCAATCTCTCGAACAATGCTAAAACCATAATAGTACAGCTGAATAAATCTGTAAAAATTAATTGTACAAGACCCAACAATAATACAAGAAGAAGTATACACATAGGACCAAGGAGGGCATTTTATAGAACAGACATAATAGGAGATATAAGACAAGCGCATTGTAACATTAGTAGGAAAGATTAGAATGACACTTTAAAACAGATAGTTATAAAATTAAAAGAAAAATTTAAGAATAAAACAATAGTCTTTAATCAATCCTCAGGAAAGGACCCAGAGATAGTGATGCATAGTTTTAATTGTAGAGAAGAATTTTTCTACTGTAATACAACACAGCTGTTTAATAGTACTTAGAATAATAATACTTAGAATGGTACTGATAATTAGAATAGTACTGAATCAAATAGCACTATCACACTCCCATGCAGAATAAAACAAATTATAAACTTGTGGCAGGAAGTAAGAAGAGCAATGTATGCCCCTCCCATCCAAGGGCAAATTAGATGTTCATCAAATATTACAGGGCTGCTGCTAGTAAGAGATAGTAAGAGCAACAATAGTAGTAATGATACAAAGACCTTCAGGCCTAGAAGAGGAGATATGAAGGACAATTAGAGAAGTGAATTATATAAATATAAAGTAGTCAAAATTGAACCATTAAGAATAGCACCCACCCATGCAAAGAGAAGAGTGGTGCAGAAAGAAAAAAGAGCAATAGGACTTAGAGCTTTCTTCCTTAAGTTCTTAGGAGCAGCAGGAAGCACTATAGGCGCAGCGTCAGTGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAAAACAATTTGCTGAGAGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTAAGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTTTAGAAAGATACCTAAAAGATCAACAGCTCCTGAAGATTTGAGGTTGCTCTAGAAAACTCATTTGCACCACTAATGTGCCCTAAAATGTTAGTTAGAGCCCTAGATAGAATAGATCTCTAGATAAGATTTAGACTAACATGACCTAGAAGCAGTAGGAAAAAGAAATTGACAATTATACAGACACAATATATAACTTAATTGAACAATCACAGAACCAACAAGAACAGAATGAACAAGACTTATTAGCATTAGATAAGTAGGCAAGTTTGTAGAATTAGTTTGACATTACACAGTGGCTATAGTATATAAAAATATTCATAATGATAGTAAGAGGCTTGATAAGTTTAAGAATAGTTTTTACTATACTGTCTATAGTGAATAGAGTTAGGCAGAGATACTCACCATTGTCATTGCAGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAAGAACAGAAGAAGGAGGTAGAGAGAAAGACAGAGGCACATCCACGAGATTAGTGCATAGATTCTTAGCACTCATCTAGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGTGGCGAGGATTGTAGAACTTCTAAGACGCAGAAAGTAAGAAGCACTGAAGTATTGGTAGAATCTCCTGCAGTATTAGAGTCAGGAAATAAAGAATAGTGCAGTTAGCTTGCTCAACACCACAGCAATAGCAGTAGCTGAAAGGACAGATAAGATTATAGAAGTATTACAAAGAGGCTTTAGAGCTATTCTCCACATACCTACACGAATAAGACAGGGCTTAGAAAAAGCTTTGCTATAA"
@@ -3668,31 +3668,31 @@
             "name": "tat_exon2",
             "orientation": "forward",
             "start": 7810,
-            "end": 7906,
-            "distance": 0.9838709677419355,
+            "end": 7903,
+            "distance": 0.4866666666666659,
             "protein": "RPSSQPRGDPTGPKEQKKEVERKTEAHPRD",
-            "aminoacids": "RPSSQPRGDPTGPKEQKKEVERKTEAHPRD*C",
-            "nucleotides": "AGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAAGAACAGAAGAAGGAGGTAGAGAGAAAGACAGAGGCACATCCACGAGATTAGTGC"
+            "aminoacids": "RPSSQPRGDPTGPKEQKKEVERKTEAHPRD*",
+            "nucleotides": "AGACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAAGAACAGAAGAAGGAGGTAGAGAGAAAGACAGAGGCACATCCACGAGATTAG"
         },
         {
             "name": "rev_exon2",
             "orientation": "forward",
             "start": 7811,
-            "end": 8090,
-            "distance": 1.3989130434782608,
+            "end": 8087,
+            "distance": 1.2406593406593407,
             "protein": "ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE",
-            "aminoacids": "DPPPNPEGTRQARKNRRRR*RERQRHIHEISA*ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE*C",
-            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAAGAACAGAAGAAGGAGGTAGAGAGAAAGACAGAGGCACATCCACGAGATTAGTGCATAGATTCTTAGCACTCATCTAGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGTGGCGAGGATTGTAGAACTTCTAAGACGCAGAAAGTAAGAAGCACTGAAGTATTGGTAGAATCTCCTGCAGTATTAGAGTCAGGAAATAAAGAATAGTGC"
+            "aminoacids": "DPPPNPEGTRQARKNRRRR*RERQRHIHEISA*ILSTHLGRPAEPVPLQLPPLERLTLDCGEDCRTSKTQKVRSTEVLVESPAVLESGNKE*",
+            "nucleotides": "GACCCTCCTCCCAACCCAGAGGGGACCCGACAGGCCCGAAAGAACAGAAGAAGGAGGTAGAGAGAAAGACAGAGGCACATCCACGAGATTAGTGCATAGATTCTTAGCACTCATCTAGGACGACCTGCGGAGCCTGTTCCTCTTCAGTTACCACCGCTTGAGAGACTTACTCTTGATTGTGGCGAGGATTGTAGAACTTCTAAGACGCAGAAAGTAAGAAGCACTGAAGTATTGGTAGAATCTCCTGCAGTATTAGAGTCAGGAAATAAAGAATAG"
         },
         {
             "name": "nef",
             "orientation": "forward",
             "start": 8287,
-            "end": 8872,
-            "distance": 0.9300000000000002,
+            "end": 8878,
+            "distance": 0.9788617886178801,
             "protein": "MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC",
-            "aminoacids": "MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*",
-            "nucleotides": "ATGAGACAAGCTAGGCCAGTAAGAAAGCCAGAGCCAGCAGCAACTAAGGTAAGAGCAGCATCTCGAGACCTAGAAAGACATGGAGCACTTACAAGTAGCAATACAGCAGCTACCAATGCTGATGTTGCCTGCCTAGAAGCACAACAGGAAGAAAAAGAGGTAGGTTTTCCAGTCAGACCTCAGGTACCTTTAAGGCCAATGACTTACAAAGGAGCTCTAGATATTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGATGGGCTAATTTACTCCAAAAGAAGACAAGACATCCTTGATCTGTGGCTCTACAACACACAAGGCTACTTCCCTGACTGGCAGAACTACACACCAAGGCCAGGAGTCAGATTTCCACTGTGTTTTAGATGGTGCTTCAAGCTAGTACCAGTTGATCCAGATAAGGTAGAAGAGGCCAGTGTAGGAGAGAACAACTGCTTGTTAAGCCCCGAAAACCTGCATAGAATAGAAGACGAACACAGAGAAGTATTGCAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTATTACAAGGACTGCTGA"
+            "aminoacids": "MRQARPVRKPEPAATKVRAASRDLERHGALTSSNTAATNADVACLEAQQEEKEVGFPVRPQVPLRPMTYKGALDISHFLKEKGGLDGLIYSKRRQDILDLWLYNTQGYFPDWQNYTPRPGVRFPLCFRWCFKLVPVDPDKVEEASVGENNCLLSPENLHRIEDEHREVLQWRFDSRLAFHHVARELHPEYYKDC*H*",
+            "nucleotides": "ATGAGACAAGCTAGGCCAGTAAGAAAGCCAGAGCCAGCAGCAACTAAGGTAAGAGCAGCATCTCGAGACCTAGAAAGACATGGAGCACTTACAAGTAGCAATACAGCAGCTACCAATGCTGATGTTGCCTGCCTAGAAGCACAACAGGAAGAAAAAGAGGTAGGTTTTCCAGTCAGACCTCAGGTACCTTTAAGGCCAATGACTTACAAAGGAGCTCTAGATATTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGATGGGCTAATTTACTCCAAAAGAAGACAAGACATCCTTGATCTGTGGCTCTACAACACACAAGGCTACTTCCCTGACTGGCAGAACTACACACCAAGGCCAGGAGTCAGATTTCCACTGTGTTTTAGATGGTGCTTCAAGCTAGTACCAGTTGATCCAGATAAGGTAGAAGAGGCCAGTGTAGGAGAGAACAACTGCTTGTTAAGCCCCGAAAACCTGCATAGAATAGAAGACGAACACAGAGAAGTATTGCAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTATTACAAGGACTGCTGACACTAA"
         }
     ],
     "MK115490.1": [
@@ -4036,18 +4036,18 @@
             "name": "gag",
             "orientation": "forward",
             "start": 801,
-            "end": 2319,
-            "distance": 0.3058823529411774,
+            "end": 2313,
+            "distance": 0.20240000000000014,
             "protein": "MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ*R*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGATGGGAAAGAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAGCGGTTCGCAGTTAATCCTGGCCTGTTAGAAACATCAAAAGGCTGTAGACAAATATTGGAACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATAGATGTAAAAGACACCAAGGAAGCTTTAGATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAACACAGCAAGCAGCAGCTGACACAGGAAACAACAGCCAGACCAGCCAGGCCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGACTAAATAAAATAGTAAGGATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAATCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAATTGGATGACAGAAACATTATTGGTCCAAAATGCAAACCCAGATTGCAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCTGGCCATAAAGCAAGAGTTTTGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTACCATAATGATGCAGAGAGGCAATTTCAGGAACCAGAGAAAGAATGTTAAGTGTTTCAACTGTGGCAAAGAAGGGCATATAGCTAAAAATTGCAGGGCCCCTAGAAAAAGGGGCTGTTGGAAATGTGGAAAAGAAGGACACCAAATGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGGTAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAG"
+            "aminoacids": "MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKTQQAAADTGNNSQTSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNFRNQRKNVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPVDKELYPLASLRSLFGNDPSSQ*",
+            "nucleotides": "ATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGATGGGAAAGAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAGCGGTTCGCAGTTAATCCTGGCCTGTTAGAAACATCAAAAGGCTGTAGACAAATATTGGAACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATAGATGTAAAAGACACCAAGGAAGCTTTAGATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAACACAGCAAGCAGCAGCTGACACAGGAAACAACAGCCAGACCAGCCAGGCCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGACTAAATAAAATAGTAAGGATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAATCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAATTGGATGACAGAAACATTATTGGTCCAAAATGCAAACCCAGATTGCAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCTGGCCATAAAGCAAGAGTTTTGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTACCATAATGATGCAGAGAGGCAATTTCAGGAACCAGAGAAAGAATGTTAAGTGTTTCAACTGTGGCAAAGAAGGGCATATAGCTAAAAATTGCAGGGCCCCTAGAAAAAGGGGCTGTTGGAAATGTGGAAAAGAAGGACACCAAATGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGGTAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 2105,
             "end": 5117,
-            "distance": 0.17403751233958542,
+            "distance": 0.10767696909272173,
             "protein": "FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
             "aminoacids": "FFRENLAFPQGEAREFSSEQTRANSPTRRELQVWGGDNNSLSEAGAGRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVTTIHTDNGSNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAAATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGGTAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATGACTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTTGTAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTAACTCAAATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATCTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAGTCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGATGAATTAAGACAACATCTGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGATATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGTTGCCAGAAAAGGACAGTTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAGGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAGCTAGAGCTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCAACAAAAGACTTAATAGCAGAGTTACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAATGAGAGGTGCCCACACTAATGATGTAAAGCAACTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAGTTTAAACTACCCATACAAAGAGAAACATGGGACACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAATTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAGAAAGAACCTATAGTAGGAGCAGAAACTTTCTATGTAGATGGTGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGATATGTTACTAACAGAGGAAGACAAAAAGTTGTCTCCCTAACTGATACAACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTTAATCAAATAATAGAACAGTTAATAAAAAAGGACAAGGTATACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGATGACCATGAGAAATATCACAGTAATTGGAGGGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGCCAGTTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACACTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGGTATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGATGGCCAGTAACAACAATACATACAGACAATGGCAGCAATTTCATCAGTACTACAGTTAAGGCCGCCTGCTGGTGGGCGGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATCATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATACATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
@@ -4056,18 +4056,18 @@
             "name": "vif",
             "orientation": "forward",
             "start": 5061,
-            "end": 5649,
-            "distance": 0.33854166666666674,
+            "end": 5640,
+            "distance": 0.296875,
             "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*SF*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGGACATGGAAAAGTTTAGTAAAACACCATATGTATATTTCAAGGAAAGCTAAGGGATGGGTTTATAAGCATCACTATGACAGTATTCATCCAAGAATAAGTTCAGAAGTTCACATCCCACTAGGGGATGCGAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGAAAGGAGAGATATAGCACACAAGTAGACCCTGGCCTAGCAGACCAACTAATTCATCGGTATTACTTTGATTGTTTTTCAGAATCTGCCATAAGAAATGCCATATTAGGACGTATAGTTAGTCCTAGTTGTGATTATCAAGCAGGACATAACAAGGTAGGATCTCTACAGTACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAG"
+            "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSIHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKERYSTQVDPGLADQLIHRYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*",
+            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGGACATGGAAAAGTTTAGTAAAACACCATATGTATATTTCAAGGAAAGCTAAGGGATGGGTTTATAAGCATCACTATGACAGTATTCATCCAAGAATAAGTTCAGAAGTTCACATCCCACTAGGGGATGCGAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGAAAGGAGAGATATAGCACACAAGTAGACCCTGGCCTAGCAGACCAACTAATTCATCGGTATTACTTTGATTGTTTTTCAGAATCTGCCATAAGAAATGCCATATTAGGACGTATAGTTAGTCCTAGTTGTGATTATCAAGCAGGACATAACAAGGTAGGATCTCTACAGTACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAG"
         },
         {
             "name": "vpr",
             "orientation": "forward",
             "start": 5579,
             "end": 5870,
-            "distance": 0.35416666666666674,
+            "distance": 0.30208333333333326,
             "protein": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS",
             "aminoacids": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAITRILQQLLFIHFRIGCQHSRIGIIQRRRARNGTSRS*",
             "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACACTTCCCTAGGCCATGGCTCCACAGCTTAGGGCAACATATCTATGAAACATATGGAGATACTTGGGCAGGAGTGGAAGCCATAACAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATCATTCAACGGAGGAGAGCAAGAAATGGAACCAGTAGATCCTAG"
@@ -4077,7 +4077,7 @@
             "orientation": "forward",
             "start": 5850,
             "end": 6066,
-            "distance": 0.4027777777777777,
+            "distance": 0.38888888888888884,
             "protein": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ",
             "aminoacids": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ",
             "nucleotides": "ATGGAACCAGTAGATCCTAGATTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAGGACTGCTTGTACCTCTTGTTATTGTAAGCAGTGTTGCTTTCATTGCCAAGTTTGTTTCATAACAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCATCAAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAG"
@@ -4087,7 +4087,7 @@
             "orientation": "forward",
             "start": 5989,
             "end": 6067,
-            "distance": 0.46153846153846145,
+            "distance": 0.34615384615384626,
             "protein": "MAGRSGDSDEELIKTVRLIKLLYQSS",
             "aminoacids": "MAGRSGDSDEELIKTVRLIKLLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCATCAAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAGT"
@@ -4097,7 +4097,7 @@
             "orientation": "forward",
             "start": 6081,
             "end": 6330,
-            "distance": 0.35185185185185186,
+            "distance": 0.44999999999999996,
             "protein": "MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL",
             "aminoacids": "MQPLEISAIVALVVAIIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*",
             "nucleotides": "ATGCAACCTTTAGAAATATCAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGTGTGGTCCATAGTACTCATAGAATATAGGAAAATATTAAGACAAAGAAAAATAGACAGGATAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGCGAGGGGGATCAGGAAGAATTATCAGCACTTGTTGTGGAGATGGGGCACGATGCTCCTTGGGATGTTAATGATCTGTAG"
@@ -4107,7 +4107,7 @@
             "orientation": "forward",
             "start": 6244,
             "end": 8827,
-            "distance": 0.509590643274854,
+            "distance": 0.44534746760895216,
             "protein": "MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL",
             "aminoacids": "MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFYASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNTTSTKNTTPSTTASSGERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTIQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVHLKDSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSSWKDESNGTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLITRDGGKNNESNTTEIFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLEQIWDNMTWMQWEREIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHPPAPRGPDRPEGIGEEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLNIPRRIRQGLERALL*",
             "nucleotides": "ATGAGAGCGAGGGGGATCAGGAAGAATTATCAGCACTTGTTGTGGAGATGGGGCACGATGCTCCTTGGGATGTTAATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACTACCACTCTATTTTATGCATCAGATGCTAAAGCATATGGTACAGAGGTACATAATGTTTGGGCTACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGGAAATGTGACAGAGAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTGAATTGCACTAATTATAATAACACCAATACCACTAGTACCAAGAATACCACCCCTAGTACCACTGCTAGTAGCGGGGAAAGGATGGGGGAAGGAGAAATAAAAAACTGCTCTTTCAATATCACCACAAGCCTAAGAGATAAGATGCAGAAAGAATATGCACTCTTTTATAGACCTGATATAGTACCAATAGATAATGATAATACTAGTTATAGGTTGATAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCAGCTGGTTTTGCGATTCTAAAGTGTAACAATAAGAAGTTCAATGGATCAGGACCATGTACAAATGTCAGCACAATACAATGTACACATGGAATTAGGCCAGTAGTGTCAACTCAACTACTGTTAAATGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGAAAATTTCTCAGACAATGCTAAAACCATAATAGTACATCTGAAGGATTCTGTAGAAATTACTTGTATAAGACCCAACAACAATACAAGAAAAAGTATACCTATGGGACCAGGGAAAGCATTTTTTGCAACAGGAGCCATAATAGGAGATATAAGACAAGCACATTGTAAAATTAATAAAACGAAATGGAATAACACTTTAGACCAGATATTTAAAAAGTTAAGAGAACAATTTGGGAATAATAAGACAATAATCTTTAATCACTCCTCAGGAGGGGACCCAGAAATTGTAACGCACAATTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACATCAAAACTGTTTAATAGTACTTGGAATGAGACTAGTTCTTGGAAGGATGAGTCAAATGGCACTATCACACTCCCATGCAGAATAAAGCAAATTATAAACCTGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATTAGAGGACTCATTAAATGTTCATCAAATATCACAGGGCTGCTAATAACAAGAGATGGTGGGAAAAATAATGAGAGCAACACCACCGAGATTTTCAGACCTGAAGGAGGAAATATGAAGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAATAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATAACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGAATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAAACTCTGGAACAGATTTGGGATAACATGACCTGGATGCAATGGGAAAGAGAAATTGACAATTACACAAGCTTGATATACACTTTAATTGAAGAATCGCAAAACCAACAAGAAAAGAATGAACTAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTGCTTTCTATAGCGAATAGAGTTAGGCAGGGATACTCACCATTATCGTTTCAGACCCACCCCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCGGGGGGTGGGAACTCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCTATTAGCTTGCTTAATGCTACAGCCATAGCAGTAGCTGAGGGGACAGACAGGATTATAGAAGTATTACAAAGAGCTGGGAGAGCTTTTCTCAACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGGCTTTGCTATAA"
@@ -4117,7 +4117,7 @@
             "orientation": "forward",
             "start": 8408,
             "end": 8504,
-            "distance": 0.5,
+            "distance": 0.6000000000000001,
             "protein": "RPTPQPRGDPTGQKESEKKVERETETDPDH",
             "aminoacids": "RPTPQPRGDPTGQKESEKKVERETETDPDH**",
             "nucleotides": "AGACCCACCCCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGA"
@@ -4127,7 +4127,7 @@
             "orientation": "forward",
             "start": 8409,
             "end": 8685,
-            "distance": 0.39560439560439553,
+            "distance": 0.3296703296703296,
             "protein": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE",
             "aminoacids": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*",
             "nucleotides": "GACCCACCCCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGGAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCGGGGGGTGGGAACTCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAG"
@@ -4137,458 +4137,10 @@
             "orientation": "forward",
             "start": 8828,
             "end": 9461,
-            "distance": 0.38627450980392153,
+            "distance": 0.29182692307692304,
             "protein": "MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC",
             "aminoacids": "MGGKWSKSSVVGWPAIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*",
             "nucleotides": "ATGGGTGGTAAGTGGTCAAAAAGTAGTGTGGTTGGATGGCCTGCTATAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGAGCCAGCAGCAGATGGGGTGGGAGCAGCATCTAGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGATTGTGCCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTCAGGCCTCAGGTACCTTTAAGACCAATGACTTATAAGGCAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGTTAATTTACTCCCAGAAAAGACAAGATATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATAAGATATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTGCCAGTTGAGCCAGATAAGGTAGAAGAGGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGATGACCCAGAGAAAGAAGTGTTAGTATGGAGATTTGACAGTCGCCTGGCATTTCATCACATGGCCCGAGAGCTGCATCCGGAGTACTACAAGGATTGCTGA"
         }
-    ],
-    "OQ092465": [
-        {
-            "name": "gag",
-            "orientation": "forward",
-            "start": 855,
-            "end": 2358,
-            "distance": 0.2968627450980399,
-            "protein": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQQIDVKDTKEALDKIEEEQNKSKKKVQQAATDTGNNSQASQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKESFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGAIMMQRGNFRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGGTGGGAAAAAATTCGGTTAAGGCCAGGAGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAACTAGAACGGTTTGCAGTTAATCCTGGCCTGTTAGAAACATCAAAAGGCTGTAGACAAATATTGGAACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAACAGATAGATGTAAAAGACACCAAGGAAGCTTTAGATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAGGTACAGCAAGCAGCAACTGACACAGGAAACAACAGCCAGGCCAGCCAAAATTACCCTATAGTGCAGAATCTCCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGACTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGGATGTATAGTCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAATCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAATTGGATGACAGAAACATTATTGGTCCAAAATGCAAACCCAGACTGCAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCTGGCCATAAAGCAAGAGTTTTGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTGCCATAATGATGCAGAGAGGCAATTTCAGGAGCCAAAGAAAGACTGTTAAGTGTTTCAACTGTGGCAAAGAAGGGCATATAGCTAAAAATTGCAGGGCCCCTAGAAAAAGGGGCTGTTGGAAATGTGGAAAAGAAGGACACCAAATGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGCAGAGAGCTTCAGGTTCGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
-        },
-        {
-            "name": "pol",
-            "orientation": "forward",
-            "start": 2150,
-            "end": 5162,
-            "distance": 0.17956564659427454,
-            "protein": "FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFREDLAFPQGEAREFSSEQTRANSPTSRELQVRGGDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIDELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLKGTKALTEVVPLTREAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQRETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
-            "nucleotides": "TTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGCAGAGAGCTTCAGGTTCGGGGAGGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAGAAGACATGACTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTTGTAGAAATCTGTGGACATAAAGCTATAGGTACAGTTTTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAAATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATCTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGATGAATTAAGACAACATCTGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGGTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGTTGCCAGAAAAAGACAGTTGGACTGTTAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAGGTAAAGCAATTATGTAGACTCCTTAAGGGAACCAAGGCACTAACAGAAGTAGTACCACTAACAAGAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCAACAAAAGACTTAATAGCAGAGTTACAGAAGCAGGGACAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGAGGTGCCCACACTAATGATGTAAAACAGCTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAGTTTAAACTACCCATACAAAGAGAAACATGGGACACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTTTATGTAGATGGTGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGATATGTTACTAATAGAGGAAGACAAAAAGTTGTCTCCCTAACTGACACCACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATCCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTTAATCAAATAATAGAACAGTTAATAAAAAAGGACAAAGTATACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGATGATCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGCCAGTTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTGGATTGTACACACTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGTGGCAATTTCATCAGTACTACAGTTAAGGCCGCCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGCATACCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATCATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATACATACACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
-        },
-        {
-            "name": "vif",
-            "orientation": "forward",
-            "start": 5106,
-            "end": 5694,
-            "distance": 0.38541666666666674,
-            "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISKKAKGWIYKHHYDSINPKISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADRLIHLYYFDCFSESAIRNAILGRIVSPSCDYQAGHNKVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*SF*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGGACATGGAAAAGTTTAGTAAAACACCATATGTATATTTCAAAGAAAGCTAAGGGATGGATTTATAAGCATCACTATGACAGTATTAATCCAAAAATAAGTTCAGAAGTTCACATCCCACTAGGGGATGCAAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGGCCTAGCAGACCGACTAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGCCATATTAGGACGTATAGTTAGTCCTAGTTGTGATTATCAAGCAGGACATAACAAGGTAGGGTCTCTACAGTACTTGGCACTAACAGCACTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAG"
-        },
-        {
-            "name": "vpr",
-            "orientation": "forward",
-            "start": 5624,
-            "end": 5915,
-            "distance": 0.30208333333333326,
-            "protein": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS",
-            "aminoacids": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCQHSRIGILQRRRARNGASRS*",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACACTTTCCTAGGCCATGGCTACACAGCTTAGGGCAACATATCTATGAAACATATGGAGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATCCTTCAACGGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
-        },
-        {
-            "name": "tat_exon1",
-            "orientation": "forward",
-            "start": 5895,
-            "end": 6111,
-            "distance": 0.4027777777777777,
-            "protein": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ",
-            "aminoacids": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAHQDSQTHQASLSKQ",
-            "nucleotides": "ATGGAGCCAGTAGATCCTAGATTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAGGACTGCTTGTACCTCTTGTTATTGTAAGCAGTGTTGCTTTCATTGCCAAGTTTGTTTCATAACAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCATCAAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAG"
-        },
-        {
-            "name": "rev_exon1",
-            "orientation": "forward",
-            "start": 6034,
-            "end": 6112,
-            "distance": 0.46153846153846145,
-            "protein": "MAGRSGDSDEELIKTVRLIKLLYQSS",
-            "aminoacids": "MAGRSGDSDEELIKTVRLIKLLYQSS",
-            "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCATCAAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAGT"
-        },
-        {
-            "name": "vpu",
-            "orientation": "forward",
-            "start": 6126,
-            "end": 6375,
-            "distance": 0.35185185185185186,
-            "protein": "MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL",
-            "aminoacids": "MQPLVISAIVALVVVAIIAIVVWSIVLIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVVEMGHDAPWDVNDL*",
-            "nucleotides": "ATGCAACCTTTAGTAATATCAGCAATAGTAGCATTAGTAGTAGTAGCGATAATAGCAATAGTTGTGTGGTCCATAGTACTCATAGAATATAGGAAAATATTAAGACAAAGAAAAATAGACAGGATAATTGATAGAATAAGGGAAAGAGCAGAAGACAGTGGCAATGAGAGCGAGGGGGATCAGGAAGAATTATCAGCACTTGTTGTGGAGATGGGGCACGATGCTCCTTGGGATGTTAATGATCTGTAG"
-        },
-        {
-            "name": "env",
-            "orientation": "forward",
-            "start": 6289,
-            "end": 8881,
-            "distance": 0.5119298245614039,
-            "protein": "MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL",
-            "aminoacids": "MRARGIRKNYQHLLWRWGTMLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYGTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTGANNTTSTNTTTPSTTVSSEERMGEGEIKNCSFNITTSLRDKMQKEYALFYRPDIVPIDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKNIIVHLNKSVEITCIRPNNNTRKSIPMGPGKAFFATGAIIGDIRQAHCKINKTKWNNTLEQVFKKLREQFGNNKTIIFNHSSGGDPEIVTHNFNCGGEFFYCNTSKLFNSTWNETSYWKGEGSNNDTITLPCRIKQIINLWQEVGKAMYAPPIRGLIKCSSNITGLLLTRDGGNESETTDTETFRPVGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKNLTQIWDNMTWMQWEKEIDNYTSLIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEGEGGERDRDRSGPLVNGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRGGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*",
-            "nucleotides": "ATGAGAGCGAGGGGGATCAGGAAGAATTATCAGCACTTGTTGTGGAGATGGGGCACGATGCTCCTTGGGATGTTAATGATCTGTAGCGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGGTACAGAGGTACATAATGTGTGGGCTACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGGAAATGTGACAGAGAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGTCTAAAACCATGTGTAAAATTAACCCCACTCTGTGTTACTTTGAATTGCACTAATTATAATAACACTGGTGCCAATAATACCACTAGTACCAATACTACCACCCCTAGTACCACTGTTAGTAGCGAGGAAAGGATGGGGGAAGGAGAAATAAAAAACTGCTCTTTCAATATCACCACAAGCCTAAGAGATAAGATGCAGAAAGAATATGCACTCTTTTATAGACCTGATATAGTACCAATAGATAATACTAGTTATAGGTTGATAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTAACCTTTGAGCCAATTCCCATACATTATTGTGCCCCAGCTGGTTTTGCGATTCTAAAGTGTAACAATAAGACGTTCAATGGATCAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTGTCAACTCAACTACTGTTAAATGGCAGTCTAGCAGAAGAAGAGATAGTAATTAGATCTGAAAATTTCTCAGACAATGCTAAAAACATAATAGTACATCTGAATAAATCTGTAGAAATTACTTGTATAAGACCCAACAACAATACAAGAAAAAGTATACCTATGGGACCAGGGAAAGCATTTTTTGCAACAGGAGCCATAATAGGAGATATAAGACAAGCACATTGTAAAATTAATAAAACGAAATGGAATAACACTTTAGAGCAGGTATTTAAAAAGTTAAGAGAACAATTTGGGAATAATAAGACAATAATCTTTAATCACTCCTCAGGAGGGGACCCAGAAATTGTAACGCACAATTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACATCAAAACTGTTTAATAGTACTTGGAATGAGACTAGTTATTGGAAGGGTGAAGGGTCAAACAATGACACTATCACACTCCCATGCAGAATAAAGCAAATTATAAACCTGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGAGGACTCATTAAATGTTCATCAAATATCACAGGGCTACTATTAACAAGAGATGGTGGTAACGAGAGCGAGACCACCGACACTGAGACCTTCAGACCTGTAGGAGGAAATATGAAGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAATAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGATTAGGAGCTATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATAACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGAATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAAAATCTGACACAGATTTGGGATAACATGACCTGGATGCAATGGGAAAAAGAAATTGACAATTACACAAGCTTAATATACACCTTAATTGAAGAATCGCAAAACCAACAAGAAAAGAATGAACTAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTGCTTTCTATAGCGAATAGAGTTAGGCAGGGATACTCACCATTATCGTTTCAGACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGGAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCGGGGGGTGGGAACTCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCTATTAGCTTGCTTAATGCTACAGCCATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTATTACAAAGAGCAGGGAGAGCTTTTCTCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGGCTTTGCTATAA"
-        },
-        {
-            "name": "tat_exon2",
-            "orientation": "forward",
-            "start": 8462,
-            "end": 8558,
-            "distance": 0.3999999999999999,
-            "protein": "RPTSQPRGDPTGQKESKEKVERETETDPDH",
-            "aminoacids": "RPTSQPRGDPTGQKESKEKVERETETDPDH**",
-            "nucleotides": "AGACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGGAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGA"
-        },
-        {
-            "name": "rev_exon2",
-            "orientation": "forward",
-            "start": 8463,
-            "end": 8739,
-            "distance": 0.39560439560439553,
-            "protein": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE",
-            "aminoacids": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILSNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTRGVGTPQVLVESPAVLESGTKE*",
-            "nucleotides": "GACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGGAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAGCAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCGGGGGGTGGGAACTCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAG"
-        },
-        {
-            "name": "nef",
-            "orientation": "forward",
-            "start": 8882,
-            "end": 9515,
-            "distance": 0.4009803921568629,
-            "protein": "MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC",
-            "aminoacids": "MGGKWSKSSVVGWPKIRERMRRAEPAAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*",
-            "nucleotides": "ATGGGTGGCAAGTGGTCAAAAAGTAGTGTGGTTGGATGGCCTAAAATAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGAACCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGATTGTGCCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTCAGGCCTCAGGTACCTTTAAGACCAATGACTTATAAGGCAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTTACTCCCAGAAAAGACAAGATATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGAGGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGATGACCCAGAGAAAGAAGTGTTAGTATGGAGATTTGACAGTCGCCTGGCATTTCATCACATGGCCCGAGAGCTGCATCCGGAGTACTACAAGGACTGCTGA"
-        }
-    ],
-    "OQ092462": [
-        {
-            "name": "gag",
-            "orientation": "forward",
-            "start": 767,
-            "end": 2270,
-            "distance": 0.27679999999999993,
-            "protein": "MGARASVLSGGELDKWEKIRLRPGGKKKYQLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFHTVATLYCVHQKIEVKDTKEALEKIEEEQKKSKKKAQQAAADTGNNSQVSQNYPIVQNMQGQMVHQPLSPRTLNAWVKVIEDKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQLREPRGSDIAGTTSNLQEQIAWMTHNPPVPVGEIYKRWILLGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQVANPASIMMQRGNFRNQRKPIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKVWPSRKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKPEPIDKELYPLASLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDKWEKIRLRPGGKKKYQLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEELKSLFHTVATLYCVHQKIEVKDTKEALEKIEEEQKKSKKKAQQAAADTGNNSQVSQNYPIVQNMQGQMVHQPLSPRTLNAWVKVIEDKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQLREPRGSDIAGTTSNLQEQIAWMTHNPPVPVGEIYKRWILLGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQVANPASIMMQRGNFRNQRKPIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKVWPSRKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKPEPIDKELYPLASLRSLFGNDPSSQ*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGACAAATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATCAGCTAAAACATATAGTATGGGCAAGCAGGGAACTAGAGCGATTTGCAGTTAATCCCGGCCTGTTAGAAACATCGGAGGGCTGTAGACAAATACTAGGGCAACTACAGCCCGCTCTTCAGACAGGATCAGAAGAACTTAAATCACTATTTCATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATAGAGGTGAAAGACACCAAAGAAGCTTTAGAGAAGATAGAGGAAGAGCAAAAGAAAAGTAAGAAAAAGGCACAGCAAGCAGCCGCTGACACAGGAAATAACAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACATGCAGGGACAAATGGTACATCAGCCCCTATCACCTAGAACTTTAAATGCATGGGTAAAAGTAATAGAAGATAAGGCTTTCAGTCCAGAAGTAATACCCATGTTTACAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAATACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGATTACATCCAGTGCAGGCAGGGCCTGTTGCGCCAGGCCAGCTACGAGAGCCAAGGGGAAGTGACATAGCAGGAACTACTAGTAACCTTCAGGAGCAAATAGCATGGATGACACATAATCCACCTGTCCCAGTAGGAGAAATCTATAAAAGATGGATACTTCTGGGATTAAATAAAATAGTAAGAATGTACAGCCCCGTCAGCATTCTGGACATAAAACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCTGAGCAGGCTTCACAGGATGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAGAATGCGAACCCAGATTGTAAGACTATTTTGAAAGCATTAGGACCAGCAGCTACATTAGAAGAAATGATGACAGCATGTCAGGGAGTAGGAGGACCCAGCCATAAAGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAGCAAATCCAGCTAGCATAATGATGCAGAGAGGCAATTTTAGAAACCAAAGAAAGCCTATTAAGTGTTTCAACTGTGGCAAAGAGGGGCATATTGCTAAAAATTGCAGGGCCCCTAGGAAAAGGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGGTCTGGCCTTCCCGCAAGGGGAGGCCAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACGACAACTCCCTCTCAGAAACCGGAGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
-        },
-        {
-            "name": "pol",
-            "orientation": "forward",
-            "start": 2062,
-            "end": 5074,
-            "distance": 0.1495513459621136,
-            "protein": "FFREGLAFPQGEAREFPSEQTRANSPTRRELQVWGRDDNSLSETGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDGNKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPYKNLKTGKYARMRGTHTNDIKQLTEAVQKIATESIVIWGKTPKFKLPIQKETWEAWWIEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLKGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQEVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFREGLAFPQGEAREFPSEQTRANSPTRRELQVWGRDDNSLSETGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDGNKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPYKNLKTGKYARMRGTHTNDIKQLTEAVQKIATESIVIWGKTPKFKLPIQKETWEAWWIEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVPLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLKGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSNVVKAACWWAGIKQEFGIPYNPQSQEVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
-            "nucleotides": "TTTTTTAGGGAAGGTCTGGCCTTCCCGCAAGGGGAGGCCAGGGAATTTCCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACGACAACTCCCTCTCAGAAACCGGAGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGAGGGCAACTAAAGGAAGCTCTATTAGACACAGGAGCAGATGATACAGTTTTAGAAGAAATGAATTTGCCAGGAAAATGGAAGCCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTGTTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAAATTGGCTGCACTTTAAATTTTCCCATTAGCCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAGAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATCTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCCATAAAGAAGAAAGATGGTAATAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTTTGGGAAGTTCAATTAGGAATACCACATCCTGCTGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAGGACTTCAGGAAGTATACTGCATTTACAATACCTAGCACAAACAATGAGACACCAGGGATTAGATACCAGTACAATGTGCTGCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATTTTGGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATTTATCAATACATGGATGATTTATATGTAGGGTCTGACTTAGAAATAGGGCAGCATAGAGCAAAAATAGAGGAACTGAGACAACATCTATTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCCGATAAATGGACAGTACAGCCTATATTGCTGCCAGAAAAAGACAGCTGGACTGTTAATGACATACAGAAGTTAGTGGGAAAATTGAACTGGGCAAGTCAGATTTACCCAGGAATCAAAGTAAGGCAGCTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAGTGGTACCACTAACAGCAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGATTTAATAGCAGAACTACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATATAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAGAGGTACCCACACTAATGATATAAAACAATTAACAGAGGCAGTGCAAAAAATAGCTACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAATTACCCATACAAAAGGAAACATGGGAAGCATGGTGGATAGAGTATTGGCAAGCCACCTGGATTCCTGAATGGGAGTTTGTCAATACCCCTCCCTTAGTGAAACTATGGTACCAGTTGGAAAAAGAACCCATAGTGGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGGGAAACTAAATTAGGAAAAGCAGGATATGTTACTGACAAAGGAAGACAAAAAGTTGTCCCCCTAACGGACACAACAAATCAGAAGACTGAGCTACAAGCAATTCATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAGAGTGAATCAGAACTAGTCAGTCAAATAATAGAGCAGTTAATAAAGAAGGAAAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAGTTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGAAGAACATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGACTTTAACCTGCCACCTATAGTAGCAAAGGAAATAGTAGCCAGTTGTGACAAATGTCAGTTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCTGGAATATGGCAGCTAGATTGTACACATCTAAAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAAGAAACAGCATACTTTCTCTTGAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTAATGTGGTTAAGGCTGCCTGTTGGTGGGCGGGGATCAAACAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGAAGTAATAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCAGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCGTCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACCAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATTATCAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
-        },
-        {
-            "name": "vif",
-            "orientation": "forward",
-            "start": 5018,
-            "end": 5597,
-            "distance": 0.34375,
-            "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMHISRKAKNWLYRHHYESIHPRISSEVHIPLGDARLVITTYWGLLTGERDWHLGQGVSIEWRERRYRTQVDPDLADQLIHLYYFDCFSESAIRNALLGRVVSPRCEYQAGHNQVGSLQYLALTALITPKRRKPPLPSVRKLTEDRWNKPQKTKGHKGSHTMNGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMHISRKAKNWLYRHHYESIHPRISSEVHIPLGDARLVITTYWGLLTGERDWHLGQGVSIEWRERRYRTQVDPDLADQLIHLYYFDCFSESAIRNALLGRVVSPRCEYQAGHNQVGSLQYLALTALITPKRRKPPLPSVRKLTEDRWNKPQKTKGHKGSHTMNGH*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAAGAGTTTAGTAAAACATCATATGCATATATCAAGGAAAGCTAAGAATTGGTTGTATAGACATCACTATGAAAGCATTCATCCAAGAATAAGTTCAGAAGTACACATCCCACTAGGGGATGCTAGATTAGTAATAACAACATATTGGGGTCTGCTTACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGGAAAGGAGATATAGAACACAAGTAGACCCTGACCTAGCAGACCAACTAATTCATCTGTATTATTTTGATTGTTTTTCAGAGTCTGCTATAAGAAATGCCTTATTAGGACGTGTAGTTAGTCCTAGGTGTGAATATCAAGCAGGACATAACCAGGTAGGATCTCTACAGTACTTGGCACTAACAGCATTAATAACACCAAAAAGGAGAAAGCCACCTTTGCCTAGTGTTAGGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGGCACTAG"
-        },
-        {
-            "name": "vpr",
-            "orientation": "forward",
-            "start": 5536,
-            "end": 5830,
-            "distance": 0.32692307692307465,
-            "protein": "MEQAPEDQGPQREPYNEWALELLEELKSEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGINLQRRARNGSSRS",
-            "aminoacids": "MEQAPEDQGPQREPYNEWALELLEELKSEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGINLQRRARNGSSRS*P",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAAAGGGAGCCATACAATGAATGGGCACTAGAACTTTTAGAGGAACTTAAAAGTGAAGCTGTTAGACATTTTCCTAGGATATGGCTTCATGGATTGGGACAGCATATCTATGAAACATATGGGGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGATGTCGACATAGCAGAATAGGCATTAATCTACAGAGGAGAGCAAGGAATGGATCCAGTAGATCCTAGCCT"
-        },
-        {
-            "name": "tat_exon1",
-            "orientation": "forward",
-            "start": 5807,
-            "end": 6026,
-            "distance": 0.41666666666666674,
-            "protein": "MDPVDPSLEPWKHPGSQPKTACTNCYCKKCCFHCQVCFIKKGLGISYGRKKRRQRRRASQGSETHQVSLPKQ",
-            "aminoacids": "MDPVDPSLEPWKHPGSQPKTACTNCYCKKCCFHCQVCFIKKGLGISYGRKKRRQRRRASQGSETHQVSLPKQ*",
-            "nucleotides": "ATGGATCCAGTAGATCCTAGCCTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAGACTGCTTGTACCAATTGTTATTGTAAAAAGTGCTGCTTTCATTGCCAAGTTTGTTTCATAAAAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCAAGGCAGTGAGACTCATCAAGTTTCTCTACCAAAGCAGTAA"
-        },
-        {
-            "name": "rev_exon1",
-            "orientation": "forward",
-            "start": 5946,
-            "end": 6024,
-            "distance": 0.5769230769230769,
-            "protein": "MAGRSGDSDEELLKAVRLIKFLYQSS",
-            "aminoacids": "MAGRSGDSDEELLKAVRLIKFLYQSS",
-            "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTTCTCAAGGCAGTGAGACTCATCAAGTTTCTCTACCAAAGCAGT"
-        },
-        {
-            "name": "vpu",
-            "orientation": "forward",
-            "start": 6038,
-            "end": 6284,
-            "distance": 0.7073170731707319,
-            "protein": "MRPLEIAAIVALVVAVLIAIVVWSIVLIEYRKILRQRKIDRIVDRIRERAEDSGNESEGDQEELSALVERGHLAPWDIDDL",
-            "aminoacids": "MRPLEIAAIVALVVAVLIAIVVWSIVLIEYRKILRQRKIDRIVDRIRERAEDSGNESEGDQEELSALVERGHLAPWDIDDL*",
-            "nucleotides": "ATGCGACCTTTAGAAATAGCAGCAATAGTAGCACTAGTAGTAGCAGTACTAATAGCAATAGTTGTGTGGTCTATAGTACTCATAGAATATAGGAAAATATTAAGACAAAGAAAAATAGACAGGATAGTGGATAGAATAAGAGAAAGAGCAGAAGATAGTGGAAATGAGAGTGAAGGGGATCAGGAGGAATTATCAGCACTGGTGGAGAGGGGGCACCTTGCTCCTTGGGATATTGATGATCTGTAG"
-        },
-        {
-            "name": "env",
-            "orientation": "forward",
-            "start": 6201,
-            "end": 8844,
-            "distance": 0.5698598130841122,
-            "protein": "MRVKGIRRNYQHWWRGGTLLLGILMICSATENLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQEVVLKNVTEKFNMWKNNMVEQMHQDIISLWDESLKPCVKLTPLCVTLNCTNATISGNATEEIKNCSFNVNTKIGGKKQKERALFYKLDVVPIDDDSTNRTNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCGDKEFNGTGLCRNVSTVQCTHGIRPVVSTQLLLNGSLAEGEVVIKSENITNNVKTIIVQLNETVSINCTRPSNNTRRSIHMGPGRAFYATGEIIGDIRKAQCILNKTDWSDTLTRIAKKLHKQFHGPIAFEQSSGGDPEITMHTFNCGGEFFYCNTSALFSGTWNGTAWTNATWGNIAGNNITLQCRIKQFINRWQEVGKAMYAPPIRGEIRCSSNITGLLLTRDGGSNTTNGGENGTQIGENVTQIFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVTFGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKTLEKIWGNMTWMEWEREIDNYTDLIYTLIEQSQNQQEKNEQELLELDKWAGLWNWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTRLPASRGPDRPEGTDEEGGERDRDRSGSLVNGFLALIWIDLRSLFLFSYLRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNAIAISVAEGTDRIIEAIQRICRAILHIPTRIRQGLERALL",
-            "aminoacids": "MRVKGIRRNYQHWWRGGTLLLGILMICSATENLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQEVVLKNVTEKFNMWKNNMVEQMHQDIISLWDESLKPCVKLTPLCVTLNCTNATISGNATEEIKNCSFNVNTKIGGKKQKERALFYKLDVVPIDDDSTNRTNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCGDKEFNGTGLCRNVSTVQCTHGIRPVVSTQLLLNGSLAEGEVVIKSENITNNVKTIIVQLNETVSINCTRPSNNTRRSIHMGPGRAFYATGEIIGDIRKAQCILNKTDWSDTLTRIAKKLHKQFHGPIAFEQSSGGDPEITMHTFNCGGEFFYCNTSALFSGTWNGTAWTNATWGNIAGNNITLQCRIKQFINRWQEVGKAMYAPPIRGEIRCSSNITGLLLTRDGGSNTTNGGENGTQIGENVTQIFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVTFGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKTLEKIWGNMTWMEWEREIDNYTDLIYTLIEQSQNQQEKNEQELLELDKWAGLWNWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTRLPASRGPDRPEGTDEEGGERDRDRSGSLVNGFLALIWIDLRSLFLFSYLRLRDLLLIAARIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNAIAISVAEGTDRIIEAIQRICRAILHIPTRIRQGLERALL*DGWQGVKNEGMGCCKGKNEAN*",
-            "nucleotides": "ATGAGAGTGAAGGGGATCAGGAGGAATTATCAGCACTGGTGGAGAGGGGGCACCTTGCTCCTTGGGATATTGATGATCTGTAGTGCCACAGAGAACTTGTGGGTCACAGTCTACTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTTTATTTTGTGCATCAGATGCCAAAGCATATGATACAGAGGTACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAGCCCACAAGAAGTAGTATTGAAAAATGTGACAGAAAAGTTTAATATGTGGAAAAATAACATGGTAGAACAGATGCATCAGGATATAATCAGTTTATGGGATGAAAGCCTAAAACCATGTGTAAAATTAACCCCACTCTGTGTTACTTTAAATTGCACTAATGCTACTATCAGTGGTAATGCAACAGAAGAAATAAAAAACTGCTCTTTCAATGTCAATACAAAAATAGGAGGTAAGAAGCAGAAAGAACGTGCACTTTTTTATAAACTTGATGTAGTACCAATAGATGATGATAGTACTAATAGGACTAATACCAGCTATAGGTTGATAAGTTGTAACACTTCAGTCATTACACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAGTGTGGAGATAAAGAGTTCAATGGAACAGGACTATGTAGAAATGTCAGCACAGTCCAATGTACACATGGAATCAGGCCAGTAGTATCAACTCAATTGCTGTTGAATGGCAGTCTAGCAGAAGGAGAGGTAGTAATTAAATCTGAAAATATCACGAACAATGTTAAAACCATAATAGTACAGCTAAATGAAACTGTATCAATTAATTGTACAAGACCTAGCAACAATACAAGAAGAAGCATACATATGGGACCAGGGAGAGCCTTTTATGCAACAGGAGAAATAATAGGAGATATAAGGAAAGCACAGTGTATCCTGAATAAGACAGACTGGAGTGACACTTTAACAAGGATAGCTAAAAAATTACACAAGCAATTTCATGGACCAATAGCATTTGAGCAATCCTCAGGAGGGGACCCTGAAATTACAATGCACACTTTTAATTGTGGAGGGGAATTTTTCTACTGCAACACATCAGCGTTGTTTAGCGGGACCTGGAATGGTACTGCTTGGACTAATGCTACTTGGGGTAATATTGCAGGTAACAATATCACACTCCAATGCAGAATAAAACAATTTATAAACAGATGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGAGGAGAAATTAGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGCAGTAACACAACAAATGGTGGCGAGAATGGGACCCAGATTGGCGAGAATGTGACCCAGATCTTCAGACCTGGAGGAGGGGATATGAGGGACAATTGGAGAAGTGAATTATACAAATATAAAGTAGTAAAAATTGAGCCATTAGGAATAGCACCCACCAAGGCAAAAAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTAACATTCGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACACTGACGGTACAGGCCAGACTATTATTGTCTGGTATAGTGCAACAGCAGAACAATCTGCTGAGAGCTATTGAGGCGCAACAACATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTTCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAGGGATCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTACTGTGCCTTGGAATGCTAGTTGGAGTAATAAAACTCTGGAAAAAATTTGGGGGAACATGACCTGGATGGAGTGGGAGAGAGAAATTGACAATTATACAGACTTAATATACACCTTAATTGAACAATCGCAGAACCAACAAGAAAAGAATGAACAAGAATTATTGGAATTGGATAAATGGGCAGGCTTGTGGAATTGGTTTGACATAACAAACTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGTTTAGTAGGTTTAAGAATAGTTTTTGCTGTGCTTTCTATAGTAAATAGAGTTAGGCAGGGATACTCACCATTATCATTCCAGACCCGCCTCCCAGCCTCGAGGGGACCCGACAGGCCCGAAGGAACCGACGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGATCATTAGTGAACGGATTCTTAGCACTCATCTGGATCGACCTGCGGAGTCTGTTCCTCTTCAGCTACCTCCGCTTGAGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAGGCCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCTGTTAGTTTGCTTAATGCTATAGCTATATCAGTAGCGGAGGGAACAGATAGGATTATAGAAGCAATACAAAGAATTTGTAGAGCTATCTTACACATACCTACAAGGATAAGACAGGGCTTAGAAAGGGCTTTGCTATAAGATGGGTGGCAAGGGGTCAAAAATGAGGGGATGGGTTGCTGTAAGGGAAAAAATGAGGCGAACTAA"
-        },
-        {
-            "name": "tat_exon2",
-            "orientation": "forward",
-            "start": 8359,
-            "end": 8455,
-            "distance": 0.4866666666666659,
-            "protein": "RPASQPRGDPTGPKEPTKKVERETETDPDH",
-            "aminoacids": "RPASQPRGDPTGPKEPTKKVERETETDPDH**",
-            "nucleotides": "AGACCCGCCTCCCAGCCTCGAGGGGACCCGACAGGCCCGAAGGAACCGACGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGATCATTAGTGA"
-        },
-        {
-            "name": "rev_exon2",
-            "orientation": "forward",
-            "start": 8360,
-            "end": 8636,
-            "distance": 0.39560439560439553,
-            "protein": "DPPPSLEGTRQARRNRRRRWRERQRQIRIISERILSTHLDRPAESVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKE",
-            "aminoacids": "DPPPSLEGTRQARRNRRRRWRERQRQIRIISERILSTHLDRPAESVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKE*",
-            "nucleotides": "GACCCGCCTCCCAGCCTCGAGGGGACCCGACAGGCCCGAAGGAACCGACGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGATCATTAGTGAACGGATTCTTAGCACTCATCTGGATCGACCTGCGGAGTCTGTTCCTCTTCAGCTACCTCCGCTTGAGAGACTTACTCTTGATTGCAGCGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAGGCCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAG"
-        },
-        {
-            "name": "nef",
-            "orientation": "forward",
-            "start": 8779,
-            "end": 9406,
-            "distance": 0.7422764227642202,
-            "protein": "MGGKGSKMRGWVAVREKMRRTKPEDEPAANGVGAASRDLEKYGALTSSNTVATNADLAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVHHTQGYLPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDQVEEANAGENNSLLHPMSLHGIEDPEKEVLMWKFDSHLAFRHMARELHPEYYKDC",
-            "aminoacids": "MGGKGSKMRGWVAVREKMRRTKPEDEPAANGVGAASRDLEKYGALTSSNTVATNADLAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVHHTQGYLPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDQVEEANAGENNSLLHPMSLHGIEDPEKEVLMWKFDSHLAFRHMARELHPEYYKDC*",
-            "nucleotides": "ATGGGTGGCAAGGGGTCAAAAATGAGGGGATGGGTTGCTGTAAGGGAAAAAATGAGGCGAACTAAGCCAGAAGATGAGCCAGCAGCAAATGGGGTGGGGGCAGCATCTCGAGACTTGGAGAAATATGGCGCACTCACAAGTAGCAATACAGTAGCTACTAATGCTGATTTAGCTTGGCTAGAAGCACAAGAGGAAGAGGAGGTGGGCTTTCCAGTCAGACCTCAAGTACCTTTAAGACCAATGACTTACAAGGGAGCTCTAGATCTCAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTTACTCCCAAAAAAGGCAAGATATCCTTGATCTGTGGGTTCACCACACACAAGGCTATCTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATCCCCTGACTTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATCAGGTAGAAGAGGCCAATGCAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATAGAGGACCCGGAGAAAGAAGTCTTAATGTGGAAGTTTGACAGCCACCTAGCATTCCGTCACATGGCCCGAGAGCTGCATCCGGAGTATTACAAAGACTGCTGA"
-        }
-    ],
-    "OQ092464": [
-        {
-            "name": "gag",
-            "orientation": "forward",
-            "start": 773,
-            "end": 2282,
-            "distance": 0.29294117647058937,
-            "protein": "MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDRWERIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSKGCRQILEQLQPALQTGSEELKSLYNTVATLYCVHQKIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQASQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQCTQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTTPGTIMMQRGNLRSQRKTVKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKEMYPLASLRSLFGNDPSSQ*R*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCGGTATTAAGCGGGGGAGAATTAGATAGATGGGAAAGAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGGTTCGCAGTTAATCCTGGCCTGTTAGAAACATCAAAAGGCTGTAGACAAATATTGGAACAGCTACAGCCAGCCCTTCAGACAGGATCAGAAGAACTTAAATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATCGATGTAAAAGACACCAAGGAAGCTTTAGATAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAGGAAACAACAGCCAGGCCAGCCAAAATTACCCTATAGTGCAGAACATTCAGGGGCAAATGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCGCTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCTATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATCTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGGATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAACAATGTACACAGGAGGTAAAAAATTGGATGACAGAAACATTATTGGTCCAAAATGCAAACCCAGATTGCAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCTGGCCATAAAGCAAGAGTTTTGGCAGAAGCAATGAGCCAAGTAACAACTCCAGGTACCATAATGATGCAGAGAGGCAATTTAAGGAGCCAAAGAAAGACTGTTAAGTGTTTCAACTGTGGCAAAGAAGGGCATATAGCTAAAAATTGCAGGGCTCCTAGGAAAAGGGGCTGTTGGAAATGTGGAAAAGAAGGACACCAAATGAAAGATTGCACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAAGAAATGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAG"
-        },
-        {
-            "name": "pol",
-            "orientation": "forward",
-            "start": 2068,
-            "end": 5080,
-            "distance": 0.16712734452122402,
-            "protein": "FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQRNVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMTLPGRWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEVIPLTREAELELAENREILKEPVHGVYYDPTKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFRLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKDKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQDDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGGNFISTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVYIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
-            "nucleotides": "TTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAAGAAATGTATCCTTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATGACTTTACCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCGTAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTAACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATCTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATATAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAATTAAGACAACATCTGTTGAAGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGATATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAGGACAGTTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAAGCAATTATGTAAACTCCTTAGGGGAACCAAGGCACTAACAGAAGTAATACCACTAACAAGAGAAGCAGAGCTAGAACTGGCAGAGAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCAACAAAAGACTTAATAGTAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGAGGTGCCCACACTAATGATGTAAAACAACTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAGTTTAGACTACCCATACAAAGAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAGACTTTCTATGTAGATGGTGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGATATGTTACTAACAGAGGAAGACAAAAAGTTGTCTCCCTAACTGACACAACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTTAATCAAATAATAGAACAGTTAATAAAAAAGGACAAGGTATACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGACGATCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGACTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGCCAGTTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACACTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAGGAAACAGCATACTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCGGCAATTTCATCAGTACTACAGTTAAGGCCGCCTGCTGGTGGGCGGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATACATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAGAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGACCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
-        },
-        {
-            "name": "vif",
-            "orientation": "forward",
-            "start": 5024,
-            "end": 5603,
-            "distance": 0.34375,
-            "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYISRKAKGWVYKHHYDSTHPRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPGLADQLIHLYYFDCFSESAIRNAILGHIVSPSCDYQAGHNKVGSLQYLALAALITPKKIKPPLPSVKKLTEDRWNKPQKTKGHRGSHTMNGH*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGGACATGGAAAAGTTTAGTAAAACACCATATGTATATTTCAAGGAAAGCTAAGGGATGGGTTTATAAGCATCACTATGACAGTACTCATCCAAGAATAAGTTCAGAAGTTCACATCCCGCTAGGGGATGCGAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAGAAGAGATATAGCACACAAGTAGACCCTGGCTTAGCAGACCAACTAATTCATCTGTATTACTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGCCATATTAGGACATATAGTTAGTCCTAGCTGTGATTATCAAGCAGGACATAACAAGGTAGGATCTCTACAGTACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTAAGAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAG"
-        },
-        {
-            "name": "vpr",
-            "orientation": "forward",
-            "start": 5542,
-            "end": 5833,
-            "distance": 0.33333333333333326,
-            "protein": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS",
-            "aminoacids": "MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHSLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGIIQRRRARNGASRS*",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACACTTTCCTAGGCCATGGCTCCACAGCTTAGGGCAACATATCTATGAAACATATGGAGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGCATCATTCAACGGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
-        },
-        {
-            "name": "tat_exon1",
-            "orientation": "forward",
-            "start": 5813,
-            "end": 6032,
-            "distance": 0.4027777777777777,
-            "protein": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ",
-            "aminoacids": "MEPVDPRLEPWKHPGSQPRTACTSCYCKQCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSQTHQASLSKQ*",
-            "nucleotides": "ATGGAGCCAGTAGATCCTAGATTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAGGACTGCTTGTACCTCTTGTTATTGTAAGCAGTGTTGCTTTCATTGCCAAGTTTGTTTCATAACAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCCTCCAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAGTAA"
-        },
-        {
-            "name": "rev_exon1",
-            "orientation": "forward",
-            "start": 5952,
-            "end": 6030,
-            "distance": 0.34615384615384626,
-            "protein": "MAGRSGDSDEELLQTVRLIKLLYQSS",
-            "aminoacids": "MAGRSGDSDEELLQTVRLIKLLYQSS",
-            "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCCTCCAGACAGTCAGACTCATCAAGCTTCTCTATCAAAGCAGT"
-        },
-        {
-            "name": "vpu",
-            "orientation": "forward",
-            "start": 6044,
-            "end": 6290,
-            "distance": 0.2962962962962963,
-            "protein": "MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL",
-            "aminoacids": "MQPLHIAAIVALVVAIIIAIVVWSIVFIEYRKILRQRKIDRIIDRIRERAEDSGNESEGDQEELSALVEMGHCAPWDVNDL*",
-            "nucleotides": "ATGCAACCTTTACACATAGCAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGTGTGGTCTATAGTATTCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGATAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAGGGGGATCAAGAAGAATTATCAGCACTTGTGGAGATGGGGCATTGTGCTCCTTGGGATGTTAATGATCTGTAG"
-        },
-        {
-            "name": "env",
-            "orientation": "forward",
-            "start": 6207,
-            "end": 8790,
-            "distance": 0.4719298245614041,
-            "protein": "MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL",
-            "aminoacids": "MRVRGIKKNYQHLWRWGIVLLGMLMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNYNNTNNTTSTNDTTSTTTSSGEKMKEGEIKNCSFNITTSIRDKVQKEYALFYKPDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFSDNAKTIIVHLNESVEITCIRPNNNTRKSIPIGPGRAFYATGAIIGDIRQAHCKINKTKWNNTLDQIFKKLREQFGNKTIIFTHSSGGDPEVVTHNFNCGGEFFYCNTTKLFNSTWNETSYWKDERSNDNDTITLPCRIKQIINLWQEVGKAMYAPPIRGYIKCSSNITGLLITRDGGKNESNTTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWDNMTWMEWEREIDNYTSLIYTLIEKSQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRDRSGPLVNGFLTIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWELLKYWWNLLQYWSQELKNSAISLLNATAIAVAEGTDRIIEVLQRAGRAFLHIPRRIRQGLERALL*",
-            "nucleotides": "ATGAGAGTGAGGGGGATCAAGAAGAATTATCAGCACTTGTGGAGATGGGGCATTGTGCTCCTTGGGATGTTAATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATACAGAGGTACATAATGTTTGGGCTACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGGAAATGTGACAGAGAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGTCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTGAATTGCACTAATTATAATAACACCAATAATACCACTAGTACCAATGATACCACTAGTACCACTACTAGTAGCGGGGAAAAGATGAAGGAAGGAGAGATAAAAAACTGCTCTTTCAATATCACCACAAGCATAAGAGATAAGGTGCAGAAAGAATATGCACTCTTTTATAAACCTGATATAGTACCAATAGATAATGATAATACTAGTTATAGGTTGATAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCAGCTGGTTTTGCGATTCTAAAGTGTAACGATAAGAAGTTCAATGGAACAGGATCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTGTCAACTCAACTACTGTTAAATGGCAGTCTAGCAGAAGAAGAGGTAGTAATTAGATCTGAAAATTTCTCAGACAATGCTAAAACCATAATAGTACATCTGAATGAATCTGTAGAAATTACTTGTATAAGACCCAACAACAATACAAGAAAAAGTATACCTATAGGACCAGGGAGAGCATTTTATGCAACAGGAGCCATAATAGGAGATATAAGACAAGCACATTGTAAAATTAATAAAACGAAATGGAATAACACTTTAGACCAGATATTTAAAAAGTTAAGAGAACAATTTGGGAATAAGACAATAATCTTTACTCACTCCTCAGGAGGGGACCCAGAAGTTGTAACGCACAATTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACAACAAAACTGTTTAATAGTACTTGGAATGAGACTAGTTATTGGAAGGATGAAAGGTCAAATGACAATGACACTATCACACTCCCATGCAGAATAAAGCAAATTATAAACCTGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATTAGAGGATACATTAAATGTTCATCAAATATCACAGGGCTGCTAATAACAAGAGATGGTGGGAAAAACGAGAGCAACACCACCGAGACCTTCAGACCTGGAGGAGGAAATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAATAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTGTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATAACGCTGACGGTACAGGCCAGACTATTATTGTCTGGTATAGTGCAACAGCAAAACAATCTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGAATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGGATAACATGACCTGGATGGAATGGGAAAGAGAAATTGACAATTACACAAGCTTAATATACACTTTAATTGAAAAATCGCAAAACCAACAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTGACATAACAAAGTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGCGAATAGAGTTAGGCAGGGATACTCACCATTATCGTTTCAGACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAACTCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAGTGCTATTAGCTTGCTTAATGCCACAGCCATAGCAGTAGCTGAGGGGACAGATAGGATTATAGAAGTATTACAAAGAGCTGGGAGAGCTTTTCTCCACATACCTAGAAGAATAAGACAGGGCTTAGAAAGGGCTTTGCTATAA"
-        },
-        {
-            "name": "tat_exon2",
-            "orientation": "forward",
-            "start": 8371,
-            "end": 8467,
-            "distance": 0.30000000000000004,
-            "protein": "RPTSQPRGDPTGQKESKKKVERETETDPDH",
-            "aminoacids": "RPTSQPRGDPTGQKESKKKVERETETDPDH**",
-            "nucleotides": "AGACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGA"
-        },
-        {
-            "name": "rev_exon2",
-            "orientation": "forward",
-            "start": 8372,
-            "end": 8648,
-            "distance": 0.3626373626373627,
-            "protein": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE",
-            "aminoacids": "DPPPSPEGTRQARRNRRRRWRERQRQIRTISERILNNYLGRPAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGTPQILVESPAVLESGTKE*",
-            "nucleotides": "GACCCACCTCCCAGCCCCGAGGGGACCCGACAGGCCAGAAGGAATCGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGACCATTAGTGAACGGATTCTTAACAATTATCTGGGTCGACCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAACTCCTCAAATATTGGTGGAATCTCCTGCAGTATTGGAGTCAGGAACTAAAGAATAG"
-        },
-        {
-            "name": "nef",
-            "orientation": "forward",
-            "start": 8791,
-            "end": 9511,
-            "distance": 0.39068627450980387,
-            "protein": "MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC",
-            "aminoacids": "MGGKWSKSSVVGWPAIRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAFHHMARELHPEYYKDC*HRAFYKGLSAGDFPGRRGRGGTGEWRALRCCI*",
-            "nucleotides": "ATGGGTGGTAAGTGGTCAAAGAGTAGTGTGGTTGGATGGCCTGCTATAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGATTGTGCCTGGCTAGAAGCACAAGAGGATGAGGAGGTGGGTTTTCCAGTCAGGCCTCAGGTACCTTTAAGACCAATGACTTACAAGGGAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAAAAGACAAGATATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGGTATCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGAGGCCAATGAAGGAGAGAACAACAGCTTGTTACACCCTATGAGCCTGCATGGGATGGATGACCCAGAGAAAGAAGTGTTAGTATGGAGGTTTGACAGTCGCCTGGCATTTCATCACATGGCCCGAGAGCTGCATCCGGAGTACTACAAGGACTGCTGACATCGAGCTTTCTACAAGGGACTTTCCGCTGGGGACTTTCCAGGGAGGCGTGGCCGGGGCGGGACTGGGGAGTGGCGAGCCCTCAGATGCTGCATATAA"
-        }
-    ],
-    "OQ092467": [
-        {
-            "name": "gag",
-            "orientation": "forward",
-            "start": 808,
-            "end": 2308,
-            "distance": 0.24380000000000002,
-            "protein": "MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEEFRSLYNTVATLYCVHQKIEVKDTKEALEKIEEEQNQSKKKAAAAAADTGNRSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTIGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSNLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSTVMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSKPEPTAPPEESFRFGEETTTPSQKQGPIDKELYPLASLKSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHLVWASRELERFAVNPGLLETSEGCRQILGQLQPALQTGSEEFRSLYNTVATLYCVHQKIEVKDTKEALEKIEEEQNQSKKKAAAAAADTGNRSQVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTIGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSNLQEQIGWMTHNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSTVMMQRGNFRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSKPEPTAPPEESFRFGEETTTPSQKQGPIDKELYPLASLKSLFGNDPSSQ*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGATAAATGGGAAAAAATTCGGTTAAGGCCAGGAGGAAAAAAACAATACAAATTAAAACATCTAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTTCTAGAGACATCAGAAGGGTGTAGACAAATACTGGGACAGCTACAACCAGCTCTTCAGACAGGATCAGAAGAATTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATAGAGGTAAAAGACACCAAGGAAGCTTTAGAGAAAATAGAGGAAGAGCAAAACCAAAGTAAGAAAAAAGCAGCAGCTGCAGCAGCTGACACAGGAAACAGAAGCCAGGTCAGCCAAAATTACCCTATAGTGCAGAACCTCCAGGGGCAAATGGTACATCAGCCTTTATCACCTAGAACTTTAAATGCATGGGTAAAAGTAATAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTACAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAATAGGTGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATTAATGAGGAAGCTGCAGAATGGGATAGATTGCATCCAGTGCAGGCAGGGCCTGTTGCACCAGGCCAAATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTAACCTTCAGGAACAAATAGGATGGATGACACATAATCCACCTATCCCAGTAGGAGATATCTATAAAAGATGGATAATTCTGGGGTTAAATAAAATAGTAAGAATGTATAGCCCTGTCAGTATTCTGGATATAAAACAAGGACCAAAGGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTGAGAGCCGAGCAAGCAACACAGGAAGTAAAGAATTGGATGACAGAAACTTTGCTGGTCCAAAATGCAAATCCAGATTGTAAGACTATTTTAAAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGGGGACCAGGCCACAAAGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAATTCAACTGTAATGATGCAGAGAGGCAATTTTAGGAATCAAAGAAAGACAGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCATATAGCAAGAAATTGCAGGGCCCCTAGAAAAAAGGGCTGTTGGAAATGTGGAAAAGAAGGGCACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAAACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCCCTCTCAGAAGCAGGGGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
-        },
-        {
-            "name": "pol",
-            "orientation": "forward",
-            "start": 2100,
-            "end": 5112,
-            "distance": 0.14356929212362912,
-            "protein": "FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGKWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQSQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIAIESIVIWGKTPKFKLPIQKETWETWWTDYWQATWIPDWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETRSGKAGYVTDRGRQKVVPLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKILFLDGITKAQDDHERYHSNWRAMASDFNLPPIIAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSAAVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
-            "aminoacids": "FFREDLAFPQGEAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGKWKPKMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTAEAELELAENREILKEPVHGVYYDPTKDLIAELQKQGQSQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKIAIESIVIWGKTPKFKLPIQKETWETWWTDYWQATWIPDWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETRSGKAGYVTDRGRQKVVPLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSSGIRKILFLDGITKAQDDHERYHSNWRAMASDFNLPPIIAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSAAVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
-            "nucleotides": "TTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGGAATTTTCTTCAGAGCAAACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCCCTCTCAGAAGCAGGGGCCGATAGACAAGGAACTGTATCCTTTAGCTTCCCTCAAATCACTCTTTGGCAACGACCCCTCGTCACAATAAAAATAGGGGGGCAGCTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGATATGAATTTACCAGGAAAATGGAAACCAAAAATGATAGGAGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCGTAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGCTGTACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCTATAAAGAAAAAAGATAGTACTAAATGGAGAAAGTTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCGCATCCTGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGTGATGCCTATTTTTCAATTCCCTTAGATAAAGACTTCAGGAAGTACACTGCATTTACCATACCTAGTACAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAGGATATTAGAACCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTGGGATCTGACTTAGAAATAGGACAGCATAGAACAAAAATAGAGGAACTGAGACAACATCTGTTGAAGTGGGGACTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAAGCTGCCAGAAAAAGATAGCTGGACTGTCAATGACATCCAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTATGCAGGAATTAAAGTAAGGCAATTATGTAAACTCCTTAGGGGAACTAAAGCACTAACAGAAGTAGTACCACTAACAGCAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCGGTACATGGAGTGTATTATGACCCAACGAAAGACCTAATAGCAGAACTACAGAAGCAGGGGCAAAGTCAATGGACATATCAAATTTATCAAGAACCATTTAAAAATCTGAAAACAGGAAAGTATGCAAGAATGAGGGGTGCCCACACTAATGATGTGAAACAATTAACAGAGGCAGTGCAAAAAATAGCCATAGAAAGCATAGTAATATGGGGAAAGACCCCTAAATTTAAATTACCTATACAAAAAGAAACATGGGAAACATGGTGGACAGACTATTGGCAAGCCACCTGGATTCCTGATTGGGAGTTTGTCAATACCCCTCCCTTAGTAAAATTATGGTACCAGTTAGAAAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGAGAAACTAGATCAGGCAAAGCAGGATATGTTACTGATAGAGGAAGACAAAAGGTTGTCCCCCTAACAGACACAACAAACCAGAAGACTGAGTTACAAGCAATTTATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTGACAGACTCACAATATGCACTAGGAATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGTTAATAAAGAAGGAAAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTTCTGGAATCAGGAAGATACTATTTTTAGATGGAATAACTAAGGCCCAAGATGATCATGAGAGATACCACAGCAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTATAATAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCACGCATGGACAAGTAGACTGCAGTCCAGGAATATGGCAACTAGATTGTACGCATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAAGAAACAGCATACTTTCTCTTAAAACTAGCAGGAAGATGGCCAGTAAAGACAGTACATACAGATAATGGCAGCAATTTCACCAGTGCTGCGGTTAAGGCCGCCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGTATTCCCTACAATCCCCAAAGTCAAGGAGTCATAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAAGTAAGAGAGCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAGAAACAAATCACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGACCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAGGCAAAGATCATTAGAGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
-        },
-        {
-            "name": "vif",
-            "orientation": "forward",
-            "start": 5056,
-            "end": 5644,
-            "distance": 0.43229166666666674,
-            "protein": "MENRWQVMIVWQVDRMRIRTWNSLVKHHIHVSKKAKGWVYRHHYESTHPRISSEVHIPLGEARLVIATYWGLHTGERDWHLGQGVSIEWREKKYITQVDPDLADQLIHLHYFDCFSESAIRNAIVGRLVSPQCEYQTGHNKVGSLQYLALVALITPKKRKPPLPSVRKLTEDRWNKPQKTKDHRGSHIMSGH",
-            "aminoacids": "MENRWQVMIVWQVDRMRIRTWNSLVKHHIHVSKKAKGWVYRHHYESTHPRISSEVHIPLGEARLVIATYWGLHTGERDWHLGQGVSIEWREKKYITQVDPDLADQLIHLHYFDCFSESAIRNAIVGRLVSPQCEYQTGHNKVGSLQYLALVALITPKKRKPPLPSVRKLTEDRWNKPQKTKDHRGSHIMSGH*SF*",
-            "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATACATGTCTCAAAGAAAGCTAAGGGATGGGTTTATAGACACCACTATGAAAGCACCCATCCAAGAATAAGTTCAGAAGTACATATCCCGCTAGGGGAAGCTAGATTAGTAATAGCAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCACTTGGGTCAGGGAGTCTCCATAGAATGGAGGGAAAAGAAATATATCACACAAGTAGACCCTGACCTAGCAGACCAACTAATTCATCTGCATTATTTTGATTGTTTTTCAGAGTCTGCTATAAGAAATGCCATAGTAGGACGTTTAGTTAGCCCTCAGTGTGAATATCAAACAGGACATAACAAGGTAGGATCTCTACAGTACTTGGCACTAGTAGCATTAATAACGCCAAAAAAGAGAAAGCCACCTTTGCCTAGTGTTAGGAAATTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGACCACAGAGGGAGCCATATAATGAGTGGACACTAGAGCTTTTAG"
-        },
-        {
-            "name": "vpr",
-            "orientation": "forward",
-            "start": 5574,
-            "end": 5868,
-            "distance": 0.4807692307692313,
-            "protein": "MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHNLGQYIYATYGDTWTGVEALIRILQQLLFIHFRIGCQHSRIGITRQRRARNGASRS",
-            "aminoacids": "MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHNLGQYIYATYGDTWTGVEALIRILQQLLFIHFRIGCQHSRIGITRQRRARNGASRS*T",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGACCACAGAGGGAGCCATATAATGAGTGGACACTAGAGCTTTTAGAGGAACTTAAGAGTGAAGCTGTTAGACATTTTCCTAGGATATGGCTCCATAACTTAGGACAATACATCTATGCAACTTATGGGGATACTTGGACAGGAGTGGAAGCTTTAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGATGTCAACATAGCAGAATAGGCATTACTCGACAGAGGAGAGCAAGGAATGGAGCCAGTAGATCCTAGACT"
-        },
-        {
-            "name": "tat_exon1",
-            "orientation": "forward",
-            "start": 5845,
-            "end": 6064,
-            "distance": 0.29166666666666674,
-            "protein": "MEPVDPRLEPWKHPGSQPKTPCTNCYCKKCCFHCQVCFIKKALGISYGRKKRRQRRRPPQNSETHQAALSKQ",
-            "aminoacids": "MEPVDPRLEPWKHPGSQPKTPCTNCYCKKCCFHCQVCFIKKALGISYGRKKRRQRRRPPQNSETHQAALSKQ*",
-            "nucleotides": "ATGGAGCCAGTAGATCCTAGACTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAGACTCCTTGTACCAATTGCTATTGTAAAAAGTGTTGCTTTCATTGCCAAGTCTGTTTCATAAAAAAAGCCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAAACAGTGAGACTCATCAAGCAGCTCTATCAAAGCAGTAA"
-        },
-        {
-            "name": "rev_exon1",
-            "orientation": "forward",
-            "start": 5984,
-            "end": 6065,
-            "distance": 0.6346153846153846,
-            "protein": "MAGRSGDSDEDLLKTVRLIKQLYQSSK",
-            "aminoacids": "MAGRSGDSDEDLLKTVRLIKQLYQSSK",
-            "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAAACAGTGAGACTCATCAAGCAGCTCTATCAAAGCAGTAAG"
-        },
-        {
-            "name": "vpu",
-            "orientation": "forward",
-            "start": 6076,
-            "end": 6340,
-            "distance": 0.5439024390243903,
-            "protein": "MQPLVILAIVALVVAAIIAIVVWTIVLIEYRKILRQRKIDSIINRIRERAEDSGNESEGDQEELSALVEMGHHVEMGHHAPWNVDDL",
-            "aminoacids": "MQPLVILAIVALVVAAIIAIVVWTIVLIEYRKILRQRKIDSIINRIRERAEDSGNESEGDQEELSALVEMGHHVEMGHHAPWNVDDL*",
-            "nucleotides": "ATGCAACCCTTAGTAATATTAGCAATAGTAGCATTAGTAGTAGCAGCAATAATAGCAATAGTTGTGTGGACCATAGTGTTAATAGAATATAGGAAAATATTAAGACAAAGAAAGATAGATAGCATAATTAATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAAGGAGATCAGGAAGAATTGTCGGCACTTGTGGAGATGGGGCACCATGTGGAAATGGGGCACCATGCTCCTTGGAATGTTGATGATCTGTAG"
-        },
-        {
-            "name": "env",
-            "orientation": "forward",
-            "start": 6239,
-            "end": 8807,
-            "distance": 0.49988317757009404,
-            "protein": "MRVKEIRKNCRHLWRWGTMWKWGTMLLGMLMICSAKEQLWVTVYYGVPVWKEATTTLFCASNAKAYDPEVHNVWATHACVPTDPNPQEVPLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILNCTNVNVTTNNNSSSEEQMEVGEIKNCSFNIATRIKNKIKKEYALFNRLDVVPIEDDNTSYMLINCNTSVTTQACPKVTFEPIPIHYCAPAGFAILKCNDKKFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVVRSENFTNNAKTIIVQLNKTIEINCIRPNNNTRKSISLRPGQAIYATEDIIGNIRQAHCNIRRKDWDKALEQVVAKLREQFKNKTIVFNQSSGGDPEIVMHSFNCAGEFFYCNTTKLFNSTWNVNNTRNNTTDNSTITLPCRIKQIINRWQEVGKAMYAPPIKGQIKCSSNITGLLLTRDGGVREDNAPEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQRGKRAVTLGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLEKIWKNMTWMEWEKEINNYTRTIYTLIEESQNQQEKNEQELLELDKWASLWNWFDITNWLWYIKIFIMIVGGIVGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGTEEEGGERDRDRSGQLVNGFFALIWDDLQSLCLFSYRRLRDLLLIVARIVELLGHRGWEALKYWWNLLQYWSQELKKSAVSLLNATAIAVAEGTDRVIEVVQRIGRAILHIPRRIRQGLERALL",
-            "aminoacids": "MRVKEIRKNCRHLWRWGTMWKWGTMLLGMLMICSAKEQLWVTVYYGVPVWKEATTTLFCASNAKAYDPEVHNVWATHACVPTDPNPQEVPLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILNCTNVNVTTNNNSSSEEQMEVGEIKNCSFNIATRIKNKIKKEYALFNRLDVVPIEDDNTSYMLINCNTSVTTQACPKVTFEPIPIHYCAPAGFAILKCNDKKFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVVRSENFTNNAKTIIVQLNKTIEINCIRPNNNTRKSISLRPGQAIYATEDIIGNIRQAHCNIRRKDWDKALEQVVAKLREQFKNKTIVFNQSSGGDPEIVMHSFNCAGEFFYCNTTKLFNSTWNVNNTRNNTTDNSTITLPCRIKQIINRWQEVGKAMYAPPIKGQIKCSSNITGLLLTRDGGVREDNAPEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQRGKRAVTLGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLEKIWKNMTWMEWEKEINNYTRTIYTLIEESQNQQEKNEQELLELDKWASLWNWFDITNWLWYIKIFIMIVGGIVGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGTEEEGGERDRDRSGQLVNGFFALIWDDLQSLCLFSYRRLRDLLLIVARIVELLGHRGWEALKYWWNLLQYWSQELKKSAVSLLNATAIAVAEGTDRVIEVVQRIGRAILHIPRRIRQGLERALL*",
-            "nucleotides": "ATGAGAGTGAAGGAGATCAGGAAGAATTGTCGGCACTTGTGGAGATGGGGCACCATGTGGAAATGGGGCACCATGCTCCTTGGAATGTTGATGATCTGTAGTGCTAAAGAACAATTGTGGGTCACAGTTTATTATGGGGTACCTGTGTGGAAAGAAGCAACCACCACTTTATTTTGTGCATCAAATGCTAAAGCATATGACCCAGAGGTGCATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCTAACCCACAAGAAGTACCATTGGAAAATGTGACAGAAAATTTTAATATGTGGAAAAATAACATGGTAGAACAGATGCATGAGGACATAATCAGTTTATGGGATCAAAGCTTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTATTTTAAATTGCACTAATGTGAATGTTACTACTAACAATAATAGTAGTAGTGAGGAACAGATGGAGGTAGGAGAAATAAAAAACTGCTCTTTCAATATTGCCACAAGAATAAAAAATAAGATAAAGAAAGAATATGCACTTTTTAATAGACTTGATGTAGTACCAATAGAGGATGATAATACAAGCTATATGTTGATAAATTGTAATACCTCAGTCACTACACAGGCCTGTCCAAAGGTAACCTTTGAACCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATACTAAAATGTAATGATAAAAAGTTCAATGGAACAGGACCATGTAACAATGTCAGCACAGTACAATGTACACATGGAATTAAGCCAGTAGTGTCAACTCAACTGCTGTTAAATGGTAGTCTAGCAGAAGAAGAGATAGTAGTTAGATCTGAAAATTTCACGAACAATGCTAAAACCATAATAGTACAGCTGAATAAAACTATAGAAATTAATTGTATAAGACCCAACAATAATACAAGAAAAAGTATATCTTTAAGACCGGGGCAAGCAATTTATGCAACAGAAGACATAATAGGAAATATAAGACAAGCACATTGTAACATTAGGAGAAAAGACTGGGATAAAGCTTTAGAACAGGTAGTTGCAAAATTAAGAGAACAATTTAAGAATAAAACAATAGTCTTTAATCAATCCTCAGGAGGAGACCCAGAAATTGTAATGCATAGTTTTAATTGTGCAGGGGAATTTTTCTACTGTAACACAACAAAGCTGTTTAATAGTACTTGGAATGTTAATAACACTCGGAATAATACTACTGATAATAGCACCATCACTCTCCCGTGCAGAATAAAACAAATTATAAACAGATGGCAGGAAGTAGGAAAAGCAATGTATGCTCCTCCCATCAAAGGGCAAATTAAATGTTCATCAAATATTACAGGGTTATTATTAACAAGAGATGGTGGTGTCCGCGAGGACAACGCCCCTGAGATCTTTAGACCTGGAGGAGGAGATATGAGGGATAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAGCCATTAGGAGTGGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAAAGAGGAAAAAGAGCAGTAACGCTGGGAGCTATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGGCAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATCTGCTGAGGGCTATTGAGGCGCAACAGCATATGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACTTACAGGATCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCACTGCTGTACCTTGGAATACTAGTTGGAGTAATAAATCTTTGGAAAAGATTTGGAAAAACATGACCTGGATGGAGTGGGAGAAAGAAATTAACAATTACACAAGGACAATATACACCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAGGAATTATTGGAATTGGATAAGTGGGCAAGTTTGTGGAATTGGTTTGACATAACAAACTGGCTGTGGTATATAAAAATATTCATCATGATAGTAGGAGGTATAGTAGGGTTAAGAATAGTTTTTACTGTGCTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTGTCATTCCAGACCCGCTTCCCAGCTCCGAGGGGACCAGACAGGCCCGAAGGAACAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGGCAATTAGTGAACGGATTCTTTGCGCTTATCTGGGACGACCTGCAGAGCCTGTGCCTCTTCAGCTACCGCCGCTTGAGAGACTTACTCTTGATTGTAGCGAGGATTGTGGAACTTCTGGGACACAGGGGGTGGGAGGCCCTCAAATATTGGTGGAATCTCCTGCAGTACTGGAGTCAGGAACTAAAGAAGAGTGCTGTTAGTTTGCTTAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAAGAATTGGTAGAGCTATTCTCCACATCCCTAGAAGAATAAGACAGGGCTTAGAAAGGGCTTTGCTATAA"
-        },
-        {
-            "name": "tat_exon2",
-            "orientation": "forward",
-            "start": 8388,
-            "end": 8484,
-            "distance": 0.886666666666666,
-            "protein": "RPASQLRGDQTGPKEQKKKVERETETDPGN",
-            "aminoacids": "RPASQLRGDQTGPKEQKKKVERETETDPGN**",
-            "nucleotides": "AGACCCGCTTCCCAGCTCCGAGGGGACCAGACAGGCCCGAAGGAACAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGGCAATTAGTGA"
-        },
-        {
-            "name": "rev_exon2",
-            "orientation": "forward",
-            "start": 8389,
-            "end": 8674,
-            "distance": 0.38351648351648326,
-            "protein": "DPLPSSEGTRQARRNRRRRWRERQRQIRAISERILCAYLGRPAEPVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKEECC",
-            "aminoacids": "DPLPSSEGTRQARRNRRRRWRERQRQIRAISERILCAYLGRPAEPVPLQLPPLERLTLDCSEDCGTSGTQGVGGPQILVESPAVLESGTKEECC*",
-            "nucleotides": "GACCCGCTTCCCAGCTCCGAGGGGACCAGACAGGCCCGAAGGAACAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCGGGCAATTAGTGAACGGATTCTTTGCGCTTATCTGGGACGACCTGCAGAGCCTGTGCCTCTTCAGCTACCGCCGCTTGAGAGACTTACTCTTGATTGTAGCGAGGATTGTGGAACTTCTGGGACACAGGGGGTGGGAGGCCCTCAAATATTGGTGGAATCTCCTGCAGTACTGGAGTCAGGAACTAAAGAAGAGTGCTGTTAG"
-        },
-        {
-            "name": "nef",
-            "orientation": "forward",
-            "start": 8808,
-            "end": 9417,
-            "distance": 0.6048780487804808,
-            "protein": "MGGKWSKCSLVGWPAIRERMRRAEPAPAAEGVGAASRDLEKHGALTTSNTAANNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGAMDLGHFLKEKGGLEGLIYSPKRQEILDLWVYHTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPDEGENSCLLHPMNQHGADDTEREVLMWKFDSSLAFHHKARELHPEYYKNC",
-            "aminoacids": "MGGKWSKCSLVGWPAIRERMRRAEPAPAAEGVGAASRDLEKHGALTTSNTAANNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGAMDLGHFLKEKGGLEGLIYSPKRQEILDLWVYHTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPDEGENSCLLHPMNQHGADDTEREVLMWKFDSSLAFHHKARELHPEYYKNC*",
-            "nucleotides": "ATGGGTGGCAAGTGGTCAAAATGTAGTCTGGTTGGATGGCCTGCTATAAGGGAAAGAATGAGACGAGCTGAGCCAGCTCCAGCAGCAGAAGGGGTGGGAGCAGCATCTCGAGACTTGGAAAAACATGGAGCACTCACAACTAGTAATACAGCAGCTAATAATGCTGCTTGTGCCTGGCTGGAAGCACAAGAGGAGGAAGAGGTGGGGTTTCCAGTCAGACCTCAGGTACCTTTAAGACCAATGACTTACAAAGGAGCTATGGATCTTGGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTTACTCCCCAAAAAGACAAGAAATCCTTGATCTGTGGGTCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTATACACCAGGGCCAGGGACTAGATATCCATTAACCTTTGGATGGTGCTTCAAGCTAGTACCAGTTGAGCCAGATGAAGGAGAGAATAGCTGTTTGCTACACCCGATGAACCAGCATGGGGCAGATGACACAGAAAGAGAAGTATTAATGTGGAAGTTTGACAGCAGCCTAGCATTTCATCACAAGGCCCGAGAGCTGCATCCGGAGTACTACAAAAACTGCTGA"
-        }
     ]
 }
\ No newline at end of file
diff --git a/tests/expected-results-single-csv/blast.csv b/tests/expected-results-single-csv/blast.csv
index b51524a..6830cf2 100644
--- a/tests/expected-results-single-csv/blast.csv
+++ b/tests/expected-results-single-csv/blast.csv
@@ -1,7 +1,4 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
diff --git a/tests/expected-results-single-csv/errors.csv b/tests/expected-results-single-csv/errors.csv
index ebed64b..5a96cb0 100644
--- a/tests/expected-results-single-csv/errors.csv
+++ b/tests/expected-results-single-csv/errors.csv
@@ -1,4 +1,3 @@
 sequence_name,error,message
 MN692145,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN692145,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-MN692145,Scramble,Sequence is plus-scrambled.
diff --git a/tests/expected-results-single/blast.csv b/tests/expected-results-single/blast.csv
index b51524a..6830cf2 100644
--- a/tests/expected-results-single/blast.csv
+++ b/tests/expected-results-single/blast.csv
@@ -1,7 +1,4 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
diff --git a/tests/expected-results-single/errors.json b/tests/expected-results-single/errors.json
index caabdda..d7e98bc 100644
--- a/tests/expected-results-single/errors.json
+++ b/tests/expected-results-single/errors.json
@@ -9,11 +9,6 @@
             "sequence_name": "MN692145",
             "error": "InsertionInOrf",
             "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-        },
-        {
-            "sequence_name": "MN692145",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
         }
     ]
 }
\ No newline at end of file
diff --git a/tests/expected-results-small-csv/blast.csv b/tests/expected-results-small-csv/blast.csv
index 8fb23a2..530b4f1 100644
--- a/tests/expected-results-small-csv/blast.csv
+++ b/tests/expected-results-small-csv/blast.csv
@@ -1,21 +1,18 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,1938,1,1691,545,2481,0.0,1676,82.147,1592,plus,49-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N6GA1AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-N-NANTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG9-N-N-N7TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG12-N-N-N8AG44CT17TC47TC27TG99CG10-N-N-N-N-N-N-N-N-N26GA23AG2GA30GATC36TC32CT11AG5CTAT7AG30-N-N-N5GA20AG17AG8AG2CT26CT8GA9AG7AG27-N-N-N-N-N-N-N-N-N3AG1GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5ACGA12AG24AG-N-N-N1CT9CT25TC24AG25GA9TC11CT6-N-N-N-N-N-N-N-N-N18GT1-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N9GA8CT7AG6
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,196,1809,1997,448,643,3.77e-58,222,92.347,181,plus,12GNTNAN2-G-A26-N7-N9GC21CT9GTAG46GA2-N21-N9-N17
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,200,2,180,10730,10929,2.85e-51,199,89.500,179,plus,21-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,9890,329,9278,569,10443,0.0,9284,83.893,8297,plus,11TC10AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA1AG3-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT4AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NCA12-N-N14-G-A-A-G-A-A9AG17-N-N-N-NAC5-N-N3-N-N-N-N-N11-T5-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49CA39AG33GA32GT5AG42TG27GA8AT31CGAC10AG25GA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG5CA1CA1GA5AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG7AG20CTAC4GA6GA64TC6-N-N-N147GT16AC93-N-N-N-N-N-N-N-N-N7YCWAYC2WA16TA5AG67GA12AG23CT15CT7CT8TC8GA30-N-N-N9GT16GA23WA26AC14GA2AG14GA2AG14AG9-N-N-N-N-N-N-N-N-N10AG1TG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGC2AG23TCTA3GA10AG1-N-N-N1TC60GN22GN4GN19GT6-N-N-N-N-N-N-N-N-NGN12AN6-N9CT9TC4-N-N-N-N-N-N-N-N-N-N-N-N3AG44-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N17CT5-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTN18-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AG9GA14AG6CA1CA23AG20TC33AGGA87CTTA11GA65AC4TC17CT59TC57AC13GA42GA25TC83TC2CT2AG35TC33GA39TC33CT71TC74AG16AG6GA2GA2GA9CT4GA1GA7CT2AGCA30TC75ACGN4AN32TN22CT44CT1GA4TC8GA2AG12AC18GA11GA2AG39TA34GA56GA2AG7GA1AGCT15TA39AG1CT8TC18-N-N-N7GA7CT13GA12AG13AG50TC26GA2AG47CT5GA5AG14GA9AG3AG3AG8GA3GA5CA3CATGAG35TC13GA5GA3TC62CA1AG19AG39TC11AG47CT3GA14AG32-N-N-N2TA69-N-N-N17CT3GA8-N-N-N56AG27GA70GA11TC5TC32AC18ACGC8CT4GA2AG1GA26AG17AC80TG14TC26CT34GA3CT18GA43AG3-N-N-N74CT56GA17GA63-N-N28CT11GATGTG13GAGAGAGA27AT11AG15TC16TG-N-N-N-N-N-N4GA3GA78AG12GC18AC21CG7CT5CT11CA14GT3TA9AG1AT38-N-N-N8AG8AG16CT16-N-N-N-N-N-N-N-N-N-N-N-N28CGAG31AG20GA6CT6AC2-N14TC7GA7AG25AGTGTA3-N-N-N14GA39-N-N-N9AC31CT3-N-N-N11GA4GA16GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2AGGAAGAG5CT3AG15TN-N-C41AG10CA2CA44TCGA1CG5CG37-N-N-N-N-N-N9CA7AG20TA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2AT2-A2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-T1AG26AGTC21AGTA1CT5AGAT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT15CA3TG22-N-N5GA8-G-G-A-T-C-A-G-G-A4GT1GA5AT13GNGNGNTNGNGNANGNANTNGNGN4CT13-N-N-N-N-N-N1TCAG26AT-N-N-N-N-N-N38GA17AC29TAGA49CT12GC7GA1TA21CT12GA25TC18CG10GA8AG22GC6GT9T-T-G-1GCGC3GACT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1AT6GA2GT2AC1AG-G-T-T6GA2GA3CTGAGA-T-T-T4ACTA4A-T-G-G-A-1AC2G-4GA4AGAT19GC5GC5GA7GATGGA4AG5AT4TC1CG2TGTAAG32CG1ATCACT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT4CT5CT2GA6CT27-N-N-N12GC1GA21GA32AG6CA3CT8AG10CA16-N-N-N26AG2AG5TC3CT1GA30-N-N-N15GACACA15GA1TC23CGCG52CA1GA3CACNANGNANGNAN18GTTA1AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N3AG5-A-T-A3AG4GA-N-N-N-N-N-N-N-N-N-N-N-N18AC21CA9AC7CT1AG1CA12CTAT2TA1GAGAAG3ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AG7GTCTAC15CT13CT16GA23TA7AG18TNTNTNANANTNANGNTNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-A2-T2GA1AG2GAACAT3TACAATAGAG2ACCT2TA3GCGC2GA1GAAGCT2AT2CA24TA5-N-N-N4TGGA38CTAGGCCA11AC-N-N-N11TC2TC20AG9AGAG1AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T-G1CG6GA1GCTA10CT23GA47AG5AG27-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA53AG20-N-N-N-N-N-N-N-N-N23GA5GA39TC22CT2AG15AG8GA1GA12AC16GA2GA8CT11AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT9AG1TG15GC7CG9AG13CT6CT2TA1CTTC10AC5AG2CA2GA28AC3AG4AC26AG28TA22CT2GA5TG15GACT28CA7TC8AG2GA2TC15AGACCT-N-N-N-N-N-N3GA5-N-N-N20AC30AG5AGTGTG1GC9CT4CT7CA1TC7AT3TC57AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N23TC14AG10GT6GA4AG1AGAG12CT3CT1CT7CT15TC24GATC1GA5GA6AT6TC4GT30GA5GA3-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9CA12ACGA2GATG1TG1ANTN-N-G-G10AG1TG2AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT9-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N16CG35CG4GT1AG45AG2CT9GA4-N-N-N21AG32CG1GT33TC2-N-N-N-N-N-N1CT14AT18GT5TCAC8GA5-N-N-N3AG12CA1AT1CT-N-N-N12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,197,1,182,10247,10443,1.48e-41,169,81.218,160,plus,7GT5TCAC8GA5-N-N-N3AG12CA1AT1-T-N-NCN12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,4508,1,4082,5,4512,0.0,4718,87.866,3961,plus,14-C-A-C1GNGNTN4GAACAG51-N5GA12-N-N9GA4-N-NCT5TA23TA7-N11TG9GT7GA1-N-N-N4TCGACA11AC16AG1AG10-N1GA5GT10AG10AGTA5AG52-N4AT1-N-N5TC7TA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N30-N7-N9GC79GA2-N21-N9-N16TC1-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33TC1CG12CTACAG44GA154AG27AG7GA25GC3GA14-N-N-N17GA27AC3AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N114-N-N-N8AG138TG4CT41GA63-N-N-N-N-N-N-N-N-N29CT18AC22GA8TC59TC72-N-N-N35GA17CG6TC31GA17AG14GT12-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N19AG20-G4-N-NGN1AT35TC29GA49-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N18CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16GC1-N-N-N-N-N-N30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG88-N-N-N17AG11AG12GA52CT128CT21TA31AG12CT86
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,333,1,318,10088,10420,5.99e-97,352,87.988,293,plus,14TCGAGC5GA1AG4-N-N-N52GA21GA3AGCT5TA7-N-N-N-N-N-N16TA18TG5GT3GA11-N-N-N3GACA11AC4-N-N-N12AG1AG17GT10AG10AGTA5AG28AG27
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,286,381,634,10644,10929,3.84e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N21-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N4TC22-N-N-N-N-N17-N-N-N45
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,91,4089,4178,494,584,3.71e-28,123,97.802,89,plus,7-N9GC73
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,5632,666,6007,1596,7224,0.0,5972,87.749,4942,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108-N-N-N-N-N-N-N-N-NCA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG30-N-N-N5GA5AG2TC11AG17AG8AG38GA2GA14AG27-N-N-N-N-N-N-N-N-N4CT4GAGA1AT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT1AC4CA35-N-N-NCACT6AG28TC5AG44GA18GA5CT3-N-N-N-N-N-N-N-N-N20-N6AG11TCCT4-N-N-N-N-N-N-N-N-N-N-N-N15CT4CT7CA4-N-N-N-N-N-N-N-N-N-N-N-NANGNANANANTNTNCNCNTNCNANGNANGNCNANGNANCNCN18ANGNCNCNCNCNTNCNCN17TC4-G-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A2AGGA11TC1-N-N-N-N-N-N13AC1AG2GA8GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA1-N-N-N13GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG6-N-N-N2AT2CA27AG22AG6AG8-N-N-N30-N-N-N17TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA21-N-N-N13CA31GA28TC38CT35AG63-N-N28TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC15-N-N-N-N-N-N1AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT37-N-N-N30AG5GT13GA-N-N-N-N-N-N-N-N-N-N-N-N26AT1AC53AG6TC9-N19AG10GAAT17CT5AGCACTAT3-N-N-N2AC2AT1AG1CT4AG3TC29AG5-N-N-N30AC10TC2-T-N-N17AGCA15AG2GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TGGA2AG2AG24-N-N2AC38GAGA3CG46GT5TC3CAAC43AN-N-N-N-N-N-C8TG3CA3AGGA18TC1CT5CT14AG8-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCACGA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT8GAGT28-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC1AGAGAT5AG5AC3GT22-N-N8CT5GA1ANTNCNANGNGNANANGN2TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC12-N-N-N-N-N-N21GA1GA5TA-N-N-N-N-N-N37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG6
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,3087,6046,8799,7335,10420,0.0,2303,77.227,2384,plus,3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG3CT2TC27-N-N-N6AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA15-N-N-N20AG8GA11AG11TC2CT9AG5-N-N-NAG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39-A-A-T-C-C-G3-C-C-AAG2TA1TG1GC11AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N2GACA1GA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN20CT3-A3A-2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG5AC12ACTCGA7AT42CTAT6GA19-T-T-T-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G-T-A-C-T-T-G-G3-AGC1TG2TG2-T-C2CA2GA2TCATAG1CA4CG1AG1AC1ACTA5AC5GA21-N-N-N4GT7GA28TC8GAACTA6-A-N-NGN2CT17AG2AGAC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNANANANTN5TC1CAACGA1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA5-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18AG1-G-N-NANGNGNAN1CGGATA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT7CT38GC3CA16AG6-N-N-N-N-N-N-N-N-N23AG12CT29AC28AG15GA5TG17CA56AG14AG10CT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA10-N-N-N-N-N-N9-N-N-N2AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G21GA2TA2AG2GNCN-N-A-T28GAAG1ANGNANANTNTNGNANTNCNCNANANGNGNCNCNTNGNCNTNGNCNANANGNGNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG17CA1GA4AG18TC8TC26TG2AG4TC41AG-N-N-N-N-N-N-N-N-N-N-N-N2AG2CT10GC33AG6TG1GA48TCGAGC5GA6-N-N-N5AT9TC5GA1TC14AC13GA3AG14AG13TA7-N-N-N-N-N-N16TA18TG5CTCA1AGGA4GAAG5-N-N-N3GA12AC1TA2-N-N-N3CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,737,46,669,1599,863,5.32e-174,609,80.190,591,minus,33TC8-N-N-N12TC68TG1GT16AT7AG3-A-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTN3GACTCTTG4TG15CT11CT17-N-N-N14CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T12-N-N-N-N-N3-N-N6-N-N-N-N24-N-N-N-N-N-N11
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,682,8482,9069,5,686,7.11e-135,479,77.859,531,plus,14-C-A-C1GNGNTN4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN6TA23TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG12-N1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N6TC16CT6-N7-N9GC21CT24GA35-N21-N9-N18-N19-N-N2-N6-N10
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,236,8863,9069,10645,10880,9.60e-50,196,86.017,203,plus,5-N10CN1-T-N6-N6-N9-N-N-N1GC10-N11CT2-N10-N12GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N16
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,1751,1,1746,455,2202,0.0,2186,93.946,1645,plus,254-A7GA1AG35GA4T-T-68GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG16TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA12CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG20AG44CT17TC47TC27TG99CG36GA23AG2GA30GATC36TC32CT11AG5CTAT7AG35GA20AG17AG8AG2CT26CT8GA9AG7AG30AG1GA14ACGA12AG24AG1CT9CT25TC24AG25GA9TC11CT24GT7AG12CT13GA8CT7AG26CA14TC5AT7CA5
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,301,550,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,9386,9635,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,180,1,180,9540,9719,2.04e-69,259,100.000,180,plus,180
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,9497,1,9493,151,9632,0.0,13151,98.473,9352,plus,13TG3GT7GA5TC56TG51GA129GC68TC84AG159AC359GC71CT3AG41GA79AG256YCWAYC2WA103AG146WA2AG38GA142TC72GT141TC52AG298TC8AG101AG125AG539AG65GA7GA4TC55GA2AG131GA13CT66TC25GA9AG38AG38CT11TC53TC50GA11CT1AG12GA6CA8AG263AG349AT21AG12AG313GA254ACAC26TC108GA105TC119AG229-T41AG5AG81CA45GA54CG3CA3AGGA18TC32TC11AC2-T-A-G49AG41GA69GA1GA51AG114GA215GAGA5CA3T-A-A-T-A-C-C-A-A-T-A-G-T-A-G-22GAAG6GA54AGAG24CT18GA30CA231TG16CT9AG33CAAC48TA99GACA225AC21TA17GA34CT61AG8GA207GC122AG68CT81AC3TC290AC4GA85AG143AG14GA38TC52AG146GA285GA25AG11TC47GA58AG11TG181GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,547,8947,9493,1,547,0.0,752,97.989,536,plus,23AC57GA37TC43TG3GT7GA5TC56TG51GA129GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,484,1,484,9236,9719,0.0,676,98.760,478,plus,17GA58AG11TG181GC68TC84AG59
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,4082,1,4082,1,4082,0.0,5487,97.036,3961,plus,14TCGAGC5GAACAG56GA21GA4CT5TA23TA18TG9GT7GA5TCGACA11AC16AG1AG11GA5GT10AG10AGTA5AG56AT6TC7TA7ATTG77GC79GA48TC103TC12AG148TC1CG12CTACAG44GA154AG27AG7GA25GC3GA31GA27AC3AG2GACT125AG138TG4CT41GA92CT18AC22GA8TC59TC107GA17CG6TC31GA17AG14GT46AG20AG2GA2AT35TC29GA88CT22CT49TC5AT16GC41GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG105AG11AG12GA52CT128CT21TA31AG12CT86
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,634,1,634,9086,9719,0.0,813,94.795,601,plus,14TCGAGC5GA1AG56GA21GA3AGCT5TA23TA18TG5GT3GA14GACA11AC16AG1AG17GT10AG10AGTA5AG28AG27AT6TC7TA7ATTG77GC79GA48TC84
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,403,494,2.15e-30,131,98.913,91,plus,18GC73
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,9488,9579,2.15e-30,131,98.913,91,plus,18GC73
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,8446,666,9069,1323,9673,0.0,9611,90.161,7615,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108CA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG35GA5AG2TC11AG17AG8AG38GA2GA14AG31CT4GAGA1AT4CT1AC4CA35CACT6AG28TC5AG44GA18GA5CT29AG11TCCT19C-T-2C-C-T-C-A-G-A-G-C-C-G-A-C-C-A-G-A-A-A-3CT28C-C-A-G-C-C-C-C-T-19TC5AT2-A-G-A11TC14AC1AG2GA8GA5T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA14GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG8AT2CA27AG22AG6AG55TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA34CA31GA28TC38CT35AG91TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC16AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT67AG5GT13GA26AT1AC53AG6TC28AG10GAAT17CT5AGCACTAT5AC2AT1AG1CT4AG3TC29AG35AC10TC2-T17AGCA15AG2GATC2TGGA2AG2AG26AC38GAGA3CG46GT5TC3CAAC43AC8TG3CA3AGGA18TC1CT5CT14AG9TC4TC2TA2GCACGA3TG26GACT22AT8GAGT39TC1AGAGAT5AG5AC3GT30CT5G-G-A-T-C-A-G-G-A-4TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC33GA1GA5TA37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG9G-T-A-G-G-2ATTA1AC2CT1AGATTACG1CAAG1TG1AG1-G1CA1AG2A-C-3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3AC2TC4CAAG4TC2AG3CT2TC33AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA35AG8GA11AG11TC2CT9AG5AG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39TA2ACAC2GA1-C-C2-A-G-A-G-G-A-C11AT2TGAT1GA3CT3GACA1G-A-T-7GA4AG20CT3G-3-G2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA19TG5AC12ACTCGA7AT42CTAT6GA19ATGT1GATA2AG1-A-C-T-T3-G-T3-G-A2-G-G-T2TA1-T3-A-C-T-G-A-A4CG1AG1AC1ACTA5AC5GA25GT7GA28TC8GAACTA6GA2CT17AG2AGAC21C-A-A-3AGTC1G-T-3G-1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA32AG1AG3GAC-G-T-8AT7CT38GC3CA16AG29AG12CT29AC28AG15GA5TG17CA56AG14AG10CT9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA21AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG12GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT5AT4AG21GA2TA2AG2GACT28G-A-A-2A-A-T-T-G-A-T-C-C-A-A-G-G-C-C-T-G-C-T-G-C-A-A-G-G-A-G-G-G-A-2AG17CA1GA4AG18TC8TC26TG2AG4TC41AG2AG2CT10GC33AG6TG1GA48TCGAGC5GA11AT9TC5GA1TC14AC13GA3AG14AG13TA23TA18TG5CTCA1AGGA4GAAG8GA12AC1TA5CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,627,46,669,1326,700,0.0,792,94.258,591,minus,33TC20TC68TG1GT16AT7AG3GATC3GACTCTTG4TG15CT11CT31CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT53AT1-T-T-T55
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,588,8482,9069,1,588,0.0,673,89.966,529,plus,14TCGAGC5GAAC10AT9TC5GA1TC14AC13GA3AG14AG6GA6TA23TA18TG5CGCA1AGGT4GAAG1GA5TCGA12AC1TA5CT8AG13GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
diff --git a/tests/expected-results-small-csv/errors.csv b/tests/expected-results-small-csv/errors.csv
index 3635e7b..7c4602c 100644
--- a/tests/expected-results-small-csv/errors.csv
+++ b/tests/expected-results-small-csv/errors.csv
@@ -11,8 +11,10 @@ KX505501.1,DeletionInOrf,"Smaller ORF rev_exon2 at 8377-8653 can have maximum de
 KX505501.1,InternalStopInOrf,Smaller ORF nef at 8796-9417 contains an internal stop codon at 8832
 KX505501.1,RevResponseElementDeletion,Query Sequence exceeds maximum deletion tolerance in RRE. Contains 265 deletions with max tolerance of 20 deletions.
 KX505501.1,LongDeletion,Query sequence contains a long deletion.
-MN691959,InternalStopInOrf,Smaller ORF vpu at 5625-5871 contains an internal stop codon at 5688
-MN691959,InternalStopInOrf,Smaller ORF tat_exon2 at 7937-8030 contains an internal stop codon at 7982
+KX505501.1,Scramble,Sequence is plus-scrambled.
+MN691959,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
+MN691959,InternalStopInOrf,Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6124
+MN691959,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
 MN692074,DeletionInOrf,"ORF pol at 2084-5096 can have maximum deletions 30, got 981"
 MN692074,InternalStopInOrf,ORF env at 6224-8795 contains an internal stop codon at 6551
 MN692074,DeletionInOrf,"Smaller ORF vif at 5040-5619 can have maximum deletions 30, got 81"
@@ -26,11 +28,10 @@ MN692074,RevResponseElementDeletion,Query Sequence exceeds maximum deletion tole
 MN692074,LongDeletion,Query sequence contains a long deletion.
 MN692145,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN692145,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-MN692145,Scramble,Sequence is plus-scrambled.
 MN090335,InternalStopInOrf,ORF gag at 789-2292 contains an internal stop codon at 822
 MN090335,FrameshiftInOrf,Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions.
 MN090335,InsertionInOrf,"Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 282"
 MN090335,PackagingSignalDeletion,Query Sequence exceeds maximum deletion tolerance in PSI. Contains 42 deletions with max tolerance of 10 deletions.
 MN090335,MajorSpliceDonorSiteMutated,"Query sequence has a mutated splice donor site, AT."
-MN090335,Scramble,Sequence is plus-scrambled.
+MN090335,Scramble,Sequence is minus-scrambled.
 MN090335,InternalInversion,Sequence contains an internal inversion.
diff --git a/tests/expected-results-small-csv/orfs.csv b/tests/expected-results-small-csv/orfs.csv
index cd4607e..9ab9398 100644
--- a/tests/expected-results-small-csv/orfs.csv
+++ b/tests/expected-results-small-csv/orfs.csv
@@ -10,17 +10,17 @@ KX505501.1,rev_exon2,1747,1927,forward,1.9802197802197803,DASGVLQGLLTLSFSQGTFRWG
 KX505501.1,vpr,1748,1751,forward,2.1884615384615382,M,M
 KX505501.1,tat_exon1,1748,1751,forward,2.1875,M,M
 KX505501.1,rev_exon1,1748,1751,forward,2.1653846153846152,M,M
-MN691959,gag,639,2148,forward,0.3007843137254913,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*R*
-MN691959,pol,1934,4946,forward,0.1750246791707799,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
-MN691959,vif,4890,5469,forward,0.34375,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*
-MN691959,vpr,5408,5699,forward,0.375,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*
-MN691959,tat_exon1,5679,5895,forward,0.2777777777777777,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ
-MN691959,rev_exon1,5818,5896,forward,0.46153846153846145,MAGRSGDSDEDLLKTVRLIKFLYQSS,MAGRSGDSDEDLLKTVRLIKFLYQSS
-MN691959,vpu,5910,6156,forward,1.809876543209876,MQPIQIAIVALVVAIIIAIVV,MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*
-MN691959,env,6070,8656,forward,0.4873684210526319,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*
-MN691959,tat_exon2,8237,8333,forward,1.243333333333333,RPTSQTRGDPTGPKE,RPTSQTRGDPTGPKE*KKKVERETETDPFD**
-MN691959,rev_exon2,8238,8514,forward,0.4945054945054945,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*
-MN691959,nef,8657,9278,forward,0.5230392156862744,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*
+MN691959,gag,639,2142,forward,0.05400000000000005,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ,MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*
+MN691959,pol,1934,4946,forward,0.03589232303090717,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED,FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*
+MN691959,vif,4890,5469,forward,0.0625,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH,MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*
+MN691959,vpr,5408,5702,forward,0.21153846153845945,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS,MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*T
+MN691959,tat_exon1,5679,5895,forward,0.29166666666666674,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ,MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ
+MN691959,rev_exon1,5818,5896,forward,0.5769230769230769,MAGRSGDSDEDLLKTVRLIKFLYQSS,MAGRSGDSDEDLLKTVRLIKFLYQSS
+MN691959,vpu,5910,6156,forward,0.7060975609756097,SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL,MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*
+MN691959,env,6070,8683,forward,0.0867990654205606,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL,MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*DGWQVVKK*
+MN691959,tat_exon2,8237,8333,forward,0.19999999999999996,RPTSQTRGDPTGPKE,RPTSQTRGDPTGPKE*KKKVERETETDPFD**
+MN691959,rev_exon2,8238,8514,forward,0.16483516483516492,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE,DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*
+MN691959,nef,8657,9278,forward,0.16991869918698432,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC,MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*
 MN692074,env,2,4115,forward,1.9582943925233647,MNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI,EGLIWSQKRQDILDLWIYHTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPEKVEEANAGENNSLLHPISLHGMEDPEKEVLMWKFDSRLAFHHMARELHPEYYKNC*LRAIYKGLSAGDFPGRRGLGGTGEWRALRCCI*AAAFCLYWVSLVRPDLSLGALWLAREPTA*ASIKLALSALSSVCPSVV*LW*LEIPQTLLVSVENL*QWRPNRDLKAKEKPEELSRRRTRLAEARTARGEGRRLVSTPKILTSGG*KERDGCESVSIKCGRIRQMGKNSVKARGKEKI*IKTYSMGKQGARTIRS*SWPVRNIRRL*TNTGTATTIPSDRIRRT*III*YNSNPLLCASKDRGKRHQGSFREGRGRAKQK*EKGTASSS*HRKQQPGQPKLPYSAEHPGANGTSGHIT*NFKCMGKSSRREGFQPRSNTHVFSIIRRSHPTRFKHHAKHSGGTSSSHANVKRDHQ*GSCRMG*IAPSACRAYCTRPDERAKGK*HSRNY*YPSGTNRMDDK*STYPSRRNL*KMDNHGIK*NSKDV*SYQHSGHKTRTKGTL*RLCRSVL*NSKSRASFTGGKKLDDRNLVGPKCEPRL*DYFESIGTSRYIRRNDDSMSGSGRTRP*SKSFGGSNEPSNKFSYHNDAERQF*EPKKEC*VFQLWQRRAHSQKLQGP*EKGLLEMWKGRTPNERLY*ETG*FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI*
 MN692074,gag,789,2292,forward,0.13880000000000003,MGARASVLSAGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIATLYCVHQKIEVKDTKEALEKVEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIIMGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQKGNFRNQKRNVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPAQKQEPIDKELYPLASLRSLFGNDPSSQ,MGARASVLSAGELDKWEKIRLRPGGKKKYRLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIATLYCVHQKIEVKDTKEALEKVEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIIMGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQKGNFRNQKRNVKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPAQKQEPIDKELYPLASLRSLFGNDPSSQ*
 MN692074,pol,2084,4115,forward,0.7912263210369039,FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI,FFREDLAFPQGKAREFPSEQTRANSPTRRELQVWGRDNNSRSEAGADRQGTVSFSFPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDTQWRALRCCI*
diff --git a/tests/expected-results-small/blast.csv b/tests/expected-results-small/blast.csv
index 8fb23a2..530b4f1 100644
--- a/tests/expected-results-small/blast.csv
+++ b/tests/expected-results-small/blast.csv
@@ -1,21 +1,18 @@
 qseqid,sseqid,sgi,qlen,slen,length,qstart,qend,sstart,send,evalue,bitscore,pident,nident,sstrand,btop
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,1938,1,1691,545,2481,0.0,1676,82.147,1592,plus,49-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N13-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N16-A-N-N-N-N-N-N6GA1AG15-N-N-N-N6-N-N3-N-N-N-N-N11GA3-N-N-N-N-N-NANTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N45GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG9-N-N-N7TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N8CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG12-N-N-N8AG44CT17TC47TC27TG99CG10-N-N-N-N-N-N-N-N-N26GA23AG2GA30GATC36TC32CT11AG5CTAT7AG30-N-N-N5GA20AG17AG8AG2CT26CT8GA9AG7AG27-N-N-N-N-N-N-N-N-N3AG1GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N5ACGA12AG24AG-N-N-N1CT9CT25TC24AG25GA9TC11CT6-N-N-N-N-N-N-N-N-N18GT1-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N9GA8CT7AG6
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,196,1809,1997,448,643,3.77e-58,222,92.347,181,plus,12GNTNAN2-G-A26-N7-N9GC21CT9GTAG46GA2-N21-N9-N17
-KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,11027,200,2,180,10730,10929,2.85e-51,199,89.500,179,plus,21-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,9890,329,9278,569,10443,0.0,9284,83.893,8297,plus,11TC10AG2-NAG20-N9-N16CT1-N19-N-N-T1TNGA1AG3-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4CT4AN1-NCNGN4GTGA3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NCA12-N-N14-G-A-A-G-A-A9AG17-N-N-N-NAC5-N-N3-N-N-N-N-N11-T5-N-N-N-N-N-N-N11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N49CA39AG33GA32GT5AG42TG27GA8AT31CGAC10AG25GA2GA11GA3-N-N-N15-C-G-G-G-C-A-C-A-GAC15CA7AG5CA1CA1GA5AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAG7AG20CTAC4GA6GA64TC6-N-N-N147GT16AC93-N-N-N-N-N-N-N-N-N7YCWAYC2WA16TA5AG67GA12AG23CT15CT7CT8TC8GA30-N-N-N9GT16GA23WA26AC14GA2AG14GA2AG14AG9-N-N-N-N-N-N-N-N-N10AG1TG2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGC2AG23TCTA3GA10AG1-N-N-N1TC60GN22GN4GN19GT6-N-N-N-N-N-N-N-N-NGN12AN6-N9CT9TC4-N-N-N-N-N-N-N-N-N-N-N-N3AG44-T-T-C-N-N-N-T-C-A-G-A-G-C-A-G-A-C-C-A-G-A-G-C-C-A-A-C-A-G-C-C-C-C3-N-N-N-N-N-N-N-N-N17CT5-A-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTN18-N-N-N-N-N-N5AG9GA1TC12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AG9GA14AG6CA1CA23AG20TC33AGGA87CTTA11GA65AC4TC17CT59TC57AC13GA42GA25TC83TC2CT2AG35TC33GA39TC33CT71TC74AG16AG6GA2GA2GA9CT4GA1GA7CT2AGCA30TC75ACGN4AN32TN22CT44CT1GA4TC8GA2AG12AC18GA11GA2AG39TA34GA56GA2AG7GA1AGCT15TA39AG1CT8TC18-N-N-N7GA7CT13GA12AG13AG50TC26GA2AG47CT5GA5AG14GA9AG3AG3AG8GA3GA5CA3CATGAG35TC13GA5GA3TC62CA1AG19AG39TC11AG47CT3GA14AG32-N-N-N2TA69-N-N-N17CT3GA8-N-N-N56AG27GA70GA11TC5TC32AC18ACGC8CT4GA2AG1GA26AG17AC80TG14TC26CT34GA3CT18GA43AG3-N-N-N74CT56GA17GA63-N-N28CT11GATGTG13GAGAGAGA27AT11AG15TC16TG-N-N-N-N-N-N4GA3GA78AG12GC18AC21CG7CT5CT11CA14GT3TA9AG1AT38-N-N-N8AG8AG16CT16-N-N-N-N-N-N-N-N-N-N-N-N28CGAG31AG20GA6CT6AC2-N14TC7GA7AG25AGTGTA3-N-N-N14GA39-N-N-N9AC31CT3-N-N-N11GA4GA16GA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG2AGGAAGAG5CT3AG15TN-N-C41AG10CA2CA44TCGA1CG5CG37-N-N-N-N-N-N9CA7AG20TA3CT17GA2CT5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N6CT2AT2-A2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-T1AG26AGTC21AGTA1CT5AGAT29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11CT15CA3TG22-N-N5GA8-G-G-A-T-C-A-G-G-A4GT1GA5AT13GNGNGNTNGNGNANGNANTNGNGN4CT13-N-N-N-N-N-N1TCAG26AT-N-N-N-N-N-N38GA17AC29TAGA49CT12GC7GA1TA21CT12GA25TC18CG10GA8AG22GC6GT9T-T-G-1GCGC3GACT4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG1AT6GA2GT2AC1AG-G-T-T6GA2GA3CTGAGA-T-T-T4ACTA4A-T-G-G-A-1AC2G-4GA4AGAT19GC5GC5GA7GATGGA4AG5AT4TC1CG2TGTAAG32CG1ATCACT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT4CT5CT2GA6CT27-N-N-N12GC1GA21GA32AG6CA3CT8AG10CA16-N-N-N26AG2AG5TC3CT1GA30-N-N-N15GACACA15GA1TC23CGCG52CA1GA3CACNANGNANGNAN18GTTA1AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N3AG5-A-T-A3AG4GA-N-N-N-N-N-N-N-N-N-N-N-N18AC21CA9AC7CT1AG1CA12CTAT2TA1GAGAAG3ANANTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9AG7GTCTAC15CT13CT16GA23TA7AG18TNTNTNANANTNANGNTNANCNTN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-A2-T2GA1AG2GAACAT3TACAATAGAG2ACCT2TA3GCGC2GA1GAAGCT2AT2CA24TA5-N-N-N4TGGA38CTAGGCCA11AC-N-N-N11TC2TC20AG9AGAG1AN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-G-G-T-G1CG6GA1GCTA10CT23GA47AG5AG27-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18GA1GAGNGNANAN-N-N-A-C-G-C5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TA53AG20-N-N-N-N-N-N-N-N-N23GA5GA39TC22CT2AG15AG8GA1GA12AC16GA2GA8CT11AG15GA26-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N14AT9AG1TG15GC7CG9AG13CT6CT2TA1CTTC10AC5AG2CA2GA28AC3AG4AC26AG28TA22CT2GA5TG15GACT28CA7TC8AG2GA2TC15AGACCT-N-N-N-N-N-N3GA5-N-N-N20AC30AG5AGTGTG1GC9CT4CT7CA1TC7AT3TC57AGCT25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N23TC14AG10GT6GA4AG1AGAG12CT3CT1CT7CT15TC24GATC1GA5GA6AT6TC4GT30GA5GA3-N-N-N-N-N-N-N-N-N-N-N-N2GA6-N-N9CA12ACGA2GATG1TG1ANTN-N-G-G10AG1TG2AG12ACGA1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N20TC9GC3CT10CT33C-A-G-C-A-G-3CACT9-N-N-N-N-N-N4CT27GA-N-N-N-N-N-N-N-N-N-N-N-N16CG35CG4GT1AG45AG2CT9GA4-N-N-N21AG32CG1GT33TC2-N-N-N-N-N-N1CT14AT18GT5TCAC8GA5-N-N-N3AG12CA1AT1CT-N-N-N12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN691959,Ref.B.NL.00.671_00T36.AY423387,0,9493,11027,197,1,182,10247,10443,1.48e-41,169,81.218,160,plus,7GT5TCAC8GA5-N-N-N3AG12CA1AT1-T-N-NCN12GA6TAGA5AG2GA8TG4GA6GA4AT5GA28GA11CA1GA13TA1-N-N-N-N-N-N-N-N-N12
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,4508,1,4082,5,4512,0.0,4718,87.866,3961,plus,14-C-A-C1GNGNTN4GAACAG51-N5GA12-N-N9GA4-N-NCT5TA23TA7-N11TG9GT7GA1-N-N-N4TCGACA11AC16AG1AG10-N1GA5GT10AG10AGTA5AG52-N4AT1-N-N5TC7TA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N30-N7-N9GC79GA2-N21-N9-N16TC1-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-N13-N-N17-N-N-N-N-N-N24-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-N-N-N-N-N12-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N33TC1CG12CTACAG44GA154AG27AG7GA25GC3GA14-N-N-N17GA27AC3AG2GACT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N114-N-N-N8AG138TG4CT41GA63-N-N-N-N-N-N-N-N-N29CT18AC22GA8TC59TC72-N-N-N35GA17CG6TC31GA17AG14GT12-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N19AG20-G4-N-NGN1AT35TC29GA49-N-N-N-N-N-N-N-N-N20-N19CT4-N-N-N-N-N-N-N-N-N-N-N-N18CT14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16GC1-N-N-N-N-N-N30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG88-N-N-N17AG11AG12GA52CT128CT21TA31AG12CT86
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,333,1,318,10088,10420,5.99e-97,352,87.988,293,plus,14TCGAGC5GA1AG4-N-N-N52GA21GA3AGCT5TA7-N-N-N-N-N-N16TA18TG5GT3GA11-N-N-N3GACA11AC4-N-N-N12AG1AG17GT10AG10AGTA5AG28AG27
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,286,381,634,10644,10929,3.84e-68,256,87.762,251,plus,6-N10-N2-N6-N6-N9-N-N-N1GC10-N14-N10-N21-N7-N-N14-N-N-N-N-N3GA8-N10-N7-N6-N13-N4TC22-N-N-N-N-N17-N-N-N45
-MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,11027,91,4089,4178,494,584,3.71e-28,123,97.802,89,plus,7-N9GC73
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,7214,1,6614,5,7215,0.0,7463,87.316,6299,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N-T1TN6-N12-N18-N-N-N7-N6-N14-N-N14-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N4TC4-N8AG4-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9-N-N-NAC12-N-N17-N-N-N-N-N-N8AG15-N-N-N-N6-N-N3-N-N-N-N-N15-N-N-N-NANTNTNTNTA11-N-N-N12-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N40AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC18-N-N-N5GA6GA8AC1AG21AC7CT3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N30CA1TC5CG11CT42AG20-N-N-N8AG62TC41AG107CT36-N-N-N-N-N-N-N-N-N29CT41GA8TC17TC17AG3TC10TC17CT14TC8CT39-N-N-N9TG1AG20CT19GCAG38GA17AG8CT18-N-N-N-N-N-N-N-N-N15-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N34GA6GA3-N-N-N29GA5TC1TC79-N-N-N-N-N-N-N-N-N2AG17-N6AG12CT4-N-N-N-N-N-N-N-N-N-N-N-N3GA8AG5CT11GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18-N-N-N-N-N-N-N-N-N17TC5-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN16TC1-N-N-N-N-N-N13TC3CT2GA9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA24-N-N-N13GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG36-N-N-N2AT14CT47GA6-N-N-N1GA28-N-N-N56GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC102-N-N-N45GA28TC26GA8CT34TC3AG63-N-N56AG32AC27TCGA14-N-N-N-N-N-N50TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG24-N-N-N17GA9TC23-N-N-N-N-N-N-N-N-N-N-N-N1GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT4-N58GT3-N-N-N29CA18AG5-N-N-N38CT2TC2-T-N-N6GA10AG16AG3TC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CA9AG15AG4-N-N33CT8GA12TACA30TC5CT8GA45-N-N-N-N-N-N12TCCA3AGGA18TC31-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC1AC1CATC2TA3AC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TGCT13AT17CA19TC6TA29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC15AC3GT22-N-N14GA1ANTNCNANGNGNANANGN2CA5AG2-C-T-T-G-T1CG1CGTA1AG-G-G-G-G27-N-N-N-N-N-N21GA3GACA2TA-N-N-N-N-N-N38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,3136,6626,9387,7308,10443,0.0,2544,79.688,2499,plus,8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3ACGT2-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NTNANANTNGNGNTNANANTNTNANTNTNCNTN7GA5TC9TC27-N-N-N2AG5AC22TA15GT1AT12GA6GA4AGCAACAG39-N-N-N2GA50TC18-N-N-N16CT43CAAC14CA13GAGATC10-G-A-ATA4-A-T-CGC1GTGA1TC2CG1TGGA10AGGA6TGAT1GA2-A-T-A-N-N-N-N-N-N-N-N-N-N-N-N3GACA4ANCNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA3-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N10AT5CATG3CT28AG39AT5AC20-T-T-T3-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNCNANANCAAGCT2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A33-N-N-N12GA34AT12-N-N-N8CA12TC23-N-N-N-N-N-N-N-N-N-N-N-NANANGNANCNTNANANCNGA1GT7-ACTCG1-G-T10TC23AG40GA15GA24-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21-N-N-N-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3CT44AG1GC2GA3GA2TC17-N-N-N-N-N-N-N-N-N23AG20AG17AG3TC23GA20GA8CG35TA36AC25-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA2-N-N-N-N-N-N9-N-N-N20CA36GACT2CG9AC4TC3AG13TA6AG50ATAG29-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N13TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N9-N-N6GT21TG2GN-N-N-A12AC19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N21GA12TC10TC6GA21TC9AG3AC8AC22AG11-N-N-N-N-N-N-N-N-N-N-N-N118AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,734,9074,9689,5,738,9.18e-154,542,79.428,583,plus,18-N-N-N5ACAG12TC8AG29-N5GA12-N-N13-A-NGN30TA7-N13-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G-N-N-N3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8-T1GN1GA5AT9GA34GA36-N4AT1-N-N19-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-NGN21GA1AT6-N7-N9GC18-T2CT56GA3-N21-N9-N18-N19-N-N2-N6-N12-N18-N-N-N7-N6-N13
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,356,1,314,10088,10443,4.12e-84,311,82.584,294,plus,24AG4-N-N-N8TC8AG34GA40-N-N-N-N-N-N16TA21CAAGCA1-A-A2CT3-A3-G-C-C-N-N-N3-A-A-A-G2CG3-A-C-A-C-C-A-G-C-N-N-N3CT1GA7CTAG8GT8AT9GA34GA12AG27AT1-N-N-N-N-N-N-N-N-N12
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,364,616,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,11027,286,9437,9689,10644,10929,2.47e-64,245,86.364,247,plus,6-N9-A-NGCCTAN6-N6-N9-N-N-N1GC10-N8-T2CT2-N10-N21-N7-N-N14-N-N-N-N-N2GA9-N10-N7-N6-N13-N27-N-N-N-N-N17-N-N-N45
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,5632,666,6007,1596,7224,0.0,5972,87.749,4942,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108-N-N-N-N-N-N-N-N-NCA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG30-N-N-N5GA5AG2TC11AG17AG8AG38GA2GA14AG27-N-N-N-N-N-N-N-N-N4CT4GAGA1AT2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2CT1AC4CA35-N-N-NCACT6AG28TC5AG44GA18GA5CT3-N-N-N-N-N-N-N-N-N20-N6AG11TCCT4-N-N-N-N-N-N-N-N-N-N-N-N15CT4CT7CA4-N-N-N-N-N-N-N-N-N-N-N-NANGNANANANTNTNCNCNTNCNANGNANGNCNANGNANCNCN18ANGNCNCNCNCNTNCNCN17TC4-G-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A2AGGA11TC1-N-N-N-N-N-N13AC1AG2GA8GA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA1-N-N-N13GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG6-N-N-N2AT2CA27AG22AG6AG8-N-N-N30-N-N-N17TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA21-N-N-N13CA31GA28TC38CT35AG63-N-N28TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC15-N-N-N-N-N-N1AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT37-N-N-N30AG5GT13GA-N-N-N-N-N-N-N-N-N-N-N-N26AT1AC53AG6TC9-N19AG10GAAT17CT5AGCACTAT3-N-N-N2AC2AT1AG1CT4AG3TC29AG5-N-N-N30AC10TC2-T-N-N17AGCA15AG2GATC1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TGGA2AG2AG24-N-N2AC38GAGA3CG46GT5TC3CAAC43AN-N-N-N-N-N-C8TG3CA3AGGA18TC1CT5CT14AG8-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1TC4TC2TA2GCACGA-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3TG26GACT22AT8GAGT28-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11TC1AGAGAT5AG5AC3GT22-N-N8CT5GA1ANTNCNANGNGNANANGN2TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC12-N-N-N-N-N-N21GA1GA5TA-N-N-N-N-N-N37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG6
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,3087,6046,8799,7335,10420,0.0,2303,77.227,2384,plus,3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NAN2TC4CAAG4TC2AG3CT2TC27-N-N-N6AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA15-N-N-N20AG8GA11AG11TC2CT9AG5-N-N-NAG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39-A-A-T-C-C-G3-C-C-AAG2TA1TG1GC11AT2TGAT1GA3CT1-N-N-N-N-N-N-N-N-N-N-N-N2GACA1GA3ANTNAN3GA4-G-N-N-N-N-N-N-N-N-N-N-NAN20CT3-A3A-2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA2-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N17TG5AC12ACTCGA7AT42CTAT6GA19-T-T-T-A-A-T-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-A-G-T-A-C-T-T-G-G3-AGC1TG2TG2-T-C2CA2GA2TCATAG1CA4CG1AG1AC1ACTA5AC5GA21-N-N-N4GT7GA28TC8GAACTA6-A-N-NGN2CT17AG2AGAC20-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NANCNANANANTN5TC1CAACGA1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA5-N-N-N9-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N18AG1-G-N-NANGNGNAN1CGGATA5-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N3AT7CT38GC3CA16AG6-N-N-N-N-N-N-N-N-N23AG12CT29AC28AG15GA5TG17CA56AG14AG10CT-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA10-N-N-N-N-N-N9-N-N-N2AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG1-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N11GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT1-N-N-N-N-N-N-N-N-N-N-N-N4AT4AN-N-G21GA2TA2AG2GNCN-N-A-T28GAAG1ANGNANANTNTNGNANTNCNCNANANGNGNCNCNTNGNCNTNGNCNANANGNGNANGNGNGNANAN-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N1AG17CA1GA4AG18TC8TC26TG2AG4TC41AG-N-N-N-N-N-N-N-N-N-N-N-N2AG2CT10GC33AG6TG1GA48TCGAGC5GA6-N-N-N5AT9TC5GA1TC14AC13GA3AG14AG13TA7-N-N-N-N-N-N16TA18TG5CTCA1AGGA4GAAG5-N-N-N3GA12AC1TA2-N-N-N3CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,737,46,669,1599,863,5.32e-174,609,80.190,591,minus,33TC8-N-N-N12TC68TG1GT16AT7AG3-A-C-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-NGNTN3GACTCTTG4TG15CT11CT17-N-N-N14CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT30-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N11AT-N-N-N-N-N-N-N-N-T-T-T12-N-N-N-N-N3-N-N6-N-N-N-N24-N-N-N-N-N-N11
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,682,8482,9069,5,686,7.11e-135,479,77.859,531,plus,14-C-A-C1GNGNTN4GAAC10AT9TC5GA1TC14AC8-N5GA3AG8-N-N6AG6-A-NGN6TA23TA7-N11TG5CGCA1AGGT4-A4-N-NGN4TCGA12AC1TA5CT8AG12-N1GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG9-N4AT1-N-N2AGGA10CTTC3-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N2ATTG9-N10-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N-N12-N-N-N6TC16CT6-N7-N9GC21CT24GA35-N21-N9-N18-N19-N-N2-N6-N10
-MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,11027,236,8863,9069,10645,10880,9.60e-50,196,86.017,203,plus,5-N10CN1-T-N6-N6-N9-N-N-N1GC10-N11CT2-N10-N12GA8-N7-N-N14-N-N-N-N-N12-N10-N7-N6-N13-N27-N-N-N-N-N16
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,1751,1,1746,455,2202,0.0,2186,93.946,1645,plus,254-A7GA1AG35GA4T-T-68GA3AC17CT10AG5TG4GA7CT25AG33CT46GAAT1TC3AC21AGGA2TA2GA9AG5GATC12AG7AGAG5TGGA1GA17CT14AG16TG2GA4CA11AG1CA7-A-C-A5ACGATC4GA12CA9GA10T-3-C15TC8CA1GA5AT27AG4GA2AG20AG44CT17TC47TC27TG99CG36GA23AG2GA30GATC36TC32CT11AG5CTAT7AG35GA20AG17AG8AG2CT26CT8GA9AG7AG30AG1GA14ACGA12AG24AG1CT9CT25TC24AG25GA9TC11CT24GT7AG12CT13GA8CT7AG26CA14TC5AT7CA5
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,301,550,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,251,1747,1997,9386,9635,2.53e-85,312,93.625,235,plus,2AC15AT4GA10CTTC6TGTCCT30T-AG1GA42GC21CT9GTAG46GA49
+KX505501.1,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,1997,9719,180,1,180,9540,9719,2.04e-69,259,100.000,180,plus,180
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,9497,1,9493,151,9632,0.0,13151,98.473,9352,plus,13TG3GT7GA5TC56TG51GA129GC68TC84AG159AC359GC71CT3AG41GA79AG256YCWAYC2WA103AG146WA2AG38GA142TC72GT141TC52AG298TC8AG101AG125AG539AG65GA7GA4TC55GA2AG131GA13CT66TC25GA9AG38AG38CT11TC53TC50GA11CT1AG12GA6CA8AG263AG349AT21AG12AG313GA254ACAC26TC108GA105TC119AG229-T41AG5AG81CA45GA54CG3CA3AGGA18TC32TC11AC2-T-A-G49AG41GA69GA1GA51AG114GA215GAGA5CA3T-A-A-T-A-C-C-A-A-T-A-G-T-A-G-22GAAG6GA54AGAG24CT18GA30CA231TG16CT9AG33CAAC48TA99GACA225AC21TA17GA34CT61AG8GA207GC122AG68CT81AC3TC290AC4GA85AG143AG14GA38TC52AG146GA285GA25AG11TC47GA58AG11TG181GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,547,8947,9493,1,547,0.0,752,97.989,536,plus,23AC57GA37TC43TG3GT7GA5TC56TG51GA129GC68TC57
+MN691959,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9493,9719,484,1,484,9236,9719,0.0,676,98.760,478,plus,17GA58AG11TG181GC68TC84AG59
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,4082,1,4082,1,4082,0.0,5487,97.036,3961,plus,14TCGAGC5GAACAG56GA21GA4CT5TA23TA18TG9GT7GA5TCGACA11AC16AG1AG11GA5GT10AG10AGTA5AG56AT6TC7TA7ATTG77GC79GA48TC103TC12AG148TC1CG12CTACAG44GA154AG27AG7GA25GC3GA31GA27AC3AG2GACT125AG138TG4CT41GA92CT18AC22GA8TC59TC107GA17CG6TC31GA17AG14GT46AG20AG2GA2AT35TC29GA88CT22CT49TC5AT16GC41GA10AG33GA68AG195TC8AG101AG181GA33GT27AG4AC2TC5AG20CT4GT96TC29AC29AG14TC22TC12AG20AG6TC34CT110AG65GA21AG2GA11AG13GA17GA2AG26AG53TC61AG105AG11AG12GA52CT128CT21TA31AG12CT86
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,634,1,634,9086,9719,0.0,813,94.795,601,plus,14TCGAGC5GA1AG56GA21GA3AGCT5TA23TA18TG5GT3GA14GACA11AC16AG1AG17GT10AG10AGTA5AG28AG27AT6TC7TA7ATTG77GC79GA48TC84
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,403,494,2.15e-30,131,98.913,91,plus,18GC73
+MN692074,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,4178,9719,92,4087,4178,9488,9579,2.15e-30,131,98.913,91,plus,18GC73
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,9753,1,9689,1,9719,0.0,11990,93.264,9096,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA153TC12AG13AC37AG40T-T-T-T-63AG9AG6GA36CA27AG3AG11TC27AT7AC32TC25AG51TGGA19AT5TC23GA6GA8AC1AG21AC7CT33CA1TC5CG11CT42AG28AG62TC41AG107CT65CT41GA8TC17TC17AG3TC10TC17CT14TC8CT48TG1AG20CT19GCAG38GA17AG8CT67GA6GA32GA5TC1TC81AG23AG12CT7GA8AG5CT11GA37TC5AT16TC14TC3CT2GA12T-C-C-7GA10AG106AG47TC24TCCT30GT56AG8TC11CT8TC8AG84AGCT15AG65TC17CT41AG11TC20GA11AC74GA2TC114TA127AGTC26TC109AC23AG11TG26TCGC7CT7AGAG14TC5GA3GA64GA6TC91GA48GA56GA4TA37GAGATC1AG11AG65CT65TC18TG4TC2AG33GA1CT11GA9TA44CT19AG66AC34AG11CA14CTTC58TC3AG7TC2AG38AT14CT47GA7GA84GA95AG14CT5CT41AT11TC8TCAG2AG4AG4AG21GA11GA5CA80CT17AG26TC147GA28TC26GA8CT34TC3AG119AG32AC27TCGA64TC40GA24CTAG1CA14GA20TC11AC13GATG3AT10TC8TC5TG41GA9TC24GA2GT6CA15GA1AG2GA45CA10TC1TCCA1GT62GT32CA18AG43CT2TC2-T6GA10AG16AG3TC3CA9AG15AG37CT8GA12TACA30TC5CT8GA57TCCA3AGGA18TC32TC1AC1CATC2TA3AC4TGCT13AT17CA19TC6TA40TC15AC3GT36GA2TACAATGAGTAC2AC3A-1CGATAGCG2CAATCGTGTGAG-G48GA3GACA2TA38AG46GA66GAAGGT5AT21TC7GA4CGCAAC29TC35GA2GA14CT1CG6TG12GAGAAGCA1GT2GT1GC-T-A-A8AG2AG2TG1AGCGAGGA3GTTG3-A-T-G11AG2GA21TACG1TA6AT1GA2AG6GT3TG13CT16GA2GA9GA4AG3A-G-A-3A-T-G-G-T-A-A-T-T-A-T-T-1TC7GA5TC9TC29AG5AC22TA15GT1AT12GA6GA4AGCAACAG41GA50TC34CT43CAAC14CA13GAGATC10TG2GA1GA1GAGA1TC1AGCT2GC-C-A-G-A-G-A10AGGA6TGAT1GA2GAGT2CG2TA2CT4GA4AG3AC12TA5AG2AG12CT1GATC7GA2TA1GA3TC1GACGAC8TA2GA6AG1GA-A-A-T13AT5CATG3CT28AG39AT5AC20ATAT1G-C-2CT1CG-T2AT1-G2TG2AC2GATAAGCGTG1GCGA3GA1TC5GA4AG1-G-A-C-A-C-A45GA34AT20CA12TC25GT1CGTC3GA1-T3CTA-A-C-A-C-C-A-10TC23AG40GA15GA66CT44AG1GC2GA3GA2TC40AG20AG17AG3TC23GA20GA8CG35TA36AC38GA3AG6GA1GTAC3TC18AC9GA1TC18TC2AT1TC6AGCA9GA1TA3AG6CA8AC7GA8GA13AG16GAGA9CT11CT6AT4TC20AG59CT22GA1TC5GA31CA36GACT2CG9AC4TC3AG13TA6AG50ATAG42TC9CT1TG5GA17CGAT72AG11TG5AG3TC2TG9CT1TG3TC2CA4CG18TG6GACT16GT21TG2GA12AC40GA12TC10TC6GA21TC9AG3AC8AC22AG129AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC20CT-T56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,1,616,9086,9719,0.0,760,92.283,586,plus,24AG12TC8AG34GA56TA20-C-A-G-A-T-A-A-G-A-T-A-G-A-A-G-A-G-G3CA1GA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT8AT9GA34GA12AG27AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN692145,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9689,9719,635,9074,9689,1,634,0.0,752,91.811,583,plus,23ACAG12TC8AG34GA25GA30TA20-C-A-G-A-G-A-A-G-T-T-A-G-A-A-G-A-A-G3CATCGA1CAAG7TCGAAC3AC3CT1GA7CTAG8GT2GA5AT9GA34GA40AT23TG31G-21GA1AT22GC18-T2CT56GA134
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,8446,666,9069,1323,9673,0.0,9611,90.161,7615,plus,18GA5TC17TG5CT8TC18GATC31TG1AG108CA25GA20TC6CT38TC9AGGA5GA45TC17AT7AG35GA5AG2TC11AG17AG8AG38GA2GA14AG31CT4GAGA1AT4CT1AC4CA35CACT6AG28TC5AG44GA18GA5CT29AG11TCCT19C-T-2C-C-T-C-A-G-A-G-C-C-G-A-C-C-A-G-A-A-A-3CT28C-C-A-G-C-C-C-C-T-19TC5AT2-A-G-A11TC14AC1AG2GA8GA5T-C-C-4CT13AG20AC38TC34GA2CA2AGGAAG11AG51AG5AT3GA3CT9TCAT1CT5CT17GA51CA11CT13CT11AG32CT8GA17AG41AG59GA20TCGA1CT53AC9AG10TA11TC6CT19CA45AG13AG59TC14AG44GA3CT1GA14GAACCA69AG12GA7AG5GA9AT11TC19GA2CT11CT17GT15AG25AG11GA2AC2TC32AG5AG20TCGC13GA1AG12GA8GA12TC11GA43GA14TA2GA10CTAG12GT4GA15CA13AGGC4TC2GA47GA13CT12TC14GA27TA10TC16GA14GA1TC1AG11AG26TG20CT17CT2CT35AG12AG37TC5TG1AC5CT22GA16GA9AC3AC18AG5AG8CA3CT7CT14GACT28GA11GA21AC21GA12AG26CT11GA5CA26GA9CT46AT2AG8AT2CA27AG22AG6AG55TC8GA20TA8GA22AG4AG49GT11GA8AG11CT3AC8CT34AT9CA11AG2AGAC3AG2GT1AG39TA17GA29TA110AG41AC5GA34CA31GA28TC38CT35AG91TC11AG5AGAG6CT1AGAGAGAG4GTCT9CT2TC2CT4CG1AC28TC16AC42GA17CT23AG4GA27CATC10TA9GC2CT4TC5TC11AC14TG3AT10TC1GT67AG5GT13GA26AT1AC53AG6TC28AG10GAAT17CT5AGCACTAT5AC2AT1AG1CT4AG3TC29AG35AC10TC2-T17AGCA15AG2GATC2TGGA2AG2AG26AC38GAGA3CG46GT5TC3CAAC43AC8TG3CA3AGGA18TC1CT5CT14AG9TC4TC2TA2GCACGA3TG26GACT22AT8GAGT39TC1AGAGAT5AG5AC3GT30CT5G-G-A-T-C-A-G-G-A-4TA1GA11-G-G-A-G-A-T-G-G-G6AG9GC33GA1GA5TA37GAAG2TA4ACTC11CT32AG44TC8TA7AT4AGAT21TC12AG7GA2CA22AG29CT6GA16CG6TG11AG1GAAG9G-T-A-G-G-2ATTA1AC2CT1AGATTACG1CAAG1TG1AG1-G1CA1AG2A-C-3AGCG2GAGA1AG4AG2GA1CA20CG4GAAGGC7AG3AG4GAAG6CT5CT17GA1CA2GA10GAGT4AC3AC2TC4CAAG4TC2AG3CT2TC33AT7AG21AG1TC2AG11AG8GA5GTGA2GA3TC23ACGA35AG8GA11AG11TC2CT9AG5AG5CA9ATAC8AG7GC5ACTC14AG2TC1GC4AG3TA39TA2ACAC2GA1-C-C2-A-G-A-G-G-A-C11AT2TGAT1GA3CT3GACA1G-A-T-7GA4AG20CT3G-3-G2GA1TA6GA9GACAAC1AG4TC1GAAGAC8GA3AC10ATGA19TG5AC12ACTCGA7AT42CTAT6GA19ATGT1GATA2AG1-A-C-T-T3-G-T3-G-A2-G-G-T2TA1-T3-A-C-T-G-A-A4CG1AG1AC1ACTA5AC5GA25GT7GA28TC8GAACTA6GA2CT17AG2AGAC21C-A-A-3AGTC1G-T-3G-1GT3AT1GC4CT15GA3AG6AG30CT17GA27CA32AG1AG3GAC-G-T-8AT7CT38GC3CA16AG29AG12CT29AC28AG15GA5TG17CA56AG14AG10CT9TCATCG2TAACCACG2CT3GA2AC3TC10CG17CA1AC9GA1GCATAT4TC2ATAC4CA4GA10TA3AG2GA12AC1GA8AG3CT5CA9AG17GATC8AT18AT25AG10AG4AG11TC31CT11AG2GT7TA21AC46GA7GAGTATAC9CATC4TC3AGCG4CT11CT31AG24GACATC5CT4CG2GC9AG12GAAGTC6GA2CT7GA6GA10TG37AG3TC3TC2CA14AG17GA4GT4AG2AGTC1GT1CT6TA3TG15GA11AC2AG6GACT5AT4AG21GA2TA2AG2GACT28G-A-A-2A-A-T-T-G-A-T-C-C-A-A-G-G-C-C-T-G-C-T-G-C-A-A-G-G-A-G-G-G-A-2AG17CA1GA4AG18TC8TC26TG2AG4TC41AG2AG2CT10GC33AG6TG1GA48TCGAGC5GA11AT9TC5GA1TC14AC13GA3AG14AG13TA23TA18TG5CTCA1AGGA4GAAG8GA12AC1TA5CT8AG19AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TCAGGTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,627,46,669,1326,700,0.0,792,94.258,591,minus,33TC20TC68TG1GT16AT7AG3GATC3GACTCTTG4TG15CT11CT31CT9CA19CTAC6TC7TC14GT63TC3AG3CT3TC8CT43TC30CT37CT7TG18CT53AT1-T-T-T55
+MN090335,Ref.B.FR.83.HXB2_LAI_IIIB_BRU.K03455,0,9069,9719,588,8482,9069,1,588,0.0,673,89.966,529,plus,14TCGAGC5GAAC10AT9TC5GA1TC14AC13GA3AG14AG6GA6TA23TA18TG5CGCA1AGGT4GAAG1GA5TCGA12AC1TA5CT8AG13GA5AT3TC1AG3GA11AGTA5AG10AC4GA2GA8TC1GTAG8AG1ATAG13AT3AGGA10CTTC5ATTG37TC16CT22GC21CT24GA120
diff --git a/tests/expected-results-small/errors.json b/tests/expected-results-small/errors.json
index 70fee23..a532cd3 100644
--- a/tests/expected-results-small/errors.json
+++ b/tests/expected-results-small/errors.json
@@ -59,18 +59,28 @@
             "sequence_name": "KX505501.1",
             "error": "LongDeletion",
             "message": "Query sequence contains a long deletion."
+        },
+        {
+            "sequence_name": "KX505501.1",
+            "error": "Scramble",
+            "message": "Sequence is plus-scrambled."
         }
     ],
     "MN691959": [
         {
             "sequence_name": "MN691959",
-            "error": "InternalStopInOrf",
-            "message": "Smaller ORF vpu at 5625-5871 contains an internal stop codon at 5688"
+            "error": "FrameshiftInOrf",
+            "message": "Smaller ORF vpr at 5558-5850 contains out of frame indels that impact 79 positions."
         },
         {
             "sequence_name": "MN691959",
             "error": "InternalStopInOrf",
-            "message": "Smaller ORF tat_exon2 at 7937-8030 contains an internal stop codon at 7982"
+            "message": "Smaller ORF vpu at 6061-6310 contains an internal stop codon at 6124"
+        },
+        {
+            "sequence_name": "MN691959",
+            "error": "InsertionInOrf",
+            "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 249"
         }
     ],
     "MN692074": [
@@ -140,11 +150,6 @@
             "sequence_name": "MN692145",
             "error": "InsertionInOrf",
             "message": "Smaller ORF nef at 8796-9417 can have maximum insertions 90, got 231"
-        },
-        {
-            "sequence_name": "MN692145",
-            "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
         }
     ],
     "MN090335": [
@@ -176,7 +181,7 @@
         {
             "sequence_name": "MN090335",
             "error": "Scramble",
-            "message": "Sequence is plus-scrambled."
+            "message": "Sequence is minus-scrambled."
         },
         {
             "sequence_name": "MN090335",
diff --git a/tests/expected-results-small/orfs.json b/tests/expected-results-small/orfs.json
index ce524b6..5cdefb5 100644
--- a/tests/expected-results-small/orfs.json
+++ b/tests/expected-results-small/orfs.json
@@ -116,18 +116,18 @@
             "name": "gag",
             "orientation": "forward",
             "start": 639,
-            "end": 2148,
-            "distance": 0.3007843137254913,
+            "end": 2142,
+            "distance": 0.05400000000000005,
             "protein": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ",
-            "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*R*",
-            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGATCGATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAGGATAGAGATAAAAGACACCAAGGAAGCTTTAGAGAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAGGACACAGCAACCAGATCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAGTGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGAGTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCYWYCTWTCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAAGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGACCWGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGCCATAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAATTCAGCTACCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAGATTGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGAGTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAG"
+            "aminoacids": "MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALEKIEEEQNKSKKKAQQAAADTGHSNQISQNYPIVQNIQGQVVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNXXXPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQANFLGKIWPSYKGRPGNFLQSRPEPTAPPEESFRSGVETTTPSQKQEPIDKELYPLTSLRSLFGNDPSSQ*",
+            "nucleotides": "ATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAGAATTAGATCGATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGACAGCTACAACCATCCCTTCAGACAGGATCAGAAGAACTTAGATCATTATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAGGATAGAGATAAAAGACACCAAGGAAGCTTTAGAGAAGATAGAGGAAGAGCAAAACAAAAGTAAGAAAAAAGCACAGCAAGCAGCAGCTGACACAGGACACAGCAACCAGATCAGCCAAAATTACCCTATAGTGCAGAACATCCAGGGGCAAGTGGTACATCAGGCCATATCACCTAGAACTTTAAATGCATGGGTAAAAGTAGTAGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACCATCAATGAGGAAGCTGCAGAATGGGATAGAGTGCATCCAGTGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCTTCAGGAACAAATAGGATGGATGACAAATAATCYWYCTWTCCCAGTAGGAGAAATTTATAAAAGATGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTACCAGCATTCTGGACATAAGACAAGGACCAAAAGAACCCTTTAGAGACTATGTAGACCGGTTCTATAAAACTCTAAGAGCCGAGCAAGCTTCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACTATTTTAAAAGCATTGGGACCWGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGAGGACCCGGCCATAAGGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAAATTCAGCTACCATAATGATGCAGAGAGGCAATTTTAGGAACCAAAGAAAGATTGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCACATAGCCAGAAATTGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACACCAAATGAAAGAGTGTACTGAGAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAA"
         },
         {
             "name": "pol",
             "orientation": "forward",
             "start": 1934,
             "end": 4946,
-            "distance": 0.1750246791707799,
+            "distance": 0.03589232303090717,
             "protein": "FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED",
             "aminoacids": "FFREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTRALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPRFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED*",
             "nucleotides": "TTTTTTAGGGAAGATCTGGCCTTCCTACAAGGGAAGGCCAGGGAATTTTCTTCAGAGCAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTCTGGGGTAGAGACAACAACTCCCTCTCAGAAGCAGGAGCCGATAGACAAGGAACTGTATCCTTTAACTTCCCTCAGATCACTCTTTGGCAACGACCCCTCGTCACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAGTTTGCCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTCATAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATGAAGACTTCAGGAAGTATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGAGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAGCTGAGACAACATCTGTTGAGGTGGGGACTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTGAATTGGGCAAGTCAGATTTACCCAGGGATTAAAGTAAGGCAATTATGTAAACTCCTTAGGGGAACCAGAGCATTAACAGAAGTAATACCACTAACAGAAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAAATTCTAAAAGAACCAGTACATGGAGTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGGAAATATGCAAGAACGAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAACCACAGAAAGTATAGTAATATGGGGAAAGACTCCTAGATTTAAACTACCCATACAAAAGGAAACATGGGAAACATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCTTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGGTATGTTACTAACAAAGGAAGACAAAAGGTTGTCCCCCTAACTAACACAACAAATCAGAAGACTGAGTTACAAGCAATTTATCTAGCTTTGCAGGATTCGGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATCAAAGTGAATCAGAGTTAGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGGTCTATCTGGCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAATACTATTTTTAGATGGAATAGATAAGGCCCAAGATGAACATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAGGAAACAGCATATTTTCTTTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTGCTACGGTTAAGGCCGCCTGTTGGTGGGCGGGAATCAAGCAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAG"
@@ -137,7 +137,7 @@
             "orientation": "forward",
             "start": 4890,
             "end": 5469,
-            "distance": 0.34375,
+            "distance": 0.0625,
             "protein": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH",
             "aminoacids": "MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYERTHPRISSEVYIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH*",
             "nucleotides": "ATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGGAAAAGTTTAGTAAAACACCATATGTATGTTTCAGGGAAAGCTAGGGGATGGTTTTATAGACATCACTATGAAAGAACTCATCCAAGAATAAGTTCAGAAGTATACATCCCACTAGGGGATGCTAGATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGTCAGGGAGTCTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTGAACTAGCAGACCAACTAATTCATCTGTATTACTTTGACTGTTTTTCAGACTCTGCTATAAGAAAGGCCTTATTAGGACATATAGTTAGCCCTAGGTGTGAATATCAAGCAGGACATAACAAGGTAGGATCTCTACAATACTTGGCACTAGCAGCATTAATAACACCAAAAAAGATAAAGCCACCTTTGCCTAGTGTTACAAAACTGACAGAGGATAGATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAG"
@@ -146,18 +146,18 @@
             "name": "vpr",
             "orientation": "forward",
             "start": 5408,
-            "end": 5699,
-            "distance": 0.375,
+            "end": 5702,
+            "distance": 0.21153846153845945,
             "protein": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS",
-            "aminoacids": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*",
-            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACATTTTCCTAGGATTTGGCTCCATGGCTTAGGGCAACATATCTATGAAACTTATGGGGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATCCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGCGTTACTCAACAGAAGAGAGCAAGAAATGGAGCCAGTAGATCCTAG"
+            "aminoacids": "MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIGVTQQKRARNGASRS*T",
+            "nucleotides": "ATGGAACAAGCCCCAGAAGACCAAGGGCCACAGAGGGAGCCACACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGACATTTTCCTAGGATTTGGCTCCATGGCTTAGGGCAACATATCTATGAAACTTATGGGGATACTTGGGCAGGAGTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATCCATTTCAGAATTGGGTGTCGACATAGCAGAATAGGCGTTACTCAACAGAAGAGAGCAAGAAATGGAGCCAGTAGATCCTAGACT"
         },
         {
             "name": "tat_exon1",
             "orientation": "forward",
             "start": 5679,
             "end": 5895,
-            "distance": 0.2777777777777777,
+            "distance": 0.29166666666666674,
             "protein": "MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ",
             "aminoacids": "MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFMTKALGISYGRKKRRQRRRPPQDSQTHQVSLSKQ",
             "nucleotides": "ATGGAGCCAGTAGATCCTAGACTAGAGCCCTGGAAGCATCCAGGAAGTCAGCCTAAAACTGCTTGTACCACTTGCTATTGTAAAAAGTGTTGCTTTCATTGCCAAGTTTGTTTCATGACAAAAGCCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAGACAGTCAGACTCATCAAGTTTCTCTATCAAAGCAG"
@@ -167,7 +167,7 @@
             "orientation": "forward",
             "start": 5818,
             "end": 5896,
-            "distance": 0.46153846153846145,
+            "distance": 0.5769230769230769,
             "protein": "MAGRSGDSDEDLLKTVRLIKFLYQSS",
             "aminoacids": "MAGRSGDSDEDLLKTVRLIKFLYQSS",
             "nucleotides": "ATGGCAGGAAGAAGCGGAGACAGCGACGAAGACCTCCTCAAGACAGTCAGACTCATCAAGTTTCTCTATCAAAGCAGT"
@@ -177,8 +177,8 @@
             "orientation": "forward",
             "start": 5910,
             "end": 6156,
-            "distance": 1.809876543209876,
-            "protein": "MQPIQIAIVALVVAIIIAIVV",
+            "distance": 0.7060975609756097,
+            "protein": "SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL",
             "aminoacids": "MQPIQIAIVALVVAIIIAIVV*SIVIIEYRKILRQRKIDRLIDRLIERAEDSGNESEGEVSALVEMGVEMGHHAPWDIDDL*",
             "nucleotides": "ATGCAACCTATACAAATAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGTGTGATCCATAGTAATCATAGAATATAGGAAAATATTAAGACAAAGGAAAATAGACAGGTTAATTGATAGACTAATAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAG"
         },
@@ -186,18 +186,18 @@
             "name": "env",
             "orientation": "forward",
             "start": 6070,
-            "end": 8656,
-            "distance": 0.4873684210526319,
+            "end": 8683,
+            "distance": 0.0867990654205606,
             "protein": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL",
-            "aminoacids": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*",
-            "nucleotides": "ATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAGGAAGCAACCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATGCAGAGGTACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTAGTTTAAAGTGCACTGATTTGGGGAATGCTACTAATACCAATAGTAGTAATACCAATAGTAGTAGCGGGGAAATGATGATGGAGAAAGGAGAGATAAAAAACTGCTCTTTCAATATCAGCACAAGCATAAGAAATAAGGTGCAGAAAGAATATGCATTCTTTTATAAACTTGATATAGTACCAATAGATAATGATACTACCAGCTATACGTTGACAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAATGTAATAATAAGACGTTCAATGGAACAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGATGTAGTAATTAGATCTGCCAATTTCACAGACAATGCTAAAACCATAATAGTACAGCTGAACCAATCTGTAGAAATTAATTGTACAAGACCCAACAACAATACAAGAAAAAGTATCCGTATCCAGAGAGGACCAGGGAGAGCATTTGTTACAATAGGAAAAATAGGAAATATGAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGCCACTTTAAAACAGATAGCTAGCAAATTAAGAGAACAATTTGGAAATAATAAAACAATAATCTTTAAGCAATCCTCAGGAGGGGACCCAGAAATTGTAACGCACAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAACACAACTGTTTAATAGTACTTGGTTTAATAGTACTTGGAGTACTGAAGGGTCAAATAACACTGAAGGAAGTGACACAATCACACTCCCATGCAGAATAAAACAATTTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGCGGACAAATTAGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGTAATAACAACAATGGGTCCGAGATCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGCTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGAATAACATGACCTGGATGGAGTGGGACAGAGAAATTAACAATTACACAAGCTTAATACACTCCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTAACATAACAAATTGGCTGTGGTATATAAAATTATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAGTGCTGTTAGCTTGCTCAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAGGAGCTTATAGAGCTATTCGCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGATTTTGCTATAA"
+            "aminoacids": "MRVKEKCQHLWRWGWRWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYDAEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMMMEKGEIKNCSFNISTSIRNKVQKEYAFFYKLDIVPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDVVIRSANFTDNAKTIIVQLNQSVEINCTRPNNNTRKSIRIQRGPGRAFVTIGKIGNMRQAHCNISRAKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKLFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTHLPNPGGPDRPEGIEEEGGERDRDRSIRLVNGSLALIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGAYRAIRHIPRRIRQGLERILL*DGWQVVKK*",
+            "nucleotides": "ATGAGAGTGAAGGAGAAGTGTCAGCACTTGTGGAGATGGGGGTGGAGATGGGGCACCATGCTCCTTGGGATATTGATGATCTGTAGTGCTACAGAAAAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAGGAAGCAACCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATGCAGAGGTACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTATTGGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTAGTTTAAAGTGCACTGATTTGGGGAATGCTACTAATACCAATAGTAGTAATACCAATAGTAGTAGCGGGGAAATGATGATGGAGAAAGGAGAGATAAAAAACTGCTCTTTCAATATCAGCACAAGCATAAGAAATAAGGTGCAGAAAGAATATGCATTCTTTTATAAACTTGATATAGTACCAATAGATAATGATACTACCAGCTATACGTTGACAAGTTGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCGGCTGGTTTTGCGATTCTAAAATGTAATAATAAGACGTTCAATGGAACAGGACCATGTACAAATGTCAGCACAGTACAATGTACACATGGAATTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGATGTAGTAATTAGATCTGCCAATTTCACAGACAATGCTAAAACCATAATAGTACAGCTGAACCAATCTGTAGAAATTAATTGTACAAGACCCAACAACAATACAAGAAAAAGTATCCGTATCCAGAGAGGACCAGGGAGAGCATTTGTTACAATAGGAAAAATAGGAAATATGAGACAAGCACATTGTAACATTAGTAGAGCAAAATGGAATGCCACTTTAAAACAGATAGCTAGCAAATTAAGAGAACAATTTGGAAATAATAAAACAATAATCTTTAAGCAATCCTCAGGAGGGGACCCAGAAATTGTAACGCACAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAACACAACTGTTTAATAGTACTTGGTTTAATAGTACTTGGAGTACTGAAGGGTCAAATAACACTGAAGGAAGTGACACAATCACACTCCCATGCAGAATAAAACAATTTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATCAGCGGACAAATTAGATGTTCATCAAATATTACAGGGCTGCTATTAACAAGAGATGGTGGTAATAACAACAATGGGTCCGAGATCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAATATAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAAAAAAGAGCAGTGGGAATAGGAGCTTTGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCGCAGCGTCAATGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAGCAGCAGAACAATTTGCTGAGGGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCAAGAATCCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCCTGGGGATTTGGGGCTGCTCTGGAAAACTCATTTGCACCACTGCTGTGCCTTGGAATGCTAGTTGGAGTAATAAATCTCTGGAACAGATTTGGAATAACATGACCTGGATGGAGTGGGACAGAGAAATTAACAATTACACAAGCTTAATACACTCCTTAATTGAAGAATCGCAAAACCAGCAAGAAAAGAATGAACAAGAATTATTGGAATTAGATAAATGGGCAAGTTTGTGGAATTGGTTTAACATAACAAATTGGCTGTGGTATATAAAATTATTCATAATGATAGTAGGAGGCTTGGTAGGTTTAAGAATAGTTTTTGCTGTACTTTCTATAGTGAATAGAGTTAGGCAGGGATATTCACCATTATCGTTTCAGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAGTGCTGTTAGCTTGCTCAATGCCACAGCTATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAGGAGCTTATAGAGCTATTCGCCACATACCTAGAAGAATAAGACAGGGCTTGGAAAGGATTTTGCTATAAGATGGGTGGCAAGTGGTCAAAAAGTAG"
         },
         {
             "name": "tat_exon2",
             "orientation": "forward",
             "start": 8237,
             "end": 8333,
-            "distance": 1.243333333333333,
+            "distance": 0.19999999999999996,
             "protein": "RPTSQTRGDPTGPKE",
             "aminoacids": "RPTSQTRGDPTGPKE*KKKVERETETDPFD**",
             "nucleotides": "AGACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGA"
@@ -207,7 +207,7 @@
             "orientation": "forward",
             "start": 8238,
             "end": 8514,
-            "distance": 0.4945054945054945,
+            "distance": 0.16483516483516492,
             "protein": "DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE",
             "aminoacids": "DPPPKPGGTRQARRNRRRRWRERQRQIHSISERILSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTSGTQGVGSPQILVESPTILESGAKE*",
             "nucleotides": "GACCCACCTCCCAAACCCGGGGGGACCCGACAGGCCCGAAGGAATAGAAGAAGAAGGTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTAGCACTTATCTGGGACGATCTGCGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTACTCTTGATTGTAACGAGGATTGTGGAACTTCTGGGACGCAGGGGGTGGGAAGCCCTCAAATATTGGTGGAATCTCCTACAATATTGGAGTCAGGAGCTAAAGAATAG"
@@ -217,7 +217,7 @@
             "orientation": "forward",
             "start": 8657,
             "end": 9278,
-            "distance": 0.5230392156862744,
+            "distance": 0.16991869918698432,
             "protein": "MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC",
             "aminoacids": "MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC*",
             "nucleotides": "ATGGGTGGCAAGTGGTCAAAAAGTAGTGTGATTGGATGGCCTACTGTAAGGGAAAGAATGAGACGAGCTGAGCCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAGACCTGGAAAAACATGGAGCAATCACAAGTAGCAATACAGCAGCTACCAATGCTGCTTGTGCCTGGCTAGAAGCACAAGAGGAGGAGGAGGTGGGTTTTCCAGTCACACCTCAGGTACCTTTAAGACCAATGACTTACAAGGCAGCTGTAGATCTTAGCCACTTTTTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAGAAGACAAGATATCCTTGATCTGTGGATCTACCACACACAAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGATCAGATATCCATTGACCTTTGGATGGTGCTACAAGCTAGTACCAGTTGAGCCAGATAAGGTAGAAGAGGCCAATAAAGGAGAGAACACCAGCTTGTTACACCCTGTGAGCCTGCATGGAATGGATGACCCTGAGAGAGAAGTGTTAGAGTGGAGGTTTGACAGCCGCCTAGCATTTCATCACGTGGCCCGAGAGCTGCATCCGGAGTACTTCAAGAACTGCTGA"
diff --git a/util/subtype_alignments/A1.fasta.nin b/util/subtype_alignments/A1.fasta.nin
index 8c0fa4c..8030643 100644
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diff --git a/util/subtype_alignments/A1.fasta.nsq b/util/subtype_alignments/A1.fasta.nsq
index e1dc1c9..5d596f4 100644
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diff --git a/util/subtype_alignments/A2.fasta.nin b/util/subtype_alignments/A2.fasta.nin
index 04db5e2..5dbebb3 100644
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diff --git a/util/subtype_alignments/A2.fasta.nsq b/util/subtype_alignments/A2.fasta.nsq
index f00db07..07b614b 100644
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diff --git a/util/subtype_alignments/B.fasta.nin b/util/subtype_alignments/B.fasta.nin
index 0eee7bd..7e3cc59 100644
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index 8d7764a..c5e4718 100644
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diff --git a/util/subtype_alignments/C.fasta.nin b/util/subtype_alignments/C.fasta.nin
index 86c5b16..9829037 100644
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index 63ad5dc..2ac43c4 100644
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diff --git a/util/subtype_alignments/D.fasta.nin b/util/subtype_alignments/D.fasta.nin
index acad085..4fc227e 100644
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diff --git a/util/subtype_alignments/D.fasta.nsq b/util/subtype_alignments/D.fasta.nsq
index 9cae0d6..2e80fc3 100644
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diff --git a/util/subtype_alignments/F1.fasta.nin b/util/subtype_alignments/F1.fasta.nin
index 5291d67..44128e5 100644
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index 1e13f3b..a49e6b9 100644
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diff --git a/util/subtype_alignments/F2.fasta.nin b/util/subtype_alignments/F2.fasta.nin
index d14a5c2..3d87ca0 100644
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index 73772d4..d633f51 100644
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diff --git a/util/subtype_alignments/G.fasta.nin b/util/subtype_alignments/G.fasta.nin
index d850b07..5818561 100644
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index cbb57fa..b7a0514 100644
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index 922233a..1e77b80 100644
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index a5875ac..63dc451 100644
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diff --git a/util/subtype_alignments/all.fasta.nin b/util/subtype_alignments/all.fasta.nin
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index fd5584e..57ab1d4 100644
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