From 32b905f10d3fe3a0fded52e348c32d2790fcd66b Mon Sep 17 00:00:00 2001
From: Vitaliy Mysak <vmysak@bccfe.ca>
Date: Tue, 30 May 2023 14:36:54 -0700
Subject: [PATCH] remove long-deletion TODO comment

---
 intact/intact.py | 2 --
 1 file changed, 2 deletions(-)

diff --git a/intact/intact.py b/intact/intact.py
index eefe505..d0fbb14 100644
--- a/intact/intact.py
+++ b/intact/intact.py
@@ -117,8 +117,6 @@ def has_long_deletion(sequence, alignment):
                      reference and query sequence.
     """
     # NOTE: This is the same check that HIVSeqInR uses.
-    # TODO: However, it does not actually imply a long deletion
-    #       in consecutive positions. Make sure that it is fine.
     if len(sequence.seq) < 8000:
         return IntactnessError(sequence.id,
                                LONGDELETION_ERROR,