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subtypes: handle the case where and end is not found main #54: Commit 2ed9aaf pushed by Donaim
March 12, 2024 20:09 1m 12s master
master
March 12, 2024 20:09 1m 12s
simplify finding the best matching frame code main #53: Commit 90b33a9 pushed by Donaim
March 12, 2024 20:09 51s master
master
March 12, 2024 20:09 51s
fix blast_iterate_inf default value main #52: Commit 2a906b7 pushed by Donaim
March 12, 2024 20:09 1m 33s master
master
March 12, 2024 20:09 1m 33s
update README to mention BLAST dependency main #51: Commit f14f8af pushed by Donaim
March 12, 2024 20:09 1m 0s master
master
March 12, 2024 20:09 1m 0s
replace deprecated pkg_resources package main #50: Commit c57d265 pushed by Donaim
March 12, 2024 20:09 1m 2s master
master
March 12, 2024 20:09 1m 2s
test: enable nonhiv, scramble and internal inversion checks main #49: Commit 2c4ed18 pushed by Donaim
March 12, 2024 20:09 1m 35s master
master
March 12, 2024 20:09 1m 35s
fix blast_rows alignment with sequences main #48: Commit 7371fa3 pushed by Donaim
March 12, 2024 20:09 1m 0s master
master
March 12, 2024 20:09 1m 0s
test: remove dead code main #47: Commit 1e26b3e pushed by Donaim
March 12, 2024 20:09 1m 46s master
master
March 12, 2024 20:09 1m 46s
run nonhiv, scramble and internal inversion checks main #46: Commit 348953b pushed by Donaim
March 12, 2024 20:09 1m 14s master
master
March 12, 2024 20:09 1m 14s
use most frequent element to determine scramble check direction main #45: Commit 67ac930 pushed by Donaim
March 12, 2024 20:09 54s master
master
March 12, 2024 20:09 54s
simplify reading of BLAST output main #44: Commit 94902f9 pushed by Donaim
March 12, 2024 20:09 1m 6s master
master
March 12, 2024 20:09 1m 6s
handle the case when BLAST produces no output main #43: Commit db116db pushed by Donaim
March 12, 2024 20:09 1m 0s master
master
March 12, 2024 20:09 1m 0s
fix case of shorter blast output main #42: Commit e39ff56 pushed by Donaim
March 12, 2024 20:09 58s master
master
March 12, 2024 20:09 58s
fix first blast_rows instance main #41: Commit b449323 pushed by Donaim
March 12, 2024 20:09 54s master
master
March 12, 2024 20:09 54s
do not run blast unless required main #40: Commit 8dc9dd1 pushed by Donaim
March 12, 2024 20:09 1m 2s master
master
March 12, 2024 20:09 1m 2s
iterate blast_rows together with sequences main #39: Commit 52100f5 pushed by Donaim
March 12, 2024 20:09 1m 7s master
master
March 12, 2024 20:09 1m 7s
ci: install BLAST main #38: Commit da2552d pushed by Donaim
March 12, 2024 20:09 1m 8s master
master
March 12, 2024 20:09 1m 8s
add missing iterate_values_from_tsv function main #37: Commit 5c54658 pushed by Donaim
March 12, 2024 20:09 1m 18s master
master
March 12, 2024 20:09 1m 18s
factor out sequence iterator main #36: Commit df07687 pushed by Donaim
March 12, 2024 20:09 1m 3s master
master
March 12, 2024 20:09 1m 3s
improve BlastRow constructor main #35: Commit bbbc8c4 pushed by Donaim
March 12, 2024 20:09 58s master
master
March 12, 2024 20:09 58s
add scramble and nonhiv checks as command line options main #34: Commit 845db4a pushed by Donaim
March 12, 2024 20:09 1m 22s master
master
March 12, 2024 20:09 1m 22s
split is_scrambled and contains_internal_inversion checks main #33: Commit 9c2d3c5 pushed by Donaim
March 12, 2024 20:09 1m 1s master
master
March 12, 2024 20:09 1m 1s
rename check_nonhiv to is_nonhiv and check_scramble to is_scrambled main #32: Commit 11a6003 pushed by Donaim
March 12, 2024 20:09 1m 4s master
master
March 12, 2024 20:09 1m 4s
fix message spacing bug main #31: Commit 5f82fcc pushed by Donaim
March 12, 2024 20:09 52s master
master
March 12, 2024 20:09 52s
use @dataclass decorators for all types main #30: Commit 8c6c7b0 pushed by Donaim
March 12, 2024 20:09 1m 18s master
master
March 12, 2024 20:09 1m 18s
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