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Validate mapping minimum quality limit with other mapping tools. #52

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cerebis opened this issue Jul 2, 2021 · 0 comments

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cerebis commented Jul 2, 2021

It has been pointed out that a default limit of 60 may cause unintended results with mappers besides BWA.

We must validate the use of qc3C using other common tools such as bowtie.

One possibility is that this default is dynamically set based on the maximum reportable quality for a given tool.

This must be tested prior to resolving.

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