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Old Linux distribution import error "GLIBC_2.23' not found" #47
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GLIBC_2.23' not found
From #43
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Hello Niu,
There is the option to use Docker but if you're on Centos 6 then perhaps
that'll also be a problem.
Other than that, my suggested work around was to install qc3C from github,
but use Conda to satisfy the remaining dependencies.
# 1) create a supported Python environment, without qc3C but
everything else you'll need.
conda create -y -n qc3c -c conda-forge -c bioconda -c cerebis samtools
jellyfish "python>3.6"# 2) activate this environment
conda activate qc3c# 3) install qc3C from github using pip
pip install git+https://github.com/cerebis/qc3C
…On Thu, 20 May 2021 at 17:58, Niu Yiwei ***@***.***> wrote:
Hi, I am using CentOS 6.6 and encountered the same error above. Is there
any workaround now?
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Thank you for your prompt reply! I could install qc3C using the method you provided. |
Great to hear that you were successful
…On Fri, 21 May 2021 at 11:15, Niu Yiwei ***@***.***> wrote:
Thank you for your prompt reply! I could install qc3C using the method you
provided.
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Hello,
I am on "Red Hat 4.8.5-39" and had the same issue with bzip2, which is gone in the current conda release. However, now pysam has a problem with a different dependency:
ImportError: /lib64/libm.so.6: version
GLIBC_2.23' not found`Originally posted by @mscharmann in #43 (comment)
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