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References

satishev edited this page Jul 28, 2020 · 1 revision

References

[1] A. Basu, D. Warzel, A. Eftekhari, J. S. Kirby, J. Freymann, J. Knable, A. Sharma, and P. Jacobs, Call for Data Standardization: Lessons Learned and Recommendations in an Imaging Study, JCO Clinical Cancer Informatics, 1–11 (2019).

[2] T. Leek, R. B. Scharpf, H. C. Bravo, D. Simcha, B. Langmead, W. E. Johnson, D. Geman, K. Baggerly, and R. A. Irizarry, Tackling the widespread and critical impact of batch effects in high-throughput data, Nature Reviews Genetics, 733–739 (2010).

[3] L. Scarpace, T. Mikkelsen, S. Cha, S. Rao, S. Tekchandani, D. Gutman, J. Saltz, B. Erickson, N. Pedano, A. Flanders, J. Barnholtz-Sloan, Q. Ostrom, D. Barboriak, and L. Pierce, Radiology Data from The Cancer Genome Atlas Glioblastoma Multiforme [TCGA-GBM] collection, The Cancer Imaging Archive, http://doi.org/10.7937/K9/TCIA.2016.RNYFUYE9.

[4] E. A. Gardner, J. H. Ellis, R. J. Hyde, A. M. Aisen, D. J. Quint, and P. L. Carson, Detection of degradation of magnetic resonance (MR) images: comparison of an automated MR image-quality analysis system with trained human observers, Academic Radiology 2, 277--281 (1995).

[5] O. Ieremeiev, V. Lukin, N. Ponomarenko, and K. Egiazarian, Robust linearized combined metrics of image visual quality, Electronic Imaging 2018, 260--1--260--6 (2018).

[6] J. P. Woodard and M. P. Carley-Spencer, No-reference image quality metrics for structural MRI, Neuroinformatics 4, 243--262 (2006).

[7] P. S. Foundation, The Python Package Index (PyPI), https://pypi.org/.

[8] S. van der Walt, J. L. Schonberger, J. Nunez-Iglesias, F. Boulogne, J. D. Warner, N. Yager, E. Gouillart, T. Yu, and the scikit-image contributors, scikit-image: image processing in Python, PeerJ 2, e453 (2014).

[9] S. Bakas, H. Akbari, A. Sotiras, M. Bilello, M. Rozycki, J. S. Kirby, J. B. Freymann, K. Farahani, and C. Davatzikos, Advancing the cancer genome atlas glioma MRI collections with expert segmentation labels and radiomic features, Scientific data 4, 170117 (2017).

[10] O. Esteban, D. Birman, M. Schaer, O. O. Koyejo, R. A. Poldrack, and K. J. Gorgolewski, MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites, PloS one (2017).

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