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update readme
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monicadragan2 committed Oct 28, 2024
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Expand Up @@ -35,5 +35,5 @@ The expected input is a JSON file with the following key values:<br/>
| pairwise_distances | List of dictionaries where the keys are the tree ids of the pair of trees (strings) and the distance score (float).<br/><br/> Example:<br/>[{'sample_1': 'AML-73-001', 'sample_2': 'AML-22-001', 'distance': 0.6072}, … ]</br></br> A tree distance metric can be obtained e.g., with <a href=https://doi.org/10.1093/bioinformatics/btae214 target=onc>oncotree2vec</a>.|
| highlighted_genes | Styles used: "bold", "italic", color code.<br/><br/>Example:<br/>{"bold": ["JAK2", "PTEN", "TP53", "AKT1"]} |

<br/><br/>The JSON files used for the predefined datasets are available in the <i>data</i> folder.
<br/>The JSON files used for the predefined datasets are available in the <i>data</i> folder.

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