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DESCRIPTION
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DESCRIPTION
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Package: epiNEM
Type: Package
Title: epiNEM
Version: 1.31.0
Authors@R: c(person("Martin", "Pirkl",
email = "[email protected]",
role = c("aut", "cre")),
person("Madeline", "Diekmann",
role = c("aut")))
Author: Madeline Diekmann & Martin Pirkl
Maintainer: Martin Pirkl <[email protected]>
Description: epiNEM is an extension of the original Nested Effects
Models (NEM). EpiNEM is able to take into account double
knockouts and infer more complex network signalling pathways.
It is tailored towards large scale double knock-out screens.
Depends: R (>= 4.1)
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: Pathways, SystemsBiology, NetworkInference, Network
RoxygenNote: 7.3.1
Imports: BoutrosLab.plotting.general, BoolNet, e1071, gtools, stats, igraph, utils, lattice,
latticeExtra, RColorBrewer, pcalg, minet, grDevices, graph, mnem, latex2exp
VignetteBuilder: knitr
Suggests: knitr, RUnit, BiocGenerics, STRINGdb, devtools, rmarkdown,
GOSemSim, AnnotationHub, org.Sc.sgd.db, BiocStyle
BugReports: https://github.com/cbg-ethz/epiNEM/issues
URL: https://github.com/cbg-ethz/epiNEM/