From 376a3efdd6aacf36d873a455678579a30c9b4b02 Mon Sep 17 00:00:00 2001
From: weiglszonja <wszonja@gmail.com>
Date: Wed, 5 Jun 2024 14:26:10 +0200
Subject: [PATCH] try activate conda env in every step

---
 .../bioformatsimagingextractors/bioformats_env.yml        | 8 ++++++++
 1 file changed, 8 insertions(+)
 create mode 100644 src/roiextractors/extractors/bioformatsimagingextractors/bioformats_env.yml

diff --git a/src/roiextractors/extractors/bioformatsimagingextractors/bioformats_env.yml b/src/roiextractors/extractors/bioformatsimagingextractors/bioformats_env.yml
new file mode 100644
index 00000000..26556afc
--- /dev/null
+++ b/src/roiextractors/extractors/bioformatsimagingextractors/bioformats_env.yml
@@ -0,0 +1,8 @@
+name: bioformats-environment
+channels:
+  - conda-forge
+dependencies:
+  - bioformats_jar
+  - pip
+  - pip:
+    - aicsimageio>=4.14.0