diff --git a/content/en/blog/2019-05-28-first-blog-post.md b/content/en/blog/2019-05-20-example/index.md similarity index 88% rename from content/en/blog/2019-05-28-first-blog-post.md rename to content/en/blog/2019-05-20-example/index.md index 927c729..d19ae44 100644 --- a/content/en/blog/2019-05-28-first-blog-post.md +++ b/content/en/blog/2019-05-20-example/index.md @@ -3,7 +3,7 @@ slug: explore-with-neurosift title: Exploring data with Neurosift description: > Lorem ipsum dolor sit amet... -authors: [luiztauffer, bendichter] +author: Luiz Tauffer ([@luiztauffer](https://github.com/luiztauffer)) and Ben Dichter ([@bendichter](https://github.com/bendichter)) tags: [hola] date: 2018-01-04 --- diff --git a/content/en/blog/2024-11-10-unraveling/data_reuse_000458_cell-fig4.jpg b/content/en/blog/2024-11-10-unraveling/data_reuse_000458_cell-fig4.jpg new file mode 100644 index 0000000..22904ef Binary files /dev/null and b/content/en/blog/2024-11-10-unraveling/data_reuse_000458_cell-fig4.jpg differ diff --git a/content/en/blog/2024-11-10-unraveling/data_reuse_000458_elife-fig7.jpg b/content/en/blog/2024-11-10-unraveling/data_reuse_000458_elife-fig7.jpg new file mode 100644 index 0000000..c094c63 Binary files /dev/null and b/content/en/blog/2024-11-10-unraveling/data_reuse_000458_elife-fig7.jpg differ diff --git a/content/en/blog/2024-09-09-data_reuse_000458.md b/content/en/blog/2024-11-10-unraveling/index.md similarity index 94% rename from content/en/blog/2024-09-09-data_reuse_000458.md rename to content/en/blog/2024-11-10-unraveling/index.md index 9ce2bee..80350e8 100644 --- a/content/en/blog/2024-09-09-data_reuse_000458.md +++ b/content/en/blog/2024-11-10-unraveling/index.md @@ -1,16 +1,14 @@ --- title: Unraveling Anesthesia's Effect on Brain Activity -authors: [pauladkisson] +author: Paul Adkisson ([@pauladkisson](https://github.com/pauladkisson)) +description: > + Have you ever wondered what happens to your brain when you're under anesthesia? What neural changes coincide with that dramatic loss of consciousness? In this post, we'll explore how two different research teams investigated this fascinating question using the same data from DANDI Archive's [Dandiset #000458](https://dandiarchive.org/dandiset/000458). tags: [ reuse-showcase ] date: 2024-11-10 --- -_Data Reuse Highlight: This blog entry is part of an ongoing series that showcases examples of data reuse and reanalysis using publicly available data on DANDI._ +{{< alert title="Data Reuse Highlight:" >}}This blog entry is part of an ongoing series that showcases examples of data reuse and reanalysis using publicly available data on DANDI.{{< /alert >}} -Have you ever wondered what happens to your brain when you're under anesthesia? What neural changes coincide with that dramatic loss of consciousness? -In this post, we'll explore how two different research teams investigated this fascinating question using the same data from DANDI Archive's [Dandiset #000458](https://dandiarchive.org/dandiset/000458). - -{/* truncate */} ## The Original Study: Peering into the Anesthetized Brain In June 2023, Dr. Leslie Claar and colleagues from the Allen Institute published their groundbreaking findings in the journal _eLife_ in the article, [“Cortico-thalamo-cortical interactions modulate electrically evoked EEG responses in mice”](https://doi.org/10.7554/eLife.84630.3). @@ -28,7 +26,7 @@ This rebound excitation, in turn, drives the second component of the ERP – a c After their experiments, Claar and her team published their data on DANDI, ensuring that it would remain publicly accessible for any future researchers who wanted to use it. The dataset and manuscript were prepared and published concurrently, which ensured that the dataset included all the paper-relevant data and metadata and curious reviewers could inspect the data directly if they so wished. -![Figure1](/img/blog/data_reuse_000458_elife-fig7.jpg) +![Figure1](./data_reuse_000458_elife-fig7.jpg) _**Figure 1: Brain state modulates the ERP via cortico-thalamo-cortical interactions.** (A) Butterfly plot of ERPs during non-running (quiet wakefulness), running (active wakefulness), and isoflurane-anesthetized states. @@ -56,7 +54,7 @@ By reanalyzing this data and manipulating a computational network model, they fo Conversely, setting it to the hyperpolarizing regime (-80mV) mimicked the responses seen in anesthetized mice (Figure 2 B&F right). This data provides evidence for the hypothesized bidirectional relationship. -![Figure2](/img/blog/data_reuse_000458_cell-fig4.jpg) +![Figure2](./data_reuse_000458_cell-fig4.jpg) _**Figure 2: Shunting inhibition promotes local network desynchronization and response flexibility.** (A) High-density Neuropixels (NPXs) recordings were used to compare spiking activity in the same cortical neurons under awake and anesthetized conditions. diff --git a/content/en/blog/news/_index.md b/content/en/blog/news/_index.md deleted file mode 100644 index c609aa2..0000000 --- a/content/en/blog/news/_index.md +++ /dev/null @@ -1,4 +0,0 @@ ---- -title: News -weight: 20 ---- diff --git a/content/en/blog/news/first-post/featured-sunset-get.png b/content/en/blog/news/first-post/featured-sunset-get.png deleted file mode 100644 index db3373c..0000000 Binary files a/content/en/blog/news/first-post/featured-sunset-get.png and /dev/null differ diff --git a/content/en/blog/news/first-post/index.md b/content/en/blog/news/first-post/index.md deleted file mode 100644 index fc07781..0000000 --- a/content/en/blog/news/first-post/index.md +++ /dev/null @@ -1,48 +0,0 @@ ---- -date: 2018-10-06 -title: Easy documentation with Docsy -linkTitle: Announcing Docsy -description: > - The Docsy Hugo theme lets project maintainers and contributors focus on content, - not on reinventing a website infrastructure from scratch -author: Riona MacNamara ([@rionam](https://twitter.com/bepsays)) -resources: - - src: "**.{png,jpg}" - title: "Image #:counter" - params: - byline: "Photo: Riona MacNamara / CC-BY-CA" ---- - -**This is a typical blog post that includes images.** - -The front matter specifies the date of the blog post, its title, a short description that will be displayed on the blog landing page, and its author. - -## Including images - -Here's an image (`featured-sunset-get.png`) that includes a byline and a caption. - -{{< imgproc sunset Fill "600x300" >}} -Fetch and scale an image in the upcoming Hugo 0.43. -{{< /imgproc >}} - -The front matter of this post specifies properties to be assigned to all image resources: - -``` -resources: -- src: "**.{png,jpg}" - title: "Image #:counter" - params: - byline: "Photo: Riona MacNamara / CC-BY-CA" -``` - -To include the image in a page, specify its details like this: - -``` -{{< imgproc sunset Fill "600x300" >}} -Fetch and scale an image in the upcoming Hugo 0.43. -{{< /imgproc >}} -``` - -The image will be rendered at the size and byline specified in the front matter. - -