Run ferc_to_sqlite and pudl_etl independent of integration tests #8809
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| --- | |
| name: tox-pytest | |
| on: [pull_request, workflow_dispatch] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| PUDL_OUTPUT: /home/runner/pudl-work/output/ | |
| PUDL_INPUT: /home/runner/pudl-work/data/ | |
| DAGSTER_HOME: /home/runner/pudl-work/dagster_home/ | |
| jobs: | |
| # ci-static: | |
| # runs-on: ubuntu-latest | |
| # strategy: | |
| # fail-fast: false | |
| # matrix: | |
| # tox-env: | |
| # - linters | |
| # - docs | |
| # defaults: | |
| # run: | |
| # shell: bash -l {0} | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # with: | |
| # fetch-depth: 2 | |
| # - name: Install Conda environment using mamba | |
| # uses: mamba-org/provision-with-micromamba@v16 | |
| # with: | |
| # environment-file: test/test-environment.yml | |
| # cache-env: true | |
| # channels: conda-forge,defaults | |
| # channel-priority: strict | |
| # - name: Log environment details | |
| # run: | | |
| # conda info | |
| # conda list | |
| # conda config --show-sources | |
| # conda config --show | |
| # printenv | sort | |
| # - name: Build ${{ matrix.tox-env}} with Tox | |
| # run: | | |
| # tox -e ${{ matrix.tox-env }} | |
| # - name: Upload coverage | |
| # uses: actions/upload-artifact@v3 | |
| # if: ${{ matrix.tox-env == 'docs' }} | |
| # with: | |
| # name: coverage-docs | |
| # path: coverage.xml | |
| # ci-unit: | |
| # runs-on: ubuntu-latest | |
| # strategy: | |
| # fail-fast: false | |
| # defaults: | |
| # run: | |
| # shell: bash -l {0} | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # with: | |
| # fetch-depth: 2 | |
| # - name: Install Conda environment using mamba | |
| # uses: mamba-org/provision-with-micromamba@v16 | |
| # with: | |
| # environment-file: test/test-environment.yml | |
| # cache-env: true | |
| # channels: conda-forge,defaults | |
| # channel-priority: strict | |
| # - name: Log environment details | |
| # run: | | |
| # conda info | |
| # conda list | |
| # conda config --show-sources | |
| # conda config --show | |
| # printenv | sort | |
| # - name: Log SQLite3 version | |
| # run: | | |
| # which sqlite3 | |
| # sqlite3 --version | |
| # - name: Run unit tests with Tox | |
| # run: | | |
| # tox -e unit -- --durations 0 | |
| # - name: Upload coverage | |
| # uses: actions/upload-artifact@v3 | |
| # with: | |
| # name: coverage-unit | |
| # path: coverage.xml | |
| # TODO(rousik): the following could simply run docker | |
| # container mounted to specific directory. | |
| # TODO(rousik): run this on larger runners, see dev for | |
| # how to do that. | |
| ci-integration: | |
| runs-on: | |
| group: large-runner-group | |
| labels: ubuntu-22.04-4core | |
| permissions: | |
| contents: read | |
| id-token: write | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 2 | |
| # TODO(rousik): setup-python may be redundant with micromamba | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| cache: "pip" | |
| - name: Install Conda environment using mamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: test/test-environment.yml | |
| cache-environment: true | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| - defaults | |
| channel_priority: strict | |
| - run: | | |
| conda info | |
| conda list | |
| - name: Install PUDL and dependencies | |
| run: | | |
| conda info | |
| pip install . | |
| - name: Compile Zenodo datastore DOIs for cache invalidation | |
| run: | |
| grep -e '.*10\.\(5281\|5072\)/zenodo\..*' src/pudl/workspace/datastore.py | |
| | sed -e 's/",*$//g' | sed -e 's/^.*"//g' | sort > datastore-dois.txt | |
| - name: Restore Zenodo datastore from cache if possible | |
| uses: actions/cache@v3 | |
| id: cache-zenodo-datastore | |
| with: | |
| path: ${{ env.PUDL_INPUT }} | |
| key: zenodo-datastore-${{ hashFiles('datastore-dois.txt') }} | |
| - name: Make input, output and dagster dirs | |
| run: mkdir -p ${{ env.PUDL_OUTPUT }} ${{ env.PUDL_INPUT}} ${{ env.DAGSTER_HOME }} | |
| - name: Set default GCP credentials | |
| id: gcloud-auth | |
| continue-on-error: true | |
| uses: "google-github-actions/auth@v1" | |
| with: | |
| workload_identity_provider: "projects/345950277072/locations/global/workloadIdentityPools/gh-actions-pool/providers/gh-actions-provider" | |
| service_account: "tox-pytest-github-action@catalyst-cooperative-pudl.iam.gserviceaccount.com" | |
| - name: Run Fast ETL | |
| run: | | |
| conda info | |
| alembic upgrade head | |
| ferc_to_sqlite --gcs-cache-path=gs://zenodo-cache.catalyst.coop \ | |
| src/pudl/package_data/settings/etl_fast.yml | |
| pudl_etl --gcs-cache-path=gs://zenodo-cache.catalyst.coop \ | |
| src/pudl/package_data/settings/etl_fast.yml | |
| - name: Run integration tests on live data | |
| run: pytest --live-dbs test/integration | |
| # ci-integration: | |
| # runs-on: ubuntu-latest | |
| # needs: | |
| # - ci-integration-etl | |
| # permissions: | |
| # contents: read | |
| # id-token: write | |
| # strategy: | |
| # fail-fast: false | |
| # defaults: | |
| # run: | |
| # shell: bash -l {0} | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # with: | |
| # fetch-depth: 2 | |
| # | |
| # - name: Install Conda environment using mamba | |
| # uses: mamba-org/provision-with-micromamba@v16 | |
| # with: | |
| # environment-file: test/test-environment.yml | |
| # cache-env: true | |
| # channels: conda-forge,defaults | |
| # channel-priority: strict | |
| # | |
| # - name: Log environment details | |
| # run: | | |
| # conda info | |
| # conda list | |
| # conda config --show-sources | |
| # conda config --show | |
| # printenv | sort | |
| # | |
| # - name: Log SQLite3 version | |
| # run: | | |
| # which sqlite3 | |
| # sqlite3 --version | |
| # | |
| # - name: Compile Zenodo datastore DOIs for cache invalidation | |
| # run: | |
| # grep -e '.*10\.\(5281\|5072\)/zenodo\..*' src/pudl/workspace/datastore.py | |
| # | sed -e 's/",*$//g' | sed -e 's/^.*"//g' | sort > datastore-dois.txt | |
| # | |
| # - name: Restore Zenodo datastore from cache if possible | |
| # uses: actions/cache@v3 | |
| # id: cache-zenodo-datastore | |
| # with: | |
| # path: ${{ env.PUDL_INPUT }} | |
| # key: zenodo-datastore-${{ hashFiles('datastore-dois.txt') }} | |
| # | |
| # - name: Make input, output and dagster dirs | |
| # run: mkdir -p ${{ env.PUDL_OUTPUT }} ${{ env.PUDL_INPUT}} ${{ env.DAGSTER_HOME }} | |
| # | |
| # - name: List workspace contents | |
| # run: find /home/runner/pudl-work | |
| # | |
| # - name: Set default GCP credentials | |
| # id: gcloud-auth | |
| # continue-on-error: true | |
| # uses: "google-github-actions/auth@v1" | |
| # with: | |
| # workload_identity_provider: "projects/345950277072/locations/global/workloadIdentityPools/gh-actions-pool/providers/gh-actions-provider" | |
| # service_account: "tox-pytest-github-action@catalyst-cooperative-pudl.iam.gserviceaccount.com" | |
| # | |
| # - name: Run integration tests, trying to use GCS cache if possible | |
| # run: | | |
| # tox -e integration -- --gcs-cache-path=gs://zenodo-cache.catalyst.coop --durations 0 | |
| # | |
| # - name: Upload coverage | |
| # uses: actions/upload-artifact@v3 | |
| # with: | |
| # name: coverage-integration | |
| # path: coverage.xml | |
| # | |
| # - name: Log post-test Zenodo datastore contents | |
| # run: find ${{ env.PUDL_INPUT }} | |
| # ci-coverage: | |
| # runs-on: ubuntu-latest | |
| # needs: | |
| # - ci-unit | |
| # - ci-integration | |
| # - ci-static | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - name: Download coverage | |
| # id: download-unit | |
| # uses: actions/download-artifact@v3 | |
| # with: | |
| # path: coverage | |
| # - name: List downloaded files | |
| # run: | | |
| # ls -R | |
| # - name: Upload test coverage report to CodeCov | |
| # uses: codecov/codecov-action@v3 | |
| # with: | |
| # directory: coverage | |
| # ci-notify: | |
| # runs-on: ubuntu-latest | |
| # if: ${{ always() }} | |
| # needs: | |
| # - ci-unit | |
| # - ci-integration | |
| # steps: | |
| # - name: Inform the Codemonkeys | |
| # uses: 8398a7/action-slack@v3 | |
| # continue-on-error: true | |
| # with: | |
| # status: custom | |
| # fields: workflow,job,commit,repo,ref,author,took | |
| # custom_payload: | | |
| # { | |
| # username: 'action-slack', | |
| # icon_emoji: ':octocat:', | |
| # attachments: [{ | |
| # color: '${{ needs.ci-test.result }}' === 'success' ? 'good' : '${{ needs.ci-test.result }}' === 'failure' ? 'danger' : 'warning', | |
| # text: `${process.env.AS_REPO}@${process.env.AS_REF}\n ${process.env.AS_WORKFLOW} (${process.env.AS_COMMIT})\n by ${process.env.AS_AUTHOR}\n Status: ${{ needs.ci-test.result }}`, | |
| # }] | |
| # } | |
| # env: | |
| # GITHUB_TOKEN: ${{ github.token }} # required | |
| # SLACK_WEBHOOK_URL: ${{ secrets.SLACK_WEBHOOK_URL }} # required | |
| # MATRIX_CONTEXT: ${{ toJson(matrix) }} # required |