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CHANGES

1.2.2

  • Use vcfpy version 1.13.0 which fixes the problem when writing colons in the INFO field

1.2.1

  • Fix to version code

1.2.0

  • First github release
  • Includes Dockerfile
  • Travis testing for Docker image added
  • Use vcfpy rather than cyvcf2

1.1.0

  • Changed to use vcfpy. Minor loss in performance, much easier install
  • Added ability to filter using a bed file of positions
  • Bed file of positions can also include specific allele changes

1.0.1

  • Downgrade cyvcf2 to 0.9.0 to remove installation errors

1.0.0

  • First release - simply runs over a whole VCF file