diff --git a/CHANGES.md b/CHANGES.md index 8d812b2..f30eaa5 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,6 +1,6 @@ # CHANGES -## NEXT +## 3.2.1 * Added Dockerfile and docker documentation diff --git a/Dockerfile b/Dockerfile index efffa68..21ab336 100644 --- a/Dockerfile +++ b/Dockerfile @@ -37,7 +37,7 @@ FROM ubuntu:16.04 LABEL maintainer="cgphelp@sanger.ac.uk" \ uk.ac.sanger.cgp="Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute" \ - version="1.0.0" \ + version="v3.2.1" \ description="cgpPindel docker" RUN apt-get -yq update diff --git a/README.md b/README.md index 4ec8b56..8d8f22a 100644 --- a/README.md +++ b/README.md @@ -20,16 +20,15 @@ Contents: -- [cgpPindel](#cgppindel) - - [Docker, Singularity and Dockstore](#docker-singularity-and-dockstore) - - [Dependencies/Install](#dependenciesinstall) - - [Creating a release](#creating-a-release) - - [Preparation](#preparation) - - [Release process](#release-process) - - [Code changes](#code-changes) - - [Docker image](#docker-image) - - [Cutting the release](#cutting-the-release) - - [LICENCE](#licence) +* [Docker, Singularity and Dockstore](#docker-singularity-and-dockstore) +* [Dependencies/Install](#dependenciesinstall) +* [Creating a release](#creating-a-release) + * [Preparation](#preparation) + * [Release process](#release-process) + * [Code changes](#code-changes) + * [Docker image](#docker-image) + * [Cutting the release](#cutting-the-release) +* [LICENCE](#licence) @@ -37,7 +36,10 @@ Contents: There are pre-built images containing this codebase on quay.io. -* [cgpPindel][cgpPindel-git]: Contained within this repository - contains the cgpPindel package +* [cgpPindel][cgpPindel-git]: Contained within this repository + * Smallest build required to use cgpPindel + * Not linked to Dockstore (yet) + * Updated most frequently * [dockstore-cgpwxs][ds-cgpwxs-git]: Contains tools specific to WXS analysis. * [dockstore-cgpwgs][ds-cgpwgs-git]: Contains additional tools for WGS analysis. @@ -149,9 +151,6 @@ identical to a statement that reads ‘Copyright (c) 2005, 2006, 2007, 2008, [travis-develop]: https://travis-ci.org/cancerit/cgpPindel.svg?branch=dev -[quay-status]: https://quay.io/repository/wtsicgp/cgpPindel/status -[quay-repo]: https://quay.io/repository/wtsicgp/cgpPindel -[quay-builds]: https://quay.io/repository/wtsicgp/cgpPindel?tab=builds - - -[dockstore-cgpPindel]: https://dockstore.org/containers/quay.io/wtsicgp/cgpPindel +[quay-status]: https://quay.io/repository/wtsicgp/cgppindel/status +[quay-repo]: https://quay.io/repository/wtsicgp/cgppindel +[quay-builds]: https://quay.io/repository/wtsicgp/cgppindel?tab=builds diff --git a/perl/lib/Sanger/CGP/Pindel.pm b/perl/lib/Sanger/CGP/Pindel.pm index 2cee5f0..4a300ae 100644 --- a/perl/lib/Sanger/CGP/Pindel.pm +++ b/perl/lib/Sanger/CGP/Pindel.pm @@ -26,7 +26,7 @@ use strict; use Const::Fast qw(const); use base 'Exporter'; -our $VERSION = '3.2.0'; +our $VERSION = '3.2.1'; our @EXPORT = qw($VERSION); 1;