requirements.txt

# --------- others --------- #
rootutils       # standardizing the project root setup
pre-commit      # hooks for applying linters on commit
rich            # beautiful text formatting in terminal
pytest          # tests

albumentations==1.3.1
attr==0.3.2
ConfigParser==6.0.0
cryptography==41.0.7
Cython==3.0.8
dl==0.1.0
docutils==0.20.1
einops==0.7.0
HTMLParser==0.0.2
hydra-core==1.3.2
hydra-colorlog==1.2.0
hydra-optuna-sweeper==1.2.0
ipython==8.20.0
ipywidgets==8.1.1
Jinja2==3.1.2
joblib==1.3.2
keyring==24.3.0
lightning==2.1.3
lightning_utilities==0.10.1
lockfile==0.12.2
matplotlib==3.8.2
MedPy==0.4.0
monai==1.3.0
numba==0.59.0
numpy==1.26.4
omegaconf==2.3.0
opencv_python_headless==4.9.0.80
pandas==2.2.0
Pillow==10.2.0
protobuf==4.25.2
pyOpenSSL==24.0.0
pytest==8.0.0
pytorch_toolbelt==0.6.3
railroad==0.5.0
rootutils==1.0.7
scipy==1.12.0
segmentation_models_pytorch==0.3.3
sh==2.0.6
SimpleITK==2.3.1
scikit-image
Sphinx==7.2.6
tensorboardX
thread==0.1.3
tifffile==2023.12.9
timm==0.9.2
torch>=2.0.0
torchvision>=0.15.0
torchmetrics==1.3.0.post0
tornado==6.3.3
tqdm==4.65.0
trove_classifiers==2024.1.31
truststore==0.8.0
ttach==0.0.3
urllib3_secure_extra==0.1.0