From 3b81de78141f2e5638e5351f2e335a528d340f3a Mon Sep 17 00:00:00 2001 From: Anna Murphy Date: Mon, 5 Aug 2024 14:43:38 -0400 Subject: [PATCH] Add requirements --- .../classes/neur1630/requirements.pip.txt | 8 ++++++++ requirements/classes/neur1630/requirements.txt | 16 ++++++++++++++++ 2 files changed, 24 insertions(+) diff --git a/requirements/classes/neur1630/requirements.pip.txt b/requirements/classes/neur1630/requirements.pip.txt index 43719b70..3d4fcb08 100644 --- a/requirements/classes/neur1630/requirements.pip.txt +++ b/requirements/classes/neur1630/requirements.pip.txt @@ -1,2 +1,10 @@ # add class-specific classes here: +scanpy +harmonypy +rpy2 +nwbwidgets +pynapple +pybiomart +pyranges +gseapy diff --git a/requirements/classes/neur1630/requirements.txt b/requirements/classes/neur1630/requirements.txt index 7901ac0e..a9e46cc6 100644 --- a/requirements/classes/neur1630/requirements.txt +++ b/requirements/classes/neur1630/requirements.txt @@ -1,5 +1,21 @@ # add class-specific packages here: +ipywidgets +zarr +requests +aiohttp +louvain +anndata +umap-learn +loompy +scrublet +bioconductor-scran +anndata2ri +fastcluster +tqdm +pynwb +dandi + # these are the scipy base packages ( YOU PROBABLY DON'T WANT TO REMOVE THESE ) dask pandas