diff --git a/Dockerfile b/Dockerfile index 1f5b662..0d56979 100644 --- a/Dockerfile +++ b/Dockerfile @@ -53,16 +53,6 @@ RUN fix-permissions "${CONDA_DIR}" && \ USER root -# Install missing fonts -RUN cd /usr/share/fonts && \ - wget http://mirrors.ctan.org/fonts/tex-gyre/opentype/texgyrepagella-bold.otf && \ - wget http://mirrors.ctan.org/fonts/tex-gyre/opentype/texgyrepagella-bolditalic.otf && \ - wget http://mirrors.ctan.org/fonts/tex-gyre/opentype/texgyrepagella-italic.otf && \ - wget http://mirrors.ctan.org/fonts/tex-gyre/opentype/texgyrepagella-regular.otf && \ - wget https://noto-website-2.storage.googleapis.com/pkgs/NotoSansMono-unhinted.zip && \ - unzip NotoSansMono-unhinted.zip && \ - chmod +r -R /usr/share/fonts - RUN fc-cache -fsv RUN mktexlsr diff --git a/requirements/classes/neur1630/requirements.pip.txt b/requirements/classes/neur1630/requirements.pip.txt index 3d4fcb0..e920aea 100644 --- a/requirements/classes/neur1630/requirements.pip.txt +++ b/requirements/classes/neur1630/requirements.pip.txt @@ -8,3 +8,10 @@ pynapple pybiomart pyranges gseapy +gdown +rastermap +zenodo-get +cellxgene-census +ONE-api +git+https://github.com/alleninstitute/abc_atlas_access.git +PyYAML>=6.0.0 diff --git a/requirements/classes/neur1630/requirements.txt b/requirements/classes/neur1630/requirements.txt index a9e46cc..bb44b13 100644 --- a/requirements/classes/neur1630/requirements.txt +++ b/requirements/classes/neur1630/requirements.txt @@ -1,5 +1,4 @@ # add class-specific packages here: - ipywidgets zarr requests