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docker run --rm -v"$(pwd):$(pwd)" quay.io/biocontainers/islandpath:1.0.6--hdfd78af_0 islandpath NC_003210.gbk NC_GIs_output.txt
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 674.
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 677.
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 852.
Error: /NC_003210.gbk is not readable
The same issue was with my files so I tried to run example file after downloading islandpath from Github.
Any hints?
Bests,
Jan
The text was updated successfully, but these errors were encountered:
Hello,
Thank you for such great tool!
I have tried to run it via docker:
docker run --rm -v"$(pwd):$(pwd)" quay.io/biocontainers/islandpath:1.0.6--hdfd78af_0 islandpath NC_003210.gbk NC_GIs_output.txt
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 674.
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 677.
Smartmatch is experimental at /usr/local/opt/islandpath/lib/GenomeUtils.pm line 852.
Error: /NC_003210.gbk is not readable
The same issue was with my files so I tried to run example file after downloading islandpath from Github.
Any hints?
Bests,
Jan
The text was updated successfully, but these errors were encountered: