From 7c7f8d183639ee9b70c201134a3fcb6836563fb1 Mon Sep 17 00:00:00 2001
From: Adam Tyson <code@adamltyson.com>
Date: Mon, 26 Jun 2023 13:52:06 +0100
Subject: [PATCH] Update dependency (imlib -> brainglobe-utils) (#29)

---
 imio/load.py   | 5 ++++-
 imio/utils.py  | 2 +-
 pyproject.toml | 3 +--
 3 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/imio/load.py b/imio/load.py
index d54d796..c5edf68 100644
--- a/imio/load.py
+++ b/imio/load.py
@@ -7,7 +7,10 @@
 import nrrd
 import numpy as np
 import tifffile
-from imlib.general.system import get_num_processes, get_sorted_file_paths
+from brainglobe_utils.general.system import (
+    get_num_processes,
+    get_sorted_file_paths,
+)
 from natsort import natsorted
 from skimage import transform
 from tqdm import tqdm
diff --git a/imio/utils.py b/imio/utils.py
index 960b196..e6d87d2 100644
--- a/imio/utils.py
+++ b/imio/utils.py
@@ -1,7 +1,7 @@
 import logging
 
 import psutil
-from imlib.general.system import get_sorted_file_paths
+from brainglobe_utils.general.system import get_sorted_file_paths
 from scipy.ndimage import zoom
 
 import imio
diff --git a/pyproject.toml b/pyproject.toml
index deffb70..c400c3e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -18,7 +18,7 @@ classifiers = [
 ]
 requires-python = ">=3.8"
 dependencies = [
-    "imlib",
+    "brainglobe-utils[slurmio]",
     "natsort",
     "nibabel",
     "nibabel >= 2.1.0",
@@ -26,7 +26,6 @@ dependencies = [
     "psutil",
     "pynrrd",
     "scikit-image",
-    "slurmio >= 0.0.5",
     "tifffile",
     "tqdm",
 ]