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Youngflesh_et_al_XXXX_XXXX

Code for Youngflesh et al. Submitted.

This repository contains code to model bird arrival as a function of green-up and green-up as a function of time. The companion repository, which contains code to quantify bird arrival can be found here.

Associated publication:

Youngflesh, C., Socolar, J., Arab, A., Guralnick, R.P., Hurlbert, A.H., LaFrance, R., Mayor, S.J., Miller, D.A.W., Tingley, M.W. Submitted Migratory strategy drives bird sensitivity to spring green-up

Repository structure:

  • Data/ (ignored) - Datas relevant for project

    • arrival_master_<DATE> - output from 5-extract-arr-dates.R in companion repo
    • environent
      • RAW - raw green-up data
        • MCD12Q1 - MCD12Q1 product data
        • MCD12Q2 - MCD12Q2 product data
      • processed - processed green-up date
    • hex_grid_crop - study area

  • Scripts/ - scripts to run analyses

    • 1-process-gr/
      • 1a-landcover.R - create land cover mask
      • 1b-greenup.R - extract green-up data over study area
    • 2-gr-SVC.R - script to run green-up as a function of time
    • 3-arr-gr-SVC-sens.R - script to run bird arrival as a function of green-up

  • Results/ (ignored)