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The --prior-prob parameter set for DNA methylation based fine-mapping analysis #54

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qxliu686 opened this issue Apr 5, 2023 · 0 comments

qxliu686 commented Apr 5, 2023

As with TWAS, I trained DNA methylation prediction model and run the "MWAS",

Each risk region contain about 150 CpGs (which is far more than the number of genes)

Obviously it is not appropriate to use the default parameter --prior-prob as 1e-3,

How should I set --prior-prob for DNA methylation?

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