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count / freq includes all non-zero depths even if no "ALT" reads #9

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jblachly opened this issue Apr 26, 2016 · 0 comments
Open

count / freq includes all non-zero depths even if no "ALT" reads #9

jblachly opened this issue Apr 26, 2016 · 0 comments
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@jblachly
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in gVCF or multisample VCF all samples with nonzero depth get counted toward the "count" , even if they have reference only reads for a particular sample
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@jblachly @kwkroll32